Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006173.1

Orthogroup ID

OG0000099

Physical Location & Seq

Genomic Coordinates Reverse (-)

18561 .. 20440

Gene Structure 1880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006173.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

atgagttccagtatcgaagcgtttatccagatattgcttctcttccttcttctcccctctagcatttgccagcttccccttgacgcccttacgctagaccgtcccatcagagtcgacggcgacgttttagtctctagcaaccaaatctttgtactagggttcttcagcctcggaaattctggggaccactacgctggagtttggtataacaagattccagaaaaaaccattgtctgggttgcgaacagagacaacccagtcaatgattcctatggagtgctatcgatcaacggtgatggaggccttgtcatacatggaaaggacccaactacccctctttggtccgcaaacgttactctctcttcaccaaacaatttcacagcgaagcttttggatacagggaatcttgttttacttgagaatggtagccaaagagttgtgtgggaaggctttgattacccctcagatacactgcttccctctatgaagattgggctgaaccggcggtcagggttggagaagcacctaacatcttggaaatcaaaagatgaccctggaaccgggagttgtacatgtgggataaacccgatgggggttctgcagttgtttctgcgcaagggtagagacgcattgtggcggtgcggcccttggactgggcacagattgagcggtaccgctggagactacaagtcaagtattgtcaacaatgaagacgagatatccttcgcgtatttggactcagagatcacagagatcacaaggatcgtgatagatgaatcaggaatacttcaagggttcacgtggaaggatcaatggatcaaattctactcctacccgactgggtggtgtgattcctacggacagtgcggtccaaatactaactgtgacccagccaaggattataagttggcttgcacgtgcctacctgggttcgaatccaaatcacctaggtcgagtcttggtgagggtggatgcattaggaaagcggaagcctccacatgtcaaaatggagaaggcttcgtgaaggtggcgagtgtaaaactaccggactcgtctacggcacgtgtgaacatgagcacgagtttggaagagtgcagacaaaagtgcttgatggattgttcttgcacatcatacacgagtgcggacgaccgggacggtgggatcgggtgcttgacatggcacggggacttgatggacatgaggactttcgcagatgttggtcaagatttatatgttcgagtcgatgtaacttttttaggtactaggcaaggagacccaggaaccaaaagcttcccagtgcccaaatctcgagaatcctccgtcgttactactcaaaaggatttgctagaggcacgaaagtgcgtagttccctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

457

Amino Acids

50.04

Weight (kDa)

5.23

Isoelectric Point (pI)

