RLG00000023265

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000099
Physical Location & Seq
Forward (+)
20884273 .. 20888129
3857 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023265

Sequence Viewer

Length: 2412 bp
ATGAGTTTTAGTAGCGAAGTGTTTATCCAGATATTGCTCATCTTCTTTCTTCTCCCCTCTAGCAGCATTTGCCAGCTTCCGCTTGACGCCCTTACGCCAAACCAACCCATCCGAGACGGGGACGTTTTAGTCTCTAGAAGGAATATCTTTGCACTAGGAGACCACCCAGTCAATGATTCCTCTGGAGTGCTATCGACTAATGGTGATGGAGGCCTTGTCATACACGGAATGCGCCGAAGTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTATCTAAACAATTTCACAGCCAAGCTTCTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAAGTTTTGATCATCCCTCAGATACTTTGATTTCCACTATGAAGCTGGGCCTAAACCGGCGGTCCGAATTAGACTCGTTCCTAACATCTTGGAAGTCAAAAGATGACCCTGGAACCGGGAGCTGTACATTTAGGATAGACACCAAGGGGGTTCCGCAGTTGTATATGTACAAGGGTGGACGCCCATTGTGGCGGGGCGGTCCTTGGATGGGGGACAGATGGAGTGGTCTACCCGACTTTACCACTAACAGTGGAATCAAAAATTTATTTGTCAACAATGAAGACGAGATATCCTTCATGTATGCTATTGCTAACGACTCCATGTTCACAAGGGGGGTGGTAGATGAATCAGGAATATTTCAACGGTCGGTGTGGAATGATCACGAAAACCAATGGATCAATTTGGTTCCCTTCCCGAATGAGTGGTGTGATATCTACGGACAGTGCGGTCCAAATAGTAACTGTGACCCATCCAAGAACTATAAGTTCGCTTGCACATGCCTACCCGGGTTCGAACCCAAATCGCCTCATGACTGGTTTTCGAGTGTTGGGTTGGGTGGGTGCATTAGGAAAGCGGGAGCGTCCGCATGTCGGAATGGAGAAGGGTTCGAGAAGGTGGCGTTGGTAAAGGTACCAGACTCGTCTACAGCACGTGTGAATATGAATTTGAGTTTGAAAGCTTGTGAGCTAGAGTGTTTGATGGATTGTTCTTGCACTGCTTACACAAGTGCGGATTATCGGGGAGGTGGGATGGGGTGCATGACATGGCACGGGAACTTGATGGACACAAGGACTTTCTCCAACGTTGGTCAAGATTTATATGTTCGAGTTGATGCAATTTCTTTAGCTCAATATGCAAAATCAAGCGGTTCTCTTAGCAAGAAGGCAACGCTGGCAATTTCACTAGGATCTGTTGCAGTTTTCCTTCTCTTACTTACCCTTTATTCGTTGGTAAGGATGAAGATGAAAGGCAAGCGTAGACGAAATAAATATTCATTTATACTTACCGCCGGGTCAACCTACTTCAAAGAATCTTCTGGTGGAACAGCTTTTGATGATAGTAGAATAAACTCAGAGTTAGCATTCTTTCATCTAAAAACAATAGCAAACGCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGCATACTTTACGGTGGAAAGGAAATAGCGGTAAAAAGGCTATCCAAATTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAGCTCCAACACAGAAACCTTGTCAGGATTTTAGGTTGTTGTGTTGAAGATGAAGAGAAGATCCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACTAAGCGAGCACTTTTAAATTGGACAAAACGTTTCGAGATTATCTTTGGGATTGCTAGAGGGGTATTATATCTTCACGAAGATTCAAGATTAAGAATTGTCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGGACCCAAAAATTGCAGATTTTGGTATGGCTAGAATATTTAGAGAAGATCAAAGTGAAGCGAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCTCCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGATGTATATAGTTTTGGTGTTTTACTGCTGGAAATGATTATTGGCAAAAAGAATGCTGGTTATTACCATGAGGAGTATCCTAATTCAAATTTGGTTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCTGTGGAAGTCATTGATTCATCTATAGGTGAATCTTACCTTGTTGGTGAAGTTATAAGGTGCATTCAAATCGCGCTCTTGTGTGTGCAAGAATTTGCAACTGACCGGCCAACCATGTCAGCAGTTGTTTCCATGCTAGGTAATGATGTAGCTCTTCCTTCACCAAGGCAACCAGCATTTTTACTAAAGAGAACGAGTCCTAGTAGAGACCCATCCAGCAACGAAGGAGCTAATTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

804

Amino Acids

89.28

Weight (kDa)

6.5

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 54 - 150 1.5e-24 D-mannose binding lectin
S_locus_glycop PF00954 182 - 293 2.9e-26 S-locus glycoprotein domain
PAN_2 PF08276 315 - 381 1.4e-19 PAN-like domain
Pkinase PF00069 508 - 688 5.5e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 509 - 757 1.1e-40 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 760 - 803 1.4e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2192
AasI GACNNNNNNGTC 3 cut(s) 128, 167, 801
Acc65I GGTACC 1 cut(s) 985
AccB1I GGYRCC 1 cut(s) 985
AccI GTMKAC 3 cut(s) 583, 998, 1333
AccII CGCG 1 cut(s) 2210
AccIII TCCGGA 1 cut(s) 1969
AclI AACGTT 3 cut(s) 261, 1158, 1753
AclWI GGATC 3 cut(s) 758, 1270, 1660
AcoI YGGCCR 2 cut(s) 1561, 2243
AcsI RAATTY 5 cut(s) 616, 1018, 1553, 2095, 2228
AcvI CACGTG 1 cut(s) 1007
AcyI GRCGYC 2 cut(s) 87, 535
AfaI GTAC 5 cut(s) 241, 481, 524, 987, 2392
AfiI CCNNNNNNNGG 5 cut(s) 118, 249, 470, 563, 945
AflIII ACRYGT 3 cut(s) 1006, 2107, 2387
AjnI CCWGG 1 cut(s) 463
AjuI GAANNNNNNNTTGG 6 cut(s) 959, 991, 1478, 1510, 2031, 2063
Alw21I GWGCWC 1 cut(s) 1735
Alw26I GTCTC 5 cut(s) 108, 136, 153, 1971, 2337
AlwI GGATC 3 cut(s) 758, 1270, 1660
Ama87I CYCGRG 1 cut(s) 860
Aor13HI TCCGGA 1 cut(s) 1969
AoxI GGCC 5 cut(s) 211, 403, 1561, 1839, 2243
ApeKI GCWGC 1 cut(s) 63
ApoI RAATTY 5 cut(s) 616, 1018, 1553, 2095, 2228
Asp700I GAANNNNTTC 1 cut(s) 1593
Asp718I GGTACC 1 cut(s) 985
AspLEI GCGC 2 cut(s) 234, 2212
AspS9I GGNCC 6 cut(s) 252, 403, 417, 554, 803, 1870
AsuC2I CCSGG 4 cut(s) 472, 861, 862, 1366
AsuHPI GGTGA 4 cut(s) 215, 2177, 2195, 2289
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 1 cut(s) 860
AvaII GGWCC 5 cut(s) 252, 417, 554, 803, 1870
BalI TGGCCA 1 cut(s) 1563
BanI GGYRCC 1 cut(s) 985
BarI GAAGNNNNNNTAC 2 cut(s) 1779, 1811
BbrPI CACGTG 1 cut(s) 1007
