Rmu_sc0009702.1_g000004

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009702.1
OG0000099
Physical Location & Seq
Forward (+)
10636 .. 14989
4354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009702.1_g000004.1.cds

Sequence Viewer

Length: 2502 bp
atgggaagaggaactgatgttacgttggaagtggaggtagacatggtggaagacgtacacaaatcaacgccccaaatagatgatcgaacaagtgctgataccactgttagaatttgtggctttgataccattgttggaatttggtgcggaagttttaggagtagtggaaagtttgcactagggtttttcagccccggaaaatccctaaaccgttacgtaggagtatggtattaccgagttccaaaccaaaccatcgtctgggttacaaacagagacaaccctgttccagtcaatgatacctccggtctcctagcaattcatggaaatggatacctggtcatatacggtaaggaccgaaatacccctctttggttagctaatgttactctatcttcgccaaatagttccattgccaagcttttggatacaggtaatcttgttttgcttgagaatggggatagtcaaaaggcgatgtggcaaggctttgattatccttcaaatactatgcttccatctatgaaactagcagcgttcaacaagcggtctaggttggatcggttcttaacatcttggaagtctcaagatgacccaagtaccgggagctgtgtataccgatttgactcaagtggacttccgcagctgattttgtacaaggatggagctatattgtggcgagctggatcttggaccggcaagggattgagtagtattcctgatagggaaaccaaatccatcttcaatgttatttttgtggacaatgaaaatgagatatccattgtgtacgttgttactgatgattcagtcttctcgagaacagtccttgatgaatcgggaacccttgaacggtcggcatggaatggtactgttgagtgcacctgcctaccaggttttgaacccgagtcgcccactgattggtacttgagagatggatcggctggatgtatccgaggaaagggggtatccatgtgtggaaagggagaagggtttgtgaagatgtcacacgtaaagataccggagttatctaaggcacttgtaaacatgaacttgagcttgaaagagtgcaagcaagagtgcttgaaaaattgttcttgcactgcatactcaactgcgaatggaaaatctgagggtggatgcttgacatggtatggggacttgatggacataaggacgtttgcaaatgttggtcaagaattgtatttacgcgttgacgcaaatgtcttgggatctatgatcagtaaattcctcatcttccttctcataccctgttgcatttctcttgacactattacaccaaaccaacctctaaaagatggcgacgttcttgtgtcaaccgaaaaaatctttgcacttggatttttcagccccggaaagtctcacaaccgttatgttggagtttggtactaccaagttcctaaccaaacaattgtgtgggttgcaaacagagataatcctgtcaatggaagctctggtcttctagcaattcatggagacgggggccttgtgatctatgagaaagaccaaaagattcctatttggtcctctaatgctactctctcctctccaaacaattctatggccaagcttttggatacaggaaatcttgtattgctggagaatgaggtaagccaaaatgtactatgggaaggctttgatcatccttcaaatactatgcttccatttatgaaacttggggtgaacaggcagtctcgaatagactggtttttgacatcttggaagtctcaagatgacccaggaaccgggaactgttcatatcggattgactcaagtggatttccacagctgattttgtacaaggatggagctccgtggtggcgggctggaacttggactggcctgagattgagtggcgtgcctgtctcatcacctaatttcatcttcaatagtagttttgtgaacaatcaagacgagatatctgtcatgtatgttgttaataacgcctcctcaatattcactaggaccgtgctagatgaaacaggaaccatggcacggtccacatggaatggtgaagcacacgaatggaacgtgttttggtcagccccagtagagcggtgtgattactatggacgctgtggtccaaatagtaactgtaacccggactatatagataccactgaatgcacatgcctacctgggtttgaacccaagtcgcccaccgattggtacttgagagatgggtccggtgggtgtattcggggaaaaggagtatccatgtgtggaaatggggaaggatttgtgaaaattgtacgagtaaagataccagagtcgtctatggcaagtgtaaacatcaatatgagtttgaaagcgtgtgaacaagagtgcttgagaaattgttcttgcactgcatactcgattgcagatgagaacaagggaggaattggatgcgtgacatggcatggagatcttatggacataaggactttttcaaatgctggccaagatttatatgttcgagttaatgctactgtcttgggtaacaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

