FvH4_3g03300

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000099
Physical Location & Seq
Reverse (-)
1771083 .. 1774428
3346 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03300.t1

Sequence Viewer

Length: 2187 bp
ATGACCATCACTTTTAACCAATTCATCAAAGATGGTGACTTTCTCATCTCTAAAAACGAGGCATTTGTGCTCGGATTCTTTAGTCCAGGCACATCAAGCAACCGCTATGTCGGTATTTGGTACAGGTTCTCACAAAACAAAGTTCTTTGGGTAGCTAACAGAGACCATCCTGTTAATGATACCTCAGGAATCCTCACAATTAGCACTGAAGGAAATCTCATATTACATTATAATACCAGTCAAAGCCTTCCTCTGTGGTCAACAAATGTTTCTGTCATACCAATGAGTAGCAATAGTACTATGGTGCAGCTCCAGGATTCAGGTAATCTTGTTTTGGTTAATCAGCAAGTCCACAACCAGAGTGGTGTCTTATGGCAGAGCTCTGATCATCCTACACATATTCTTCTTGCGAACATGAAAATTGGGTTCCAACAAGGTAAGAACATATTTATTACATCCTGGAAATCAAAAAATGACCCAGGAACTGGTAATTGCTCGATAAAGACAGAACCAAGCGGGTCTCCTCAGATAATCTTGTACAAAAATCGGGCCAAGTGGCGGCGGTCTGGTCACTGGGATGGGCTTCACTGGAATGGATTCCCTAATGTAAACAGGCTAAGCAAGAATATTTCGTTTGATATTGTATTAGTGAACAACAAAGATGAGATTACTACAAAATTTGTTGTTCTTGAACCTTCAGTTATCTCAATAATAGAAATTGACGGATCCGGATCACTCCAATTGCTAGCATGGAAGGGACAGCAACAAGGATGGGTCACACTTTGGTCACCAACGGATGTATGTGACAGATATGAACCCAACTCCCCAGAAGAATGGAGATTAAGAGAAGGATCAGGTGGGTGCAAGAGGCTGCAGGGCGCTCCATCCATGTGTAGGAACGGAGAGAGGTTTGTAAAAATACAAAACGTGAAGGTTCCAGATTCTTCCACAATCAATTTGGACATCAATTTGACTATGGAAGCATGTGAGCAGAAGTGTTTGAATAACTGCTCGTGCTTGGCGTATGCCAGTGCAGATGTGAGAAATGGGGGAAGCGGATGCATGACATGGTATGGAGATTTAATGGATACTACTCAGTTTGCTCAAGGACAAGGACAAGATCTCTACATTCGTGCTGATGCAATAGTGTCAGGCTCTCTAATGAAGCAATATGGAAGTATAGCTCACAAAGACCTGGAATATTTTAACCTAAAGAGCATACTTGCTGCCACTGACAATTTCTCCATTGCTAACAAGCTAGGTGAAGGAGGATTTGGCCCAGTGTATAAGGGCCTACTAGCTAATGGAGAGGAGATTGCTGTGAAAAGATTATCAAAGAACTCCGGACAAGGTTTAGAACAGTTTAAAACTGAGGTAAAGCTGATAGCAAAACTTCAGCACAGGAACCTGGTCAGGCTTCTTGGTTGTTGCTTCAATTCAGAAGAAAAGATGTTGATTTATGAATACTTGCCAAACAAGAGCTTAGACTTTTTCATATTTGATAGAAGTAGAAGCTTGTCAATAGACTGGAAAAAACGTTTTGACATTATAAATGGAATTGCTCGTGGGGTCCTATATCTCCATCAAGACTCGAGATTGAAGATTGTCCACAGGGACATCAAAGCCAGCAATGTCTTATTAGATTCCACAATGAACCCAAAGATCTCAGATTTTGGACTCGCTAAAATGATTGGGGAAGACCAACTCCAAGCAAATACAAACAGAGTTATTGGAACGTATGGCTACATGTCACCTGAATATGCAATGGAAGGGCGATGTTCAACCAAATCTGATGTTTTTAGCTTTGGTATCTTATTGCTAGAAATCATCAGTGGCAAGAGGAACACTGACTACAATCTTAACAGCCCCTCCCTCAATTTAATTGGAGAAATTTGGGATATGTGGAGAGAGGGACAAGCATTGGGAATAGTTGATCCATCTTTGAGTTTGTATCCTGCTCATGAGGTTTCAAGATGCATCCACATTGGGCTACTATTCGTGCAAGAGTCTACAACAGATCGGCCAACAATGTCGGAAGTAGTTTACATGCTGGGCAAAGAAGCACCTCTCACTTCTCCTAAGAAACCTGCATTCATATTACAATCCAGCAATCCAAACTCAGAAGAAGCATCAATAAGAGGACCTTCAATAAATAATGTAACAAAAACCATGCTTGAAGCCCGCTAA

