FvH4_3g03310

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000099
Physical Location & Seq
Reverse (-)
1779994 .. 1783527
3534 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03310.t1

Sequence Viewer

Length: 2523 bp
ATGGATTCTCCAAAAGGCCTGCTGAATGCATTATTGCTTCAGCTCCTTCTTCTCCAGATCTCCACTTCTTTAGACACCATCAGTTTCAACCAAACCATCAAAGATGGCGAGTTTCTGGTCTCGAAAAATGATACCTTTGTGCTTGGTTTCTTTAGCCCCGGCACTTCTAGCAACTGGTACGTTGGTATATGGTACAAGTTCTCACCAGACTTGGTTGTTTGGGTGGCTAACAGAGACAACCCTGTCAATGACACCACAGGAGTTCTCACAGTTGGTTCTGATGGAAATCTAGTGCTACTTCGAAATAACAGTCTAGGCCTGCGTCTGTGGTCAACTAGTGTTTCTGTCTCATCATCAAGTAACAACACTATAGCAGCACAGCTACTGGATTCAGGAAACTTTGTTTTGGTCCAACAAGGAAATCAGAACGTTTTGTGGCAAAGCTCGGATCATCCTACACATATTCTTCTGGCAAGTATGAAACTTGGGTTCGACAGGAAAAAAGGCATCAATCGGTTTATAACTTCTTGGAACTCAAACAATGACCCGGGGACTGGAAATTGTTCATTGAGGATGGAACCAAATGGGTCTCCTCAGTTGATCTTGTACAAAAATGAGGCAAAGTGGTGGCGGTCGGGTCAATGGAATGGGATTCAGTGGGGTGGCATACCAGGAATGACCCGGAACAATGTGTTCAACATTAGTTTTATCAACAATCAGAACGAGGTTTCTGTGAGATGGAAAGTTCTTGACCCTTCAATTTACTCTGTAATAGTGGTAGATGGGTCTGGACAGATACAACAGCTAGTATGGCAGGGAAAGCAGCACGGCTGGGTTCCAGTTTGGTCAGCACCAATGGATGCTTGTGACAGCTATGGGAAGTGTGGTCCATTTGGGAATTGTAATCCCTACACTGTTAGTGGGTTCAATTGTACATGTTTTCCAGGATATGAACCCAACTCACCTCAAGATTGGGATATAAGAGACGGATCAGGTGGGTGCAAGAGGCAGGAGGGGTCAATATCAATGTGTAGAAATGGCGAAGGGTTTGTGAAGATGGATAATGTGAAGGTTCCAGATACTTCTGCAATCAAATTAGAAACAAGTTGGAGTTTGGAAGCGTGTGAGAAGGAGTGTTTAAGTAACTGCTCGTGCTTGGCGTATGGGGTTGCAGATGTGAGGAATGGTGGGAGTGGATGCATGACATGGTACGGAGATCTCATGGATACTAAGCAGTTTACAGAAGGAGGAGAGGCTTTGTATGTAAGAGCTGATGCAATAGTTTCAGCTCAGTATACAAATAAGTCAGGAGGAGAGTCCTCTGCCAACAATAAGAAACTAGCCATTATATTGGCACTGTCAATTTCTGTTACCTCATTTCTCATCATTGCTGTTTTATGTTGGTTTAAGAGAAGGAGAAATAAAGGGAGAAGAGGACAGCCAAAATTGCTGCATGATATTGCTTCTGGTTCAAGAAGCCGTGAAGACTTGTCAAATGAAAAAAATGTTGATGAACAAAGAGGAAAGGCAGATTTACCGGTTTTTGATCTAAGCACCATAGTTGAAGCCACAAAGGAGTTCTCTTCTGCTAACATGCTTGGACATGGTGGCTTTGGCATAGTCTATAAGGGAAATCTACCTGATGGACAGGAGATAGCTGTCAAAAGATTATCAAGAAATTCAGGACAAGGTGTAGAAGAATTCAAGAATGAAGTAAGGCTTATAGCAAAACTACAACATAGAAATCTTGTGAGGCTTTTTGGTTGCTGCATAGATAAAGAAGAGCGAATGCTAATTTATGAATACATGCCAAACCGAAGCTTGGACTTGTTCATTTTTGATAAAAACAAAAGGTCATTGTTGGATTGGAGAAAGCGATTTCAAATTATTATTGGGATTGCTCGGGGAGTCCTATATCTTCATCAAGATTCAAGACTGAAAATAATCCATAGGGATCTGAAAGCAAGCAATGTGCTATTGGATTCTTCACTGAACCCAAAAATATCAGACTTTGGCATGGCAAGAATGTTTGGAGATGACCAAATCGAAGCAAATACAAACAGAGTCGTTGGCACATATGGTTACATGTCACCCGAGTATGCTATGGATGGACTGTACTCAACAAAATCTGATGTGTTTAGCTTTGGAGTGTTAGCACTGGAGATTATTTGTGGCAAGAAGAACAATTTCCAATTCGAAGACTCCTCCCTGAATTTGGTTGGACAAATATGGGACTTGTGGATAGAAGGAAAAGGCTTGGACATAGTTGATTCATCATTGGGTCAGTCATATCCTACTCATGAAGCTATGAGATGCATCCAAATTGGGCTTTTATGTGTGCAAGAAAATGCAATAGATCGACCAACAATGTTGGAGGTGGTATTCATGCTGGGGAATGAAACTACTCTACAACGTCCGAAAAAGGCAGCATTTAGTTTTAAGAATAATGCTCCCGATTCTTCAACATCTAGAGGAGCTTCTTCTGTAAATGATGTAACAGTTACAGTTATAGAAGCTCGTTGA

Protein Analysis

841

Amino Acids

93.26

Weight (kDa)

7.42

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 177 1.3e-31 D-mannose binding lectin
S_locus_glycop PF00954 210 - 320 1.2e-26 S-locus glycoprotein domain
PAN_2 PF08276 344 - 410 1.1e-19 PAN-like domain
Pkinase PF00069 529 - 730 7e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 530 - 793 2e-46 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 799 - 840 2.3e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 521
AasI GACNNNNNNGTC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 1295
AciI CCGC 1 cut(s) 631
AclI AACGTT 1 cut(s) 429
AclWI GGATC 3 cut(s) 456, 997, 1962
AcsI RAATTY 3 cut(s) 1678, 1700, 2212
AcuI CTGAAG 1 cut(s) 23
AfaI GTAC 6 cut(s) 179, 194, 608, 934, 1211, 2117
AfiI CCNNNNNNNGG 3 cut(s) 554, 1822, 2215
AflIII ACRYGT 2 cut(s) 935, 2085
AgeI ACCGGT 1 cut(s) 1537
AhlI ACTAGT 1 cut(s) 335
AjnI CCWGG 2 cut(s) 670, 943
Alw26I GTCTC 5 cut(s) 124, 228, 352, 594, 978
AlwI GGATC 3 cut(s) 456, 997, 1962
AlwNI CAGNNNCTG 1 cut(s) 385
Ama87I CYCGRG 3 cut(s) 547, 1902, 2093
AoxI GGCC 2 cut(s) 16, 316
ApeKI GCWGC 5 cut(s) 374, 823, 1450, 1767, 2426
ApoI RAATTY 3 cut(s) 1678, 1700, 2212
ArsI GACNNNNNNTTYG 2 cut(s) 295, 327
AsiGI ACCGGT 1 cut(s) 1537
Asp700I GAANNNNTTC 2 cut(s) 562, 2186
AspS9I GGNCC 2 cut(s) 409, 887
AsuC2I CCSGG 4 cut(s) 159, 548, 549, 682
AsuHPI GGTGA 3 cut(s) 195, 954, 2082
AsuII TTCGAA 2 cut(s) 301, 2196
AvaI CYCGRG 3 cut(s) 547, 1902, 2093
AvaII GGWCC 2 cut(s) 409, 887
BaeI ACNNNNGTAYC 4 cut(s) 123, 156, 169, 202
BauI CACGAG 1 cut(s) 1150
BbsI GAAGAC 2 cut(s) 1491, 2205
BbvI GCAGC 5 cut(s) 386, 835, 1437, 1754, 2438
BceAI ACGGC 2 cut(s) 844, 1464
BciT130I CCWGG 2 cut(s) 672, 945
BciVI GTATCC 1 cut(s) 1219
BcnI CCSGG 4 cut(s) 159, 548, 549, 682
BcoDI GTCTC 5 cut(s) 124, 228, 352, 594, 978
BcuI ACTAGT 1 cut(s) 335
BfaI CTAG 7 cut(s) 168, 290, 314, 336, 806, 1340, 2469
BfmI CTRYAG 1 cut(s) 369
BfuI GTATCC 1 cut(s) 1219
BglII AGATCT 2 cut(s) 57, 1216
