RchiOBHm_Chr5g0004971

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
3277267 .. 3280910
3644 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28620

Sequence Viewer

Length: 2484 bp
ATGAATCCTACTGATATCAGCATATTAATCATCTTTCTTCTTCTCCCTCCTCCCTGTTGCATTGCCTCTGATGCCGTTACTCCAAATCAGCCCATTAGAGACGGCGACATTCTCATCTCTACCGGAAAAAAGTTTGCACTTGGCTTCTTTAGCCCAGGAAATTCTCGCAAGCGTTATGTTGGAGTTTGGTATAACAATGTTCCAAACCGAACCATTGTCTGGGTTGCAAACAGAGACAATCCAGTCAATGATACCTCTGGACTCCTAGCAGTCCAAGGAAATGGAGGTCTTGTCATCTACGGAAAGAACCAAAGTAAGCCTCTTTGGTCCGCTAGTGTTACTCTTTCTTCACCAAACAATTCTATTGCCAAGCTTTTTGATACAGGAAATCTTGTTTTGCTTGAGAATGAGAGCCAAAAGGTAATATGGCAAGGTTTCGATTACCCCTCAAATACTCTCCTTCCATATATGAAACTTGGATTCAACCGGCGGTCCGGGATGAACTGGTTGCTAACAACTTGGAAGTCCCAAGATGACCCAGGAACCGGCACCTGCTCTTTTGGGATTAGCCCAAGTGGGTTCCCACAGCTAGTTTTGCACCAAGGTGGAGCTCCCCGGTGGCGGACTCTAATCGGATTTTGGGCCGGGCAGAGATGGAAGGGTACGGTGAGTTACATCAACAATCAAGATGAGGTTTCCATAATGTATGTTCCGGCCAATGATTCAGCTTTATCAAGGACTATGCTAGCTGAATCAGGAACCTTAGAACGGTCTTCATGGAACGACCGAGTACATGAATGGAACATGTACTGGTCTGCTCCGATAGAGCGTTGTGATATTTATGGACAGTGCGGCCCAAATGGCAACTGCAACCCATACAATGTGAAAGCCATCGATTGCAATTGCTTACCCGGTTATGAACCAAAGTCACCAACTGATTGGTACTTGAGAGATGGATCAGGTGGGTGCTTAAGGAGAGAAGGAGTGTCAATGTGTGGAAATGGGGAAGGATTTGTAAAGGTTGAGCGTGTAAAAATACCAGACTTGTCGAAGGCATCTTTCGACATGAACTTGAATTTGAAGGAATGTGAGCAAGTGTGCTTGAGAAATTGTTCTTGCACGGCATACTCGAGTTCCGATGAGGGCAGCGGATGTGTGACTTGGCAAGGGGATTTGATGGACATAAGAACGCTTCCTGATGCTGGTCAAGTATTATATGCAAGAGTCGATGCAATTGTTTTAGCTCAATATGTGAAGAAGTCGGATGATTCTATTAGCAAGAAGCAGAAAGTAGCAGTTTCACTAACATCTGTTCTAGTGCTCTTTCTTGTGTTTTCTCTTTTGGTTTGGTTACTAAGGAGGAAGAGAAAAGGTAAAAGGAGACAAAATGAATATCTATTTGGACATAGTACAGGGTCAACGTACTTGGGGCAATCTAGCGGTAGAACAGATGCTGATGAAACTAGGATTAACCCAGATCTACCATTCTTTGATCTAACAACCGTAGCAACAGCAACAAATAATTTCTCTATTGAAAACAAGCTTGGAACAGGTGGTTTTGGCTCTGTCTATAAGGGTGTGCTTTCTAATGGAAAGGAAATAGCAGTCAAAAGACTATCGCAGAATTCAGGTCAAGGAACTGAAGAATTCAAGAATGAAGTTGTGTTGATTTCAAAACTCCAACACAGGAACCTTGTCAGGATTTTAGGTTGTTGTGTTCAAGATGAAGAGAAGATGATAATCTATGAATACTTGCCAAACAAAAGTTTAGACTTCTTCATTTTTAATGAATCCAACAGAGTTTATTTAGATTGGACCAGACGCTTTGAGATAATTTGTGGAATTGTTAGAGGGATCTTGTATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCCAGCAATGTTCTACTAGACGCTTCTATGAATCCCAAAATTGCAGATTTTGGTATGGCTAGAATATTTAGGGGAGATCAAAATGAAGCAAATACAAATCGGGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGGAGGACGGTTTTCAGTAAAATCAGATGTGTATAGTTTTGGGGTTTTACTACTAGAAATCATTACAGGCAGAAAGAACAGAGTTTATTACCAAGAGGAATCTCCCGACTCAAATTTGGTCGAACATGTTTGGAACTTGTGGCGAGAAAGTAATGCCTTGGAAGTCGTTGATTCATCTCTGGGTGAATCATACCCCACGAATGAAGTTCTGAGATGTATCCAAATTGCTCTCTTGTGTGTGCAAGAGTATGCAATTGACCGGCCAACCATGTCGGCAGTTCTTAACATGTTAGGTAATGATGCAACACTTCCTTCACCTAGACAACCTGCATTTCTATTGCAGAGAAGTGCCACTAGTACTGGAGACTCATCAACCCAAGATGGAGCTAATTCTGTAAATGATGTGACATGTACTATGGTAGAAGCTCGCTAG

Protein Analysis

827

Amino Acids

92.19

Weight (kDa)

7.7

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 175 2.1e-33 D-mannose binding lectin
S_locus_glycop PF00954 223 - 310 2.6e-21 S-locus glycoprotein domain
PAN_2 PF08276 332 - 395 6.6e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 510 - 781 7e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 510 - 779 2.4e-44 Protein kinase domain
DUF3403 PF11883 783 - 827 5.2e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 560
AasI GACNNNNNNGTC 1 cut(s) 242
Acc36I ACCTGC 2 cut(s) 560, 2386
AccB1I GGYRCC 1 cut(s) 548
AccB7I CCANNNNNTGG 1 cut(s) 219
AciI CCGC 6 cut(s) 330, 490, 622, 852, 1149, 1440
AclWI GGATC 2 cut(s) 964, 1862
AcoI YGGCCR 2 cut(s) 714, 2312
AcsI RAATTY 5 cut(s) 160, 1075, 1624, 1646, 2164
AcuI CTGAAG 1 cut(s) 1662
AfaI GTAC 8 cut(s) 664, 792, 809, 944, 1411, 1424, 2410, 2464
AfiI CCNNNNNNNGG 5 cut(s) 219, 545, 621, 768, 1202
AflII CTTAAG 1 cut(s) 970
AflIII ACRYGT 4 cut(s) 804, 2176, 2337, 2459
AgsI TTSAA 8 cut(s) 484, 1075, 1081, 1535, 1651, 1674, 1721, 1878
AhlI ACTAGT 1 cut(s) 2405
AjnI CCWGG 2 cut(s) 154, 538
AjuI GAANNNNNNNTTGG 4 cut(s) 1383, 1415, 1527, 1559
AleI CACNNNNGTG 1 cut(s) 603
AluBI AGCT 9 cut(s) 373, 589, 611, 728, 749, 1244, 1543, 2438, 2477
AluI AGCT 9 cut(s) 373, 589, 611, 728, 749, 1244, 1543, 2438, 2477
Alw21I GWGCWC 2 cut(s) 613, 1323
Alw26I GTCTC 4 cut(s) 93, 228, 1375, 2409
AlwI GGATC 2 cut(s) 964, 1862
AlwNI CAGNNNCTG 1 cut(s) 1454
Ama87I CYCGRG 1 cut(s) 1129
AoxI GGCC 5 cut(s) 642, 714, 853, 1908, 2312
ApeKI GCWGC 1 cut(s) 1146
ApoI RAATTY 5 cut(s) 160, 1075, 1624, 1646, 2164
AseI ATTAAT 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 1111