Protein Analysis

729

Amino Acids

81.37

Weight (kDa)

8.09

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 48 - 155 2.5e-27 D-mannose binding lectin
S_locus_glycop PF00954 188 - 272 9.2e-10 S-locus glycoprotein domain
PAN_2 PF08276 298 - 364 3.3e-21 PAN-like domain
Pkinase PF00069 415 - 615 1.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 416 - 615 6.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 231, 1550
Acc36I ACCTGC 1 cut(s) 2095
AccB7I CCANNNNNTGG 1 cut(s) 485
AccI GTMKAC 1 cut(s) 2009
AccIII TCCGGA 2 cut(s) 728, 1343
AciI CCGC 6 cut(s) 103, 516, 559, 562, 1056, 2182
AclI AACGTT 1 cut(s) 1537
AclWI GGATC 5 cut(s) 720, 733, 739, 859, 1928
AcoI YGGCCR 1 cut(s) 2021
AcsI RAATTY 2 cut(s) 677, 1890
AcuI CTGAAG 3 cut(s) 228, 681, 1379
AfaI GTAC 3 cut(s) 122, 298, 539
AfiI CCNNNNNNNGG 3 cut(s) 485, 558, 894
AflIII ACRYGT 1 cut(s) 1746
AgsI TTSAA 8 cut(s) 692, 1003, 1435, 1600, 1782, 1971, 2148, 2177
AjnI CCWGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
AjuI GAANNNNNNNTTGG 2 cut(s) 1257, 1289
Alw21I GWGCWC 2 cut(s) 72, 383
Alw26I GTCTC 2 cut(s) 156, 525
AlwI GGATC 5 cut(s) 720, 733, 739, 859, 1928
AlwNI CAGNNNCTG 1 cut(s) 485
Ama87I CYCGRG 1 cut(s) 1591
Aor13HI TCCGGA 2 cut(s) 728, 1343
AoxI GGCC 4 cut(s) 549, 1276, 1291, 2021
ApeKI GCWGC 3 cut(s) 307, 871, 1226
ApoI RAATTY 2 cut(s) 677, 1890
Asp700I GAANNNNTTC 1 cut(s) 596
AspLEI GCGC 1 cut(s) 881
AspS9I GGNCC 5 cut(s) 549, 1277, 1291, 1570, 2141
AsuHPI GGTGA 4 cut(s) 47, 780, 1274, 1743
AsuNHI GCTAGC 1 cut(s) 745
AvaI CYCGRG 1 cut(s) 1591
AvaII GGWCC 2 cut(s) 1570, 2141
AxyI CCTNAGG 1 cut(s) 184
BamHI GGATCC 1 cut(s) 725
BanII GRGCYC 1 cut(s) 383
BauI CACGAG 2 cut(s) 1012, 1563
BbsI GAAGAC 1 cut(s) 1704
Bbv12I GWGCWC 2 cut(s) 72, 383
BbvI GCAGC 3 cut(s) 319, 858, 1213
BccI CCATC 8 cut(s) 14, 26, 174, 572, 765, 892, 1590, 1945
BciT130I CCWGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
BciVI GTATCC 2 cut(s) 1081, 1962
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 2 cut(s) 156, 525
BfaI CTAG 4 cut(s) 746, 1259, 1298, 1820
BfmI CTRYAG 1 cut(s) 872
