RchiOBHm_Chr5g0005031

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
3297586 .. 3301230
3645 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28626

Sequence Viewer

Length: 2403 bp
ATGCCTTTTGCAGAAGGCCCGCGGAATCTGTTGCTTCGGCTTCTTCTTCCTCTTCTGTCTCTACAGTCTTGCAATTCTTTGGGCACGACCATCACTTTTAACCAATCCATTAAAGATGGTGACTTTCTCATCTCTAAAAACAAGGCATTTGTGCTCGGGTTCTTTAGAATCCTCACTATTAGTACTGAAGGAAATCTCATATTACTTCATAACAACAGTCAAGGCCTTCTTCTGTGGTCAACGAATGTTTCTGTCACACCAGTAAGTAACAATAGTACTATGGTGCAGCTCCTGGATTCAGGAAATCTCGTCTTGGTTAATCAGCCGATCAACAACCAGAGTGGTGTCTTATGGCAGAGCTTTGATCATCCTACACATATTATTCTAGCAAACATGAAAATTGGGTTGGAACAGGGTAAGAACATAGTTATTACATCCTGGAACTCGCAAAATGACCCAGGAACTGGTAGTTGCTCAATCAAGACAGAACCAAACGGGTCACCTCAGATAATCTTGTACAAGAATCTGGCCAAGTGGTGGCGGTCAGGTCACTGGGATGGGCTTCACTGGAATGGATTCCCTAATATAAACAGGCAAAGCAAGAATAATTCGTTTGATATTGTATTAGTGAACAACAAAGATGAGGTTACTACAAAATTCGCTGTTCTTGACCCTGCAGTTATCCCAATAATAGAAATTGACGGATCTGGATCACTCCAACTGCTAGCATGGAAGGGACAGCAACAAGGGTGGGTCAAACTCTGGTCACCAACGGATGTCTGTGACAAGTATGGAACGTGTGGTCCATTTGGTGTTTGTAAAGCGTACACTGCTAACTGGGTGAAATGTGGATGCTTGCCAGGATATGAACCCAACTCCCCAGAGGAATGGAGATTAAGAGAAGGATCAGGTGGATGCAAGAGGCAGCAGGGGGCTCCATCCATGTGTAGGAATAGAGAGGGGTTTGTAAAGATACCAAACGTGAAGGTTCCAGATACTTCCACAATCAAATTGGACATCAATTCGAGTATGGAAGCATGTGAGCAGAAGTGTTTGAATAACTGCTCGTGCTTGGCTTATGCCAGTGCAGATGTGAGAAATGGAGGCAGCGGATGCATGACATGGTATGAAGATTTAATGGATACTACTCAGTTTGCTCAAGGACAAGGACAAGATCTCTACATACGCGCGGATGCAATAGTGTCAGTTTTGGTGTTTTGGTTTTCCCACTCATTAGCTAAGTACACGAAGAAGTCAAAGAGGTTCCTTGCCAAAAAGGGGATGTGGTTGATTTTGGTATTCCCACCCATTGCTATGATATTCTTGATCTTTTTTGGATGTTGGTGTTTAAGGAGGAAGACAAAAGGCTCTCTAAGGGAAACGAAGCAATATGGAAGTACAACTCACAAAGACCTAGAATATTTTGACCTAAAAAGCATACTTGTTGCCACTGACAATTTCTCCACTGCTAACAAGCTAGGCGAAGGAGGATTTGGCTCTGTGTATAAGGGCCTACTAGCTAATGGAGAGGAGATTGCTGTGAAAAGATTATCAAAGAACTCCGGACAAGGTTTAGAACAGTTTAAAGCTGAGGTTAAGCTGATAGCAAAACTTCAGCACAGGAACCTGGTCAGGATTCTTGGTTGTTGCATCAATGCAGAAGAGAAGATGTTGATTTATGAATACTTGCCAAACAAGAGCTTGGACTTTTTCATATTTGGTAGAAGTAGAAGCTTGTCGATAGACTGGAAAGACCGTTTTGACATTATAAATGGAATTGCTCGAGGGGTCTTATATCTCCATCAAGACTCAAGATTAAAAATTATCCACAGGGACATAAAAGCTAGCAATGTCTTATTGGATTCCACAATGAACCCAAAGATCTCAGATTTTGGACTCGCTAAAATGATAGGGGAAGACCAAATACAAGCAAATACAAACAGAGTGATTGGAACGTATGGCTACATGTCACCTGAATATGCAATGGAAGGGCGATATTCAACAAAATCTGATGTTTTTAGCTTTGGTGTCTTACTGCTAGAGATCATCAGTGGCAAAAGGAACACTAACTACAATCTTGAGAGCCCCTCCCCCAATTTGATTGGACAAATTTGGGATATGTGGAGAGAGGGTCAAGCATTGGGAATAGTTGATCCTTCTTTGAGTTCATATCCTGCTCATGAGGTTTCAAGATGCATCCACATCGGGCTACTATGCGTGCAAGAATCTACAACAGATCGGCCAACAATGTCGGAAGTAGTTTACATGTTGGGCAAAGAAACACCTCTTACGTCTCCTAAGAAACCTGCATTCATATTACAATCCAGCAATCCAAACTCAGAAGCACCAAGAAGAGGACATTCTCTAAATAATGTAACAATAACAATGCTTGAAGCCCGCTAA

Protein Analysis

800

Amino Acids

89.28

Weight (kDa)

8.85

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 57 - 147 2.8e-20 D-mannose binding lectin
S_locus_glycop PF00954 180 - 292 1.6e-21 S-locus glycoprotein domain
PAN_2 PF08276 316 - 382 5.4e-21 PAN-like domain
Pkinase PF00069 488 - 753 4.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 489 - 755 2.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1769
Acc36I ACCTGC 1 cut(s) 2314
AccB7I CCANNNNNTGG 2 cut(s) 464, 537
AccII CGCG 3 cut(s) 22, 1188, 1190
AccIII TCCGGA 1 cut(s) 1562
AciI CCGC 6 cut(s) 20, 22, 541, 1110, 1190, 2398
AclWI GGATC 4 cut(s) 712, 718, 913, 2147
AcoI YGGCCR 2 cut(s) 528, 2240
AcsI RAATTY 2 cut(s) 656, 2109
AcuI CTGAAG 2 cut(s) 207, 1598
AfaI GTAC 6 cut(s) 184, 277, 518, 827, 1244, 1399
AfiI CCNNNNNNNGG 5 cut(s) 464, 537, 948, 1278, 2354
AflIII ACRYGT 3 cut(s) 797, 1965, 2265
AgsI TTSAA 4 cut(s) 1057, 2001, 2190, 2393
AjnI CCWGG 5 cut(s) 291, 437, 457, 859, 1626
AjuI GAANNNNNNNTTGG 4 cut(s) 389, 421, 1476, 1508
AloI GAACNNNNNNTCC 2 cut(s) 787, 819
Alw21I GWGCWC 1 cut(s) 156
Alw26I GTCTC 2 cut(s) 63, 2298
AlwI GGATC 4 cut(s) 712, 718, 913, 2147
AlwNI CAGNNNCTG 2 cut(s) 292, 464
Ama87I CYCGRG 2 cut(s) 155, 1782
Aor13HI TCCGGA 1 cut(s) 1562
AoxI GGCC 5 cut(s) 16, 223, 528, 1510, 2240
ApeKI GCWGC 3 cut(s) 286, 925, 1107
ApoI RAATTY 2 cut(s) 656, 2109
Asp700I GAANNNNTTC 1 cut(s) 575
AspLEI GCGC 1 cut(s) 1190
AspS9I GGNCC 3 cut(s) 17, 803, 1510
AsuHPI GGTGA 5 cut(s) 131, 492, 759, 853, 1962
AsuNHI GCTAGC 2 cut(s) 724, 1844
AvaI CYCGRG 2 cut(s) 155, 1782
AvaII GGWCC 1 cut(s) 803
BaeGI GKGCMC 1 cut(s) 86
BalI TGGCCA 1 cut(s) 530
BanII GRGCYC 2 cut(s) 937, 2087
BarI GAAGNNNNNNTAC 2 cut(s) 1908, 1940
BauI CACGAG 1 cut(s) 1066
BbsI GAAGAC 2 cut(s) 1364, 1923
Bbv12I GWGCWC 1 cut(s) 156
