RchiOBHm_Chr5g0004881

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
3215780 .. 3218989
3210 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28611

Sequence Viewer

Length: 2454 bp
ATGAATTCTACTAACAAGTGGTTTATCAGTATAATGCTGATCTTGCTTGTTCTTCCCTTATGCACTTCCCTCGATACCATTACTCCAAACGAAGCCATCAAAGATGGCGATATCTTAATCTCCAGCAGGAACACCTTTGCACTTGGTTTTTTCAGTCCAGGCAATTCTCGGTACCGTTACGTTGGAATATGGTATTACCAAATTTCTAACCAAACAGTAGTGTGGGTTGCAAACAGAGACAACCCTGTCCCTGATACCTCTGGAGTGCTATCCATTAATGGAAATGGAGGTCTTGTCATCTATGGAAGTGACCAAAGTTTCCCTCTTTGGTCTGCTAATGTTACTCTCTCTTCTCCAAACAATTCAATTGCAAAGCTTCTGGATACAGGAAATCTTGTCTTGGTTGACAATGGGGATAGGCAAAGGGTGTTGTGGCAAGGCTTTGATTATCCCACAAATATACTGCTTCCATTTATGAAACTTGGGTTGAACCGGCGGTCGGGGCTGAACCGGTTCCTAACATCTTGGAAGTCCAAAGATGACCCAGGAACCGGGAACTGTTCATATGGAGTTCAACCAAGAGGGATGCCTCAGATGTTTGTTTACAAAGACGGAGCTCCACGGTGGCGGTCTGTAATGAGGATCGGCAAGACATGGGGTAGTGTATATACAGTGGTGAACAATGAAGATGAGGTGTCTGTTATGTATACCGCTACCACCAATCAGTCAAATGTAACAAGGACTGTGCTAGATGAATCGGGGGTCCTTTTGCGATCCACATGGAATGATCGAGCACATAAATGGACCGATTATTGGTCTGCCCCACTAGAGCGTTGTGATTTCTATGGACAATGTGGTCCGAATGGTCACTGTGATTCTTACCATGTTAATGCCCCCAGCTGCTTGTGCCTGCCTGGCTTTGAACCCAAGTCCCCAGCTGATTGGTACATGAGCGATGCGTCCAGTGGATGCCTAAAGAAACAAGGAGTATCTTCATGTCAAAAGGGGGAAGGGTTTGTCAAGGTGGAACATGTTAAAGTACCAGAATCGTCTATGGCACATGTAGACATGATGACTATGAGTACAAAAGCGTGTGAGCAAGCATGCTTGAGAAATTGTTCTTGCACTGCATACTCGAGTGCAGATGATAGCGGTGAAGAGACTGGATGTGTGACATGGCACGGGGACTTGATGGACACAAGGACACTTCCAAATGCTGGTCGAGATTTATATATACGAGTTAATGCAACTGTCTTAGCTCAATATGCGAAAATGTCAAATGGTTCTCGTAGCAAGAAGAGAAAGCTGGCAATTTCACTAGCCTCTGTTCTATGTTCATTTATATTAGTTTGCCCTTTGTATTGGTTAGTAAGAAGGATGAGAAAAGGTAAACAAAGACAAAATCAATATTTCTTCAGAGCTACCAGAGGGTCATCCTACTTGGAAAACTCAACTGCAAATATTGATGATGAAAGTAGAAACTCAGATTTACCATTCTTTGATCTAACAATAATAGCATCCGCTACGAATAACTTCTCTGTCGCAAACAAGCTTGGAACAGGTGGCTTTGGATCAGTCTACAAGGGTGTGCTTTATAATGGAAAGGAAATAGCAGTGAAAAGACTATCGAAGAATTCAGGCCAAGGAATTGAAGAGTTCAGGAATGAGGTTGTATTGATTGCGAAACTCCAACATAGGAACCTCGTCAGGATTTTAGGTTGTTGCATTCAAGATGATGAGAAGATGCTAATCTATGAATACGTCCCAAACAAAAGTTTGGACTCTTTCATTTTCAATTGGACAAGACGCTTCGAGATCATTTGTGGAATTGCTAGAGGAATCTTATATCTTCATCAAGATTCGAGATTAAGAATCATCCATAGAGATCTAAAAGCAAGTAATGTTCTTCTAGATGCTTCTATGAACCCCAAAATTGCAGATTTTGGTACGGCTAGAATATTTAGAGGGGACCAAAGTGAAGCAAACACCAATCGTGTTGTTGGAACATATGGCTATATGTCACCTGAGTATGCAATGGAAGGCCATTTTTCATTTAAATCTGATGTATATAGCTTCGGCATTTTACTACTGGAAATTATTACCGGCAAAAAGAATAGTGGTTATTACAATGAGGCTTATCCCGAGTCAAATTTGGTTGGACATGTTTGGAACTTGTGGAGAGAAGGTAATGCCTCGGAAATTGTCGACTCATCTATGTGTGTATCTTACCCTGTCAATGAAGTTTTGAGATGCATCAAGATTGCCCTCTTGTGTGTGCAAAAGTCCGCGACTGACAGACCGACTATGTCAACAGTTGTTTCCATCTTAAGTAATGAAGCAGCTCTTGCTTCGCCAAGAAAACCTCCATTTTTGGTAATGAATAGATCTTATACCAGGACTCAAGGAGCTAATTCTGTGAATGACCTCACATGTACTATTGTAGAGGCTCGCTAA

Protein Analysis

817

Amino Acids

91.27

Weight (kDa)

8.75

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 177 4.3e-34 D-mannose binding lectin
S_locus_glycop PF00954 221 - 311 2.9e-21 S-locus glycoprotein domain
PAN_2 PF08276 333 - 400 2.8e-20 PAN-like domain
Pkinase PF00069 513 - 772 1.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 514 - 775 4.8e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1596
AasI GACNNNNNNGTC 2 cut(s) 245, 855
Acc65I GGTACC 1 cut(s) 171
AccB1I GGYRCC 1 cut(s) 171
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccI GTMKAC 4 cut(s) 707, 1065, 1578, 2205
AccII CGCG 1 cut(s) 2288
AciI CCGC 6 cut(s) 496, 628, 711, 1152, 1521, 2286
AclWI GGATC 3 cut(s) 650, 768, 1579
AcsI RAATTY 4 cut(s) 4, 201, 1633, 2149
AcuI CTGAAG 1 cut(s) 1399
AfaI GTAC 6 cut(s) 173, 947, 1041, 1084, 1948, 2434
AfiI CCNNNNNNNGG 4 cut(s) 499, 551, 813, 1217
AflII CTTAAG 1 cut(s) 2326
AflIII ACRYGT 4 cut(s) 1030, 1060, 2161, 2429
AgeI ACCGGT 1 cut(s) 510
AgsI TTSAA 7 cut(s) 366, 490, 575, 923, 1652, 1730, 1795
AjnI CCWGG 4 cut(s) 157, 544, 913, 2393
Alw21I GWGCWC 2 cut(s) 619, 796
Alw26I GTCTC 2 cut(s) 231, 1154
AlwI GGATC 3 cut(s) 650, 768, 1579
Ama87I CYCGRG 2 cut(s) 1135, 2141
AoxI GGCC 2 cut(s) 1639, 2041
ApeKI GCWGC 2 cut(s) 900, 2339
ApoI RAATTY 4 cut(s) 4, 201, 1633, 2149
AseI ATTAAT 1 cut(s) 276
AsiGI ACCGGT 1 cut(s) 510
Asp700I GAANNNNTTC 3 cut(s) 512, 1117, 1532
Asp718I GGTACC 1 cut(s) 171
AspS9I GGNCC 4 cut(s) 763, 804, 857, 1969
AsuC2I CCSGG 1 cut(s) 553
AsuHPI GGTGA 3 cut(s) 688, 1166, 2013
AvaI CYCGRG 2 cut(s) 1135, 2141
AvaII GGWCC 4 cut(s) 763, 804, 857, 1969
BanI GGYRCC 1 cut(s) 171
BanII GRGCYC 1 cut(s) 619
Bbv12I GWGCWC 2 cut(s) 619, 796
BbvI GCAGC 2 cut(s) 887, 2351
BccI CCATC 4 cut(s) 98, 104, 1186, 2330
BceAI ACGGC 1 cut(s) 1965