833

Amino Acids

91.94

Weight (kDa)

5.34

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 884
AasI GACNNNNNNGTC 2 cut(s) 1214, 2091
Acc36I ACCTGC 1 cut(s) 884
AccB7I CCANNNNNTGG 3 cut(s) 258, 912, 2178
AccBSI CCGCTC 1 cut(s) 2068
AccI GTMKAC 2 cut(s) 39, 609
AccII CGCG 1 cut(s) 1203
AciI CCGC 5 cut(s) 147, 541, 635, 1834, 2068
AclWI GGATC 4 cut(s) 561, 688, 937, 1231
AcoI YGGCCR 2 cut(s) 1575, 2452
AcsI RAATTY 3 cut(s) 111, 138, 1238
AflIII ACRYGT 3 cut(s) 1000, 1201, 2043
AjnI CCWGG 4 cut(s) 333, 883, 1750, 2149
AjuI GAANNNNNNNTTGG 2 cut(s) 719, 751
Alw21I GWGCWC 2 cut(s) 875, 1825
Alw26I GTCTC 8 cut(s) 267, 311, 582, 1377, 1482, 1710, 1743, 1882
Alw44I GTGCAC 1 cut(s) 871
AlwI GGATC 4 cut(s) 561, 688, 937, 1231
Ama87I CYCGRG 2 cut(s) 808, 896
AoxI GGCC 4 cut(s) 1495, 1575, 1852, 2452
ApaLI GTGCAC 1 cut(s) 871
ApeKI GCWGC 2 cut(s) 527, 637
ApoI RAATTY 3 cut(s) 111, 138, 1238
Asp700I GAANNNNTTC 1 cut(s) 2350
AspS9I GGNCC 8 cut(s) 352, 687, 1495, 1536, 1977, 2010, 2093, 2196
AsuC2I CCSGG 5 cut(s) 195, 598, 1365, 1759, 2114
AsuHPI GGTGA 3 cut(s) 1705, 1875, 2036
AvaI CYCGRG 2 cut(s) 808, 896
AvaII GGWCC 7 cut(s) 352, 687, 1536, 1977, 2010, 2093, 2196
BaeGI GKGCMC 1 cut(s) 875
BalI TGGCCA 2 cut(s) 1577, 2454
BanII GRGCYC 1 cut(s) 1825
BbsI GAAGAC 3 cut(s) 57, 796, 1463
Bbv12I GWGCWC 2 cut(s) 875, 1825
BbvI GCAGC 2 cut(s) 539, 649
BccI CCATC 9 cut(s) 260, 520, 650, 740, 920, 1150, 1304, 1811, 2186
BciT130I CCWGG 4 cut(s) 335, 885, 1752, 2151
BciVI GTATCC 6 cut(s) 323, 418, 953, 970, 1582, 2236
BclI TGATCA 2 cut(s) 1230, 1651
BcnI CCSGG 5 cut(s) 195, 598, 1365, 1759, 2114
BcoDI GTCTC 8 cut(s) 267, 311, 582, 1377, 1482, 1710, 1743, 1882
BfaI CTAG 7 cut(s) 179, 311, 524, 546, 1475, 1974, 1985
BfuAI ACCTGC 1 cut(s) 884
BfuI GTATCC 6 cut(s) 323, 418, 953, 970, 1582, 2236
BglII AGATCT 1 cut(s) 2419
BisI GCNGC 2 cut(s) 528, 638
BlsI GCNGC 2 cut(s) 529, 639
Bme1390I CCNGG 9 cut(s) 195, 335, 598, 885, 1365, 1752, 1759, 2114, 2151
Bme18I GGWCC 7 cut(s) 352, 687, 1536, 1977, 2010, 2093, 2196
BmeT110I CYCGRG 2 cut(s) 808, 896
BmgT120I GGNCC 8 cut(s) 352, 687, 1495, 1536, 1977, 2010, 2093, 2196
