MD05G1332600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000099
Physical Location & Seq
Forward (+)
45608487 .. 45613271
4785 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1332600.v1.1.491

Sequence Viewer

Length: 2544 bp
ATGAGAAAGCTAACAATGAATTCTACTGAATTCTTTTTTGTCAGTACTGTTTTGCTCATCTTCCTTGTGATTCTTCCCTCTTCCATTTCGGTTACCCTAGACGCCATTACATCAAGCCAACCCCTAAGAGAGGACGACGTTCTTCTCTCCACCACTAAAATCTTTGCACTAGGGTTTTTTAAGCCAGGCAGTTCTCGTAACCGTTACATCGGAGTTTGGTACAACAAAATTCCAATCAAAACCATTGTCTGGATTGCAAACAGAGAAAACCCCATAGTTCCTACTGCTGGAAATGGACTTCTAGCCATTCATGGAGATCATGGTGGCCTTGTTATTTATGGGGAGGACCAAAACACCCCTATCTGGTCCGCTAATCTCACCGTCTCTTCTCCAAACAATTCCGTGATAGCCAAGCTTTCGAATAAGGGAAATCTTGTTGTTGAAATTAATGGTGAAAAGGTGTGGCAAGGTTTTGATTATCCCACAAATACGATGCTTCCCTTTATGAAAATTGGGCTGGACAGGCGGTCCAGATTGAACCGTTTCCTCACATCTTGGAAGTCCCAAGATGATCCGGGAATGGGCAACTGTTCGTTCCGGATGGAGCCAAGTGAGAGTCCACAGGAGTTCTTATACAAGGGTCAGACTCGATTGTGGCGGACTGGACCTTGGACCGGTGAAAGATGGTCCGGGGTGCCTGCAATGGTAAAACTATTCTTCACCAACGTTACTTTTGTGAACAATCAAGATGAGGTATCCATCATGGATCTAGTTCCTGAATCAAGCTTCGTAAAATTGGTGATCGATGAATCAGGAAACATTGAACGGTCCGCATGGGACGATGAAGTGCATAAATGGGTCCCGCATTGGTCGCCGGATTGGCAGTGTGATTCTTACGGGGTGTGTGGTCCGAATAGCATTTGTTACCCATACCCAAACTTTGAAGATAAATTTGAGTGCAAATGCCTACCTGGATTCGAACCCAAGTTGCAACATGAGTGGTATTTGAGAGATTGGTCAGGCGGGTGCGTGAGGCAAAAGGGTCCATCCGTTTGCCAAAACGGGGAAGGGTTCGTGAAGTTGGAACGTGTGAAGGTGCCGGACACTTCTACGGCACGTGTGAACATGAGTAGGAGTCGGGAAGCATGTAAAGAAGAATGCCTGAGAAATTGTTCTTGCACGGCATACGCAAATGCAGATGAAAGGCAGGGAGGGAGTGGCTGTATAACATGGCATGGGGACTTGATGGACGCAAGGACTTATTTGGATACGGGTCAAGATTTATATGTGCGAGTTGATGCAAATGTTTCAGCTCAATACGCAAAGAAGTCAAACAGTTTTTTTGGCAAGAAGAGGAAGCTGGAAGTTTCAGTAGCATTTGGTCTATTGTTCTTCCTCTTGTTTTCCCTTGCATGTTGGTTGGTAAAGAGGAAGAGAAAAGGTCAGAGAAGTCAGGATAAATTTTTCAATGCGACCATAGCATCAACCTCCTGGGAAGATTCTTCTACTAGAACAAATATTGATGAAAGTGGAATAAACTCCGAATTACCATTCTTTGAACTAAGTGCCATAGTTAAGGCCACAAATAATTTTGCTTCCAACAACAAGCTTGGAACAGGTGGTTTCGGCTCCGTTTATAAGGGTGTGCTTGATAATGGAAAGGAGATAGCAGTGAAAAGACTAGCCAAGAATTCTGGCCAAGGAATTGGAGAGTTTAAGAATGAAGTTCTGCTGCTTTCAAAGCTCCAACACAGGAACCTTGTGAGGATCATGGGTTGCTGCGTTCAAGATGAAGAGAAGATGTTGATCTATGAATACTTGCCAAACAAAAGTCTTGACTTTTTCATTTTCGCAAAAGGGGAGTTCTTGGATTGGACAAGATGCTTTGAGATAATCTGTGGGATTGCTAGAGGGATCTTATATCTTCATCAGGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCCAGCAATGTTCTGTTGGATTCTGCTATGAACCCCAAGATTTCAGATTTTGGTATGGCTAGGATATTTGGAGCTGAACAAATTGAAGCAAATACAAACCGTGTGGTTGGGACATACGGTTATATGTCACCAGAGTACGCAATGGAAGGACTTTTTTCAGTAAAGTCTGACGTATATAGCTTCGGTGTTTTACTACTAGAAATTGTTACTGGCAGAAAGAACATCGGCTACCACCACGATAGTCCTTACTCAAATTTAGTTGGACATGTTTGGGACTTGTGGAAGGAAAATAGAGCCTTGGAAATCATTGATTCATCTTTAGGAGAATCATACCCTGTCAACAAAGTTCTAAGATGTATTCACATTGCCCTCTTGTGCGTGCAAGAGCAAGCGAAGGATCGTCCACTCATGTCAGCAGTGGTTTCCATGTTGGGTAATGATGCTGCAATTCCTTCACCAAAGCAACCTGGATTTTTGTTGAAGAGTGGTTATCATAGTAGTGGAGACCCATCAACCAATACTGATGGAGCTTGCTCTGTAAATGACATGACCTATACAGAAGCAGAAGGTCGCTAA