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BciT130I CCWGG 4 cut(s) 159, 546, 915, 2395
BciVI GTATCC 1 cut(s) 376
BcnI CCSGG 1 cut(s) 553
BcoDI GTCTC 2 cut(s) 231, 1154
BfaI CTAG 6 cut(s) 749, 827, 1319, 1833, 1910, 1953
BfrI CTTAAG 1 cut(s) 2326
BfuI GTATCC 1 cut(s) 376
BglI GCCNNNNNGGC 1 cut(s) 915
BglII AGATCT 2 cut(s) 1885, 2384
BisI GCNGC 2 cut(s) 901, 2340
BlsI GCNGC 2 cut(s) 902, 2341
Bme1390I CCNGG 5 cut(s) 159, 546, 553, 915, 2395
Bme18I GGWCC 4 cut(s) 763, 804, 857, 1969
BmeT110I CYCGRG 2 cut(s) 1135, 2141
BmgT120I GGNCC 4 cut(s) 763, 804, 857, 1969
BmiI GGNNCC 6 cut(s) 173, 515, 550, 764, 1700, 1970
BmrFI CCNGG 5 cut(s) 159, 546, 553, 915, 2395
BmsI GCATC 8 cut(s) 576, 946, 959, 1526, 1734, 1903, 2240, 2262
BpmI CTGGAG 2 cut(s) 106, 282
BpuEI CTTGAG 2 cut(s) 1129, 2385
BpuMI CCSGG 1 cut(s) 553
BsaBI GATNNNNATC 1 cut(s) 1748
BsaJI CCNNGG 4 cut(s) 544, 620, 1642, 2193
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 6 cut(s) 67, 97, 279, 309, 2170, 2200
Bsc4I CCNNNNNNNGG 4 cut(s) 499, 551, 813, 1217
Bse118I RCCGGY 3 cut(s) 492, 510, 2102
Bse1I ACTGG 3 cut(s) 963, 1168, 2094
Bse3DI GCAATG 1 cut(s) 2040
Bse8I GATNNNNATC 1 cut(s) 1748
BseBI CCWGG 4 cut(s) 159, 546, 915, 2395
BseDI CCNNGG 4 cut(s) 544, 620, 1642, 2193
BseGI GGATG 7 cut(s) 591, 974, 1172, 1383, 1433, 1517, 1875
BseJI GATNNNNATC 1 cut(s) 1748
BseLI CCNNNNNNNGG 4 cut(s) 499, 551, 813, 1217
BseMI GCAATG 1 cut(s) 2040
BseMII CTCAG 3 cut(s) 605, 1497, 2016
BseNI ACTGG 3 cut(s) 963, 1168, 2094
BseXI GCAGC 2 cut(s) 887, 2351
BseYI CCCAGC 2 cut(s) 896, 934
BsgI GTGCAG 1 cut(s) 1161
Bsh1236I CGCG 1 cut(s) 2288
Bsh1285I CGRYCG 1 cut(s) 500
BshFI GGCC 2 cut(s) 1641, 2043
BshNI GGYRCC 1 cut(s) 171
BshTI ACCGGT 1 cut(s) 510
BsiEI CGRYCG 1 cut(s) 500
BsiHKAI GWGCWC 2 cut(s) 619, 796
BsiHKCI CYCGRG 2 cut(s) 1135, 2141
BsiSI CCGG 4 cut(s) 493, 511, 552, 2103
BslFI GGGAC 5 cut(s) 233, 916, 1199, 1748, 1982
BslI CCNNNNNNNGG 4 cut(s) 499, 551, 813, 1217
BsmAI GTCTC 2 cut(s) 231, 1154
BsmFI GGGAC 5 cut(s) 233, 916, 1199, 1748, 1982
BsmI GAATGC 1 cut(s) 1725
BsnI GGCC 2 cut(s) 1641, 2043
BsoBI CYCGRG 2 cut(s) 1135, 2141
Bsp1286I GDGCHC 2 cut(s) 619, 796
Bsp143I GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
BspACI CCGC 6 cut(s) 496, 628, 711, 1152, 1521, 2286