BbvCI CCTCAGC 1 cut(s) 1590
BbvI GCAGC 3 cut(s) 298, 937, 1119
BccI CCATC 5 cut(s) 98, 110, 551, 946, 1809
BcgI CGANNNNNNTGC 2 cut(s) 2185, 2219
BciT130I CCWGG 5 cut(s) 293, 439, 459, 861, 1628
BciVI GTATCC 1 cut(s) 1135
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 2 cut(s) 63, 2298
BfaI CTAG 7 cut(s) 386, 725, 1415, 1478, 1517, 1845, 2039
BfmI CTRYAG 2 cut(s) 62, 675
BfuAI ACCTGC 1 cut(s) 2314
BfuI GTATCC 1 cut(s) 1135
BglII AGATCT 2 cut(s) 1174, 1881
BisI GCNGC 3 cut(s) 287, 926, 1108
BlsI GCNGC 3 cut(s) 288, 927, 1109
BmcAI AGTACT 2 cut(s) 184, 277
Bme1390I CCNGG 5 cut(s) 293, 439, 459, 861, 1628
Bme18I GGWCC 1 cut(s) 803
BmeT110I CYCGRG 2 cut(s) 155, 1782
BmgT120I GGNCC 3 cut(s) 17, 803, 1510
BmiI GGNNCC 4 cut(s) 936, 990, 1265, 1625
BmrFI CCNGG 5 cut(s) 293, 439, 459, 861, 1628
BmrI ACTGGG 2 cut(s) 562, 847
BmsI GCATC 7 cut(s) 842, 905, 1103, 1183, 1659, 2183, 2205
BmtI GCTAGC 2 cut(s) 728, 1848
BmuI ACTGGG 2 cut(s) 562, 847
BpiI GAAGAC 2 cut(s) 1364, 1923
BplI GAGNNNNNCTC 2 cut(s) 2072, 2104
Bpu10I CCTNAGC 1 cut(s) 1590
BpuEI CTTGAG 3 cut(s) 1143, 1795, 2099
BsaBI GATNNNNATC 1 cut(s) 709
BsaJI CCNNGG 2 cut(s) 20, 457
BsaWI WCCGGW 1 cut(s) 1562
BsaXI ACNNNNNCTCC 4 cut(s) 1445, 1475, 2116, 2146
Bsc4I CCNNNNNNNGG 5 cut(s) 464, 537, 948, 1278, 2354
Bse1I ACTGG 7 cut(s) 260, 469, 557, 572, 842, 1083, 1751
Bse3DI GCAATG 3 cut(s) 1308, 1855, 1989
Bse8I GATNNNNATC 1 cut(s) 709
BseAI TCCGGA 1 cut(s) 1562
BseBI CCWGG 5 cut(s) 293, 439, 459, 861, 1628
BseDI CCNNGG 2 cut(s) 20, 457
BseJI GATNNNNATC 1 cut(s) 709
BseLI CCNNNNNNNGG 5 cut(s) 464, 537, 948, 1278, 2354
BseMI GCAATG 3 cut(s) 1308, 1855, 1989
BseMII CTCAG 5 cut(s) 518, 1163, 1581, 1899, 2352
BseNI ACTGG 7 cut(s) 260, 469, 557, 572, 842, 1083, 1751
BseRI GAGGAG 1 cut(s) 1544
BseSI GKGCMC 1 cut(s) 86
BseXI GCAGC 3 cut(s) 298, 937, 1119
BsgI GTGCAG 2 cut(s) 305, 1107
Bsh1236I CGCG 3 cut(s) 22, 1188, 1190
BshFI GGCC 5 cut(s) 18, 225, 530, 1512, 2242
BsiHKAI GWGCWC 1 cut(s) 156
BsiHKCI CYCGRG 2 cut(s) 155, 1782
BsiSI CCGG 1 cut(s) 1563
BslFI GGGAC 2 cut(s) 750, 1847
BslI CCNNNNNNNGG 5 cut(s) 464, 537, 948, 1278, 2354
BsmAI GTCTC 2 cut(s) 63, 2298
BsmBI CGTCTC 1 cut(s) 2298
BsmFI GGGAC 2 cut(s) 750, 1847