AspS9I GGNCC 5 cut(s) 327, 492, 642, 854, 1815
AsuC2I CCSGG 4 cut(s) 496, 616, 646, 912
AsuHPI GGTGA 6 cut(s) 342, 679, 921, 2028, 2246, 2358
AsuNHI GCTAGC 1 cut(s) 745
AvaI CYCGRG 1 cut(s) 1129
AvaII GGWCC 3 cut(s) 327, 492, 1815
BanI GGYRCC 1 cut(s) 548
BanII GRGCYC 1 cut(s) 613
BbsI GAAGAC 1 cut(s) 765
Bbv12I GWGCWC 2 cut(s) 613, 1323
BbvI GCAGC 1 cut(s) 1158
BccI CCATC 5 cut(s) 648, 899, 947, 1171, 2426
BceAI ACGGC 3 cut(s) 59, 118, 1137
BciT130I CCWGG 2 cut(s) 156, 540
BciVI GTATCC 1 cut(s) 2279
BcnI CCSGG 4 cut(s) 496, 616, 646, 912
BcoDI GTCTC 4 cut(s) 93, 228, 1375, 2409
BcuI ACTAGT 1 cut(s) 2405
BfrI CTTAAG 1 cut(s) 970
BfuAI ACCTGC 2 cut(s) 560, 2386
BfuI GTATCC 1 cut(s) 2279
BglI GCCNNNNNGGC 1 cut(s) 861
BglII AGATCT 2 cut(s) 1477, 1900
BisI GCNGC 2 cut(s) 853, 1147
BlsI GCNGC 2 cut(s) 854, 1148
BmcAI AGTACT 1 cut(s) 2410
Bme1390I CCNGG 6 cut(s) 156, 496, 540, 616, 646, 912
Bme18I GGWCC 3 cut(s) 327, 492, 1815
BmeT110I CYCGRG 1 cut(s) 1129
BmgT120I GGNCC 5 cut(s) 327, 492, 642, 854, 1815
BmiI GGNNCC 5 cut(s) 544, 550, 581, 760, 1691
BmrFI CCNGG 6 cut(s) 156, 496, 540, 616, 646, 912
BmsI GCATC 6 cut(s) 61, 1064, 1189, 1219, 1441, 2341
BmtI GCTAGC 1 cut(s) 749
BpiI GAAGAC 1 cut(s) 765
BpmI CTGGAG 1 cut(s) 2433
BpuEI CTTGAG 3 cut(s) 422, 967, 1123
BpuMI CCSGG 4 cut(s) 496, 616, 646, 912
Bsa29I ATCGAT 1 cut(s) 894
BsaBI GATNNNNATC 1 cut(s) 1739
BsaJI CCNNGG 6 cut(s) 154, 274, 538, 601, 614, 2208
BsaWI WCCGGW 1 cut(s) 122
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 5 cut(s) 219, 545, 621, 768, 1202
Bse118I RCCGGY 3 cut(s) 486, 545, 2310
Bse1I ACTGG 4 cut(s) 242, 509, 815, 2416
Bse3DI GCAATG 3 cut(s) 60, 1921, 2055
Bse8I GATNNNNATC 1 cut(s) 1739
BseBI CCWGG 2 cut(s) 156, 540
BseCI ATCGAT 1 cut(s) 894
BseDI CCNNGG 6 cut(s) 154, 274, 538, 601, 614, 2208
BseGI GGATG 4 cut(s) 504, 1157, 1270, 1890
BseJI GATNNNNATC 1 cut(s) 1739
BseLI CCNNNNNNNGG 5 cut(s) 219, 545, 621, 768, 1202
BseMI GCAATG 3 cut(s) 60, 1921, 2055
BseMII CTCAG 1 cut(s) 2252
BseNI ACTGG 4 cut(s) 242, 509, 815, 2416
BseRI GAGGAG 1 cut(s) 39
BseXI GCAGC 1 cut(s) 1158
Bsh1285I CGRYCG 1 cut(s) 787
BshFI GGCC 5 cut(s) 644, 716, 855, 1910, 2314