BbsI GAAGAC 1 cut(s) 642
Bbv12I GWGCWC 1 cut(s) 1735
BbvI GCAGC 1 cut(s) 75
BccI CCATC 9 cut(s) 116, 200, 556, 567, 832, 1048, 1099, 1129, 2356
BcgI CGANNNNNNTGC 2 cut(s) 2188, 2222
BciT130I CCWGG 1 cut(s) 465
BciVI GTATCC 2 cut(s) 298, 2094
BclI TGATCA 2 cut(s) 364, 733
BcnI CCSGG 4 cut(s) 472, 861, 862, 1366
BcoDI GTCTC 5 cut(s) 108, 136, 153, 1971, 2337
BfaI CTAG 9 cut(s) 60, 135, 155, 1043, 1259, 1779, 1899, 2273, 2337
BfmI CTRYAG 2 cut(s) 999, 2160
BfuI GTATCC 2 cut(s) 298, 2094
BglII AGATCT 1 cut(s) 1831
BisI GCNGC 1 cut(s) 64
BlsI GCNGC 1 cut(s) 65
Bme1390I CCNGG 5 cut(s) 465, 472, 861, 862, 1366
Bme18I GGWCC 5 cut(s) 252, 417, 554, 803, 1870
BmeT110I CYCGRG 1 cut(s) 860
BmgT120I GGNCC 6 cut(s) 252, 403, 417, 554, 803, 1870
BmiI GGNNCC 5 cut(s) 469, 507, 762, 987, 1872
BmrFI CCNGG 5 cut(s) 465, 472, 861, 862, 1366
BmrI ACTGGG 1 cut(s) 161
BmsI GCATC 1 cut(s) 1177
BmuI ACTGGG 1 cut(s) 161
BpiI GAAGAC 1 cut(s) 642
BpmI CTGGAG 1 cut(s) 204
Bpu14I TTCGAA 1 cut(s) 867
BpuEI CTTGAG 1 cut(s) 347
BpuMI CCSGG 4 cut(s) 472, 861, 862, 1366
BsaAI YACGTR 1 cut(s) 1007
BsaBI GATNNNNATC 1 cut(s) 1670
BsaHI GRCGYC 2 cut(s) 87, 535
BsaI GGTCTC 2 cut(s) 153, 2337
BsaJI CCNNGG 6 cut(s) 463, 498, 557, 860, 1564, 2300
BsaWI WCCGGW 1 cut(s) 1969
BsaXI ACNNNNNCTCC 4 cut(s) 201, 231, 1462, 1492
Bsc4I CCNNNNNNNGG 5 cut(s) 118, 249, 470, 563, 945
Bse118I RCCGGY 2 cut(s) 411, 2241
Bse1I ACTGG 2 cut(s) 167, 893
Bse3DI GCAATG 2 cut(s) 1852, 1986
Bse8I GATNNNNATC 1 cut(s) 1670
BseAI TCCGGA 1 cut(s) 1969
BseBI CCWGG 1 cut(s) 465
BseDI CCNNGG 6 cut(s) 463, 498, 557, 860, 1564, 2300
BseGI GGATG 7 cut(s) 108, 367, 567, 824, 1110, 1317, 2348
BseJI GATNNNNATC 1 cut(s) 1670
BseLI CCNNNNNNNGG 5 cut(s) 118, 249, 470, 563, 945
BseMI GCAATG 2 cut(s) 1852, 1986
BseMII CTCAG 2 cut(s) 387, 1440
BseNI ACTGG 2 cut(s) 167, 893
BseRI GAGGAG 1 cut(s) 2093
BseXI GCAGC 1 cut(s) 75
BseYI CCCAGC 1 cut(s) 400
Bsh1236I CGCG 1 cut(s) 2210
Bsh1285I CGRYCG 1 cut(s) 722
BshFI GGCC 5 cut(s) 213, 405, 1563, 1841, 2245
BshNI GGYRCC 1 cut(s) 985
BsiEI CGRYCG 1 cut(s) 722
BsiHKAI GWGCWC 1 cut(s) 1735
BsiHKCI CYCGRG 1 cut(s) 860
BsiSI CCGG 6 cut(s) 412, 471, 861, 1365, 1970, 2242
BslFI GGGAC 2 cut(s) 134, 581
BslI CCNNNNNNNGG 5 cut(s) 118, 249, 470, 563, 945
BsmAI GTCTC 5 cut(s) 108, 136, 153, 1971, 2337