BspANI GGCC 2 cut(s) 1641, 2043
BspCNI CTCAG 3 cut(s) 604, 1496, 2017
BspFNI CGCG 1 cut(s) 2288
BspLI GGNNCC 6 cut(s) 173, 515, 550, 764, 1700, 1970
BspPI GGATC 3 cut(s) 650, 768, 1579
BspT107I GGYRCC 1 cut(s) 171
BspTI CTTAAG 1 cut(s) 2326
BsrDI GCAATG 1 cut(s) 2040
BsrFI RCCGGY 3 cut(s) 492, 510, 2102
BsrI ACTGG 3 cut(s) 963, 1168, 2094
BssAI RCCGGY 3 cut(s) 492, 510, 2102
BssECI CCNNGG 4 cut(s) 544, 620, 1642, 2193
BssMI GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
BssNAI GTATAC 1 cut(s) 708
BssT1I CCWWGG 1 cut(s) 1642
Bst1107I GTATAC 1 cut(s) 708
Bst2UI CCWGG 4 cut(s) 159, 546, 915, 2395
Bst4CI ACNGT 9 cut(s) 176, 217, 560, 624, 673, 745, 872, 1252, 2314
Bst6I CTCTTC 4 cut(s) 355, 1152, 1292, 1647
BstAFI CTTAAG 1 cut(s) 2326
BstAPI GCANNNNNTGC 1 cut(s) 2345
BstC8I GCNNGC 5 cut(s) 911, 1101, 1105, 1308, 2449
BstDEI CTNAG 4 cut(s) 591, 1255, 1483, 2025
BstDSI CCRYGG 1 cut(s) 620
BstF5I GGATG 7 cut(s) 591, 974, 1172, 1383, 1433, 1517, 1875
BstFNI CGCG 1 cut(s) 2288
BstKTI GATC 9 cut(s) 42, 645, 776, 790, 1504, 1574, 1818, 1888, 2387
BstMAI GTCTC 2 cut(s) 231, 1154
BstMBI GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
BstMCI CGRYCG 1 cut(s) 500
BstMWI GCNNNNNNNGC 6 cut(s) 43, 502, 906, 915, 1265, 2345
BstNI CCWGG 4 cut(s) 159, 546, 915, 2395
BstNSI RCATGY 5 cut(s) 1034, 1064, 1107, 2165, 2433
BstSCI CCNGG 5 cut(s) 157, 544, 551, 913, 2393
BstUI CGCG 1 cut(s) 2288
BstV1I GCAGC 2 cut(s) 887, 2351
BstX2I RGATCY 2 cut(s) 1885, 2384
BstXI CCANNNNNNTGG 1 cut(s) 942
BstYI RGATCY 2 cut(s) 1885, 2384
BstZ17I GTATAC 1 cut(s) 708
BsuI GTATCC 1 cut(s) 376
BsuRI GGCC 2 cut(s) 1641, 2043
BtgI CCRYGG 1 cut(s) 620
BtgZI GCGATG 1 cut(s) 969
BtsCI GGATG 7 cut(s) 591, 974, 1172, 1383, 1433, 1517, 1875
BtsI GCAGTG 2 cut(s) 1125, 1620
BtsIMutI CAGTG 5 cut(s) 678, 868, 970, 1125, 1620
Cac8I GCNNGC 5 cut(s) 911, 1101, 1105, 1308, 2449
Cfr10I RCCGGY 3 cut(s) 492, 510, 2102
Cfr13I GGNCC 4 cut(s) 763, 804, 857, 1969
CseI GACGC 2 cut(s) 948, 1815
Csp6I GTAC 6 cut(s) 172, 946, 1040, 1083, 1947, 2433
CspAI ACCGGT 1 cut(s) 510
CviQI GTAC 6 cut(s) 172, 946, 1040, 1083, 1947, 2433
DdeI CTNAG 4 cut(s) 591, 1255, 1483, 2025
DpnI GATC 9 cut(s) 41, 644, 775, 789, 1503, 1573, 1817, 1887, 2386