BisI GCNGC 5 cut(s) 375, 824, 1451, 1768, 2427
BlsI GCNGC 5 cut(s) 376, 825, 1452, 1769, 2428
Bme1390I CCNGG 6 cut(s) 159, 548, 549, 672, 682, 945
Bme18I GGWCC 2 cut(s) 409, 887
BmeT110I CYCGRG 3 cut(s) 547, 1902, 2093
BmgT120I GGNCC 2 cut(s) 409, 887
BmiI GGNNCC 3 cut(s) 579, 837, 1074
BmrFI CCNGG 6 cut(s) 159, 548, 549, 672, 682, 945
BmsI GCATC 6 cut(s) 516, 850, 1187, 1264, 2303, 2325
BpiI GAAGAC 2 cut(s) 1491, 2205
BpmI CTGGAG 2 cut(s) 38, 2180
Bpu14I TTCGAA 2 cut(s) 301, 2196
BpuEI CTTGAG 1 cut(s) 951
BpuMI CCSGG 4 cut(s) 159, 548, 549, 682
BsaBI GATNNNNATC 1 cut(s) 285
BsaI GGTCTC 2 cut(s) 124, 594
BsaJI CCNNGG 3 cut(s) 157, 547, 548
BsaWI WCCGGW 1 cut(s) 1537
Bsc4I CCNNNNNNNGG 3 cut(s) 554, 1822, 2215
Bse118I RCCGGY 1 cut(s) 1537
Bse1I ACTGG 5 cut(s) 179, 390, 559, 839, 2163
Bse3DI GCAATG 2 cut(s) 1386, 1975
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 2 cut(s) 672, 945
BseDI CCNNGG 3 cut(s) 157, 547, 548
BseGI GGATG 6 cut(s) 451, 579, 865, 1202, 2113, 2316
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 3 cut(s) 554, 1822, 2215
BseMI GCAATG 2 cut(s) 1386, 1975
BseMII CTCAG 2 cut(s) 608, 1304
BseNI ACTGG 5 cut(s) 179, 390, 559, 839, 2163
BseRI GAGGAG 5 cut(s) 582, 1263, 1326, 2194, 2487
BseXI GCAGC 5 cut(s) 386, 835, 1437, 1754, 2438
BseYI CCCAGC 2 cut(s) 831, 2389
Bsh1285I CGRYCG 1 cut(s) 635
BshFI GGCC 2 cut(s) 18, 318
BshTI ACCGGT 1 cut(s) 1537
BsiEI CGRYCG 1 cut(s) 635
BsiHKCI CYCGRG 3 cut(s) 547, 1902, 2093
BsiSI CCGG 4 cut(s) 159, 548, 682, 1538
BslFI GGGAC 2 cut(s) 565, 2246
BslI CCNNNNNNNGG 3 cut(s) 554, 1822, 2215
BsmAI GTCTC 5 cut(s) 124, 228, 352, 594, 978
BsmBI CGTCTC 1 cut(s) 978
BsmFI GGGAC 2 cut(s) 565, 2246
BsmI GAATGC 2 cut(s) 31, 1794
BsnI GGCC 2 cut(s) 18, 318
Bso31I GGTCTC 2 cut(s) 124, 594
BsoBI CYCGRG 3 cut(s) 547, 1902, 2093
Bsp119I TTCGAA 2 cut(s) 301, 2196
Bsp1407I TGTACA 2 cut(s) 606, 932
Bsp143I GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
BspACI CCGC 1 cut(s) 631
BspANI GGCC 2 cut(s) 18, 318
BspCNI CTCAG 2 cut(s) 607, 1303
BspHI TCATGA 1 cut(s) 2299
BspLI GGNNCC 3 cut(s) 579, 837, 1074
BspPI GGATC 3 cut(s) 456, 997, 1962
BspQI GCTCTTC 1 cut(s) 1776
BspT104I TTCGAA 2 cut(s) 301, 2196
BspTNI GGTCTC 2 cut(s) 124, 594
BsrDI GCAATG 2 cut(s) 1386, 1975
BsrFI RCCGGY 1 cut(s) 1537
BsrGI TGTACA 2 cut(s) 606, 932
BsrI ACTGG 5 cut(s) 179, 390, 559, 839, 2163
BssAI RCCGGY 1 cut(s) 1537
BssECI CCNNGG 3 cut(s) 157, 547, 548