BsmBI CGTCTC 1 cut(s) 108
BsmFI GGGAC 2 cut(s) 134, 581
BsmI GAATGC 4 cut(s) 234, 1436, 2065, 2199
BsnI GGCC 5 cut(s) 213, 405, 1563, 1841, 2245
Bso31I GGTCTC 2 cut(s) 153, 2337
BsoBI CYCGRG 1 cut(s) 860
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 1 cut(s) 1735
Bsp13I TCCGGA 1 cut(s) 1969
Bsp1407I TGTACA 3 cut(s) 479, 522, 2390
Bsp143I GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
BspANI GGCC 5 cut(s) 213, 405, 1563, 1841, 2245
BspCNI CTCAG 2 cut(s) 386, 1439
BspEI TCCGGA 1 cut(s) 1969
BspFNI CGCG 1 cut(s) 2210
BspHI TCATGA 1 cut(s) 883
BspLI GGNNCC 5 cut(s) 469, 507, 762, 987, 1872
BspPI GGATC 3 cut(s) 758, 1270, 1660
BspQI GCTCTTC 1 cut(s) 2295
BspT104I TTCGAA 1 cut(s) 867
BspT107I GGYRCC 1 cut(s) 985
BspTNI GGTCTC 2 cut(s) 153, 2337
BsrDI GCAATG 2 cut(s) 1852, 1986
BsrFI RCCGGY 2 cut(s) 411, 2241
BsrGI TGTACA 3 cut(s) 479, 522, 2390
BsrI ACTGG 2 cut(s) 167, 893
BssAI RCCGGY 2 cut(s) 411, 2241
BssECI CCNNGG 6 cut(s) 463, 498, 557, 860, 1564, 2300
BssMI GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
BssNI GRCGYC 2 cut(s) 87, 535
BssT1I CCWWGG 4 cut(s) 498, 557, 1564, 2300
Bst2UI CCWGG 1 cut(s) 465
Bst4CI ACNGT 6 cut(s) 605, 720, 798, 818, 1520, 1992
Bst6I CTCTTC 3 cut(s) 1569, 1653, 2295
BstACI GRCGYC 2 cut(s) 87, 535
BstAPI GCANNNNNTGC 1 cut(s) 69
BstAUI TGTACA 3 cut(s) 479, 522, 2390
BstBAI YACGTR 1 cut(s) 1007
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 7 cut(s) 74, 847, 1248, 1328, 1731, 1843, 2407
BstDEI CTNAG 4 cut(s) 373, 1229, 1426, 1725
BstF5I GGATG 7 cut(s) 108, 367, 567, 824, 1110, 1317, 2348
BstFNI CGCG 1 cut(s) 2210
BstHHI GCGC 2 cut(s) 234, 2212
BstKTI GATC 7 cut(s) 367, 736, 753, 1265, 1668, 1834, 1918
BstMAI GTCTC 5 cut(s) 108, 136, 153, 1971, 2337
BstMBI GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
BstMCI CGRYCG 1 cut(s) 722
BstMWI GCNNNNNNNGC 3 cut(s) 69, 1208, 1247
BstNI CCWGG 1 cut(s) 465
BstNSI RCATGY 4 cut(s) 855, 945, 2111, 2391
BstSCI CCNGG 5 cut(s) 463, 470, 859, 860, 1364
BstSFI CTRYAG 2 cut(s) 999, 2160
BstUI CGCG 1 cut(s) 2210
BstV1I GCAGC 1 cut(s) 75
BstV2I GAAGAC 1 cut(s) 642
BstX2I RGATCY 3 cut(s) 1262, 1665, 1831
BstXI CCANNNNNNTGG 2 cut(s) 301, 1942
BstYI RGATCY 3 cut(s) 1262, 1665, 1831
BsuI GTATCC 2 cut(s) 298, 2094
BsuRI GGCC 5 cut(s) 213, 405, 1563, 1841, 2245