BsmI GAATGC 1 cut(s) 2309
BsnI GGCC 5 cut(s) 18, 225, 530, 1512, 2242
BsoBI CYCGRG 2 cut(s) 155, 1782
Bsp1286I GDGCHC 4 cut(s) 86, 156, 937, 2087
Bsp13I TCCGGA 1 cut(s) 1562
Bsp1407I TGTACA 1 cut(s) 516
BspACI CCGC 6 cut(s) 20, 22, 541, 1110, 1190, 2398
BspANI GGCC 5 cut(s) 18, 225, 530, 1512, 2242
BspCNI CTCAG 5 cut(s) 517, 1162, 1582, 1898, 2351
BspEI TCCGGA 1 cut(s) 1562
BspFNI CGCG 3 cut(s) 22, 1188, 1190
BspHI TCATGA 1 cut(s) 2179
BspLI GGNNCC 4 cut(s) 936, 990, 1265, 1625
BspMAI CTGCAG 1 cut(s) 679
BspMI ACCTGC 1 cut(s) 2314
BspOI GCTAGC 2 cut(s) 728, 1848
BspPI GGATC 4 cut(s) 712, 718, 913, 2147
BsrDI GCAATG 3 cut(s) 1308, 1855, 1989
BsrGI TGTACA 1 cut(s) 516
BsrI ACTGG 7 cut(s) 260, 469, 557, 572, 842, 1083, 1751
BssECI CCNNGG 2 cut(s) 20, 457
BssSI CACGAG 1 cut(s) 1066
Bst2BI CACGAG 1 cut(s) 1066
Bst2UI CCWGG 5 cut(s) 293, 439, 459, 861, 1628
Bst4CI ACNGT 4 cut(s) 66, 218, 1581, 1757
Bst6I CTCTTC 3 cut(s) 57, 1656, 2347
BstAPI GCANNNNNTGC 1 cut(s) 1113
BstAUI TGTACA 1 cut(s) 516
BstC8I GCNNGC 6 cut(s) 20, 726, 857, 1846, 2219, 2398
BstDEI CTNAG 8 cut(s) 504, 1149, 1239, 1373, 1590, 1885, 2298, 2338
BstDSI CCRYGG 1 cut(s) 20
BstEII GGTNACC 2 cut(s) 498, 765
BstFNI CGCG 3 cut(s) 22, 1188, 1190
BstHHI GCGC 1 cut(s) 1190
BstMAI GTCTC 2 cut(s) 63, 2298
BstMWI GCNNNNNNNGC 2 cut(s) 830, 1113
BstNI CCWGG 5 cut(s) 293, 439, 459, 861, 1628
BstNSI RCATGY 3 cut(s) 1041, 1969, 2269
BstPI GGTNACC 2 cut(s) 498, 765
BstSCI CCNGG 5 cut(s) 291, 437, 457, 859, 1626
BstSFI CTRYAG 2 cut(s) 62, 675
BstSLI GKGCMC 1 cut(s) 86
BstUI CGCG 3 cut(s) 22, 1188, 1190
BstV1I GCAGC 3 cut(s) 298, 937, 1119
BstV2I GAAGAC 2 cut(s) 1364, 1923
BstX2I RGATCY 3 cut(s) 704, 1174, 1881
BstXI CCANNNNNNTGG 1 cut(s) 888
BstYI RGATCY 3 cut(s) 704, 1174, 1881
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 5 cut(s) 18, 225, 530, 1512, 2242
BtgI CCRYGG 1 cut(s) 20
BtsI GCAGTG 2 cut(s) 828, 1464
BtsIMutI CAGTG 7 cut(s) 550, 565, 828, 1090, 1449, 1464, 2056
BveI ACCTGC 1 cut(s) 2314
Cac8I GCNNGC 6 cut(s) 20, 726, 857, 1846, 2219, 2398
CaiI CAGNNNCTG 2 cut(s) 292, 464
CciI TCATGA 1 cut(s) 2179
CfoI GCGC 1 cut(s) 1190
Cfr13I GGNCC 3 cut(s) 17, 803, 1510
Cfr42I CCGCGG 1 cut(s) 23
CsiI ACCWGGT 1 cut(s) 1626