BssMI GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
BssNAI GTATAC 1 cut(s) 1296
BssSI CACGAG 1 cut(s) 1150
Bst1107I GTATAC 1 cut(s) 1296
Bst2BI CACGAG 1 cut(s) 1150
Bst2UI CCWGG 2 cut(s) 672, 945
Bst4CI ACNGT 7 cut(s) 271, 311, 916, 1359, 2115, 2500, 2506
Bst6I CTCTTC 3 cut(s) 1426, 1588, 1776
BstAUI TGTACA 2 cut(s) 606, 932
BstBI TTCGAA 2 cut(s) 301, 2196
BstC8I GCNNGC 3 cut(s) 20, 320, 1966
BstDEI CTNAG 4 cut(s) 594, 1230, 1290, 1550
BstF5I GGATG 6 cut(s) 451, 579, 865, 1202, 2113, 2316
BstKTI GATC 8 cut(s) 60, 451, 603, 992, 1219, 1549, 1957, 2359
BstMAI GTCTC 5 cut(s) 124, 228, 352, 594, 978
BstMBI GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
BstMCI CGRYCG 1 cut(s) 635
BstMWI GCNNNNNNNGC 4 cut(s) 168, 811, 820, 1447
BstNI CCWGG 2 cut(s) 672, 945
BstNSI RCATGY 4 cut(s) 939, 1597, 1810, 2089
BstSCI CCNGG 6 cut(s) 157, 546, 547, 670, 680, 943
BstSFI CTRYAG 1 cut(s) 369
BstV1I GCAGC 5 cut(s) 386, 835, 1437, 1754, 2438
BstV2I GAAGAC 2 cut(s) 1491, 2205
BstX2I RGATCY 3 cut(s) 57, 1216, 1954
BstXI CCANNNNNNTGG 1 cut(s) 1351
BstYI RGATCY 3 cut(s) 57, 1216, 1954
BstZ17I GTATAC 1 cut(s) 1296
BsuI GTATCC 1 cut(s) 1219
BsuRI GGCC 2 cut(s) 18, 318
BtsCI GGATG 6 cut(s) 451, 579, 865, 1202, 2113, 2316
BtsIMutI CAGTG 5 cut(s) 662, 912, 1355, 1988, 2156
Cac8I GCNNGC 3 cut(s) 20, 320, 1966
CaiI CAGNNNCTG 1 cut(s) 385
CciI TCATGA 1 cut(s) 2299
Cfr10I RCCGGY 1 cut(s) 1537
Cfr13I GGNCC 2 cut(s) 409, 887
Cfr9I CCCGGG 1 cut(s) 547
CseI GACGC 1 cut(s) 311
Csp6I GTAC 6 cut(s) 178, 193, 607, 933, 1210, 2116
CspAI ACCGGT 1 cut(s) 1537
CviQI GTAC 6 cut(s) 178, 193, 607, 933, 1210, 2116
DdeI CTNAG 4 cut(s) 594, 1230, 1290, 1550
DpnI GATC 8 cut(s) 59, 450, 602, 991, 1218, 1548, 1956, 2358
DpnII GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
Eam1104I CTCTTC 3 cut(s) 1426, 1588, 1776
EarI CTCTTC 3 cut(s) 1426, 1588, 1776
Eco147I AGGCCT 2 cut(s) 18, 318
Eco31I GGTCTC 2 cut(s) 124, 594
Eco47I GGWCC 2 cut(s) 409, 887
Eco57I CTGAAG 1 cut(s) 23
Eco88I CYCGRG 3 cut(s) 547, 1902, 2093
EcoRI GAATTC 1 cut(s) 1700
EcoRII CCWGG 2 cut(s) 670, 943
EcoT22I ATGCAT 3 cut(s) 31, 1202, 2318
Esp3I CGTCTC 1 cut(s) 978
FalI AAGNNNNNCTT 2 cut(s) 1704, 1736
FaqI GGGAC 2 cut(s) 565, 2246
FauNDI CATATG 1 cut(s) 2077
FblI GTMKAC 1 cut(s) 1295
Fnu4HI GCNGC 5 cut(s) 375, 824, 1451, 1768, 2427
FokI GGATG 6 cut(s) 438, 586, 872, 1209, 2120, 2303