BmiI GGNNCC 5 cut(s) 835, 1496, 1756, 1999, 2197
BmrFI CCNGG 9 cut(s) 195, 335, 598, 885, 1365, 1752, 1759, 2114, 2151
BmrI ACTGGG 1 cut(s) 2054
BmsI GCATC 2 cut(s) 1121, 2390
BmuI ACTGGG 1 cut(s) 2054
BpiI GAAGAC 3 cut(s) 57, 796, 1463
BpmI CTGGAG 1 cut(s) 1631
BpuEI CTTGAG 9 cut(s) 467, 564, 607, 940, 1066, 1725, 1768, 2206, 2362
BpuMI CCSGG 5 cut(s) 195, 598, 1365, 1759, 2114
BsaAI YACGTR 2 cut(s) 217, 1003
BsaI GGTCTC 1 cut(s) 311
BsaJI CCNNGG 7 cut(s) 193, 946, 1363, 1750, 1826, 2001, 2150
BsaWI WCCGGW 3 cut(s) 302, 1012, 2198
Bse118I RCCGGY 1 cut(s) 689
Bse1I ACTGG 4 cut(s) 287, 1721, 1855, 2060
Bse3DI GCAATG 1 cut(s) 408
BseBI CCWGG 4 cut(s) 335, 885, 1752, 2151
BseDI CCNNGG 7 cut(s) 193, 946, 1363, 1750, 1826, 2001, 2150
BseGI GGATG 6 cut(s) 661, 944, 1136, 1654, 1822, 2405
BseMI GCAATG 1 cut(s) 408
BseMII CTCAG 2 cut(s) 1113, 1847
BseNI ACTGG 4 cut(s) 287, 1721, 1855, 2060
BseRI GAGGAG 2 cut(s) 1546, 1951
BseSI GKGCMC 1 cut(s) 875
BseXI GCAGC 2 cut(s) 539, 649
Bsh1236I CGCG 1 cut(s) 1203
Bsh1285I CGRYCG 1 cut(s) 848
BshFI GGCC 4 cut(s) 1497, 1577, 1854, 2454
BsiEI CGRYCG 1 cut(s) 848
BsiHKAI GWGCWC 2 cut(s) 875, 1825
BsiHKCI CYCGRG 2 cut(s) 808, 896
BsiSI CCGG 9 cut(s) 195, 303, 597, 690, 1013, 1365, 1758, 2114, 2199
BslFI GGGAC 1 cut(s) 1163
BsmAI GTCTC 8 cut(s) 267, 311, 582, 1377, 1482, 1710, 1743, 1882
BsmBI CGTCTC 1 cut(s) 1482
BsmFI GGGAC 1 cut(s) 1163
BsmI GAATGC 1 cut(s) 2141
BsnI GGCC 4 cut(s) 1497, 1577, 1854, 2454
Bso31I GGTCTC 1 cut(s) 311
BsoBI CYCGRG 2 cut(s) 808, 896
Bsp1286I GDGCHC 2 cut(s) 875, 1825
Bsp1407I TGTACA 2 cut(s) 648, 1809
Bsp143I GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
Bsp19I CCATGG 1 cut(s) 2001
BspACI CCGC 5 cut(s) 147, 541, 635, 1834, 2068
BspANI GGCC 4 cut(s) 1497, 1577, 1854, 2454
BspCNI CTCAG 2 cut(s) 1114, 1848
BspFNI CGCG 1 cut(s) 1203
BspLI GGNNCC 5 cut(s) 835, 1496, 1756, 1999, 2197
BspMI ACCTGC 1 cut(s) 884
BspPI GGATC 4 cut(s) 561, 688, 937, 1231
BspTNI GGTCTC 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 2068
BsrDI GCAATG 1 cut(s) 408
BsrFI RCCGGY 1 cut(s) 689
BsrGI TGTACA 2 cut(s) 648, 1809
BsrI ACTGG 4 cut(s) 287, 1721, 1855, 2060
BssAI RCCGGY 1 cut(s) 689
BssECI CCNNGG 7 cut(s) 193, 946, 1363, 1750, 1826, 2001, 2150
BssMI GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
BssNAI GTATAC 1 cut(s) 610
BssT1I CCWWGG 1 cut(s) 2001
Bst1107I GTATAC 1 cut(s) 610
Bst2UI CCWGG 4 cut(s) 335, 885, 1752, 2151
BstAUI TGTACA 2 cut(s) 648, 1809