BfoI RGCGCY 1 cut(s) 882
BfuAI ACCTGC 1 cut(s) 2095
BfuI GTATCC 2 cut(s) 1081, 1962
BglII AGATCT 2 cut(s) 1120, 1662
BisI GCNGC 4 cut(s) 308, 560, 872, 1227
BlpI GCTNAGC 1 cut(s) 617
BlsI GCNGC 4 cut(s) 309, 561, 873, 1228
BmcAI AGTACT 1 cut(s) 298
Bme1390I CCNGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
Bme18I GGWCC 2 cut(s) 1570, 2141
BmeT110I CYCGRG 1 cut(s) 1591
BmgT120I GGNCC 5 cut(s) 549, 1277, 1291, 1570, 2141
BmiI GGNNCC 5 cut(s) 428, 727, 936, 1406, 1571
BmrFI CCNGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
BmrI ACTGGG 2 cut(s) 583, 1274
BmsI GCATC 5 cut(s) 1049, 1129, 1964, 1986, 2138
BmtI GCTAGC 1 cut(s) 749
BmuI ACTGGG 2 cut(s) 583, 1274
BpiI GAAGAC 1 cut(s) 1704
BpmI CTGGAG 1 cut(s) 296
Bpu1102I GCTNAGC 1 cut(s) 617
BpuEI CTTGAG 1 cut(s) 1089
BsaBI GATNNNNATC 1 cut(s) 730
BsaI GGTCTC 2 cut(s) 156, 525
BsaJI CCNNGG 1 cut(s) 478
BsaWI WCCGGW 2 cut(s) 728, 1343
BsaXI ACNNNNNCTCC 4 cut(s) 1226, 1256, 1853, 1883
Bsc4I CCNNNNNNNGG 3 cut(s) 485, 558, 894
Bse1I ACTGG 7 cut(s) 237, 490, 578, 593, 1029, 1280, 1532
Bse21I CCTNAGG 1 cut(s) 184
Bse3DI GCAATG 3 cut(s) 1245, 1636, 1770
Bse8I GATNNNNATC 1 cut(s) 730
BseAI TCCGGA 2 cut(s) 728, 1343
BseBI CCWGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
BseDI CCNNGG 1 cut(s) 478
BseGI GGATG 9 cut(s) 166, 388, 455, 583, 776, 802, 884, 1064, 1977
BseJI GATNNNNATC 1 cut(s) 730
BseLI CCNNNNNNNGG 3 cut(s) 485, 558, 894
BseMI GCAATG 3 cut(s) 1245, 1636, 1770
BseMII CTCAG 6 cut(s) 198, 539, 1109, 1362, 1680, 2133
BseNI ACTGG 7 cut(s) 237, 490, 578, 593, 1029, 1280, 1532
BseRI GAGGAG 2 cut(s) 513, 1325
BseXI GCAGC 3 cut(s) 319, 858, 1213
BseYI CCCAGC 1 cut(s) 2050
BsgI GTGCAG 2 cut(s) 326, 1053
BshFI GGCC 4 cut(s) 551, 1278, 1293, 2023
BsiHKAI GWGCWC 2 cut(s) 72, 383
BsiHKCI CYCGRG 1 cut(s) 1591
BsiSI CCGG 2 cut(s) 729, 1344
BslFI GGGAC 3 cut(s) 771, 1628, 1926
BslI CCNNNNNNNGG 3 cut(s) 485, 558, 894
BsmAI GTCTC 2 cut(s) 156, 525
BsmFI GGGAC 3 cut(s) 771, 1628, 1926
BsmI GAATGC 1 cut(s) 2090
BsnI GGCC 4 cut(s) 551, 1278, 1293, 2023
Bso31I GGTCTC 2 cut(s) 156, 525
BsoBI CYCGRG 1 cut(s) 1591
Bsp1286I GDGCHC 2 cut(s) 72, 383
Bsp13I TCCGGA 2 cut(s) 728, 1343
Bsp1407I TGTACA 1 cut(s) 537
Bsp143I GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