Protein Analysis

848

Amino Acids

95.11

Weight (kDa)

7.16

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 81 - 187 3.2e-27 D-mannose binding lectin
S_locus_glycop PF00954 219 - 329 5.8e-23 S-locus glycoprotein domain
PAN_2 PF08276 352 - 417 7.3e-23 PAN-like domain
Pkinase PF00069 532 - 736 3.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 534 - 800 1.1e-48 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 802 - 847 5.5e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1638
AccB1I GGYRCC 2 cut(s) 694, 1096
AccB7I CCANNNNNTGG 1 cut(s) 249
AccIII TCCGGA 1 cut(s) 597
AciI CCGC 6 cut(s) 369, 526, 658, 831, 863, 1023
AclI AACGTT 1 cut(s) 726
AclWI GGATC 5 cut(s) 566, 774, 1775, 1922, 2373
AcoI YGGCCR 1 cut(s) 1696
AcsI RAATTY 7 cut(s) 19, 29, 228, 950, 1460, 1690, 2221
AcvI CACGTG 1 cut(s) 1118
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 3 cut(s) 46, 221, 2105
AfiI CCNNNNNNNGG 7 cut(s) 130, 249, 287, 363, 581, 674, 1063
AflIII ACRYGT 3 cut(s) 1087, 1117, 2233
AgeI ACCGGT 1 cut(s) 674
AhdI GACNNNNNGTC 1 cut(s) 526
AjnI CCWGG 4 cut(s) 184, 970, 1490, 2434
Alw26I GTCTC 2 cut(s) 388, 2466
AlwI GGATC 5 cut(s) 566, 774, 1775, 1922, 2373
Aor13HI TCCGGA 1 cut(s) 597
AoxI GGCC 4 cut(s) 325, 1578, 1696, 1968
ApeKI GCWGC 3 cut(s) 1732, 1779, 2411
ApoI RAATTY 7 cut(s) 19, 29, 228, 950, 1460, 1690, 2221
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
AseI ATTAAT 1 cut(s) 447
AsiGI ACCGGT 1 cut(s) 674
Asp700I GAANNNNTTC 2 cut(s) 542, 1171
AsuC2I CCSGG 2 cut(s) 576, 691
AsuHPI GGTGA 7 cut(s) 370, 464, 689, 712, 811, 2088, 2415
AsuII TTCGAA 2 cut(s) 419, 978
BalI TGGCCA 1 cut(s) 1698
BanI GGYRCC 2 cut(s) 694, 1096
BbrPI CACGTG 1 cut(s) 1118
BbvI GCAGC 3 cut(s) 1719, 1766, 2398
BccI CCATC 7 cut(s) 595, 678, 767, 1054, 1240, 2485, 2486
BceAI ACGGC 2 cut(s) 1128, 1197
BciT130I CCWGG 4 cut(s) 186, 972, 1492, 2436
BciVI GTATCC 2 cut(s) 766, 1261
BcnI CCSGG 2 cut(s) 576, 691
BcoDI GTCTC 2 cut(s) 388, 2466
BfaI CTAG 9 cut(s) 98, 170, 302, 770, 1509, 1682, 1908, 2028, 2165
BfuI GTATCC 2 cut(s) 766, 1261
BglI GCCNNNNNGGC 1 cut(s) 880
BglII AGATCT 1 cut(s) 1960
BisI GCNGC 3 cut(s) 1733, 1780, 2412
BlsI GCNGC 3 cut(s) 1734, 1781, 2413