DpnII GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
DraI TTTAAA 1 cut(s) 2056
DrdI GACNNNNNNGTC 2 cut(s) 245, 855
DseDI GACNNNNNNGTC 2 cut(s) 245, 855
Eam1104I CTCTTC 4 cut(s) 355, 1152, 1292, 1647
EarI CTCTTC 4 cut(s) 355, 1152, 1292, 1647
Ecl136II GAGCTC 1 cut(s) 617
Eco130I CCWWGG 1 cut(s) 1642
Eco24I GRGCYC 1 cut(s) 619
Eco32I GATATC 1 cut(s) 112
Eco47I GGWCC 4 cut(s) 763, 804, 857, 1969
Eco53kI GAGCTC 1 cut(s) 617
Eco57I CTGAAG 1 cut(s) 1399
Eco88I CYCGRG 2 cut(s) 1135, 2141
EcoICRI GAGCTC 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 763
EcoRI GAATTC 2 cut(s) 4, 1633
EcoRII CCWGG 4 cut(s) 157, 544, 913, 2393
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 1642
EcoT22I ATGCAT 1 cut(s) 2255
EcoT38I GRGCYC 1 cut(s) 619
ErhI CCWWGG 1 cut(s) 1642
FalI AAGNNNNNCTT 2 cut(s) 2328, 2360
FaqI GGGAC 5 cut(s) 233, 916, 1199, 1748, 1982
FauNDI CATATG 2 cut(s) 565, 2008
FblI GTMKAC 4 cut(s) 707, 1065, 1578, 2205
Fnu4HI GCNGC 2 cut(s) 901, 2340
FokI GGATG 7 cut(s) 598, 981, 1179, 1390, 1420, 1504, 1862
FriOI GRGCYC 1 cut(s) 619
Fsp4HI GCNGC 2 cut(s) 901, 2340
FspBI CTAG 6 cut(s) 749, 827, 1319, 1833, 1910, 1953
GluI GCNGC 2 cut(s) 901, 2340
GsaI CCCAGC 2 cut(s) 900, 938
GsuI CTGGAG 2 cut(s) 106, 282
HaeIII GGCC 2 cut(s) 1641, 2043
HapII CCGG 4 cut(s) 493, 511, 552, 2103
HgaI GACGC 2 cut(s) 948, 1815
HincII GTYRAC 3 cut(s) 406, 2206, 2310
HindII GTYRAC 3 cut(s) 406, 2206, 2310
HindIII AAGCTT 2 cut(s) 374, 1550
HpaII CCGG 4 cut(s) 493, 511, 552, 2103
HphI GGTGA 3 cut(s) 688, 1166, 2013
Hpy166II GTNNAC 9 cut(s) 406, 604, 679, 708, 1066, 1391, 1579, 2206, 2310
Hpy188I TCNGA 6 cut(s) 594, 861, 1418, 1486, 2062, 2197
Hpy8I GTNNAC 9 cut(s) 406, 604, 679, 708, 1066, 1391, 1579, 2206, 2310
HpyAV CCTTC 4 cut(s) 1004, 1368, 2033, 2177
HpyCH4III ACNGT 9 cut(s) 176, 217, 560, 624, 673, 745, 872, 1252, 2314
HpyCH4IV ACGT 2 cut(s) 180, 1761
HpyF10VI GCNNNNNNNGC 6 cut(s) 43, 502, 906, 915, 1265, 2345
HpyF3I CTNAG 4 cut(s) 591, 1255, 1483, 2025
HpySE526I ACGT 2 cut(s) 180, 1761
KpnI GGTACC 1 cut(s) 175
Kzo9I GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
LmnI GCTCC 3 cut(s) 614, 622, 2405
Lsp1109I GCAGC 2 cut(s) 887, 2351
LweI GCATC 8 cut(s) 576, 946, 959, 1526, 1734, 1903, 2240, 2262