Csp6I GTAC 6 cut(s) 183, 276, 517, 826, 1243, 1398
CspCI CAANNNNNGTGG 4 cut(s) 322, 357, 731, 766
CviAII CATG 9 cut(s) 394, 729, 943, 1038, 1117, 1122, 1966, 2180, 2266
CviQI GTAC 6 cut(s) 183, 276, 517, 826, 1243, 1398
DdeI CTNAG 8 cut(s) 504, 1149, 1239, 1373, 1590, 1885, 2298, 2338
DraI TTTAAA 1 cut(s) 1585
EaeI YGGCCR 2 cut(s) 528, 2240
Eam1104I CTCTTC 3 cut(s) 57, 1656, 2347
EarI CTCTTC 3 cut(s) 57, 1656, 2347
Eco147I AGGCCT 1 cut(s) 225
Eco24I GRGCYC 2 cut(s) 937, 2087
Eco47I GGWCC 1 cut(s) 803
Eco57I CTGAAG 2 cut(s) 207, 1598
Eco88I CYCGRG 2 cut(s) 155, 1782
Eco91I GGTNACC 2 cut(s) 498, 765
EcoO109I RGGNCCY 1 cut(s) 1510
EcoO65I GGTNACC 2 cut(s) 498, 765
EcoRII CCWGG 5 cut(s) 291, 437, 457, 859, 1626
EcoT22I ATGCAT 2 cut(s) 1118, 2198
EcoT38I GRGCYC 2 cut(s) 937, 2087
Esp3I CGTCTC 1 cut(s) 2298
FaeI CATG 9 cut(s) 397, 732, 946, 1041, 1120, 1125, 1969, 2183, 2269
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 2 cut(s) 750, 1847
FatI CATG 9 cut(s) 393, 728, 942, 1037, 1116, 1121, 1965, 2179, 2265
FauI CCCGC 1 cut(s) 27
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 3 cut(s) 287, 926, 1108
FriOI GRGCYC 2 cut(s) 937, 2087
Fsp4HI GCNGC 3 cut(s) 287, 926, 1108
FspBI CTAG 7 cut(s) 386, 725, 1415, 1478, 1517, 1845, 2039
GlaI GCGC 1 cut(s) 1189
GluI GCNGC 3 cut(s) 287, 926, 1108
HaeIII GGCC 5 cut(s) 18, 225, 530, 1512, 2242
HapII CCGG 1 cut(s) 1563
HhaI GCGC 1 cut(s) 1190
Hin1II CATG 9 cut(s) 397, 732, 946, 1041, 1120, 1125, 1969, 2183, 2269
Hin6I GCGC 1 cut(s) 1188
HinP1I GCGC 1 cut(s) 1188
HincII GTYRAC 1 cut(s) 240
HindII GTYRAC 1 cut(s) 240
HindIII AAGCTT 1 cut(s) 1732
HpaII CCGG 1 cut(s) 1563
HphI GGTGA 5 cut(s) 131, 492, 759, 853, 1962
Hpy166II GTNNAC 5 cut(s) 240, 631, 828, 1245, 2263
Hpy188I TCNGA 5 cut(s) 507, 1888, 2011, 2254, 2341
Hpy8I GTNNAC 5 cut(s) 240, 631, 828, 1245, 2263
HpyAV CCTTC 9 cut(s) 8, 182, 236, 727, 896, 979, 1478, 1982, 2166
HpyCH4III ACNGT 4 cut(s) 66, 218, 1581, 1757
HpyCH4IV ACGT 4 cut(s) 797, 981, 1955, 2291
HpyF10VI GCNNNNNNNGC 2 cut(s) 830, 1113
HpyF3I CTNAG 8 cut(s) 504, 1149, 1239, 1373, 1590, 1885, 2298, 2338
HpySE526I ACGT 4 cut(s) 797, 981, 1955, 2291
Hsp92II CATG 9 cut(s) 397, 732, 946, 1041, 1120, 1125, 1969, 2183, 2269