BstBAI YACGTR 2 cut(s) 217, 1003
BstC8I GCNNGC 5 cut(s) 675, 1064, 1836, 1871, 2452
BstDEI CTNAG 3 cut(s) 1023, 1122, 1856
BstDSI CCRYGG 2 cut(s) 1826, 2001
BstF5I GGATG 6 cut(s) 661, 944, 1136, 1654, 1822, 2405
BstFNI CGCG 1 cut(s) 1203
BstKTI GATC 9 cut(s) 85, 556, 683, 932, 1226, 1233, 1506, 1654, 2422
BstMAI GTCTC 8 cut(s) 267, 311, 582, 1377, 1482, 1710, 1743, 1882
BstMBI GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
BstMCI CGRYCG 1 cut(s) 848
BstNI CCWGG 4 cut(s) 335, 885, 1752, 2151
BstNSI RCATGY 1 cut(s) 2145
BstSCI CCNGG 9 cut(s) 193, 333, 596, 883, 1363, 1750, 1757, 2112, 2149
BstSLI GKGCMC 1 cut(s) 875
BstSNI TACGTA 1 cut(s) 217
BstUI CGCG 1 cut(s) 1203
BstV1I GCAGC 2 cut(s) 539, 649
BstV2I GAAGAC 3 cut(s) 57, 796, 1463
BstX2I RGATCY 3 cut(s) 680, 1223, 2419
BstXI CCANNNNNNTGG 2 cut(s) 421, 1585
BstYI RGATCY 3 cut(s) 680, 1223, 2419
BstZ17I GTATAC 1 cut(s) 610
BsuI GTATCC 6 cut(s) 323, 418, 953, 970, 1582, 2236
BsuRI GGCC 4 cut(s) 1497, 1577, 1854, 2454
BtgI CCRYGG 2 cut(s) 1826, 2001
BtgZI GCGATG 1 cut(s) 485
BtsCI GGATG 6 cut(s) 661, 944, 1136, 1654, 1822, 2405
BtsI GCAGTG 2 cut(s) 1092, 2358
BtsIMutI CAGTG 5 cut(s) 102, 906, 1092, 2130, 2358
BveI ACCTGC 1 cut(s) 884
Cac8I GCNNGC 5 cut(s) 675, 1064, 1836, 1871, 2452
Cfr10I RCCGGY 1 cut(s) 689
Cfr13I GGNCC 8 cut(s) 352, 687, 1495, 1536, 1977, 2010, 2093, 2196
CseI GACGC 2 cut(s) 1217, 2094
CsiI ACCWGGT 2 cut(s) 333, 883
DdeI CTNAG 3 cut(s) 1023, 1122, 1856
DpnI GATC 9 cut(s) 84, 555, 682, 931, 1225, 1232, 1505, 1653, 2421
DpnII GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
DrdI GACNNNNNNGTC 2 cut(s) 1214, 2091
DseDI GACNNNNNNGTC 2 cut(s) 1214, 2091
EaeI YGGCCR 2 cut(s) 1575, 2452
Ecl136II GAGCTC 1 cut(s) 1823
Eco105I TACGTA 1 cut(s) 217
Eco130I CCWWGG 1 cut(s) 2001
Eco24I GRGCYC 1 cut(s) 1825
Eco31I GGTCTC 1 cut(s) 311
Eco32I GATATC 2 cut(s) 771, 1932
Eco47I GGWCC 7 cut(s) 352, 687, 1536, 1977, 2010, 2093, 2196
Eco53kI GAGCTC 1 cut(s) 1823
Eco88I CYCGRG 2 cut(s) 808, 896
EcoICRI GAGCTC 1 cut(s) 1823
EcoO109I RGGNCCY 1 cut(s) 1495
EcoRII CCWGG 4 cut(s) 333, 883, 1750, 2149
EcoRV GATATC 2 cut(s) 771, 1932
EcoT14I CCWWGG 1 cut(s) 2001
EcoT38I GRGCYC 1 cut(s) 1825
ErhI CCWWGG 1 cut(s) 2001
Esp3I CGTCTC 1 cut(s) 1482
FaqI GGGAC 1 cut(s) 1163
FauI CCCGC 1 cut(s) 1827
FbaI TGATCA 2 cut(s) 1230, 1651
FblI GTMKAC 2 cut(s) 39, 609
Fnu4HI GCNGC 2 cut(s) 528, 638
FokI GGATG 6 cut(s) 668, 951, 1143, 1641, 1829, 2412
FriOI GRGCYC 1 cut(s) 1825