BmcAI AGTACT 1 cut(s) 46
Bme1390I CCNGG 6 cut(s) 186, 576, 691, 972, 1492, 2436
BmeRI GACNNNNNGTC 1 cut(s) 526
BmiI GGNNCC 8 cut(s) 606, 696, 860, 861, 1044, 1098, 1630, 1757
BmrFI CCNGG 6 cut(s) 186, 576, 691, 972, 1492, 2436
BmsI GCATC 5 cut(s) 483, 1288, 1490, 1871, 2398
Bpu14I TTCGAA 2 cut(s) 419, 978
BpuMI CCSGG 2 cut(s) 576, 691
Bsa29I ATCGAT 1 cut(s) 804
BsaAI YACGTR 1 cut(s) 1118
BsaBI GATNNNNATC 1 cut(s) 1805
BsaHI GRCGYC 1 cut(s) 102
BsaI GGTCTC 1 cut(s) 2466
BsaJI CCNNGG 5 cut(s) 668, 690, 1491, 1699, 2265
BsaWI WCCGGW 2 cut(s) 597, 674
BsaXI ACNNNNNCTCC 2 cut(s) 1207, 1237
Bsc4I CCNNNNNNNGG 7 cut(s) 130, 249, 287, 363, 581, 674, 1063
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 2 cut(s) 667, 2182
Bse3DI GCAATG 4 cut(s) 708, 1981, 2115, 2331
Bse8I GATNNNNATC 1 cut(s) 1805
BseAI TCCGGA 1 cut(s) 597
BseBI CCWGG 4 cut(s) 186, 972, 1492, 2436
BseCI ATCGAT 1 cut(s) 804
BseDI CCNNGG 5 cut(s) 668, 690, 1491, 1699, 2265
BseGI GGATG 3 cut(s) 606, 1046, 1950
BseJI GATNNNNATC 1 cut(s) 1805
BseLI CCNNNNNNNGG 7 cut(s) 130, 249, 287, 363, 581, 674, 1063
BseMI GCAATG 4 cut(s) 708, 1981, 2115, 2331
BseMII CTCAG 1 cut(s) 1154
BseNI ACTGG 2 cut(s) 667, 2182
BseXI GCAGC 3 cut(s) 1719, 1766, 2398
BshFI GGCC 4 cut(s) 327, 1580, 1698, 1970
BshNI GGYRCC 2 cut(s) 694, 1096
BshTI ACCGGT 1 cut(s) 674
BshVI ATCGAT 1 cut(s) 804
BsiSI CCGG 6 cut(s) 575, 598, 675, 690, 875, 1100
BslFI GGGAC 6 cut(s) 547, 845, 851, 1253, 2092, 2255
BslI CCNNNNNNNGG 7 cut(s) 130, 249, 287, 363, 581, 674, 1063
BsmAI GTCTC 2 cut(s) 388, 2466
BsmBI CGTCTC 1 cut(s) 388
BsmFI GGGAC 6 cut(s) 547, 845, 851, 1253, 2092, 2255
BsmI GAATGC 1 cut(s) 1163
BsnI GGCC 4 cut(s) 327, 1580, 1698, 1970
Bso31I GGTCTC 1 cut(s) 2466
Bsp119I TTCGAA 2 cut(s) 419, 978
Bsp13I TCCGGA 1 cut(s) 597
Bsp143I GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
BspACI CCGC 6 cut(s) 369, 526, 658, 831, 863, 1023
BspANI GGCC 4 cut(s) 327, 1580, 1698, 1970
BspCNI CTCAG 1 cut(s) 1155
BspDI ATCGAT 1 cut(s) 804
BspEI TCCGGA 1 cut(s) 597
BspLI GGNNCC 8 cut(s) 606, 696, 860, 861, 1044, 1098, 1630, 1757
BspPI GGATC 5 cut(s) 566, 774, 1775, 1922, 2373
BspT104I TTCGAA 2 cut(s) 419, 978
BspT107I GGYRCC 2 cut(s) 694, 1096
BspTNI GGTCTC 1 cut(s) 2466
BsrDI GCAATG 4 cut(s) 708, 1981, 2115, 2331
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 2 cut(s) 667, 2182
BssAI RCCGGY 1 cut(s) 674
BssECI CCNNGG 5 cut(s) 668, 690, 1491, 1699, 2265
BssMI GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
BssNI GRCGYC 1 cut(s) 102