Bsp1720I GCTNAGC 1 cut(s) 617
BspACI CCGC 6 cut(s) 103, 516, 559, 562, 1056, 2182
BspANI GGCC 4 cut(s) 551, 1278, 1293, 2023
BspCNI CTCAG 6 cut(s) 197, 538, 1108, 1363, 1679, 2132
BspEI TCCGGA 2 cut(s) 728, 1343
BspHI TCATGA 1 cut(s) 1960
BspLI GGNNCC 5 cut(s) 428, 727, 936, 1406, 1571
BspMAI CTGCAG 1 cut(s) 876
BspMI ACCTGC 1 cut(s) 2095
BspOI GCTAGC 1 cut(s) 749
BspPI GGATC 5 cut(s) 720, 733, 739, 859, 1928
BspTNI GGTCTC 2 cut(s) 156, 525
BsrDI GCAATG 3 cut(s) 1245, 1636, 1770
BsrGI TGTACA 1 cut(s) 537
BsrI ACTGG 7 cut(s) 237, 490, 578, 593, 1029, 1280, 1532
BssECI CCNNGG 1 cut(s) 478
BssMI GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
BssSI CACGAG 2 cut(s) 1012, 1563
Bst2BI CACGAG 2 cut(s) 1012, 1563
Bst2UI CCWGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
Bst4CI ACNGT 1 cut(s) 1362
BstAUI TGTACA 1 cut(s) 537
BstC8I GCNNGC 3 cut(s) 747, 1627, 2182
BstDEI CTNAG 9 cut(s) 184, 525, 617, 1095, 1371, 1483, 1666, 2079, 2119
BstEII GGTNACC 1 cut(s) 786
BstF5I GGATG 9 cut(s) 166, 388, 455, 583, 776, 802, 884, 1064, 1977
BstH2I RGCGCY 1 cut(s) 882
BstHHI GCGC 1 cut(s) 881
BstKTI GATC 8 cut(s) 388, 728, 734, 854, 1123, 1665, 1936, 2020
BstMAI GTCTC 2 cut(s) 156, 525
BstMBI GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
BstMWI GCNNNNNNNGC 1 cut(s) 96
BstNI CCWGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
BstNSI RCATGY 3 cut(s) 987, 1750, 2050
BstPI GGTNACC 1 cut(s) 786
BstSCI CCNGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
BstSFI CTRYAG 1 cut(s) 872
BstV1I GCAGC 3 cut(s) 319, 858, 1213
BstV2I GAAGAC 1 cut(s) 1704
BstX2I RGATCY 3 cut(s) 725, 1120, 1662
BstXI CCANNNNNNTGG 1 cut(s) 834
BstYI RGATCY 3 cut(s) 725, 1120, 1662
Bsu36I CCTNAGG 1 cut(s) 184
BsuI GTATCC 2 cut(s) 1081, 1962
BsuRI GGCC 4 cut(s) 551, 1278, 1293, 2023
BtgZI GCGATG 1 cut(s) 1789
BtsCI GGATG 9 cut(s) 166, 388, 455, 583, 776, 802, 884, 1064, 1977
BtsIMutI CAGTG 8 cut(s) 204, 571, 586, 1036, 1230, 1287, 1837, 1845
BveI ACCTGC 1 cut(s) 2095
Cac8I GCNNGC 3 cut(s) 747, 1627, 2182
CaiI CAGNNNCTG 1 cut(s) 485
CciI TCATGA 1 cut(s) 1960
CfoI GCGC 1 cut(s) 881
Cfr13I GGNCC 5 cut(s) 549, 1277, 1291, 1570, 2141
CsiI ACCWGGT 1 cut(s) 1407
Csp6I GTAC 3 cut(s) 121, 297, 538
CspCI CAANNNNNGTGG 2 cut(s) 343, 378
CviQI GTAC 3 cut(s) 121, 297, 538