40.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca	FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica	MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica	Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis	pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis	RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata	RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora	Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa	Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha	Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana	Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	903
AasI	GACNNNNNNGTC	3 cut(s)	128, 257, 867
Acc16I	TGCGCA	1 cut(s)	614
Acc65I	GGTACC	1 cut(s)	671
AccB1I	GGYRCC	1 cut(s)	671
AccB7I	CCANNNNNTGG	1 cut(s)	234
AccBSI	CCGCTC	1 cut(s)	669
AccI	GTMKAC	2 cut(s)	114, 1055
AccII	CGCG	1 cut(s)	728
AciI	CCGC	9 cut(s)	345, 505, 637, 642, 669, 675, 867, 986, 1142
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	4 cut(s)	770, 816, 824, 1169
AcsI	RAATTY	2 cut(s)	175, 821
AcuI	CTGAAG	1 cut(s)	148
AcvI	CACGTG	3 cut(s)	801, 918, 1064
AcyI	GRCGYC	1 cut(s)	84
AfaI	GTAC	4 cut(s)	153, 571, 673, 1261
AfiI	CCNNNNNNNGG	6 cut(s)	234, 339, 560, 592, 653, 895
AflIII	ACRYGT	3 cut(s)	572, 998, 1063
AgsI	TTSAA	1 cut(s)	791
AhdI	GACNNNNNGTC	1 cut(s)	688
AjnI	CCWGG	3 cut(s)	553, 925, 1276
AleI	CACNNNNGTG	1 cut(s)	1357
AluBI	AGCT	3 cut(s)	73, 388, 1290
AluI	AGCT	3 cut(s)	73, 388, 1290
Alw21I	GWGCWC	1 cut(s)	1079
Alw26I	GTCTC	5 cut(s)	136, 243, 618, 675, 1266
AlwI	GGATC	4 cut(s)	770, 816, 824, 1169
Ama87I	CYCGRG	1 cut(s)	1308
AoxI	GGCC	2 cut(s)	301, 643
ApoI	RAATTY	2 cut(s)	175, 821
Asp718I	GGTACC	1 cut(s)	671
AspA2I	CCTAGG	1 cut(s)	947
AspLEI	GCGC	1 cut(s)	615
AspS9I	GGNCC	5 cut(s)	184, 322, 342, 644, 869
AsuC2I	CCSGG	2 cut(s)	562, 1151
AsuHPI	GGTGA	4 cut(s)	305, 357, 936, 974
AsuII	TTCGAA	1 cut(s)	933
AvaI	CYCGRG	1 cut(s)	1308
AvaII	GGWCC	4 cut(s)	184, 322, 342, 869
AvrII	CCTAGG	1 cut(s)	947
BaeGI	GKGCMC	2 cut(s)	660, 1302
BanI	GGYRCC	1 cut(s)	671
BauI	CACGAG	2 cut(s)	1078, 1135
BbrPI	CACGTG	3 cut(s)	801, 918, 1064
BbsI	GAAGAC	1 cut(s)	717
Bbv12I	GWGCWC	1 cut(s)	1079
BccI	CCATC	5 cut(s)	113, 290, 583, 1105, 1186
BceAI	ACGGC	2 cut(s)	133, 1074
BciT130I	CCWGG	3 cut(s)	555, 927, 1278
BciVI	GTATCC	1 cut(s)	388
BcnI	CCSGG	2 cut(s)	562, 1151
BcoDI	GTCTC	5 cut(s)	136, 243, 618, 675, 1266
BfaI	CTAG	7 cut(s)	60, 95, 135, 155, 948, 1263, 1346
BfmI	CTRYAG	1 cut(s)	599
BfuI	GTATCC	1 cut(s)	388
BisI	GCNGC	1 cut(s)	643
BlnI	CCTAGG	1 cut(s)	947
BlsI	GCNGC	1 cut(s)	644
Bme1390I	CCNGG	5 cut(s)	555, 562, 927, 1151, 1278