BshNI GGYRCC 1 cut(s) 548
BshVI ATCGAT 1 cut(s) 894
BsiEI CGRYCG 1 cut(s) 787
BsiHKAI GWGCWC 2 cut(s) 613, 1323
BsiHKCI CYCGRG 1 cut(s) 1129
BsiSI CCGG 9 cut(s) 123, 487, 495, 546, 616, 645, 713, 912, 2311
BslFI GGGAC 1 cut(s) 511
BslI CCNNNNNNNGG 5 cut(s) 219, 545, 621, 768, 1202
BsmAI GTCTC 4 cut(s) 93, 228, 1375, 2409
BsmBI CGTCTC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 511
BsnI GGCC 5 cut(s) 644, 716, 855, 1910, 2314
BsoBI CYCGRG 1 cut(s) 1129
Bsp1286I GDGCHC 2 cut(s) 613, 1323
Bsp143I GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
BspACI CCGC 6 cut(s) 330, 490, 622, 852, 1149, 1440
BspANI GGCC 5 cut(s) 644, 716, 855, 1910, 2314
BspCNI CTCAG 1 cut(s) 2253
BspDI ATCGAT 1 cut(s) 894
BspLI GGNNCC 5 cut(s) 544, 550, 581, 760, 1691
BspMI ACCTGC 2 cut(s) 560, 2386
BspOI GCTAGC 1 cut(s) 749
BspPI GGATC 2 cut(s) 964, 1862
BspT107I GGYRCC 1 cut(s) 548
BspTI CTTAAG 1 cut(s) 970
BsrDI GCAATG 3 cut(s) 60, 1921, 2055
BsrFI RCCGGY 3 cut(s) 486, 545, 2310
BsrI ACTGG 4 cut(s) 242, 509, 815, 2416
BssAI RCCGGY 3 cut(s) 486, 545, 2310
BssECI CCNNGG 6 cut(s) 154, 274, 538, 601, 614, 2208
BssMI GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
BssT1I CCWWGG 3 cut(s) 274, 601, 2208
Bst2UI CCWGG 2 cut(s) 156, 540
Bst4CI ACNGT 5 cut(s) 667, 771, 849, 1504, 2061
Bst6I CTCTTC 2 cut(s) 1358, 1722
BstAFI CTTAAG 1 cut(s) 970
BstC8I GCNNGC 4 cut(s) 170, 747, 1912, 2479
BstDEI CTNAG 3 cut(s) 763, 1355, 2261
BstF5I GGATG 4 cut(s) 504, 1157, 1270, 1890
BstKTI GATC 6 cut(s) 959, 1480, 1495, 1857, 1903, 1987
BstMAI GTCTC 4 cut(s) 93, 228, 1375, 2409
BstMBI GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
BstMCI CGRYCG 1 cut(s) 787
BstMWI GCNNNNNNNGC 4 cut(s) 71, 150, 595, 861
BstNI CCWGG 2 cut(s) 156, 540
BstNSI RCATGY 4 cut(s) 808, 2180, 2341, 2463
BstSCI CCNGG 6 cut(s) 154, 494, 538, 614, 644, 910
BstV1I GCAGC 1 cut(s) 1158
BstV2I GAAGAC 1 cut(s) 765
BstX2I RGATCY 3 cut(s) 1477, 1854, 1900
BstXI CCANNNNNNTGG 2 cut(s) 281, 939
BstYI RGATCY 3 cut(s) 1477, 1854, 1900
Bsu15I ATCGAT 1 cut(s) 894
BsuI GTATCC 1 cut(s) 2279
BsuRI GGCC 5 cut(s) 644, 716, 855, 1910, 2314
BsuTUI ATCGAT 1 cut(s) 894
BtsCI GGATG 4 cut(s) 504, 1157, 1270, 1890