MaeI CTAG 6 cut(s) 749, 827, 1319, 1833, 1910, 1953
MaeII ACGT 2 cut(s) 180, 1761
MaeIII GTNAC 7 cut(s) 176, 308, 340, 733, 866, 1171, 2019
MalI GATC 9 cut(s) 41, 644, 775, 789, 1503, 1573, 1817, 1887, 2386
MboI GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
MfeI CAATTG 2 cut(s) 366, 1795
MflI RGATCY 2 cut(s) 1885, 2384
MhlI GDGCHC 2 cut(s) 619, 796
MlyI GAGTC 4 cut(s) 1775, 2153, 2201, 2392
MmeI TCCRAC 4 cut(s) 163, 1714, 1981, 2137
Mph1103I ATGCAT 1 cut(s) 2255
MroXI GAANNNNTTC 3 cut(s) 512, 1117, 1532
MseI TTAA 8 cut(s) 116, 276, 888, 1035, 1242, 1868, 2055, 2327
MslI CAYNNNNRTG 3 cut(s) 799, 888, 2215
MspA1I CMGCKG 2 cut(s) 900, 938
MspCI CTTAAG 1 cut(s) 2326
MspI CCGG 4 cut(s) 493, 511, 552, 2103
MspR9I CCNGG 5 cut(s) 159, 546, 553, 915, 2395
MunI CAATTG 2 cut(s) 366, 1795
Mva1269I GAATGC 1 cut(s) 1725
MvaI CCWGG 4 cut(s) 159, 546, 915, 2395
MvnI CGCG 1 cut(s) 2288
MwoI GCNNNNNNNGC 6 cut(s) 43, 502, 906, 915, 1265, 2345
NciI CCSGG 1 cut(s) 553
NdeI CATATG 2 cut(s) 565, 2008
NdeII GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
NlaIV GGNNCC 6 cut(s) 173, 515, 550, 764, 1700, 1970
NmuCI GTSAC 4 cut(s) 308, 866, 1171, 2019
NsiI ATGCAT 1 cut(s) 2255
NspI RCATGY 5 cut(s) 1034, 1064, 1107, 2165, 2433
PaeI GCATGC 1 cut(s) 1107
PaeR7I CTCGAG 1 cut(s) 1135
PciI ACATGT 4 cut(s) 1030, 1060, 2161, 2429
PctI GAATGC 1 cut(s) 1725
PdmI GAANNNNTTC 3 cut(s) 512, 1117, 1532
PfeI GAWTC 6 cut(s) 755, 875, 1046, 1839, 1859, 1872
PflFI GACNNNGTC 1 cut(s) 2305
PflMI CCANNNNNTGG 1 cut(s) 1217
PinAI ACCGGT 1 cut(s) 510
PkrI GCNGC 2 cut(s) 902, 2341
PleI GAGTC 4 cut(s) 1775, 2152, 2201, 2392
PpsI GAGTC 4 cut(s) 1775, 2152, 2201, 2392
PpuMI RGGWCCY 1 cut(s) 763
PscI ACATGT 4 cut(s) 1030, 1060, 2161, 2429
PshBI ATTAAT 1 cut(s) 276
PsiI TTATAA 1 cut(s) 1596
Psp124BI GAGCTC 1 cut(s) 619
Psp5II RGGWCCY 1 cut(s) 763
Psp6I CCWGG 4 cut(s) 157, 544, 913, 2393
PspFI CCCAGC 2 cut(s) 896, 934
PspGI CCWGG 4 cut(s) 157, 544, 913, 2393
PspN4I GGNNCC 6 cut(s) 173, 515, 550, 764, 1700, 1970
PspPI GGNCC 4 cut(s) 763, 804, 857, 1969
PspPPI RGGWCCY 1 cut(s) 763
PspXI VCTCGAGB 1 cut(s) 1135
PsuI RGATCY 2 cut(s) 1885, 2384
PsyI GACNNNGTC 1 cut(s) 2305
PvuII CAGCTG 2 cut(s) 900, 938
RsaI GTAC 6 cut(s) 173, 947, 1041, 1084, 1948, 2434