BtsCI GGATG 7 cut(s) 108, 367, 567, 824, 1110, 1317, 2348
BtsI GCAGTG 1 cut(s) 1068
BtsIMutI CAGTG 3 cut(s) 610, 803, 1068
Cac8I GCNNGC 7 cut(s) 74, 847, 1248, 1328, 1731, 1843, 2407
CciI TCATGA 1 cut(s) 883
CfoI GCGC 2 cut(s) 234, 2212
Cfr10I RCCGGY 2 cut(s) 411, 2241
Cfr13I GGNCC 6 cut(s) 252, 403, 417, 554, 803, 1870
Cfr9I CCCGGG 1 cut(s) 860
CpoI CGGWCCG 1 cut(s) 417
CseI GACGC 3 cut(s) 95, 543, 924
Csp6I GTAC 5 cut(s) 240, 480, 523, 986, 2391
CspCI CAANNNNNGTGG 2 cut(s) 672, 707
CspI CGGWCCG 1 cut(s) 417
CviQI GTAC 5 cut(s) 240, 480, 523, 986, 2391
DdeI CTNAG 4 cut(s) 373, 1229, 1426, 1725
DpnI GATC 7 cut(s) 366, 735, 752, 1264, 1667, 1833, 1917
DpnII GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
DraI TTTAAA 1 cut(s) 1740
DrdI GACNNNNNNGTC 3 cut(s) 128, 167, 801
DseDI GACNNNNNNGTC 3 cut(s) 128, 167, 801
EaeI YGGCCR 2 cut(s) 1561, 2243
Eam1104I CTCTTC 3 cut(s) 1569, 1653, 2295
EarI CTCTTC 3 cut(s) 1569, 1653, 2295
Eco130I CCWWGG 4 cut(s) 498, 557, 1564, 2300
Eco147I AGGCCT 1 cut(s) 213
Eco31I GGTCTC 2 cut(s) 153, 2337
Eco32I GATATC 2 cut(s) 645, 787
Eco47I GGWCC 5 cut(s) 252, 417, 554, 803, 1870
Eco72I CACGTG 1 cut(s) 1007
Eco88I CYCGRG 1 cut(s) 860
EcoRII CCWGG 1 cut(s) 463
EcoRV GATATC 2 cut(s) 645, 787
EcoT14I CCWWGG 4 cut(s) 498, 557, 1564, 2300
ErhI CCWWGG 4 cut(s) 498, 557, 1564, 2300
Esp3I CGTCTC 1 cut(s) 108
FaqI GGGAC 2 cut(s) 134, 581
FauI CCCGC 2 cut(s) 540, 922
FauNDI CATATG 1 cut(s) 1954
FbaI TGATCA 2 cut(s) 364, 733
FblI GTMKAC 3 cut(s) 583, 998, 1333
Fnu4HI GCNGC 1 cut(s) 64
FokI GGATG 7 cut(s) 95, 354, 574, 811, 1117, 1324, 2335
Fsp4HI GCNGC 1 cut(s) 64
FspBI CTAG 9 cut(s) 60, 135, 155, 1043, 1259, 1779, 1899, 2273, 2337
GlaI GCGC 2 cut(s) 233, 2211
GluI GCNGC 1 cut(s) 64
GsaI CCCAGC 1 cut(s) 404
GsuI CTGGAG 1 cut(s) 204
HaeIII GGCC 5 cut(s) 213, 405, 1563, 1841, 2245
HapII CCGG 6 cut(s) 412, 471, 861, 1365, 1970, 2242
HgaI GACGC 3 cut(s) 95, 543, 924
HhaI GCGC 2 cut(s) 234, 2212
Hin1I GRCGYC 2 cut(s) 87, 535
Hin6I GCGC 2 cut(s) 232, 2210
HinP1I GCGC 2 cut(s) 232, 2210
HincII GTYRAC 2 cut(s) 628, 1371
HindII GTYRAC 2 cut(s) 628, 1371
HindIII AAGCTT 3 cut(s) 296, 1032, 1492
HpaII CCGG 6 cut(s) 412, 471, 861, 1365, 1970, 2242
HphI GGTGA 4 cut(s) 215, 2177, 2195, 2289
Hpy166II GTNNAC 7 cut(s) 533, 584, 628, 681, 999, 1334, 1371
