RchiOBHm_Chr5g0035941

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Reverse (-)
30030786 .. 30034946
4161 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31478

Sequence Viewer

Length: 2496 bp
ATGAGTTCCAATATCGAAGCGTTTATCCAGATATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTTCCCTTGAAGCCCTTACGCCAAACCGTCCCATCAAAGACGGCGACGTTTTAGTCTCTAGCACTCAAATCTTTGCACTAGGGTTCTTCAGCCGCAGAAATCCTCAGCACCGCTATGTTGGAGTTTGGCATAACAAAGTTCCAGGGCAAACCATTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGTCTTGTCATACATGGAAAGGACCGAAGTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCACCCAATTTTACAGCCAAACTTTTGGATACAGGAAATCTTGTTTTAATTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACAGTGCTTCCCTTTATGAAGATTGGGCTGAACCGGCGGTCCGGGTTGGAGCGGCGCCTAACATCTTGGAAATCAAAAGATGACCCGGGAACTGGAAGTTGTACATGTGGGATAGACCCGATGGGGTTTCCGCAATTATTTCTGTGGAAGGGTAGAGAAGCATTGTGGCGGGGCGGCCCTTGGATAGGGGAGAAATGGAGCGGTCGACCTGAAATAACCGATAACGGAGTCTACAATGCAAGTTTTGTCAACAATGAAGATGAGATATACTTCATGTATGATGTTCCTACATTGATCACAAGGGGGGTGCTTGATGAATCAGGAATATTTCAAATGTTCGTGTGGAATGATCGATGGATCAAATTCTACTCCTACCCGACTGAGTGGTGTGATCACTATAGACAGTGTGGTCCAAATACCAACTGTGACCCAGACAAGCAGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTCGTTTGAGTGTTGGTGGGGGTGGGTGCATTAGGAAAGCGGGAGCATCCACATGTCAAAATGGAGAAGGGTTCATGAAGGTAGCGCGTGTAAAAATACCGGACTCATCTATGGCACATATGAGCATGAGTATGAGTTTGAAAGAGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACAGCTTTCACAAACACGAGTGCGGATGAGCAAGGAGGTGGGGTCGGGTGTGTGATATGGCATGGGGACTTGATGGACACGAGGACTTTCTCCAATGCTGGTCAAGATTTATATGTTCGAGTCGACTCAACTTCTTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGCTGTTATAGTTTTTTTTCTCTTGCTTACTCTTTATTGGTTGGTAAGGATGAAGATGAAAGGCAAGCGTAGGCAAAATAAATATTCATTTAAGCTTACTGGCGGATCAACCTACTTCGAAGAAGCTATTGGTGGATTAGCTCTTGATGATAGTAGAATAAACTCAGAGTTACTATTATTTCATCTAAACACACTAGCAACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGTTTTGGCTCTGTTTATAAGGGGATACTTTACGATGGAAAGGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAATTGAAGAGTTTAAGAATGAAATTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTCAAGATTTTAGGTTGCTGTGTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGTGATTATCTTTGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCGAGACTAAGAATTATCCATAGAGACCTAAAAGCTAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGAAGGACTGTTTTCAATTAAGTCTGATGTATATAGTTTTGGAGTTTTATTGCTAGAAATCATTACTGGCAAAAAGAATGCTGGTTCCCATAAGGGGTATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTATGGAAAGAAGGCAGAGTCATGGAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATTATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTGGCAACTGACCGGCCAACCATGTTGGCAGTTGTTTCCATGTTAGGTAATGATGCAGCTCTTCCTTCACCAAGACAACCCGCATTTTTACTGAAGAGAATGAGTCCTAGTAGAGACCCATCAAGCAACAAAGGAGCTAGTTCAGTGAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

831

Amino Acids

92.54

Weight (kDa)

8.43

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 2.5e-33 D-mannose binding lectin
S_locus_glycop PF00954 211 - 314 4.8e-22 S-locus glycoprotein domain
PAN_2 PF08276 334 - 402 7.3e-21 PAN-like domain
PK_Tyr_Ser-Thr PF07714 516 - 785 1.7e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 516 - 724 2.6e-43 Protein kinase domain
DUF3403 PF11883 788 - 831 1.3e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1590, 2276
AasI GACNNNNNNGTC 3 cut(s) 125, 254, 873
AccB1I GGYRCC 1 cut(s) 519
AccB7I CCANNNNNTGG 1 cut(s) 231
AccBSI CCGCTC 2 cut(s) 517, 666
AccI GTMKAC 3 cut(s) 670, 696, 1248
AccII CGCG 1 cut(s) 1033
AclI AACGTT 1 cut(s) 348
AclWI GGATC 3 cut(s) 830, 1333, 1441
AcoI YGGCCR 2 cut(s) 1648, 2327
AcsI RAATTY 3 cut(s) 827, 1677, 2179
AcuI CTGAAG 3 cut(s) 145, 2031, 2426
AcvI CACGTG 1 cut(s) 918
AcyI GRCGYC 1 cut(s) 520
AfaI GTAC 3 cut(s) 328, 568, 2476
AfiI CCNNNNNNNGG 5 cut(s) 231, 336, 557, 650, 2163
AflIII ACRYGT 4 cut(s) 569, 998, 2191, 2471
AjnI CCWGG 2 cut(s) 214, 925
AjuI GAANNNNNNNTTGG 6 cut(s) 1440, 1472, 1545, 1560, 1577, 1592
AleI CACNNNNGTG 1 cut(s) 2299
AloI GAACNNNNNNTCC 2 cut(s) 488, 520
Alw21I GWGCWC 1 cut(s) 1822
Alw26I GTCTC 5 cut(s) 133, 240, 1891, 1911, 2421
AlwI GGATC 3 cut(s) 830, 1333, 1441
Ama87I CYCGRG 1 cut(s) 550
AoxI GGCC 3 cut(s) 640, 1648, 2327
ApeKI GCWGC 1 cut(s) 2369
ApoI RAATTY 3 cut(s) 827, 1677, 2179
Asp700I GAANNNNTTC 1 cut(s) 1680
AspLEI GCGC 2 cut(s) 522, 1033
AspS9I GGNCC 5 cut(s) 319, 339, 504, 641, 875
AsuC2I CCSGG 3 cut(s) 508, 551, 552
AsuHPI GGTGA 6 cut(s) 302, 354, 936, 2046, 2261, 2373
AsuII TTCGAA 2 cut(s) 933, 1446
AsuNHI GCTAGC 1 cut(s) 1928
AvaI CYCGRG 1 cut(s) 550
AvaII GGWCC 4 cut(s) 319, 339, 504, 875
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BalI TGGCCA 1 cut(s) 1650
BanI GGYRCC 1 cut(s) 519
BauI CACGAG 2 cut(s) 1141, 1204
BbrPI CACGTG 1 cut(s) 918
Bbv12I GWGCWC 1 cut(s) 1822