Fsp4HI GCNGC 2 cut(s) 528, 638
FspBI CTAG 7 cut(s) 179, 311, 524, 546, 1475, 1974, 1985
GluI GCNGC 2 cut(s) 528, 638
GsuI CTGGAG 1 cut(s) 1631
HaeIII GGCC 4 cut(s) 1497, 1577, 1854, 2454
HapII CCGG 9 cut(s) 195, 303, 597, 690, 1013, 1365, 1758, 2114, 2199
HgaI GACGC 2 cut(s) 1217, 2094
HincII GTYRAC 2 cut(s) 1207, 1329
HindII GTYRAC 2 cut(s) 1207, 1329
HindIII AAGCTT 2 cut(s) 416, 1580
HinfI GANTC 7 cut(s) 620, 797, 827, 899, 1525, 1781, 2282
HpaII CCGG 9 cut(s) 195, 303, 597, 690, 1013, 1365, 1758, 2114, 2199
HphI GGTGA 3 cut(s) 1705, 1875, 2036
Hpy188I TCNGA 3 cut(s) 947, 1123, 1776
Hpy99I CGWCG 1 cut(s) 1319
HpyAV CCTTC 6 cut(s) 504, 974, 1262, 1637, 1668, 2240
HpyCH4IV ACGT 8 cut(s) 23, 54, 216, 783, 1002, 1169, 1317, 2043
HpyF3I CTNAG 3 cut(s) 1023, 1122, 1856
HpySE526I ACGT 8 cut(s) 23, 54, 216, 783, 1002, 1169, 1317, 2043
Ksp22I TGATCA 2 cut(s) 1230, 1651
Kzo9I GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
LmnI GCTCC 4 cut(s) 600, 659, 1820, 1828
Lsp1109I GCAGC 2 cut(s) 539, 649
LweI GCATC 2 cut(s) 1121, 2390
MabI ACCWGGT 2 cut(s) 333, 883
MaeI CTAG 7 cut(s) 179, 311, 524, 546, 1475, 1974, 1985
MaeII ACGT 8 cut(s) 23, 54, 216, 783, 1002, 1169, 1317, 2043
MalI GATC 9 cut(s) 84, 555, 682, 931, 1225, 1232, 1505, 1653, 2421
MbiI CCGCTC 1 cut(s) 2068
MboI GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
MboII GAAGA 9 cut(s) 18, 62, 384, 727, 796, 1003, 1240, 1463, 1888
MfeI CAATTG 1 cut(s) 1422
MflI RGATCY 3 cut(s) 680, 1223, 2419
MhlI GDGCHC 2 cut(s) 875, 1825
MlsI TGGCCA 2 cut(s) 1577, 2454
MluI ACGCGT 1 cut(s) 1201
MluNI TGGCCA 2 cut(s) 1577, 2454
MlyI GAGTC 4 cut(s) 614, 908, 1775, 2291
MmeI TCCRAC 4 cut(s) 6, 115, 531, 1369
Mox20I TGGCCA 2 cut(s) 1577, 2454
MroXI GAANNNNTTC 1 cut(s) 2350
MscI TGGCCA 2 cut(s) 1577, 2454
MseI TTAA 4 cut(s) 563, 1950, 2475, 2500
MslI CAYNNNNRTG 3 cut(s) 324, 2035, 2309
Msp20I TGGCCA 2 cut(s) 1577, 2454
MspA1I CMGCKG 2 cut(s) 640, 1801
MspI CCGG 9 cut(s) 195, 303, 597, 690, 1013, 1365, 1758, 2114, 2199
MspR9I CCNGG 9 cut(s) 195, 335, 598, 885, 1365, 1752, 1759, 2114, 2151
MunI CAATTG 1 cut(s) 1422
Mva1269I GAATGC 1 cut(s) 2141
MvaI CCWGG 4 cut(s) 335, 885, 1752, 2151
MvnI CGCG 1 cut(s) 1203
NciI CCSGG 5 cut(s) 195, 598, 1365, 1759, 2114
NcoI CCATGG 1 cut(s) 2001
NdeII GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
NlaIV GGNNCC 5 cut(s) 835, 1496, 1756, 1999, 2197
NmuCI GTSAC 2 cut(s) 996, 2404
NspI RCATGY 1 cut(s) 2145
PaeR7I CTCGAG 1 cut(s) 808