Bme18I	GGWCC	4 cut(s)	184, 322, 342, 869
BmeRI	GACNNNNNGTC	1 cut(s)	688
BmeT110I	CYCGRG	1 cut(s)	1308
BmgT120I	GGNCC	5 cut(s)	184, 322, 342, 644, 869
BmiI	GGNNCC	5 cut(s)	185, 324, 559, 673, 1282
BmrFI	CCNGG	5 cut(s)	555, 562, 927, 1151, 1278
BmrI	ACTGGG	4 cut(s)	251, 663, 849, 1289
BmsI	GCATC	1 cut(s)	962
BmuI	ACTGGG	4 cut(s)	251, 663, 849, 1289
BpiI	GAAGAC	1 cut(s)	717
BpmI	CTGGAG	2 cut(s)	216, 699
Bpu14I	TTCGAA	1 cut(s)	933
BpuEI	CTTGAG	1 cut(s)	437
BpuMI	CCSGG	2 cut(s)	562, 1151
Bsa29I	ATCGAT	1 cut(s)	284
BsaAI	YACGTR	3 cut(s)	801, 918, 1064
BsaHI	GRCGYC	1 cut(s)	84
BsaI	GGTCTC	1 cut(s)	1266
BsaJI	CCNNGG	7 cut(s)	169, 553, 647, 894, 926, 947, 1276
BsaWI	WCCGGW	1 cut(s)	1045
BsaXI	ACNNNNNCTCC	2 cut(s)	291, 321
Bsc4I	CCNNNNNNNGG	6 cut(s)	234, 339, 560, 592, 653, 895
Bse118I	RCCGGY	1 cut(s)	501
Bse1I	ACTGG	5 cut(s)	9, 257, 658, 844, 1295
BseBI	CCWGG	3 cut(s)	555, 927, 1278
BseCI	ATCGAT	1 cut(s)	284
BseDI	CCNNGG	7 cut(s)	169, 553, 647, 894, 926, 947, 1276
BseGI	GGATG	1 cut(s)	977
BseLI	CCNNNNNNNGG	6 cut(s)	234, 339, 560, 592, 653, 895
BseMII	CTCAG	2 cut(s)	477, 753
BseNI	ACTGG	5 cut(s)	9, 257, 658, 844, 1295
BseSI	GKGCMC	2 cut(s)	660, 1302
BseYI	CCCAGC	1 cut(s)	889
BsgI	GTGCAG	1 cut(s)	1114
Bsh1236I	CGCG	1 cut(s)	728
Bsh1285I	CGRYCG	1 cut(s)	1150
BshFI	GGCC	2 cut(s)	303, 645
BshNI	GGYRCC	1 cut(s)	671
BshVI	ATCGAT	1 cut(s)	284
BsiEI	CGRYCG	1 cut(s)	1150
BsiHKAI	GWGCWC	1 cut(s)	1079
BsiHKCI	CYCGRG	1 cut(s)	1308
BsiSI	CCGG	4 cut(s)	502, 561, 1046, 1150
BslFI	GGGAC	4 cut(s)	87, 197, 1166, 1199
BslI	CCNNNNNNNGG	6 cut(s)	234, 339, 560, 592, 653, 895
BsmAI	GTCTC	5 cut(s)	136, 243, 618, 675, 1266
BsmBI	CGTCTC	1 cut(s)	618
BsmFI	GGGAC	4 cut(s)	87, 197, 1166, 1199
BsnI	GGCC	2 cut(s)	303, 645
Bso31I	GGTCTC	1 cut(s)	1266
BsoBI	CYCGRG	1 cut(s)	1308
Bsp119I	TTCGAA	1 cut(s)	933
Bsp1286I	GDGCHC	3 cut(s)	660, 1079, 1302
Bsp1407I	TGTACA	1 cut(s)	569
Bsp143I	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
BspACI	CCGC	9 cut(s)	345, 505, 637, 642, 669, 675, 867, 986, 1142
BspANI	GGCC	2 cut(s)	303, 645
BspCNI	CTCAG	2 cut(s)	476, 752
BspDI	ATCGAT	1 cut(s)	284
BspFNI	CGCG	1 cut(s)	728
BspLI	GGNNCC	5 cut(s)	185, 324, 559, 673, 1282
BspMAI	CTGCAG	1 cut(s)	603
BspPI	GGATC	4 cut(s)	770, 816, 824, 1169
BspT104I	TTCGAA	1 cut(s)	933
BspT107I	GGYRCC	1 cut(s)	671
BspTNI	GGTCTC	1 cut(s)	1266
BsrBI	CCGCTC	1 cut(s)	669
BsrFI	RCCGGY	1 cut(s)	501
BsrGI	TGTACA	1 cut(s)	569
BsrI	ACTGG	5 cut(s)	9, 257, 658, 844, 1295
BssAI	RCCGGY	1 cut(s)	501
BssECI	CCNNGG	7 cut(s)	169, 553, 647, 894, 926, 947, 1276
BssMI	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
