pycom10g26020

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
27463166 .. 27463432
267 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26020.1

Sequence Viewer

Length: 267 bp
ATGAAACTTGGGTTGAACCGGCGGTCCGGAAAGTTTCGGTTCCTGACACCTTGGAAATCTGAAGATGACCCGGGAATTGGGAGTTGTTCATATCGGATTGACCCAGGCGGTTTTCCTCAAATGTTTTACAAGGGCCAAACTCCGTGGTGGCGAGCTGGAACTTGGACCAGTGAGAGATGTGCCGGTTTGCACCAAATGACAATTGATTTCATCTTCAATGCTAGTTTTGTGAACAACGAAGATGAGTTATCCGATGTGTTTGGCTGA

Protein Analysis

89

Amino Acids

10.1

Weight (kDa)

6.54

Isoelectric Point (pI)

31.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 26
AciI CCGC 2 cut(s) 22, 108
AcuI CTGAAG 1 cut(s) 81
AfiI CCNNNNNNNGG 1 cut(s) 77
AgsI TTSAA 2 cut(s) 16, 217
AjnI CCWGG 1 cut(s) 103
AloI GAACNNNNNNTCC 2 cut(s) 8, 40
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Ama87I CYCGRG 1 cut(s) 70
Aor13HI TCCGGA 1 cut(s) 26
AoxI GGCC 1 cut(s) 133
AspS9I GGNCC 3 cut(s) 24, 133, 165
AsuC2I CCSGG 2 cut(s) 71, 72
AvaI CYCGRG 1 cut(s) 70
AvaII GGWCC 2 cut(s) 24, 165
BciT130I CCWGG 1 cut(s) 105
BcnI CCSGG 2 cut(s) 71, 72
BfaI CTAG 1 cut(s) 222
Bme1390I CCNGG 3 cut(s) 71, 72, 105
Bme18I GGWCC 2 cut(s) 24, 165
BmeT110I CYCGRG 1 cut(s) 70
BmgT120I GGNCC 3 cut(s) 24, 133, 165
BmiI GGNNCC 1 cut(s) 41
BmrFI CCNGG 3 cut(s) 71, 72, 105
BpuMI CCSGG 2 cut(s) 71, 72
BsaJI CCNNGG 4 cut(s) 50, 70, 103, 143
BsaWI WCCGGW 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 77
Bse118I RCCGGY 2 cut(s) 18, 182
Bse1I ACTGG 1 cut(s) 168
BseAI TCCGGA 1 cut(s) 26
BseBI CCWGG 1 cut(s) 105
BseDI CCNNGG 4 cut(s) 50, 70, 103, 143
BseLI CCNNNNNNNGG 1 cut(s) 77
BseNI ACTGG 1 cut(s) 168
BshFI GGCC 1 cut(s) 135
BsiHKCI CYCGRG 1 cut(s) 70
BsiSI CCGG 4 cut(s) 19, 27, 71, 183
BslI CCNNNNNNNGG 1 cut(s) 77
BsnI GGCC 1 cut(s) 135
BsoBI CYCGRG 1 cut(s) 70
Bsp13I TCCGGA 1 cut(s) 26
BspACI CCGC 2 cut(s) 22, 108
BspANI GGCC 1 cut(s) 135
BspEI TCCGGA 1 cut(s) 26
BspLI GGNNCC 1 cut(s) 41
BsrFI RCCGGY 2 cut(s) 18, 182
BsrI ACTGG 1 cut(s) 168
BssAI RCCGGY 2 cut(s) 18, 182
BssECI CCNNGG 4 cut(s) 50, 70, 103, 143
BssT1I CCWWGG 1 cut(s) 50
Bst2UI CCWGG 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 153
BstDSI CCRYGG 1 cut(s) 143
BstNI CCWGG 1 cut(s) 105
BstSCI CCNGG 3 cut(s) 69, 70, 103
BsuRI GGCC 1 cut(s) 135
BtgI CCRYGG 1 cut(s) 143
BtsIMutI CAGTG 1 cut(s) 175
Cac8I GCNNGC 1 cut(s) 153
Cfr10I RCCGGY 2 cut(s) 18, 182
Cfr13I GGNCC 3 cut(s) 24, 133, 165
Cfr9I CCCGGG 1 cut(s) 70
CpoI CGGWCCG 1 cut(s) 24
CspCI CAANNNNNGTGG 2 cut(s) 125, 160
CspI CGGWCCG 1 cut(s) 24
CviJI RGCY 3 cut(s) 135, 155, 264
CviKI_1 RGCY 3 cut(s) 135, 155, 264
Eco130I CCWWGG 1 cut(s) 50
Eco47I GGWCC 2 cut(s) 24, 165
Eco57I CTGAAG 1 cut(s) 81
Eco88I CYCGRG 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 50
ErhI CCWWGG 1 cut(s) 50
FaiI YATR 1 cut(s) 91
FspBI CTAG 1 cut(s) 222
HaeIII GGCC 1 cut(s) 135
HapII CCGG 4 cut(s) 19, 27, 71, 183
HpaII CCGG 4 cut(s) 19, 27, 71, 183
Hpy166II GTNNAC 1 cut(s) 232
Hpy188I TCNGA 3 cut(s) 61, 96, 253
Hpy188III TCNNGA 2 cut(s) 27, 43
Hpy8I GTNNAC 1 cut(s) 232
HpyCH4V TGCA 1 cut(s) 190
Kpn2I TCCGGA 1 cut(s) 26
LpnPI CCDG 9 cut(s) 32, 40, 56, 84, 90, 117, 141, 181, 196
MaeI CTAG 1 cut(s) 222
MboII GAAGA 3 cut(s) 74, 205, 251
MfeI CAATTG 1 cut(s) 201
MluCI AATT 2 cut(s) 75, 201
MnlI CCTC 1 cut(s) 126
MroI TCCGGA 1 cut(s) 26
MspI CCGG 4 cut(s) 19, 27, 71, 183
MspR9I CCNGG 3 cut(s) 71, 72, 105
MunI CAATTG 1 cut(s) 201
MvaI CCWGG 1 cut(s) 105
NciI CCSGG 2 cut(s) 71, 72
NlaIV GGNNCC 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 103
PspGI CCWGG 1 cut(s) 103
PspN4I GGNNCC 1 cut(s) 41
PspPI GGNCC 3 cut(s) 24, 133, 165
Rsr2I CGGWCCG 1 cut(s) 24
RsrII CGGWCCG 1 cut(s) 24
Sau96I GGNCC 3 cut(s) 24, 133, 165
ScrFI CCNGG 3 cut(s) 71, 72, 105
SetI ASST 2 cut(s) 52, 157
SinI GGWCC 2 cut(s) 24, 165
SmaI CCCGGG 1 cut(s) 72
Sse9I AATT 2 cut(s) 75, 201
SsiI CCGC 2 cut(s) 22, 108
SspMI CTAG 1 cut(s) 222
StyD4I CCNGG 3 cut(s) 69, 70, 103
StyI CCWWGG 1 cut(s) 50
TasI AATT 2 cut(s) 75, 201
TscAI CASTG 1 cut(s) 175
TspDTI ATGAA 3 cut(s) 17, 78, 199
TspGWI ACGGA 1 cut(s) 132
TspMI CCCGGG 1 cut(s) 70
TspRI CASTG 1 cut(s) 175
VpaK11BI GGWCC 2 cut(s) 24, 165
XmaI CCCGGG 1 cut(s) 70
XspI CTAG 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.