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 1 cut(s) 2381
BccI CCATC 8 cut(s) 113, 287, 580, 813, 1105, 1192, 1601, 2440
BceAI ACGGC 2 cut(s) 130, 1607
BcgI CGANNNNNNTGC 2 cut(s) 2272, 2306
BciT130I CCWGG 2 cut(s) 216, 927
BciVI GTATCC 3 cut(s) 385, 1590, 2178
BclI TGATCA 2 cut(s) 759, 856
BcnI CCSGG 3 cut(s) 508, 551, 552
BcoDI GTCTC 5 cut(s) 133, 240, 1891, 1911, 2421
BfmI CTRYAG 2 cut(s) 862, 2244
BfoI RGCGCY 1 cut(s) 523
BfuI GTATCC 3 cut(s) 385, 1590, 2178
BisI GCNGC 4 cut(s) 166, 518, 640, 2370
BlsI GCNGC 4 cut(s) 167, 519, 641, 2371
Bme1390I CCNGG 5 cut(s) 216, 508, 551, 552, 927
Bme18I GGWCC 4 cut(s) 319, 339, 504, 875
BmeT110I CYCGRG 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 319, 339, 504, 641, 875
BmiI GGNNCC 2 cut(s) 521, 2155
BmrFI CCNGG 5 cut(s) 216, 508, 551, 552, 927
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 2 cut(s) 1001, 2356
BmtI GCTAGC 1 cut(s) 1932
BmuI ACTGGG 1 cut(s) 248
Bpu10I CCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 2 cut(s) 933, 1446
BpuMI CCSGG 3 cut(s) 508, 551, 552
Bsa29I ATCGAT 2 cut(s) 281, 817
BsaAI YACGTR 1 cut(s) 918
BsaBI GATNNNNATC 1 cut(s) 1757
BsaHI GRCGYC 1 cut(s) 520
BsaI GGTCTC 2 cut(s) 1911, 2421
BsaJI CCNNGG 5 cut(s) 215, 550, 644, 926, 1651
BsaWI WCCGGW 1 cut(s) 1045
BsaXI ACNNNNNCTCC 6 cut(s) 288, 318, 1152, 1182, 1529, 1559
Bsc4I CCNNNNNNNGG 5 cut(s) 231, 336, 557, 650, 2163
Bse118I RCCGGY 2 cut(s) 498, 2325
Bse1I ACTGG 4 cut(s) 254, 562, 1432, 2140
Bse3DI GCAATG 2 cut(s) 1939, 2073
Bse8I GATNNNNATC 1 cut(s) 1757
BseBI CCWGG 2 cut(s) 216, 927
BseCI ATCGAT 2 cut(s) 281, 817
BseDI CCNNGG 5 cut(s) 215, 550, 644, 926, 1651
BseGI GGATG 3 cut(s) 992, 1156, 1383
BseJI GATNNNNATC 1 cut(s) 1757
BseLI CCNNNNNNNGG 5 cut(s) 231, 336, 557, 650, 2163
BseMI GCAATG 2 cut(s) 1939, 2073
BseMII CTCAG 4 cut(s) 191, 474, 837, 1506
BseNI ACTGG 4 cut(s) 254, 562, 1432, 2140
BseXI GCAGC 1 cut(s) 2381
Bsh1236I CGCG 1 cut(s) 1033
Bsh1285I CGRYCG 1 cut(s) 670
BshFI GGCC 3 cut(s) 642, 1650, 2329
BshNI GGYRCC 1 cut(s) 519
BshVI ATCGAT 2 cut(s) 281, 817
BsiEI CGRYCG 1 cut(s) 670
BsiHKAI GWGCWC 1 cut(s) 1822
BsiHKCI CYCGRG 1 cut(s) 550
BsiSI CCGG 5 cut(s) 499, 507, 551, 1046, 2326
BslFI GGGAC 2 cut(s) 87, 1205
BslI CCNNNNNNNGG 5 cut(s) 231, 336, 557, 650, 2163
BsmAI GTCTC 5 cut(s) 133, 240, 1891, 1911, 2421