BssNI	GRCGYC	1 cut(s)	84
BssSI	CACGAG	2 cut(s)	1078, 1135
BssT1I	CCWWGG	3 cut(s)	647, 894, 947
Bst2BI	CACGAG	2 cut(s)	1078, 1135
Bst2UI	CCWGG	3 cut(s)	555, 927, 1278
Bst4CI	ACNGT	5 cut(s)	101, 293, 864, 884, 1157
Bst6I	CTCTTC	3 cut(s)	47, 367, 1083
BstACI	GRCGYC	1 cut(s)	84
BstAUI	TGTACA	1 cut(s)	569
BstBAI	YACGTR	3 cut(s)	801, 918, 1064
BstBI	TTCGAA	1 cut(s)	933
BstC8I	GCNNGC	2 cut(s)	71, 913
BstDEI	CTNAG	2 cut(s)	463, 739
BstF5I	GGATG	1 cut(s)	977
BstFNI	CGCG	1 cut(s)	728
BstHHI	GCGC	1 cut(s)	615
BstKTI	GATC	7 cut(s)	288, 747, 756, 765, 811, 819, 1164
BstMAI	GTCTC	5 cut(s)	136, 243, 618, 675, 1266
BstMBI	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
BstMCI	CGRYCG	1 cut(s)	1150
BstMWI	GCNNNNNNNGC	1 cut(s)	502
BstNI	CCWGG	3 cut(s)	555, 927, 1278
BstNSI	RCATGY	2 cut(s)	576, 1002
BstSCI	CCNGG	5 cut(s)	553, 560, 925, 1149, 1276
BstSFI	CTRYAG	1 cut(s)	599
BstSLI	GKGCMC	2 cut(s)	660, 1302
BstUI	CGCG	1 cut(s)	728
BstV2I	GAAGAC	1 cut(s)	717
BstXI	CCANNNNNNTGG	1 cut(s)	194
Bsu15I	ATCGAT	1 cut(s)	284
BsuI	GTATCC	1 cut(s)	388
BsuRI	GGCC	2 cut(s)	303, 645
BsuTUI	ATCGAT	1 cut(s)	284
BtsCI	GGATG	1 cut(s)	977
BtsI	GCAGTG	1 cut(s)	470
BtsIMutI	CAGTG	3 cut(s)	470, 869, 1302
Cac8I	GCNNGC	2 cut(s)	71, 913
CfoI	GCGC	1 cut(s)	615
Cfr10I	RCCGGY	1 cut(s)	501
Cfr13I	GGNCC	5 cut(s)	184, 322, 342, 644, 869
ClaI	ATCGAT	1 cut(s)	284
CseI	GACGC	2 cut(s)	92, 635
Csp6I	GTAC	4 cut(s)	152, 570, 672, 1260
CviAII	CATG	6 cut(s)	314, 573, 999, 1072, 1176, 1198
CviQI	GTAC	4 cut(s)	152, 570, 672, 1260
DdeI	CTNAG	2 cut(s)	463, 739
DpnI	GATC	7 cut(s)	287, 746, 755, 764, 810, 818, 1163
DpnII	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
DrdI	GACNNNNNNGTC	3 cut(s)	128, 257, 867
DriI	GACNNNNNGTC	1 cut(s)	688
DseDI	GACNNNNNNGTC	3 cut(s)	128, 257, 867
Eam1104I	CTCTTC	3 cut(s)	47, 367, 1083
Eam1105I	GACNNNNNGTC	1 cut(s)	688
EarI	CTCTTC	3 cut(s)	47, 367, 1083
Eco130I	CCWWGG	3 cut(s)	647, 894, 947
Eco147I	AGGCCT	1 cut(s)	303
Eco31I	GGTCTC	1 cut(s)	1266
Eco32I	GATATC	1 cut(s)	720
Eco47I	GGWCC	4 cut(s)	184, 322, 342, 869
Eco57I	CTGAAG	1 cut(s)	148
Eco72I	CACGTG	3 cut(s)	801, 918, 1064
Eco88I	CYCGRG	1 cut(s)	1308
EcoO109I	RGGNCCY	1 cut(s)	322
EcoRII	CCWGG	3 cut(s)	553, 925, 1276
EcoRV	GATATC	1 cut(s)	720
EcoT14I	CCWWGG	3 cut(s)	647, 894, 947
EcoT22I	ATGCAT	1 cut(s)	977
ErhI	CCWWGG	3 cut(s)	647, 894, 947
Esp3I	CGTCTC	1 cut(s)	618
FaeI	CATG	6 cut(s)	317, 576, 1002, 1075, 1179, 1201
FaqI	GGGAC	4 cut(s)	87, 197, 1166, 1199
FatI	CATG	6 cut(s)	313, 572, 998, 1071, 1175, 1197
FblI	GTMKAC	2 cut(s)	114, 1055
Fnu4HI	GCNGC	1 cut(s)	643
FokI	GGATG	1 cut(s)	984