BtsIMutI CAGTG 1 cut(s) 854
BveI ACCTGC 2 cut(s) 560, 2386
Cac8I GCNNGC 4 cut(s) 170, 747, 1912, 2479
CaiI CAGNNNCTG 1 cut(s) 1454
Cfr10I RCCGGY 3 cut(s) 486, 545, 2310
Cfr13I GGNCC 5 cut(s) 327, 492, 642, 854, 1815
ClaI ATCGAT 1 cut(s) 894
CpoI CGGWCCG 1 cut(s) 492
CseI GACGC 2 cut(s) 1830, 1937
Csp6I GTAC 8 cut(s) 663, 791, 808, 943, 1410, 1423, 2409, 2463
CspCI CAANNNNNGTGG 2 cut(s) 1992, 2027
CspI CGGWCCG 1 cut(s) 492
CviAII CATG 8 cut(s) 777, 794, 805, 1066, 2177, 2320, 2338, 2460
CviQI GTAC 8 cut(s) 663, 791, 808, 943, 1410, 1423, 2409, 2463
DdeI CTNAG 3 cut(s) 763, 1355, 2261
DpnI GATC 6 cut(s) 958, 1479, 1494, 1856, 1902, 1986
DpnII GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 2 cut(s) 714, 2312
Eam1104I CTCTTC 2 cut(s) 1358, 1722
EarI CTCTTC 2 cut(s) 1358, 1722
EciI GGCGGA 1 cut(s) 637
Ecl136II GAGCTC 1 cut(s) 611
Eco130I CCWWGG 3 cut(s) 274, 601, 2208
Eco24I GRGCYC 1 cut(s) 613
Eco32I GATATC 1 cut(s) 16
Eco47I GGWCC 3 cut(s) 327, 492, 1815
Eco53kI GAGCTC 1 cut(s) 611
Eco57I CTGAAG 1 cut(s) 1662
Eco88I CYCGRG 1 cut(s) 1129
EcoICRI GAGCTC 1 cut(s) 611
EcoRI GAATTC 2 cut(s) 1624, 1646
EcoRII CCWGG 2 cut(s) 154, 538
EcoRV GATATC 1 cut(s) 16
EcoT14I CCWWGG 3 cut(s) 274, 601, 2208
EcoT38I GRGCYC 1 cut(s) 613
ErhI CCWWGG 3 cut(s) 274, 601, 2208
Esp3I CGTCTC 1 cut(s) 93
FaeI CATG 8 cut(s) 780, 797, 808, 1069, 2180, 2323, 2341, 2463
FaqI GGGAC 1 cut(s) 511
FatI CATG 8 cut(s) 776, 793, 804, 1065, 2176, 2319, 2337, 2459
FauNDI CATATG 1 cut(s) 2023
Fnu4HI GCNGC 2 cut(s) 853, 1147
FokI GGATG 4 cut(s) 511, 1164, 1277, 1877
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 2 cut(s) 853, 1147
GluI GCNGC 2 cut(s) 853, 1147
GsuI CTGGAG 1 cut(s) 2433
HaeIII GGCC 5 cut(s) 644, 716, 855, 1910, 2314
HapII CCGG 9 cut(s) 123, 487, 495, 546, 616, 645, 713, 912, 2311
HgaI GACGC 2 cut(s) 1830, 1937
Hin1II CATG 8 cut(s) 780, 797, 808, 1069, 2180, 2323, 2341, 2463
HincII GTYRAC 1 cut(s) 1419
HindII GTYRAC 1 cut(s) 1419
HindIII AAGCTT 2 cut(s) 371, 1541
HpaII CCGG 9 cut(s) 123, 487, 495, 546, 616, 645, 713, 912, 2311
HphI GGTGA 6 cut(s) 342, 679, 921, 2028, 2246, 2358
Hpy166II GTNNAC 1 cut(s) 1419
Hpy188I TCNGA 7 cut(s) 70, 635, 822, 1138, 1264, 2077, 2262