DdeI CTNAG 9 cut(s) 184, 525, 617, 1095, 1371, 1483, 1666, 2079, 2119
DpnI GATC 8 cut(s) 387, 727, 733, 853, 1122, 1664, 1935, 2019
DpnII GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
DraI TTTAAA 1 cut(s) 1366
EaeI YGGCCR 1 cut(s) 2021
Ecl136II GAGCTC 1 cut(s) 381
Eco24I GRGCYC 1 cut(s) 383
Eco31I GGTCTC 2 cut(s) 156, 525
Eco47I GGWCC 2 cut(s) 1570, 2141
Eco53kI GAGCTC 1 cut(s) 381
Eco57I CTGAAG 3 cut(s) 228, 681, 1379
Eco81I CCTNAGG 1 cut(s) 184
Eco88I CYCGRG 1 cut(s) 1591
Eco91I GGTNACC 1 cut(s) 786
EcoICRI GAGCTC 1 cut(s) 381
EcoO109I RGGNCCY 3 cut(s) 1291, 1570, 2141
EcoO65I GGTNACC 1 cut(s) 786
EcoRII CCWGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
EcoT22I ATGCAT 2 cut(s) 1064, 1979
EcoT38I GRGCYC 1 cut(s) 383
FalI AAGNNNNNCTT 2 cut(s) 2128, 2160
FaqI GGGAC 3 cut(s) 771, 1628, 1926
FauI CCCGC 1 cut(s) 509
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 2009
Fnu4HI GCNGC 4 cut(s) 308, 560, 872, 1227
FokI GGATG 9 cut(s) 153, 375, 442, 590, 783, 809, 871, 1071, 1964
FriOI GRGCYC 1 cut(s) 383
Fsp4HI GCNGC 4 cut(s) 308, 560, 872, 1227
FspBI CTAG 4 cut(s) 746, 1259, 1298, 1820
GlaI GCGC 1 cut(s) 880
GluI GCNGC 4 cut(s) 308, 560, 872, 1227
GsaI CCCAGC 1 cut(s) 2054
GsuI CTGGAG 1 cut(s) 296
HaeII RGCGCY 1 cut(s) 882
HaeIII GGCC 4 cut(s) 551, 1278, 1293, 2023
HapII CCGG 2 cut(s) 729, 1344
HhaI GCGC 1 cut(s) 881
Hin6I GCGC 1 cut(s) 879
HinP1I GCGC 1 cut(s) 879
HincII GTYRAC 1 cut(s) 261
HindII GTYRAC 1 cut(s) 261
HindIII AAGCTT 1 cut(s) 1513
HinfI GANTC 9 cut(s) 75, 189, 317, 597, 941, 1589, 1643, 1677, 2006
HpaII CCGG 2 cut(s) 729, 1344
HphI GGTGA 4 cut(s) 47, 780, 1274, 1743
Hpy166II GTNNAC 7 cut(s) 261, 352, 610, 652, 1609, 2010, 2044
Hpy188I TCNGA 8 cut(s) 74, 385, 528, 1441, 1669, 1792, 2035, 2122
Hpy188III TCNNGA 9 cut(s) 186, 689, 729, 938, 1344, 1586, 1593, 1961, 1971
Hpy8I GTNNAC 7 cut(s) 261, 352, 610, 652, 1609, 2010, 2044
HpyAV CCTTC 9 cut(s) 203, 257, 705, 748, 842, 925, 1259, 1763, 2154
HpyCH4III ACNGT 1 cut(s) 1362
HpyCH4IV ACGT 3 cut(s) 927, 1537, 1736
HpyF10VI GCNNNNNNNGC 1 cut(s) 96
HpyF3I CTNAG 9 cut(s) 184, 525, 617, 1095, 1371, 1483, 1666, 2079, 2119
HpySE526I ACGT 3 cut(s) 927, 1537, 1736
HspAI GCGC 1 cut(s) 879
Kpn2I TCCGGA 2 cut(s) 728, 1343