Fsp4HI	GCNGC	1 cut(s)	643
FspBI	CTAG	7 cut(s)	60, 95, 135, 155, 948, 1263, 1346
FspI	TGCGCA	1 cut(s)	614
GlaI	GCGC	1 cut(s)	614
GluI	GCNGC	1 cut(s)	643
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	2 cut(s)	216, 699
HaeIII	GGCC	2 cut(s)	303, 645
HapII	CCGG	4 cut(s)	502, 561, 1046, 1150
HgaI	GACGC	2 cut(s)	92, 635
HhaI	GCGC	1 cut(s)	615
Hin1I	GRCGYC	1 cut(s)	84
Hin1II	CATG	6 cut(s)	317, 576, 1002, 1075, 1179, 1201
Hin6I	GCGC	1 cut(s)	613
HinP1I	GCGC	1 cut(s)	613
HincII	GTYRAC	2 cut(s)	115, 703
HindII	GTYRAC	2 cut(s)	115, 703
HindIII	AAGCTT	2 cut(s)	386, 1288
HpaII	CCGG	4 cut(s)	502, 561, 1046, 1150
HphI	GGTGA	4 cut(s)	305, 357, 936, 974
Hpy166II	GTNNAC	5 cut(s)	115, 703, 798, 1056, 1069
Hpy188I	TCNGA	4 cut(s)	110, 173, 466, 742
Hpy188III	TCNNGA	8 cut(s)	28, 218, 766, 780, 1021, 1223, 1308, 1310
Hpy8I	GTNNAC	5 cut(s)	115, 703, 798, 1056, 1069
Hpy99I	CGWCG	3 cut(s)	119, 125, 1325
HpyAV	CCTTC	6 cut(s)	56, 440, 733, 799, 1007, 1018
HpyCH4III	ACNGT	5 cut(s)	101, 293, 864, 884, 1157
HpyCH4IV	ACGT	5 cut(s)	123, 351, 800, 917, 1063
HpyCH4V	TGCA	5 cut(s)	601, 915, 975, 1095, 1125
HpyF10VI	GCNNNNNNNGC	1 cut(s)	502
HpyF3I	CTNAG	2 cut(s)	463, 739
HpySE526I	ACGT	5 cut(s)	123, 351, 800, 917, 1063
Hsp92I	GRCGYC	1 cut(s)	84
Hsp92II	CATG	6 cut(s)	317, 576, 1002, 1075, 1179, 1201
HspAI	GCGC	1 cut(s)	613
KpnI	GGTACC	1 cut(s)	675
Kzo9I	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
LweI	GCATC	1 cut(s)	962
MaeI	CTAG	7 cut(s)	60, 95, 135, 155, 948, 1263, 1346
MaeII	ACGT	5 cut(s)	123, 351, 800, 917, 1063
MaeIII	GTNAC	4 cut(s)	352, 884, 1246, 1324
MalI	GATC	7 cut(s)	287, 746, 755, 764, 810, 818, 1163
MbiI	CCGCTC	1 cut(s)	669
MboI	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
MboII	GAAGA	7 cut(s)	34, 41, 154, 354, 499, 722, 1100
MhlI	GDGCHC	3 cut(s)	660, 1079, 1302
MluCI	AATT	3 cut(s)	175, 373, 821
MlyI	GAGTC	5 cut(s)	120, 731, 964, 1043, 1248
MmeI	TCCRAC	1 cut(s)	495
Mph1103I	ATGCAT	1 cut(s)	977
MslI	CAYNNNNRTG	1 cut(s)	1357
MspA1I	CMGCKG	1 cut(s)	677
MspI	CCGG	4 cut(s)	502, 561, 1046, 1150
MspR9I	CCNGG	5 cut(s)	555, 562, 927, 1151, 1278
MvaI	CCWGG	3 cut(s)	555, 927, 1278
MvnI	CGCG	1 cut(s)	728
MwoI	GCNNNNNNNGC	1 cut(s)	502
NciI	CCSGG	2 cut(s)	562, 1151
NdeII	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
NlaIII	CATG	6 cut(s)	317, 576, 1002, 1075, 1179, 1201
NlaIV	GGNNCC	5 cut(s)	185, 324, 559, 673, 1282
NmuCI	GTSAC	1 cut(s)	884
NsbI	TGCGCA	1 cut(s)	614
NsiI	ATGCAT	1 cut(s)	977
NspI	RCATGY	2 cut(s)	576, 1002
NspV	TTCGAA	1 cut(s)	933
OliI	CACNNNNGTG	1 cut(s)	1357
PaeR7I	CTCGAG	1 cut(s)	1308
PceI	AGGCCT	1 cut(s)	303
PciI	ACATGT	2 cut(s)	572, 998