Hpy188I TCNGA 7 cut(s) 113, 376, 421, 948, 1429, 1599, 2008
Hpy8I GTNNAC 7 cut(s) 533, 584, 628, 681, 999, 1334, 1371
HpyCH4III ACNGT 6 cut(s) 605, 720, 798, 818, 1520, 1992
HpyCH4IV ACGT 5 cut(s) 123, 261, 1006, 1158, 1753
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 1208, 1247
HpyF3I CTNAG 4 cut(s) 373, 1229, 1426, 1725
HpySE526I ACGT 5 cut(s) 123, 261, 1006, 1158, 1753
Hsp92I GRCGYC 2 cut(s) 87, 535
HspAI GCGC 2 cut(s) 232, 2210
Kpn2I TCCGGA 1 cut(s) 1969
KpnI GGTACC 1 cut(s) 989
Ksp22I TGATCA 2 cut(s) 364, 733
Kzo9I GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
LguI GCTCTTC 1 cut(s) 2295
LmnI GCTCC 4 cut(s) 474, 932, 1614, 2363
Lsp1109I GCAGC 1 cut(s) 75
LweI GCATC 1 cut(s) 1177
MaeI CTAG 9 cut(s) 60, 135, 155, 1043, 1259, 1779, 1899, 2273, 2337
MaeII ACGT 5 cut(s) 123, 261, 1006, 1158, 1753
MaeIII GTNAC 4 cut(s) 262, 812, 818, 2383
MalI GATC 7 cut(s) 366, 735, 752, 1264, 1667, 1833, 1917
MboI GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
MfeI CAATTG 1 cut(s) 2394
MflI RGATCY 3 cut(s) 1262, 1665, 1831
MhlI GDGCHC 1 cut(s) 1735
MlsI TGGCCA 1 cut(s) 1563
MluNI TGGCCA 1 cut(s) 1563
MlyI GAGTC 5 cut(s) 422, 665, 986, 1697, 2341
MmeI TCCRAC 5 cut(s) 926, 1179, 1636, 1927, 2083
Mox20I TGGCCA 1 cut(s) 1563
MroI TCCGGA 1 cut(s) 1969
MroXI GAANNNNTTC 1 cut(s) 1593
MscI TGGCCA 1 cut(s) 1563
MseI TTAA 4 cut(s) 1581, 1716, 1739, 1814
Msp20I TGGCCA 1 cut(s) 1563
MspI CCGG 6 cut(s) 412, 471, 861, 1365, 1970, 2242
MspR9I CCNGG 5 cut(s) 465, 472, 861, 862, 1366
MunI CAATTG 1 cut(s) 2394
Mva1269I GAATGC 4 cut(s) 234, 1436, 2065, 2199
MvaI CCWGG 1 cut(s) 465
MvnI CGCG 1 cut(s) 2210
MwoI GCNNNNNNNGC 3 cut(s) 69, 1208, 1247
NciI CCSGG 4 cut(s) 472, 861, 862, 1366
NdeI CATATG 1 cut(s) 1954
NdeII GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
NlaIV GGNNCC 5 cut(s) 469, 507, 762, 987, 1872
NmuCI GTSAC 2 cut(s) 818, 2383
NspI RCATGY 4 cut(s) 855, 945, 2111, 2391
NspV TTCGAA 1 cut(s) 867
PagI TCATGA 1 cut(s) 883
PceI AGGCCT 1 cut(s) 213
PciI ACATGT 2 cut(s) 2107, 2387
PciSI GCTCTTC 1 cut(s) 2295
PctI GAATGC 4 cut(s) 234, 1436, 2065, 2199
PdmI GAANNNNTTC 1 cut(s) 1593
PfeI GAWTC 7 cut(s) 176, 609, 701, 1385, 1805, 2153, 2168
PkrI GCNGC 1 cut(s) 65
PleI GAGTC 5 cut(s) 422, 665, 986, 1697, 2340
PmaCI CACGTG 1 cut(s) 1007
PmlI CACGTG 1 cut(s) 1007