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
LmnI GCTCC 2 cut(s) 315, 886
Lsp1109I GCAGC 3 cut(s) 319, 858, 1213
LweI GCATC 5 cut(s) 1049, 1129, 1964, 1986, 2138
MabI ACCWGGT 1 cut(s) 1407
MaeI CTAG 4 cut(s) 746, 1259, 1298, 1820
MaeII ACGT 3 cut(s) 927, 1537, 1736
MaeIII GTNAC 7 cut(s) 35, 569, 775, 786, 803, 1749, 2158
MalI GATC 8 cut(s) 387, 727, 733, 853, 1122, 1664, 1935, 2019
MboI GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
MboII GAAGA 7 cut(s) 395, 842, 936, 1454, 1612, 1709, 2135
MfeI CAATTG 1 cut(s) 740
MflI RGATCY 3 cut(s) 725, 1120, 1662
MhlI GDGCHC 2 cut(s) 72, 383
MlyI GAGTC 3 cut(s) 1583, 1671, 2015
MmeI TCCRAC 2 cut(s) 454, 2013
Mph1103I ATGCAT 2 cut(s) 1064, 1979
MroI TCCGGA 2 cut(s) 728, 1343
MroXI GAANNNNTTC 1 cut(s) 596
MseI TTAA 9 cut(s) 15, 174, 339, 842, 1082, 1206, 1365, 1860, 1880
MslI CAYNNNNRTG 4 cut(s) 281, 576, 591, 889
MspI CCGG 2 cut(s) 729, 1344
MspR9I CCNGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
MunI CAATTG 1 cut(s) 740
Mva1269I GAATGC 1 cut(s) 2090
MvaI CCWGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
MwoI GCNNNNNNNGC 1 cut(s) 96
NdeII GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
NheI GCTAGC 1 cut(s) 745
NlaIV GGNNCC 5 cut(s) 428, 727, 936, 1406, 1571
NmuCI GTSAC 6 cut(s) 35, 569, 775, 786, 803, 1749
NsiI ATGCAT 2 cut(s) 1064, 1979
NspI RCATGY 3 cut(s) 987, 1750, 2050
PaeR7I CTCGAG 1 cut(s) 1591
PagI TCATGA 1 cut(s) 1960
PciI ACATGT 1 cut(s) 1746
PcsI WCGNNNNNNNCGW 1 cut(s) 1019
PctI GAATGC 1 cut(s) 2090
PdmI GAANNNNTTC 1 cut(s) 596
PfeI GAWTC 6 cut(s) 75, 189, 317, 597, 941, 1643
PflMI CCANNNNNTGG 1 cut(s) 485
PfoI TCCNGGA 2 cut(s) 312, 458
PkrI GCNGC 4 cut(s) 309, 561, 873, 1228
PleI GAGTC 3 cut(s) 1583, 1671, 2014
PpsI GAGTC 3 cut(s) 1583, 1671, 2014
PpuMI RGGWCCY 2 cut(s) 1570, 2141
PscI ACATGT 1 cut(s) 1746
PsiI TTATAA 2 cut(s) 231, 1550
Psp124BI GAGCTC 1 cut(s) 383
Psp1406I AACGTT 1 cut(s) 1537
Psp5II RGGWCCY 2 cut(s) 1570, 2141
Psp6I CCWGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
PspEI GGTNACC 1 cut(s) 786
PspFI CCCAGC 1 cut(s) 2050
PspGI CCWGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
PspN4I GGNNCC 5 cut(s) 428, 727, 936, 1406, 1571
PspPI GGNCC 5 cut(s) 549, 1277, 1291, 1570, 2141
PspPPI RGGWCCY 2 cut(s) 1570, 2141