RsaNI GTAC 6 cut(s) 172, 946, 1040, 1083, 1947, 2433
RseI CAYNNNNRTG 3 cut(s) 799, 888, 2215
SacI GAGCTC 1 cut(s) 619
SalI GTCGAC 1 cut(s) 2204
SaqAI TTAA 8 cut(s) 116, 276, 888, 1035, 1242, 1868, 2055, 2327
SatI GCNGC 2 cut(s) 901, 2340
Sau3AI GATC 9 cut(s) 39, 642, 773, 787, 1501, 1571, 1815, 1885, 2384
Sau96I GGNCC 4 cut(s) 763, 804, 857, 1969
SchI GAGTC 4 cut(s) 1775, 2153, 2201, 2392
ScrFI CCNGG 5 cut(s) 159, 546, 553, 915, 2395
SduI GDGCHC 2 cut(s) 619, 796
SfaNI GCATC 8 cut(s) 576, 946, 959, 1526, 1734, 1903, 2240, 2262
Sfr274I CTCGAG 1 cut(s) 1135
SinI GGWCC 4 cut(s) 763, 804, 857, 1969
SlaI CTCGAG 1 cut(s) 1135
SmiI ATTTAAAT 1 cut(s) 2056
SmiMI CAYNNNNRTG 3 cut(s) 799, 888, 2215
SmlI CTYRAG 4 cut(s) 1108, 1135, 2326, 2400
SmoI CTYRAG 4 cut(s) 1108, 1135, 2326, 2400
SphI GCATGC 1 cut(s) 1107
SsiI CCGC 6 cut(s) 496, 628, 711, 1152, 1521, 2286
SspI AATATT 3 cut(s) 1409, 1462, 1959
SspMI CTAG 6 cut(s) 749, 827, 1319, 1833, 1910, 1953
SstI GAGCTC 1 cut(s) 619
StyD4I CCNGG 5 cut(s) 157, 544, 551, 913, 2393
StyI CCWWGG 1 cut(s) 1642
SwaI ATTTAAAT 1 cut(s) 2056
TaaI ACNGT 9 cut(s) 176, 217, 560, 624, 673, 745, 872, 1252, 2314
TaiI ACGT 2 cut(s) 183, 1764
TaqI TCGA 8 cut(s) 72, 790, 1136, 1222, 1628, 1812, 1862, 2205
TaqII GACCGA 2 cut(s) 821, 2314
TatI WGTACW 2 cut(s) 1082, 2432
TfiI GAWTC 6 cut(s) 755, 875, 1046, 1839, 1859, 1872
Tru1I TTAA 8 cut(s) 116, 276, 888, 1035, 1242, 1868, 2055, 2327
Tru9I TTAA 8 cut(s) 116, 276, 888, 1035, 1242, 1868, 2055, 2327
TscAI CASTG 5 cut(s) 678, 875, 970, 1132, 1620
TseFI GTSAC 4 cut(s) 308, 866, 1171, 2019
TseI GCWGC 2 cut(s) 900, 2339
Tsp45I GTSAC 4 cut(s) 308, 866, 1171, 2019
TspGWI ACGGA 1 cut(s) 627
TspRI CASTG 5 cut(s) 678, 875, 970, 1132, 1620
Tth111I GACNNNGTC 1 cut(s) 2305
Van91I CCANNNNNTGG 1 cut(s) 1217
Vha464I CTTAAG 1 cut(s) 2326
VpaK11BI GGWCC 4 cut(s) 763, 804, 857, 1969
VspI ATTAAT 1 cut(s) 276
XapI RAATTY 4 cut(s) 4, 201, 1633, 2149
XbaI TCTAGA 1 cut(s) 1909
XceI RCATGY 5 cut(s) 1034, 1064, 1107, 2165, 2433
XhoI CTCGAG 1 cut(s) 1135
XmiI GTMKAC 4 cut(s) 707, 1065, 1578, 2205
XmnI GAANNNNTTC 3 cut(s) 512, 1117, 1532
XspI CTAG 6 cut(s) 749, 827, 1319, 1833, 1910, 1953
Zsp2I ATGCAT 1 cut(s) 2255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.