BssT1I CCWWGG 3 cut(s) 668, 1699, 2265
Bst2UI CCWGG 4 cut(s) 186, 972, 1492, 2436
Bst4CI ACNGT 9 cut(s) 49, 203, 382, 542, 590, 828, 1337, 2069, 2087
Bst6I CTCTTC 6 cut(s) 85, 391, 1346, 1427, 1788, 2444
BstACI GRCGYC 1 cut(s) 102
BstBAI YACGTR 1 cut(s) 1118
BstBI TTCGAA 2 cut(s) 419, 978
BstC8I GCNNGC 5 cut(s) 699, 1972, 2348, 2358, 2500
BstDEI CTNAG 4 cut(s) 125, 1163, 1562, 2318
BstEII GGTNACC 1 cut(s) 91
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 3 cut(s) 606, 1046, 1950
BstKTI GATC 9 cut(s) 319, 574, 769, 804, 1770, 1809, 1917, 1963, 2368
BstMAI GTCTC 2 cut(s) 388, 2466
BstMBI GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
BstMWI GCNNNNNNNGC 6 cut(s) 523, 871, 880, 1319, 1478, 1741
BstNI CCWGG 4 cut(s) 186, 972, 1492, 2436
BstNSI RCATGY 3 cut(s) 1149, 1416, 2237
BstPI GGTNACC 1 cut(s) 91
BstSCI CCNGG 6 cut(s) 184, 574, 689, 970, 1490, 2434
BstV1I GCAGC 3 cut(s) 1719, 1766, 2398
BstX2I RGATCY 3 cut(s) 766, 1914, 1960
BstXI CCANNNNNNTGG 1 cut(s) 1706
BstYI RGATCY 3 cut(s) 766, 1914, 1960
Bsu15I ATCGAT 1 cut(s) 804
BsuI GTATCC 2 cut(s) 766, 1261
BsuRI GGCC 4 cut(s) 327, 1580, 1698, 1970
BsuTUI ATCGAT 1 cut(s) 804
BtsCI GGATG 3 cut(s) 606, 1046, 1950
BtsI GCAGTG 3 cut(s) 890, 1677, 2391
BtsIMutI CAGTG 3 cut(s) 890, 1677, 2391
Cac8I GCNNGC 5 cut(s) 699, 1972, 2348, 2358, 2500
Cfr10I RCCGGY 1 cut(s) 674
ClaI ATCGAT 1 cut(s) 804
CpoI CGGWCCG 1 cut(s) 828
CseI GACGC 2 cut(s) 110, 1259
Csp6I GTAC 3 cut(s) 45, 220, 2104
CspAI ACCGGT 1 cut(s) 674
CspCI CAANNNNNGTGG 4 cut(s) 980, 1015, 2052, 2087
CspI CGGWCCG 1 cut(s) 828
CviQI GTAC 3 cut(s) 45, 220, 2104
DdeI CTNAG 4 cut(s) 125, 1163, 1562, 2318
DpnI GATC 9 cut(s) 318, 573, 768, 803, 1769, 1808, 1916, 1962, 2367
DpnII GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
DriI GACNNNNNGTC 1 cut(s) 526
EaeI YGGCCR 1 cut(s) 1696
Eam1104I CTCTTC 6 cut(s) 85, 391, 1346, 1427, 1788, 2444
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 6 cut(s) 85, 391, 1346, 1427, 1788, 2444
EciI GGCGGA 1 cut(s) 673
Eco130I CCWWGG 3 cut(s) 668, 1699, 2265
Eco31I GGTCTC 1 cut(s) 2466
Eco72I CACGTG 1 cut(s) 1118
Eco91I GGTNACC 1 cut(s) 91
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoO109I RGGNCCY 1 cut(s) 859
EcoO65I GGTNACC 1 cut(s) 91
EcoRI GAATTC 3 cut(s) 19, 29, 1690
EcoRII CCWGG 4 cut(s) 184, 970, 1490, 2434
EcoT14I CCWWGG 3 cut(s) 668, 1699, 2265
ErhI CCWWGG 3 cut(s) 668, 1699, 2265
Esp3I CGTCTC 1 cut(s) 388
FaqI GGGAC 6 cut(s) 547, 845, 851, 1253, 2092, 2255
FauI CCCGC 2 cut(s) 870, 1016