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PfeI	GAWTC	7 cut(s)	214, 266, 403, 776, 851, 935, 1313
PflMI	CCANNNNNTGG	1 cut(s)	234
PkrI	GCNGC	1 cut(s)	644
PleI	GAGTC	5 cut(s)	119, 731, 963, 1043, 1247
PmaCI	CACGTG	3 cut(s)	801, 918, 1064
PmlI	CACGTG	3 cut(s)	801, 918, 1064
PpsI	GAGTC	5 cut(s)	119, 731, 963, 1043, 1247
Ppu21I	YACGTR	3 cut(s)	801, 918, 1064
PpuMI	RGGWCCY	1 cut(s)	322
PscI	ACATGT	2 cut(s)	572, 998
PsiI	TTATAA	1 cut(s)	903
Psp1406I	AACGTT	1 cut(s)	351
Psp5II	RGGWCCY	1 cut(s)	322
Psp6I	CCWGG	3 cut(s)	553, 925, 1276
PspCI	CACGTG	3 cut(s)	801, 918, 1064
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	3 cut(s)	553, 925, 1276
PspN4I	GGNNCC	5 cut(s)	185, 324, 559, 673, 1282
PspPI	GGNCC	5 cut(s)	184, 322, 342, 644, 869
PspPPI	RGGWCCY	1 cut(s)	322
PstI	CTGCAG	1 cut(s)	603
RsaI	GTAC	4 cut(s)	153, 571, 673, 1261
RsaNI	GTAC	4 cut(s)	152, 570, 672, 1260
RseI	CAYNNNNRTG	1 cut(s)	1357
SalI	GTCGAC	1 cut(s)	113
SatI	GCNGC	1 cut(s)	643
Sau3AI	GATC	7 cut(s)	285, 744, 753, 762, 808, 816, 1161
Sau96I	GGNCC	5 cut(s)	184, 322, 342, 644, 869
SchI	GAGTC	5 cut(s)	120, 731, 964, 1043, 1248
ScrFI	CCNGG	5 cut(s)	555, 562, 927, 1151, 1278
SduI	GDGCHC	3 cut(s)	660, 1079, 1302
SfaNI	GCATC	1 cut(s)	962
SfcI	CTRYAG	1 cut(s)	599
Sfr274I	CTCGAG	1 cut(s)	1308
SfuI	TTCGAA	1 cut(s)	933
SinI	GGWCC	4 cut(s)	184, 322, 342, 869
SlaI	CTCGAG	1 cut(s)	1308
SmiMI	CAYNNNNRTG	1 cut(s)	1357
SmlI	CTYRAG	2 cut(s)	416, 1308
SmoI	CTYRAG	2 cut(s)	416, 1308
Sse9I	AATT	3 cut(s)	175, 373, 821
SseBI	AGGCCT	1 cut(s)	303
SsiI	CCGC	9 cut(s)	345, 505, 637, 642, 669, 675, 867, 986, 1142
SspMI	CTAG	7 cut(s)	60, 95, 135, 155, 948, 1263, 1346
StuI	AGGCCT	1 cut(s)	303
StyD4I	CCNGG	5 cut(s)	553, 560, 925, 1149, 1276
StyI	CCWWGG	3 cut(s)	647, 894, 947
TaaI	ACNGT	5 cut(s)	101, 293, 864, 884, 1157
TaiI	ACGT	5 cut(s)	126, 354, 803, 920, 1066
TaqI	TCGA	8 cut(s)	15, 114, 284, 933, 953, 1237, 1242, 1309
TasI	AATT	3 cut(s)	175, 373, 821
TatI	WGTACW	2 cut(s)	151, 569
TauI	GCSGC	1 cut(s)	645
TfiI	GAWTC	7 cut(s)	214, 266, 403, 776, 851, 935, 1313
TscAI	CASTG	3 cut(s)	477, 869, 1302
TseFI	GTSAC	1 cut(s)	884
Tsp45I	GTSAC	1 cut(s)	884
TspDTI	ATGAA	3 cut(s)	500, 723, 789
TspGWI	ACGGA	2 cut(s)	873, 1309
TspRI	CASTG	3 cut(s)	477, 869, 1302
Van91I	CCANNNNNTGG	1 cut(s)	234
VpaK11BI	GGWCC	4 cut(s)	184, 322, 342, 869
XapI	RAATTY	2 cut(s)	175, 821
XceI	RCATGY	2 cut(s)	576, 1002
XhoI	CTCGAG	1 cut(s)	1308
XmaJI	CCTAGG	1 cut(s)	947
XmiI	GTMKAC	2 cut(s)	114, 1055
XspI	CTAG	7 cut(s)	60, 95, 135, 155, 948, 1263, 1346
Zsp2I	ATGCAT	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.