Fsp4HI GCNGC 5 cut(s) 375, 824, 1451, 1768, 2427
FspBI CTAG 7 cut(s) 168, 290, 314, 336, 806, 1340, 2469
GluI GCNGC 5 cut(s) 375, 824, 1451, 1768, 2427
GsaI CCCAGC 2 cut(s) 835, 2393
GsuI CTGGAG 2 cut(s) 38, 2180
HaeIII GGCC 2 cut(s) 18, 318
HapII CCGG 4 cut(s) 159, 548, 682, 1538
HgaI GACGC 1 cut(s) 311
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HindIII AAGCTT 1 cut(s) 1819
HpaII CCGG 4 cut(s) 159, 548, 682, 1538
HphI GGTGA 3 cut(s) 195, 954, 2082
Hpy166II GTNNAC 3 cut(s) 333, 1239, 1296
Hpy188I TCNGA 8 cut(s) 280, 426, 448, 720, 1959, 2008, 2131, 2418
Hpy8I GTNNAC 3 cut(s) 333, 1239, 1296
HpyAV CCTTC 8 cut(s) 56, 765, 1037, 1063, 1123, 1238, 1407, 2240
HpyCH4III ACNGT 7 cut(s) 271, 311, 916, 1359, 2115, 2500, 2506
HpyCH4IV ACGT 3 cut(s) 180, 429, 2413
HpyF10VI GCNNNNNNNGC 4 cut(s) 168, 811, 820, 1447
HpyF3I CTNAG 4 cut(s) 594, 1230, 1290, 1550
HpySE526I ACGT 3 cut(s) 180, 429, 2413
Kzo9I GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
LguI GCTCTTC 1 cut(s) 1776
LmnI GCTCC 3 cut(s) 48, 2455, 2474
Lsp1109I GCAGC 5 cut(s) 386, 835, 1437, 1754, 2438
LweI GCATC 6 cut(s) 516, 850, 1187, 1264, 2303, 2325
MaeI CTAG 7 cut(s) 168, 290, 314, 336, 806, 1340, 2469
MaeII ACGT 3 cut(s) 180, 429, 2413
MaeIII GTNAC 8 cut(s) 359, 866, 1142, 1369, 2081, 2088, 2494, 2500
MalI GATC 8 cut(s) 59, 450, 602, 991, 1218, 1548, 1956, 2358
MboI GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
MfeI CAATTG 1 cut(s) 928
MflI RGATCY 3 cut(s) 57, 1216, 1954
MlyI GAGTC 4 cut(s) 1325, 1917, 2073, 2195
MmeI TCCRAC 5 cut(s) 436, 1088, 1842, 2200, 2352
Mph1103I ATGCAT 3 cut(s) 31, 1202, 2318
MroXI GAANNNNTTC 2 cut(s) 562, 2186
MseI TTAA 3 cut(s) 1139, 1407, 2439
MspI CCGG 4 cut(s) 159, 548, 682, 1538
MspR9I CCNGG 6 cut(s) 159, 548, 549, 672, 682, 945
MunI CAATTG 1 cut(s) 928
Mva1269I GAATGC 2 cut(s) 31, 1794
MvaI CCWGG 2 cut(s) 672, 945
MwoI GCNNNNNNNGC 4 cut(s) 168, 811, 820, 1447
NciI CCSGG 4 cut(s) 159, 548, 549, 682
NdeI CATATG 1 cut(s) 2077
NdeII GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
NlaIV GGNNCC 3 cut(s) 579, 837, 1074
NmuCI GTSAC 2 cut(s) 866, 2088
NsiI ATGCAT 3 cut(s) 31, 1202, 2318
NspI RCATGY 4 cut(s) 939, 1597, 1810, 2089
NspV TTCGAA 2 cut(s) 301, 2196
PagI TCATGA 1 cut(s) 2299
PceI AGGCCT 2 cut(s) 18, 318
PciI ACATGT 2 cut(s) 935, 2085
PciSI GCTCTTC 1 cut(s) 1776
PcsI WCGNNNNNNNCGW 1 cut(s) 1157
PctI GAATGC 2 cut(s) 31, 1794