Fnu4HI GCNGC 3 cut(s) 1733, 1780, 2412
FokI GGATG 3 cut(s) 613, 1033, 1937
Fsp4HI GCNGC 3 cut(s) 1733, 1780, 2412
FspBI CTAG 9 cut(s) 98, 170, 302, 770, 1509, 1682, 1908, 2028, 2165
GluI GCNGC 3 cut(s) 1733, 1780, 2412
HaeIII GGCC 4 cut(s) 327, 1580, 1698, 1970
HapII CCGG 6 cut(s) 575, 598, 675, 690, 875, 1100
HgaI GACGC 2 cut(s) 110, 1259
Hin1I GRCGYC 1 cut(s) 102
HincII GTYRAC 1 cut(s) 2308
HindII GTYRAC 1 cut(s) 2308
HindIII AAGCTT 3 cut(s) 413, 784, 1607
HpaII CCGG 6 cut(s) 575, 598, 675, 690, 875, 1100
HphI GGTGA 7 cut(s) 370, 464, 689, 712, 811, 2088, 2415
Hpy166II GTNNAC 5 cut(s) 620, 739, 1123, 2308, 2372
Hpy188I TCNGA 7 cut(s) 212, 645, 912, 1446, 1543, 2014, 2137
Hpy8I GTNNAC 5 cut(s) 620, 739, 1123, 2308, 2372
Hpy99I CGWCG 1 cut(s) 140
HpyAV CCTTC 7 cut(s) 1061, 1087, 2108, 2245, 2356, 2430, 2528
HpyCH4III ACNGT 9 cut(s) 49, 203, 382, 542, 590, 828, 1337, 2069, 2087
HpyCH4IV ACGT 5 cut(s) 138, 726, 1087, 1117, 2139
HpyF10VI GCNNNNNNNGC 6 cut(s) 523, 871, 880, 1319, 1478, 1741
HpyF3I CTNAG 4 cut(s) 125, 1163, 1562, 2318
HpySE526I ACGT 5 cut(s) 138, 726, 1087, 1117, 2139
Hsp92I GRCGYC 1 cut(s) 102
KflI GGGWCCC 1 cut(s) 859
Kpn2I TCCGGA 1 cut(s) 597
Kzo9I GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
LmnI GCTCC 5 cut(s) 604, 1634, 1749, 2039, 2495
Lsp1109I GCAGC 3 cut(s) 1719, 1766, 2398
LweI GCATC 5 cut(s) 483, 1288, 1490, 1871, 2398
MaeI CTAG 9 cut(s) 98, 170, 302, 770, 1509, 1682, 1908, 2028, 2165
MaeII ACGT 5 cut(s) 138, 726, 1087, 1117, 2139
MaeIII GTNAC 7 cut(s) 91, 197, 203, 727, 923, 2094, 2173
MalI GATC 9 cut(s) 318, 573, 768, 803, 1769, 1808, 1916, 1962, 2367
MboI GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
MflI RGATCY 3 cut(s) 766, 1914, 1960
MlsI TGGCCA 1 cut(s) 1698
MluNI TGGCCA 1 cut(s) 1698
MlyI GAGTC 3 cut(s) 625, 640, 1144
MmeI TCCRAC 5 cut(s) 1062, 1623, 1771, 1965, 2209
Mox20I TGGCCA 1 cut(s) 1698
MroI TCCGGA 1 cut(s) 597
MroXI GAANNNNTTC 2 cut(s) 542, 1171
MscI TGGCCA 1 cut(s) 1698
MseI TTAA 5 cut(s) 180, 447, 1575, 1716, 1943
MslI CAYNNNNRTG 1 cut(s) 2466
Msp20I TGGCCA 1 cut(s) 1698
MspI CCGG 6 cut(s) 575, 598, 675, 690, 875, 1100
MspR9I CCNGG 6 cut(s) 186, 576, 691, 972, 1492, 2436
Mva1269I GAATGC 1 cut(s) 1163
MvaI CCWGG 4 cut(s) 186, 972, 1492, 2436
MwoI GCNNNNNNNGC 6 cut(s) 523, 871, 880, 1319, 1478, 1741
NciI CCSGG 2 cut(s) 576, 691
NdeII GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
NlaIV GGNNCC 8 cut(s) 606, 696, 860, 861, 1044, 1098, 1630, 1757
NmuCI GTSAC 1 cut(s) 2094