Hpy8I GTNNAC 1 cut(s) 1419
HpyAV CCTTC 7 cut(s) 470, 652, 974, 1001, 1045, 1075, 2373
HpyCH4III ACNGT 5 cut(s) 667, 771, 849, 1504, 2061
HpyCH4IV ACGT 1 cut(s) 1421
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 150, 595, 861
HpyF3I CTNAG 3 cut(s) 763, 1355, 2261
HpySE526I ACGT 1 cut(s) 1421
Hsp92II CATG 8 cut(s) 780, 797, 808, 1069, 2180, 2323, 2341, 2463
Kzo9I GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
LmnI GCTCC 4 cut(s) 608, 616, 823, 2435
Lsp1109I GCAGC 1 cut(s) 1158
LweI GCATC 6 cut(s) 61, 1064, 1189, 1219, 1441, 2341
MaeII ACGT 1 cut(s) 1421
MaeIII GTNAC 8 cut(s) 76, 337, 671, 927, 1156, 1350, 2034, 2455
MalI GATC 6 cut(s) 958, 1479, 1494, 1856, 1902, 1986
MboI GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
MfeI CAATTG 3 cut(s) 901, 1233, 2304
MflI RGATCY 3 cut(s) 1477, 1854, 1900
MhlI GDGCHC 2 cut(s) 613, 1323
MlyI GAGTC 5 cut(s) 255, 619, 1233, 2153, 2411
MmeI TCCRAC 5 cut(s) 160, 1242, 1705, 1818, 1996
MroXI GAANNNNTTC 1 cut(s) 1111
MseI TTAA 6 cut(s) 26, 971, 1470, 1785, 1883, 2334
MslI CAYNNNNRTG 1 cut(s) 603
MspA1I CMGCKG 1 cut(s) 1149
MspCI CTTAAG 1 cut(s) 970
MspI CCGG 9 cut(s) 123, 487, 495, 546, 616, 645, 713, 912, 2311
MspR9I CCNGG 6 cut(s) 156, 496, 540, 616, 646, 912
MunI CAATTG 3 cut(s) 901, 1233, 2304
MvaI CCWGG 2 cut(s) 156, 540
MwoI GCNNNNNNNGC 4 cut(s) 71, 150, 595, 861
NciI CCSGG 4 cut(s) 496, 616, 646, 912
NdeI CATATG 1 cut(s) 2023
NdeII GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
NheI GCTAGC 1 cut(s) 745
NlaIII CATG 8 cut(s) 780, 797, 808, 1069, 2180, 2323, 2341, 2463
NlaIV GGNNCC 5 cut(s) 544, 550, 581, 760, 1691
NmuCI GTSAC 4 cut(s) 927, 1156, 2034, 2455
NspI RCATGY 4 cut(s) 808, 2180, 2341, 2463
OliI CACNNNNGTG 1 cut(s) 603
PaeR7I CTCGAG 1 cut(s) 1129
PaqCI CACCTGC 1 cut(s) 560
PciI ACATGT 4 cut(s) 804, 2176, 2337, 2459
PcsI WCGNNNNNNNCGW 1 cut(s) 1127
PdmI GAANNNNTTC 1 cut(s) 1111
PflMI CCANNNNNTGG 1 cut(s) 219
PfoI TCCNGGA 1 cut(s) 494
PkrI GCNGC 2 cut(s) 854, 1148
PleI GAGTC 5 cut(s) 255, 619, 1232, 2153, 2411
PpsI GAGTC 5 cut(s) 255, 619, 1232, 2153, 2411
PscI ACATGT 4 cut(s) 804, 2176, 2337, 2459
PshBI ATTAAT 1 cut(s) 26
Psp124BI GAGCTC 1 cut(s) 613
Psp6I CCWGG 2 cut(s) 154, 538