PaqCI CACCTGC 1 cut(s) 884
PcsI WCGNNNNNNNCGW 1 cut(s) 2040
PctI GAATGC 1 cut(s) 2141
PdmI GAANNNNTTC 1 cut(s) 2350
PfeI GAWTC 3 cut(s) 797, 827, 1525
PflMI CCANNNNNTGG 3 cut(s) 258, 912, 2178
PkrI GCNGC 2 cut(s) 529, 639
PleI GAGTC 4 cut(s) 614, 907, 1775, 2290
PpsI GAGTC 4 cut(s) 614, 907, 1775, 2290
Ppu21I YACGTR 2 cut(s) 217, 1003
Psp124BI GAGCTC 1 cut(s) 1825
Psp6I CCWGG 4 cut(s) 333, 883, 1750, 2149
PspGI CCWGG 4 cut(s) 333, 883, 1750, 2149
PspN4I GGNNCC 5 cut(s) 835, 1496, 1756, 1999, 2197
PspPI GGNCC 8 cut(s) 352, 687, 1495, 1536, 1977, 2010, 2093, 2196
PsrI GAACNNNNNNTAC 1 cut(s) 36
PsuI RGATCY 3 cut(s) 680, 1223, 2419
PvuII CAGCTG 2 cut(s) 640, 1801
RseI CAYNNNNRTG 3 cut(s) 324, 2035, 2309
SacI GAGCTC 1 cut(s) 1825
SaqAI TTAA 4 cut(s) 563, 1950, 2475, 2500
SatI GCNGC 2 cut(s) 528, 638
Sau3AI GATC 9 cut(s) 82, 553, 680, 929, 1223, 1230, 1503, 1651, 2419
Sau96I GGNCC 8 cut(s) 352, 687, 1495, 1536, 1977, 2010, 2093, 2196
SchI GAGTC 4 cut(s) 614, 908, 1775, 2291
ScrFI CCNGG 9 cut(s) 195, 335, 598, 885, 1365, 1752, 1759, 2114, 2151
SduI GDGCHC 2 cut(s) 875, 1825
SexAI ACCWGGT 2 cut(s) 333, 883
SfaNI GCATC 2 cut(s) 1121, 2390
Sfr274I CTCGAG 1 cut(s) 808
SinI GGWCC 7 cut(s) 352, 687, 1536, 1977, 2010, 2093, 2196
SlaI CTCGAG 1 cut(s) 808
SmiMI CAYNNNNRTG 3 cut(s) 324, 2035, 2309
SnaBI TACGTA 1 cut(s) 217
SsiI CCGC 5 cut(s) 147, 541, 635, 1834, 2068
SspI AATATT 1 cut(s) 1968
SspMI CTAG 7 cut(s) 179, 311, 524, 546, 1475, 1974, 1985
SstI GAGCTC 1 cut(s) 1825
StyD4I CCNGG 9 cut(s) 193, 333, 596, 883, 1363, 1750, 1757, 2112, 2149
StyI CCWWGG 1 cut(s) 2001
TaiI ACGT 8 cut(s) 26, 57, 219, 786, 1005, 1172, 1320, 2046
TaqI TCGA 5 cut(s) 85, 809, 1708, 2369, 2470
TaqII GACCGA 1 cut(s) 369
TatI WGTACW 3 cut(s) 648, 1633, 1809
TfiI GAWTC 3 cut(s) 797, 827, 1525
Tru1I TTAA 4 cut(s) 563, 1950, 2475, 2500
Tru9I TTAA 4 cut(s) 563, 1950, 2475, 2500
TscAI CASTG 5 cut(s) 109, 913, 1099, 2137, 2365
TseFI GTSAC 2 cut(s) 996, 2404
TseI GCWGC 2 cut(s) 527, 637
Tsp45I GTSAC 2 cut(s) 996, 2404
TspGWI ACGGA 1 cut(s) 1815
TspRI CASTG 5 cut(s) 109, 913, 1099, 2137, 2365
Van91I CCANNNNNTGG 3 cut(s) 258, 912, 2178
VneI GTGCAC 1 cut(s) 871
VpaK11BI GGWCC 7 cut(s) 352, 687, 1536, 1977, 2010, 2093, 2196
XapI RAATTY 3 cut(s) 111, 138, 1238
XceI RCATGY 1 cut(s) 2145
XhoI CTCGAG 1 cut(s) 808
XmiI GTMKAC 2 cut(s) 39, 609
XmnI GAANNNNTTC 1 cut(s) 2350
XspI CTAG 7 cut(s) 179, 311, 524, 546, 1475, 1974, 1985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.