PpsI GAGTC 5 cut(s) 422, 665, 986, 1697, 2340
Ppu21I YACGTR 1 cut(s) 1007
PscI ACATGT 2 cut(s) 2107, 2387
PsiI TTATAA 1 cut(s) 2192
Psp1406I AACGTT 3 cut(s) 261, 1158, 1753
Psp6I CCWGG 1 cut(s) 463
PspCI CACGTG 1 cut(s) 1007
PspFI CCCAGC 1 cut(s) 400
PspGI CCWGG 1 cut(s) 463
PspN4I GGNNCC 5 cut(s) 469, 507, 762, 987, 1872
PspPI GGNCC 6 cut(s) 252, 403, 417, 554, 803, 1870
PsuI RGATCY 3 cut(s) 1262, 1665, 1831
RsaI GTAC 5 cut(s) 241, 481, 524, 987, 2392
RsaNI GTAC 5 cut(s) 240, 480, 523, 986, 2391
Rsr2I CGGWCCG 1 cut(s) 417
RsrII CGGWCCG 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 2295
SaqAI TTAA 4 cut(s) 1581, 1716, 1739, 1814
SatI GCNGC 1 cut(s) 64
Sau3AI GATC 7 cut(s) 364, 733, 750, 1262, 1665, 1831, 1915
Sau96I GGNCC 6 cut(s) 252, 403, 417, 554, 803, 1870
SchI GAGTC 5 cut(s) 422, 665, 986, 1697, 2341
ScrFI CCNGG 5 cut(s) 465, 472, 861, 862, 1366
SduI GDGCHC 1 cut(s) 1735
SfaNI GCATC 1 cut(s) 1177
SfcI CTRYAG 2 cut(s) 999, 2160
SfuI TTCGAA 1 cut(s) 867
SinI GGWCC 5 cut(s) 252, 417, 554, 803, 1870
SmaI CCCGGG 1 cut(s) 862
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
SseBI AGGCCT 1 cut(s) 213
SspI AATATT 3 cut(s) 711, 1346, 1905
SspMI CTAG 9 cut(s) 60, 135, 155, 1043, 1259, 1779, 1899, 2273, 2337
StuI AGGCCT 1 cut(s) 213
StyD4I CCNGG 5 cut(s) 463, 470, 859, 860, 1364
StyI CCWWGG 4 cut(s) 498, 557, 1564, 2300
TaaI ACNGT 6 cut(s) 605, 720, 798, 818, 1520, 1992
TaiI ACGT 5 cut(s) 126, 264, 1009, 1161, 1756
TaqI TCGA 6 cut(s) 194, 867, 896, 963, 1180, 1758
TatI WGTACW 3 cut(s) 479, 522, 2390
TfiI GAWTC 7 cut(s) 176, 609, 701, 1385, 1805, 2153, 2168
Tru1I TTAA 4 cut(s) 1581, 1716, 1739, 1814
Tru9I TTAA 4 cut(s) 1581, 1716, 1739, 1814
TscAI CASTG 3 cut(s) 610, 803, 1075
TseFI GTSAC 2 cut(s) 818, 2383
TseI GCWGC 1 cut(s) 63
Tsp45I GTSAC 2 cut(s) 818, 2383
TspGWI ACGGA 2 cut(s) 240, 807
TspMI CCCGGG 1 cut(s) 860
TspRI CASTG 3 cut(s) 610, 803, 1075
VpaK11BI GGWCC 5 cut(s) 252, 417, 554, 803, 1870
XapI RAATTY 5 cut(s) 616, 1018, 1553, 2095, 2228
XbaI TCTAGA 1 cut(s) 134
XceI RCATGY 4 cut(s) 855, 945, 2111, 2391
XcmI CCANNNNNNNNNTGG 1 cut(s) 397
XmaI CCCGGG 1 cut(s) 860
XmiI GTMKAC 3 cut(s) 583, 998, 1333
XmnI GAANNNNTTC 1 cut(s) 1593
XspI CTAG 9 cut(s) 60, 135, 155, 1043, 1259, 1779, 1899, 2273, 2337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.