PspGI CCWGG 2 cut(s) 154, 538
PspN4I GGNNCC 5 cut(s) 544, 550, 581, 760, 1691
PspPI GGNCC 5 cut(s) 327, 492, 642, 854, 1815
PspXI VCTCGAGB 1 cut(s) 1129
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 3 cut(s) 1477, 1854, 1900
RsaI GTAC 8 cut(s) 664, 792, 809, 944, 1411, 1424, 2410, 2464
RsaNI GTAC 8 cut(s) 663, 791, 808, 943, 1410, 1423, 2409, 2463
RseI CAYNNNNRTG 1 cut(s) 603
Rsr2I CGGWCCG 1 cut(s) 492
RsrII CGGWCCG 1 cut(s) 492
SacI GAGCTC 1 cut(s) 613
SaqAI TTAA 6 cut(s) 26, 971, 1470, 1785, 1883, 2334
SatI GCNGC 2 cut(s) 853, 1147
Sau3AI GATC 6 cut(s) 956, 1477, 1492, 1854, 1900, 1984
Sau96I GGNCC 5 cut(s) 327, 492, 642, 854, 1815
ScaI AGTACT 1 cut(s) 2410
SchI GAGTC 5 cut(s) 255, 619, 1233, 2153, 2411
ScrFI CCNGG 6 cut(s) 156, 496, 540, 616, 646, 912
SduI GDGCHC 2 cut(s) 613, 1323
SfaNI GCATC 6 cut(s) 61, 1064, 1189, 1219, 1441, 2341
Sfr274I CTCGAG 1 cut(s) 1129
SinI GGWCC 3 cut(s) 327, 492, 1815
SlaI CTCGAG 1 cut(s) 1129
SmiMI CAYNNNNRTG 1 cut(s) 603
SmlI CTYRAG 5 cut(s) 401, 946, 970, 1102, 1129
SmoI CTYRAG 5 cut(s) 401, 946, 970, 1102, 1129
SpeI ACTAGT 1 cut(s) 2405
SsiI CCGC 6 cut(s) 330, 490, 622, 852, 1149, 1440
SspI AATATT 1 cut(s) 1974
SstI GAGCTC 1 cut(s) 613
StyD4I CCNGG 6 cut(s) 154, 494, 538, 614, 644, 910
StyI CCWWGG 3 cut(s) 274, 601, 2208
TaaI ACNGT 5 cut(s) 667, 771, 849, 1504, 2061
TaiI ACGT 1 cut(s) 1424
TaqI TCGA 7 cut(s) 438, 894, 1049, 1062, 1130, 1227, 2172
TaqII GACCGA 1 cut(s) 801
TatI WGTACW 5 cut(s) 790, 807, 1409, 2408, 2462
TauI GCSGC 1 cut(s) 855
Tru1I TTAA 6 cut(s) 26, 971, 1470, 1785, 1883, 2334
Tru9I TTAA 6 cut(s) 26, 971, 1470, 1785, 1883, 2334
TscAI CASTG 1 cut(s) 854
TseFI GTSAC 4 cut(s) 927, 1156, 2034, 2455
TseI GCWGC 1 cut(s) 1146
Tsp45I GTSAC 4 cut(s) 927, 1156, 2034, 2455
TspGWI ACGGA 1 cut(s) 315
TspRI CASTG 1 cut(s) 854
Van91I CCANNNNNTGG 1 cut(s) 219
Vha464I CTTAAG 1 cut(s) 970
VpaK11BI GGWCC 3 cut(s) 327, 492, 1815
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 5 cut(s) 160, 1075, 1624, 1646, 2164
XceI RCATGY 4 cut(s) 808, 2180, 2341, 2463
XhoI CTCGAG 1 cut(s) 1129
XmnI GAANNNNTTC 1 cut(s) 1111
ZrmI AGTACT 1 cut(s) 2410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.