BsmFI GGGAC 2 cut(s) 87, 1205
BsmI GAATGC 2 cut(s) 2152, 2283
BsnI GGCC 3 cut(s) 642, 1650, 2329
Bso31I GGTCTC 2 cut(s) 1911, 2421
BsoBI CYCGRG 1 cut(s) 550
Bsp119I TTCGAA 2 cut(s) 933, 1446
Bsp1286I GDGCHC 1 cut(s) 1822
Bsp1407I TGTACA 2 cut(s) 566, 2474
Bsp143I GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
BspANI GGCC 3 cut(s) 642, 1650, 2329
BspCNI CTCAG 4 cut(s) 190, 473, 838, 1505
BspDI ATCGAT 2 cut(s) 281, 817
BspFNI CGCG 1 cut(s) 1033
BspHI TCATGA 2 cut(s) 1020, 1885
BspLI GGNNCC 2 cut(s) 521, 2155
BspOI GCTAGC 1 cut(s) 1932
BspPI GGATC 3 cut(s) 830, 1333, 1441
BspQI GCTCTTC 1 cut(s) 2379
BspT104I TTCGAA 2 cut(s) 933, 1446
BspT107I GGYRCC 1 cut(s) 519
BspTNI GGTCTC 2 cut(s) 1911, 2421
BsrBI CCGCTC 2 cut(s) 517, 666
BsrDI GCAATG 2 cut(s) 1939, 2073
BsrFI RCCGGY 2 cut(s) 498, 2325
BsrGI TGTACA 2 cut(s) 566, 2474
BsrI ACTGG 4 cut(s) 254, 562, 1432, 2140
BssAI RCCGGY 2 cut(s) 498, 2325
BssECI CCNNGG 5 cut(s) 215, 550, 644, 926, 1651
BssMI GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
BssNI GRCGYC 1 cut(s) 520
BssSI CACGAG 2 cut(s) 1141, 1204
BssT1I CCWWGG 2 cut(s) 644, 1651
Bst2BI CACGAG 2 cut(s) 1141, 1204
Bst2UI CCWGG 2 cut(s) 216, 927
Bst4CI ACNGT 5 cut(s) 101, 469, 870, 890, 2079
Bst6I CTCTTC 6 cut(s) 47, 364, 1656, 1740, 2379, 2402
BstACI GRCGYC 1 cut(s) 520
BstAUI TGTACA 2 cut(s) 566, 2474
BstBAI YACGTR 1 cut(s) 918
BstBI TTCGAA 2 cut(s) 933, 1446
BstC8I GCNNGC 6 cut(s) 71, 913, 1311, 1394, 1930, 2491
BstDEI CTNAG 6 cut(s) 177, 460, 846, 1292, 1492, 1901
BstENI CCTNNNNNAGG 1 cut(s) 648
BstF5I GGATG 3 cut(s) 992, 1156, 1383
BstFNI CGCG 1 cut(s) 1033
BstH2I RGCGCY 1 cut(s) 523
BstHHI GCGC 2 cut(s) 522, 1033
BstKTI GATC 7 cut(s) 285, 762, 817, 825, 859, 1328, 1436
BstMAI GTCTC 5 cut(s) 133, 240, 1891, 1911, 2421
BstMBI GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
BstMCI CGRYCG 1 cut(s) 670
BstMWI GCNNNNNNNGC 3 cut(s) 499, 1271, 1310
BstNI CCWGG 2 cut(s) 216, 927
BstNSI RCATGY 4 cut(s) 573, 1002, 2195, 2475
BstSCI CCNGG 5 cut(s) 214, 506, 549, 550, 925
BstSFI CTRYAG 2 cut(s) 862, 2244
BstUI CGCG 1 cut(s) 1033
BstV1I GCAGC 1 cut(s) 2381
BstX2I RGATCY 1 cut(s) 1325
BstXI CCANNNNNNTGG 2 cut(s) 388, 2029
BstYI RGATCY 1 cut(s) 1325
Bsu15I ATCGAT 2 cut(s) 281, 817
BsuI GTATCC 3 cut(s) 385, 1590, 2178
BsuRI GGCC 3 cut(s) 642, 1650, 2329