PsrI GAACNNNNNNTAC 2 cut(s) 1835, 1867
PstI CTGCAG 1 cut(s) 876
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 3 cut(s) 725, 1120, 1662
RsaI GTAC 3 cut(s) 122, 298, 539
RsaNI GTAC 3 cut(s) 121, 297, 538
RseI CAYNNNNRTG 4 cut(s) 281, 576, 591, 889
SacI GAGCTC 1 cut(s) 383
SaqAI TTAA 9 cut(s) 15, 174, 339, 842, 1082, 1206, 1365, 1860, 1880
SatI GCNGC 4 cut(s) 308, 560, 872, 1227
Sau3AI GATC 8 cut(s) 385, 725, 731, 851, 1120, 1662, 1933, 2017
Sau96I GGNCC 5 cut(s) 549, 1277, 1291, 1570, 2141
ScaI AGTACT 1 cut(s) 298
SchI GAGTC 3 cut(s) 1583, 1671, 2015
ScrFI CCNGG 6 cut(s) 87, 314, 460, 480, 1196, 1409
SduI GDGCHC 2 cut(s) 72, 383
SexAI ACCWGGT 1 cut(s) 1407
SfaNI GCATC 5 cut(s) 1049, 1129, 1964, 1986, 2138
SfcI CTRYAG 1 cut(s) 872
Sfr274I CTCGAG 1 cut(s) 1591
SinI GGWCC 2 cut(s) 1570, 2141
SlaI CTCGAG 1 cut(s) 1591
SmiMI CAYNNNNRTG 4 cut(s) 281, 576, 591, 889
SmlI CTYRAG 2 cut(s) 1104, 1591
SmoI CTYRAG 2 cut(s) 1104, 1591
SsiI CCGC 6 cut(s) 103, 516, 559, 562, 1056, 2182
SspI AATATT 2 cut(s) 628, 1202
SspMI CTAG 4 cut(s) 746, 1259, 1298, 1820
SstI GAGCTC 1 cut(s) 383
StyD4I CCNGG 6 cut(s) 85, 312, 458, 478, 1194, 1407
TaaI ACNGT 1 cut(s) 1362
TaiI ACGT 3 cut(s) 930, 1540, 1739
TaqI TCGA 2 cut(s) 497, 1592
TatI WGTACW 2 cut(s) 296, 537
TauI GCSGC 1 cut(s) 562
TfiI GAWTC 6 cut(s) 75, 189, 317, 597, 941, 1643
Tru1I TTAA 9 cut(s) 15, 174, 339, 842, 1082, 1206, 1365, 1860, 1880
Tru9I TTAA 9 cut(s) 15, 174, 339, 842, 1082, 1206, 1365, 1860, 1880
TscAI CASTG 8 cut(s) 211, 578, 593, 1036, 1237, 1287, 1837, 1852
TseFI GTSAC 6 cut(s) 35, 569, 775, 786, 803, 1749
TseI GCWGC 3 cut(s) 307, 871, 1226
Tsp45I GTSAC 6 cut(s) 35, 569, 775, 786, 803, 1749
TspDTI ATGAA 8 cut(s) 13, 431, 828, 1178, 1476, 1483, 1667, 2083
TspGWI ACGGA 3 cut(s) 738, 809, 915
TspRI CASTG 8 cut(s) 211, 578, 593, 1036, 1237, 1287, 1837, 1852
Van91I CCANNNNNTGG 1 cut(s) 485
VpaK11BI GGWCC 2 cut(s) 1570, 2141
XapI RAATTY 2 cut(s) 677, 1890
XceI RCATGY 3 cut(s) 987, 1750, 2050
XcmI CCANNNNNNNNNTGG 2 cut(s) 359, 955
XhoI CTCGAG 1 cut(s) 1591
XmiI GTMKAC 1 cut(s) 2009
XmnI GAANNNNTTC 1 cut(s) 596
XspI CTAG 4 cut(s) 746, 1259, 1298, 1820
ZrmI AGTACT 1 cut(s) 298
Zsp2I ATGCAT 2 cut(s) 1064, 1979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.