HspAI GCGC 1 cut(s) 1188
Kpn2I TCCGGA 1 cut(s) 1562
Ksp22I TGATCA 1 cut(s) 364
KspI CCGCGG 1 cut(s) 23
LmnI GCTCC 2 cut(s) 294, 940
Lsp1109I GCAGC 3 cut(s) 298, 937, 1119
LweI GCATC 7 cut(s) 842, 905, 1103, 1183, 1659, 2183, 2205
MabI ACCWGGT 1 cut(s) 1626
MaeI CTAG 7 cut(s) 386, 725, 1415, 1478, 1517, 1845, 2039
MaeII ACGT 4 cut(s) 797, 981, 1955, 2291
MflI RGATCY 3 cut(s) 704, 1174, 1881
MhlI GDGCHC 4 cut(s) 86, 156, 937, 2087
MlsI TGGCCA 1 cut(s) 530
MluNI TGGCCA 1 cut(s) 530
MlyI GAGTC 2 cut(s) 1802, 1890
MmeI TCCRAC 3 cut(s) 387, 742, 2232
Mox20I TGGCCA 1 cut(s) 530
Mph1103I ATGCAT 2 cut(s) 1118, 2198
MroI TCCGGA 1 cut(s) 1562
MroXI GAANNNNTTC 1 cut(s) 575
MscI TGGCCA 1 cut(s) 530
MseI TTAA 9 cut(s) 99, 111, 318, 896, 1136, 1349, 1584, 1596, 1817
MslI CAYNNNNRTG 4 cut(s) 555, 570, 943, 1313
Msp20I TGGCCA 1 cut(s) 530
MspA1I CMGCKG 2 cut(s) 22, 1110
MspI CCGG 1 cut(s) 1563
MspR9I CCNGG 5 cut(s) 293, 439, 459, 861, 1628
Mva1269I GAATGC 1 cut(s) 2309
MvaI CCWGG 5 cut(s) 293, 439, 459, 861, 1628
MvnI CGCG 3 cut(s) 22, 1188, 1190
MwoI GCNNNNNNNGC 2 cut(s) 830, 1113
NheI GCTAGC 2 cut(s) 724, 1844
NlaIII CATG 9 cut(s) 397, 732, 946, 1041, 1120, 1125, 1969, 2183, 2269
NlaIV GGNNCC 4 cut(s) 936, 990, 1265, 1625
NmuCI GTSAC 7 cut(s) 119, 253, 498, 548, 765, 782, 1968
NsiI ATGCAT 2 cut(s) 1118, 2198
NspI RCATGY 3 cut(s) 1041, 1969, 2269
PaeR7I CTCGAG 1 cut(s) 1782
PagI TCATGA 1 cut(s) 2179
PceI AGGCCT 1 cut(s) 225
PciI ACATGT 2 cut(s) 1965, 2265
PctI GAATGC 1 cut(s) 2309
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 8 cut(s) 25, 168, 296, 523, 576, 1636, 1862, 2225
PflMI CCANNNNNTGG 2 cut(s) 464, 537
PfoI TCCNGGA 2 cut(s) 291, 437
PkrI GCNGC 3 cut(s) 288, 927, 1109
PleI GAGTC 2 cut(s) 1802, 1890
PpsI GAGTC 2 cut(s) 1802, 1890
PscI ACATGT 2 cut(s) 1965, 2265
PsiI TTATAA 1 cut(s) 1769
Psp6I CCWGG 5 cut(s) 291, 437, 457, 859, 1626
PspEI GGTNACC 2 cut(s) 498, 765
PspGI CCWGG 5 cut(s) 291, 437, 457, 859, 1626
PspN4I GGNNCC 4 cut(s) 936, 990, 1265, 1625
PspPI GGNCC 3 cut(s) 17, 803, 1510
PspXI VCTCGAGB 1 cut(s) 1782
PsrI GAACNNNNNNTAC 2 cut(s) 2054, 2086
PstI CTGCAG 1 cut(s) 679
PstNI CAGNNNCTG 2 cut(s) 292, 464
PsuI RGATCY 3 cut(s) 704, 1174, 1881