BsuTUI ATCGAT 2 cut(s) 281, 817
BtsCI GGATG 3 cut(s) 992, 1156, 1383
BtsIMutI CAGTG 3 cut(s) 474, 875, 2463
Cac8I GCNNGC 6 cut(s) 71, 913, 1311, 1394, 1930, 2491
CciI TCATGA 2 cut(s) 1020, 1885
CfoI GCGC 2 cut(s) 522, 1033
Cfr10I RCCGGY 2 cut(s) 498, 2325
Cfr13I GGNCC 5 cut(s) 319, 339, 504, 641, 875
Cfr9I CCCGGG 1 cut(s) 550
ClaI ATCGAT 2 cut(s) 281, 817
CpoI CGGWCCG 1 cut(s) 504
CseI GACGC 1 cut(s) 1848
Csp6I GTAC 3 cut(s) 327, 567, 2475
CspI CGGWCCG 1 cut(s) 504
CviQI GTAC 3 cut(s) 327, 567, 2475
DdeI CTNAG 6 cut(s) 177, 460, 846, 1292, 1492, 1901
DinI GGCGCC 1 cut(s) 521
DpnI GATC 7 cut(s) 284, 761, 816, 824, 858, 1327, 1435
DpnII GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
DrdI GACNNNNNNGTC 3 cut(s) 125, 254, 873
DseDI GACNNNNNNGTC 3 cut(s) 125, 254, 873
EaeI YGGCCR 2 cut(s) 1648, 2327
Eam1104I CTCTTC 6 cut(s) 47, 364, 1656, 1740, 2379, 2402
EarI CTCTTC 6 cut(s) 47, 364, 1656, 1740, 2379, 2402
EciI GGCGGA 1 cut(s) 1446
Eco130I CCWWGG 2 cut(s) 644, 1651
Eco31I GGTCTC 2 cut(s) 1911, 2421
Eco47I GGWCC 4 cut(s) 319, 339, 504, 875
Eco57I CTGAAG 3 cut(s) 145, 2031, 2426
Eco72I CACGTG 1 cut(s) 918
Eco88I CYCGRG 1 cut(s) 550
EcoNI CCTNNNNNAGG 1 cut(s) 648
EcoRII CCWGG 2 cut(s) 214, 925
EcoT14I CCWWGG 2 cut(s) 644, 1651
EgeI GGCGCC 1 cut(s) 521
EheI GGCGCC 1 cut(s) 521
ErhI CCWWGG 2 cut(s) 644, 1651
FaqI GGGAC 2 cut(s) 87, 1205
FauI CCCGC 3 cut(s) 627, 979, 2401
FauNDI CATATG 2 cut(s) 1065, 2041
FbaI TGATCA 2 cut(s) 759, 856
FblI GTMKAC 3 cut(s) 670, 696, 1248
Fnu4HI GCNGC 4 cut(s) 166, 518, 640, 2370
FokI GGATG 3 cut(s) 979, 1163, 1390
Fsp4HI GCNGC 4 cut(s) 166, 518, 640, 2370
GlaI GCGC 2 cut(s) 521, 1032
GluI GCNGC 4 cut(s) 166, 518, 640, 2370
HaeII RGCGCY 1 cut(s) 523
HaeIII GGCC 3 cut(s) 642, 1650, 2329
HapII CCGG 5 cut(s) 499, 507, 551, 1046, 2326
HgaI GACGC 1 cut(s) 1848
HhaI GCGC 2 cut(s) 522, 1033
Hin1I GRCGYC 1 cut(s) 520
Hin6I GCGC 2 cut(s) 520, 1031
HinP1I GCGC 2 cut(s) 520, 1031
HincII GTYRAC 3 cut(s) 671, 715, 1249
HindII GTYRAC 3 cut(s) 671, 715, 1249
HindIII AAGCTT 2 cut(s) 1421, 1559
HpaII CCGG 5 cut(s) 499, 507, 551, 1046, 2326
HphI GGTGA 6 cut(s) 302, 354, 936, 2046, 2261, 2373
Hpy166II GTNNAC 4 cut(s) 671, 697, 715, 1249
Hpy188I TCNGA 4 cut(s) 463, 1495, 1686, 2095
Hpy188III TCNNGA 9 cut(s) 28, 786, 1021, 1229, 1472, 1717, 1846, 1886, 1896
Hpy8I GTNNAC 4 cut(s) 671, 697, 715, 1249