NspI RCATGY 3 cut(s) 1149, 1416, 2237
NspV TTCGAA 2 cut(s) 419, 978
PciI ACATGT 1 cut(s) 2233
PctI GAATGC 1 cut(s) 1163
PdmI GAANNNNTTC 2 cut(s) 542, 1171
PflMI CCANNNNNTGG 1 cut(s) 249
PfoI TCCNGGA 1 cut(s) 574
PinAI ACCGGT 1 cut(s) 674
PkrI GCNGC 3 cut(s) 1734, 1781, 2413
PleI GAGTC 3 cut(s) 624, 640, 1143
PmaCI CACGTG 1 cut(s) 1118
PmlI CACGTG 1 cut(s) 1118
PpsI GAGTC 3 cut(s) 624, 640, 1143
Ppu21I YACGTR 1 cut(s) 1118
PpuMI RGGWCCY 1 cut(s) 859
PscI ACATGT 1 cut(s) 2233
PshBI ATTAAT 1 cut(s) 447
PsiI TTATAA 1 cut(s) 1638
Psp1406I AACGTT 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 859
Psp6I CCWGG 4 cut(s) 184, 970, 1490, 2434
PspCI CACGTG 1 cut(s) 1118
PspEI GGTNACC 1 cut(s) 91
PspGI CCWGG 4 cut(s) 184, 970, 1490, 2434
PspN4I GGNNCC 8 cut(s) 606, 696, 860, 861, 1044, 1098, 1630, 1757
PspPPI RGGWCCY 1 cut(s) 859
PsrI GAACNNNNNNTAC 2 cut(s) 2180, 2212
PsuI RGATCY 3 cut(s) 766, 1914, 1960
RsaI GTAC 3 cut(s) 46, 221, 2105
RsaNI GTAC 3 cut(s) 45, 220, 2104
RseI CAYNNNNRTG 1 cut(s) 2466
Rsr2I CGGWCCG 1 cut(s) 828
RsrII CGGWCCG 1 cut(s) 828
SaqAI TTAA 5 cut(s) 180, 447, 1575, 1716, 1943
SatI GCNGC 3 cut(s) 1733, 1780, 2412
Sau3AI GATC 9 cut(s) 316, 571, 766, 801, 1767, 1806, 1914, 1960, 2365
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 3 cut(s) 625, 640, 1144
ScrFI CCNGG 6 cut(s) 186, 576, 691, 972, 1492, 2436
SfaNI GCATC 5 cut(s) 483, 1288, 1490, 1871, 2398
SfuI TTCGAA 2 cut(s) 419, 978
SmiMI CAYNNNNRTG 1 cut(s) 2466
SsiI CCGC 6 cut(s) 369, 526, 658, 831, 863, 1023
SspI AATATT 1 cut(s) 1519
SspMI CTAG 9 cut(s) 98, 170, 302, 770, 1509, 1682, 1908, 2028, 2165
StyD4I CCNGG 6 cut(s) 184, 574, 689, 970, 1490, 2434
StyI CCWWGG 3 cut(s) 668, 1699, 2265
TaaI ACNGT 9 cut(s) 49, 203, 382, 542, 590, 828, 1337, 2069, 2087
TaiI ACGT 5 cut(s) 141, 729, 1090, 1120, 2142
TaqI TCGA 4 cut(s) 419, 649, 804, 978
TatI WGTACW 1 cut(s) 44
Tru1I TTAA 5 cut(s) 180, 447, 1575, 1716, 1943
Tru9I TTAA 5 cut(s) 180, 447, 1575, 1716, 1943
TscAI CASTG 3 cut(s) 890, 1677, 2391
TseFI GTSAC 1 cut(s) 2094
TseI GCWGC 3 cut(s) 1732, 1779, 2411
Tsp45I GTSAC 1 cut(s) 2094
TspGWI ACGGA 3 cut(s) 391, 1039, 1621
TspRI CASTG 3 cut(s) 890, 1677, 2391
Van91I CCANNNNNTGG 1 cut(s) 249
VspI ATTAAT 1 cut(s) 447
XagI CCTNNNNNAGG 1 cut(s) 128
XapI RAATTY 7 cut(s) 19, 29, 228, 950, 1460, 1690, 2221
XceI RCATGY 3 cut(s) 1149, 1416, 2237
XmnI GAANNNNTTC 2 cut(s) 542, 1171
XspI CTAG 9 cut(s) 98, 170, 302, 770, 1509, 1682, 1908, 2028, 2165
ZrmI AGTACT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.