RsaI GTAC 6 cut(s) 184, 277, 518, 827, 1244, 1399
RsaNI GTAC 6 cut(s) 183, 276, 517, 826, 1243, 1398
RseI CAYNNNNRTG 4 cut(s) 555, 570, 943, 1313
SacII CCGCGG 1 cut(s) 23
SaqAI TTAA 9 cut(s) 99, 111, 318, 896, 1136, 1349, 1584, 1596, 1817
SatI GCNGC 3 cut(s) 287, 926, 1108
Sau96I GGNCC 3 cut(s) 17, 803, 1510
ScaI AGTACT 2 cut(s) 184, 277
SchI GAGTC 2 cut(s) 1802, 1890
ScrFI CCNGG 5 cut(s) 293, 439, 459, 861, 1628
SduI GDGCHC 4 cut(s) 86, 156, 937, 2087
SexAI ACCWGGT 1 cut(s) 1626
SfaNI GCATC 7 cut(s) 842, 905, 1103, 1183, 1659, 2183, 2205
SfcI CTRYAG 2 cut(s) 62, 675
Sfr274I CTCGAG 1 cut(s) 1782
Sfr303I CCGCGG 1 cut(s) 23
SgrBI CCGCGG 1 cut(s) 23
SinI GGWCC 1 cut(s) 803
SlaI CTCGAG 1 cut(s) 1782
SmiMI CAYNNNNRTG 4 cut(s) 555, 570, 943, 1313
SmlI CTYRAG 4 cut(s) 1158, 1782, 1810, 2078
SmoI CTYRAG 4 cut(s) 1158, 1782, 1810, 2078
SseBI AGGCCT 1 cut(s) 225
SsiI CCGC 6 cut(s) 20, 22, 541, 1110, 1190, 2398
SspI AATATT 1 cut(s) 1421
SspMI CTAG 7 cut(s) 386, 725, 1415, 1478, 1517, 1845, 2039
StuI AGGCCT 1 cut(s) 225
StyD4I CCNGG 5 cut(s) 291, 437, 457, 859, 1626
TaaI ACNGT 4 cut(s) 66, 218, 1581, 1757
TaiI ACGT 4 cut(s) 800, 984, 1958, 2294
TaqI TCGA 3 cut(s) 1025, 1739, 1783
TatI WGTACW 5 cut(s) 182, 275, 516, 1242, 1397
TfiI GAWTC 8 cut(s) 25, 168, 296, 523, 576, 1636, 1862, 2225
Tru1I TTAA 9 cut(s) 99, 111, 318, 896, 1136, 1349, 1584, 1596, 1817
Tru9I TTAA 9 cut(s) 99, 111, 318, 896, 1136, 1349, 1584, 1596, 1817
TscAI CASTG 7 cut(s) 557, 572, 835, 1090, 1456, 1471, 2056
TseFI GTSAC 7 cut(s) 119, 253, 498, 548, 765, 782, 1968
TseI GCWGC 3 cut(s) 286, 925, 1107
Tsp45I GTSAC 7 cut(s) 119, 253, 498, 548, 765, 782, 1968
TspDTI ATGAA 9 cut(s) 197, 410, 882, 1143, 1695, 1702, 1886, 2157, 2302
TspGWI ACGGA 2 cut(s) 717, 788
TspRI CASTG 7 cut(s) 557, 572, 835, 1090, 1456, 1471, 2056
Van91I CCANNNNNTGG 2 cut(s) 464, 537
VpaK11BI GGWCC 1 cut(s) 803
XapI RAATTY 2 cut(s) 656, 2109
XceI RCATGY 3 cut(s) 1041, 1969, 2269
XcmI CCANNNNNNNNNTGG 1 cut(s) 1009
XhoI CTCGAG 1 cut(s) 1782
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 7 cut(s) 386, 725, 1415, 1478, 1517, 1845, 2039
ZrmI AGTACT 2 cut(s) 184, 277
Zsp2I ATGCAT 2 cut(s) 1118, 2198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.