Hpy99I CGWCG 1 cut(s) 122
HpyCH4III ACNGT 5 cut(s) 101, 469, 870, 890, 2079
HpyCH4IV ACGT 3 cut(s) 120, 348, 917
HpyF10VI GCNNNNNNNGC 3 cut(s) 499, 1271, 1310
HpyF3I CTNAG 6 cut(s) 177, 460, 846, 1292, 1492, 1901
HpySE526I ACGT 3 cut(s) 120, 348, 917
Hsp92I GRCGYC 1 cut(s) 520
HspAI GCGC 2 cut(s) 520, 1031
KasI GGCGCC 1 cut(s) 519
Ksp22I TGATCA 2 cut(s) 759, 856
Kzo9I GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
LguI GCTCTTC 1 cut(s) 2379
LmnI GCTCC 5 cut(s) 514, 663, 989, 2002, 2447
Lsp1109I GCAGC 1 cut(s) 2381
LweI GCATC 2 cut(s) 1001, 2356
MaeII ACGT 3 cut(s) 120, 348, 917
MaeIII GTNAC 5 cut(s) 349, 890, 1497, 2052, 2467
MalI GATC 7 cut(s) 284, 761, 816, 824, 858, 1327, 1435
MbiI CCGCTC 2 cut(s) 517, 666
MboI GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
MfeI CAATTG 1 cut(s) 2478
MflI RGATCY 1 cut(s) 1325
MhlI GDGCHC 1 cut(s) 1822
MlsI TGGCCA 1 cut(s) 1650
MluNI TGGCCA 1 cut(s) 1650
Mly113I GGCGCC 1 cut(s) 520
MlyI GAGTC 7 cut(s) 702, 1043, 1244, 1254, 1784, 2229, 2425
MmeI TCCRAC 5 cut(s) 172, 492, 1723, 1811, 2014
Mox20I TGGCCA 1 cut(s) 1650
MroXI GAANNNNTTC 1 cut(s) 1680
MscI TGGCCA 1 cut(s) 1650
MseI TTAA 6 cut(s) 410, 1419, 1668, 1803, 1826, 2088
MslI CAYNNNNRTG 4 cut(s) 186, 997, 1076, 2299
Msp20I TGGCCA 1 cut(s) 1650
MspI CCGG 5 cut(s) 499, 507, 551, 1046, 2326
MspR9I CCNGG 5 cut(s) 216, 508, 551, 552, 927
MunI CAATTG 1 cut(s) 2478
Mva1269I GAATGC 2 cut(s) 2152, 2283
MvaI CCWGG 2 cut(s) 216, 927
MvnI CGCG 1 cut(s) 1033
MwoI GCNNNNNNNGC 3 cut(s) 499, 1271, 1310
NarI GGCGCC 1 cut(s) 520
NciI CCSGG 3 cut(s) 508, 551, 552
NdeI CATATG 2 cut(s) 1065, 2041
NdeII GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
NheI GCTAGC 1 cut(s) 1928
NlaIV GGNNCC 2 cut(s) 521, 2155
NmuCI GTSAC 3 cut(s) 890, 2052, 2467
NspI RCATGY 4 cut(s) 573, 1002, 2195, 2475
NspV TTCGAA 2 cut(s) 933, 1446
OliI CACNNNNGTG 1 cut(s) 2299
PagI TCATGA 2 cut(s) 1020, 1885
PciI ACATGT 4 cut(s) 569, 998, 2191, 2471
PciSI GCTCTTC 1 cut(s) 2379
PctI GAATGC 2 cut(s) 2152, 2283
PdmI GAANNNNTTC 1 cut(s) 1680
PfeI GAWTC 7 cut(s) 263, 782, 935, 1753, 1892, 2237, 2252
PflMI CCANNNNNTGG 1 cut(s) 231
PkrI GCNGC 4 cut(s) 167, 519, 641, 2371
PleI GAGTC 7 cut(s) 701, 1043, 1244, 1253, 1784, 2228, 2424
PluTI GGCGCC 1 cut(s) 523
PmaCI CACGTG 1 cut(s) 918
PmlI CACGTG 1 cut(s) 918