PdmI GAANNNNTTC 2 cut(s) 562, 2186
PfeI GAWTC 7 cut(s) 5, 389, 652, 1928, 1982, 2270, 2456
PfoI TCCNGGA 1 cut(s) 943
PinAI ACCGGT 1 cut(s) 1537
PkrI GCNGC 5 cut(s) 376, 825, 1452, 1769, 2428
PleI GAGTC 4 cut(s) 1324, 1916, 2072, 2195
PpsI GAGTC 4 cut(s) 1324, 1916, 2072, 2195
PscI ACATGT 2 cut(s) 935, 2085
PsiI TTATAA 1 cut(s) 521
Psp1406I AACGTT 1 cut(s) 429
Psp6I CCWGG 2 cut(s) 670, 943
PspFI CCCAGC 2 cut(s) 831, 2389
PspGI CCWGG 2 cut(s) 670, 943
PspN4I GGNNCC 3 cut(s) 579, 837, 1074
PspPI GGNCC 2 cut(s) 409, 887
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 3 cut(s) 57, 1216, 1954
RsaI GTAC 6 cut(s) 179, 194, 608, 934, 1211, 2117
RsaNI GTAC 6 cut(s) 178, 193, 607, 933, 1210, 2116
SapI GCTCTTC 1 cut(s) 1776
SaqAI TTAA 3 cut(s) 1139, 1407, 2439
SatI GCNGC 5 cut(s) 375, 824, 1451, 1768, 2427
Sau3AI GATC 8 cut(s) 57, 448, 600, 989, 1216, 1546, 1954, 2356
Sau96I GGNCC 2 cut(s) 409, 887
SchI GAGTC 4 cut(s) 1325, 1917, 2073, 2195
ScrFI CCNGG 6 cut(s) 159, 548, 549, 672, 682, 945
SfaNI GCATC 6 cut(s) 516, 850, 1187, 1264, 2303, 2325
SfcI CTRYAG 1 cut(s) 369
SfuI TTCGAA 2 cut(s) 301, 2196
SinI GGWCC 2 cut(s) 409, 887
SmaI CCCGGG 1 cut(s) 549
SmlI CTYRAG 1 cut(s) 966
SmoI CTYRAG 1 cut(s) 966
SpeI ACTAGT 1 cut(s) 335
SseBI AGGCCT 2 cut(s) 18, 318
SsiI CCGC 1 cut(s) 631
SspMI CTAG 7 cut(s) 168, 290, 314, 336, 806, 1340, 2469
StuI AGGCCT 2 cut(s) 18, 318
StyD4I CCNGG 6 cut(s) 157, 546, 547, 670, 680, 943
TaaI ACNGT 7 cut(s) 271, 311, 916, 1359, 2115, 2500, 2506
TaiI ACGT 3 cut(s) 183, 432, 2416
TaqI TCGA 6 cut(s) 122, 301, 492, 2046, 2196, 2359
TatI WGTACW 3 cut(s) 606, 932, 2115
TfiI GAWTC 7 cut(s) 5, 389, 652, 1928, 1982, 2270, 2456
Tru1I TTAA 3 cut(s) 1139, 1407, 2439
Tru9I TTAA 3 cut(s) 1139, 1407, 2439
TscAI CASTG 5 cut(s) 662, 919, 1362, 1995, 2163
TseFI GTSAC 2 cut(s) 866, 2088
TseI GCWGC 5 cut(s) 374, 823, 1450, 1767, 2426
Tsp45I GTSAC 2 cut(s) 866, 2088
TspGWI ACGGA 2 cut(s) 1002, 1227
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 5 cut(s) 662, 919, 1362, 1995, 2163
VpaK11BI GGWCC 2 cut(s) 409, 887
XapI RAATTY 3 cut(s) 1678, 1700, 2212
XbaI TCTAGA 1 cut(s) 2468
XceI RCATGY 4 cut(s) 939, 1597, 1810, 2089
XmaI CCCGGG 1 cut(s) 547
XmiI GTMKAC 1 cut(s) 1295
XmnI GAANNNNTTC 2 cut(s) 562, 2186
XspI CTAG 7 cut(s) 168, 290, 314, 336, 806, 1340, 2469
Zsp2I ATGCAT 3 cut(s) 31, 1202, 2318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.