PpsI GAGTC 7 cut(s) 701, 1043, 1244, 1253, 1784, 2228, 2424
Ppu21I YACGTR 1 cut(s) 918
PscI ACATGT 4 cut(s) 569, 998, 2191, 2471
PsiI TTATAA 2 cut(s) 1590, 2276
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 2 cut(s) 214, 925
PspCI CACGTG 1 cut(s) 918
PspGI CCWGG 2 cut(s) 214, 925
PspN4I GGNNCC 2 cut(s) 521, 2155
PspPI GGNCC 5 cut(s) 319, 339, 504, 641, 875
PsuI RGATCY 1 cut(s) 1325
RsaI GTAC 3 cut(s) 328, 568, 2476
RsaNI GTAC 3 cut(s) 327, 567, 2475
RseI CAYNNNNRTG 4 cut(s) 186, 997, 1076, 2299
Rsr2I CGGWCCG 1 cut(s) 504
RsrII CGGWCCG 1 cut(s) 504
SalI GTCGAC 2 cut(s) 669, 1247
SapI GCTCTTC 1 cut(s) 2379
SaqAI TTAA 6 cut(s) 410, 1419, 1668, 1803, 1826, 2088
SatI GCNGC 4 cut(s) 166, 518, 640, 2370
Sau3AI GATC 7 cut(s) 282, 759, 814, 822, 856, 1325, 1433
Sau96I GGNCC 5 cut(s) 319, 339, 504, 641, 875
SchI GAGTC 7 cut(s) 702, 1043, 1244, 1254, 1784, 2229, 2425
ScrFI CCNGG 5 cut(s) 216, 508, 551, 552, 927
SduI GDGCHC 1 cut(s) 1822
SfaNI GCATC 2 cut(s) 1001, 2356
SfcI CTRYAG 2 cut(s) 862, 2244
SfoI GGCGCC 1 cut(s) 521
SfuI TTCGAA 2 cut(s) 933, 1446
SinI GGWCC 4 cut(s) 319, 339, 504, 875
SmaI CCCGGG 1 cut(s) 552
SmiMI CAYNNNNRTG 4 cut(s) 186, 997, 1076, 2299
SspDI GGCGCC 1 cut(s) 519
SspI AATATT 3 cut(s) 792, 1412, 1992
StyD4I CCNGG 5 cut(s) 214, 506, 549, 550, 925
StyI CCWWGG 2 cut(s) 644, 1651
TaaI ACNGT 5 cut(s) 101, 469, 870, 890, 2079
TaiI ACGT 3 cut(s) 123, 351, 920
TaqI TCGA 9 cut(s) 15, 281, 670, 817, 933, 1243, 1248, 1446, 1895
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 2 cut(s) 566, 2474
TauI GCSGC 3 cut(s) 168, 520, 642
TfiI GAWTC 7 cut(s) 263, 782, 935, 1753, 1892, 2237, 2252
Tru1I TTAA 6 cut(s) 410, 1419, 1668, 1803, 1826, 2088
Tru9I TTAA 6 cut(s) 410, 1419, 1668, 1803, 1826, 2088
TscAI CASTG 3 cut(s) 474, 875, 2463
TseFI GTSAC 3 cut(s) 890, 2052, 2467
TseI GCWGC 1 cut(s) 2369
Tsp45I GTSAC 3 cut(s) 890, 2052, 2467
TspGWI ACGGA 1 cut(s) 705
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 3 cut(s) 474, 875, 2463
Van91I CCANNNNNTGG 1 cut(s) 231
VpaK11BI GGWCC 4 cut(s) 319, 339, 504, 875
XagI CCTNNNNNAGG 1 cut(s) 648
XapI RAATTY 3 cut(s) 827, 1677, 2179
XceI RCATGY 4 cut(s) 573, 1002, 2195, 2475
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 3 cut(s) 670, 696, 1248
XmnI GAANNNNTTC 1 cut(s) 1680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.