Rw5G004170

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
4200178 .. 4213083
12906 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004170.1

Sequence Viewer

Length: 5025 bp
ATGAATTTTCCAAAAGGTCTGTTGAATGCATTATTGCTTCAGCTCCTTCTTCTCCAGATCTCCACTTCTTTAGACACCATCAGTTTTGATCAATCCATTAAAGACGGCGAGTTGCTGGTCTCGAAAAATGAAACCTTTGTGCTTGGATTCTTTAGTCCCGGCACTTCTAGCAACCGGTACGTTGGTATATGGTACAAGTTTTCAGATGATATGGTTGTTTGGGTGGCAAATAGAGACAACCCTGTCAATGACACCACAGGAATCCTCACACTTAGTTCTGATGGAAATCTAGTACTACTTCGAAACAACAGTCTAGGCCTACCTCTCTGGTCAACAAGTGTTTCTGTCTCATCATCAAGTAAAAACACTACAGCAGCACAGCTACTGGATTCAGGAAACTTTGTTTTGGTCCAACAAGAAAGCCAGAACGTTTTATGGCAAAGCTCTGATCATCCTACACATATTCTTCTTGCAAGTATGAAAATTGGGTTGGACAGGAAAAGGGGCATCGATCGCTATATGACTTCTTGGAACTCAAACAATGACCCGGGGACTGGGAATTGTTCGTTGAGGATGGAACCAAATGGGTCTCCACAGTTGATCTTGTACAAGAATGAGGCAAAGTTGTGGCGGTCGGGTCAATGGAATGGGATTCAGTGGGGTGGCATACCAGGAATGACCCCCAACAATGTGTTCAGCATTAGTTTTGTCAACAATCAAGATGAAGTTACTGTGACATGGAAAGTTCTTGACCCTTCAATTTTCTCTGTTATAACGGTGGATGGGTCTGGACAGATACAACAGCTAATATGGCAGGGAAAGCAGCAAGGCTGGGTTGCAGTTTGGTCAGACCCAATAGATGCTTGTGACAGCTATGGGAAGTGCGGTCCATTCGGGAATTGCGATCCCTACACAGTCAGTGGGTTCAATTGTACATGTTTTCCGGGATATGAACCCAACTCACCTCAAGATTGGGATATAAGGGATGGATCAGGTGGGTGCAAGAGACAGGAGGGGTCAATATCCATGTGTAGAAATGGCGAAGGGTTTGTGAAGATGGATCATGTGAAGGTTCCAGATACTTCTGCAATCAAATTAGAGACGAGTTTGAGTTTGGAAGCGTGTGAGAAGGAGTGTTTGAGTAACTGCTCGTGCTTGGCGTATGCGGTTGCAGATGTGAGGAATGGTGGGAGTGGATGCATGACATGGTATGGGGATCTCATGGATACTAAGCAATTTACAGAAGGAGGGGAAGCTTTGTATGTAAGAGCTGATGCAATGGTTTCAGTTCAGTATACAAAGAAGTCAGGAGGAGAGTCCTCTGCCAACAACGGGAGACTGGCTATTATATTGGGAGTGTCAATTTCTGTTGCCTCATTTCTCACCATTGCTGTTTTATGTTGGTTTAAGAGAAGGAAAACTAAAGGGAGAAGAGGACAACCGAAATTGCTGAATGATATTGCTTCTGGTTCAAGAAGCCGTGAAGATTTGCCAATTGAAAATGATGTTGATGAACAGAGAGGAAAGGCAGATTTACCTTTTTTTGATTTAAGCACCATAGTTGAAGCCACAGAGGAGTTCTCTTCTGCTAACATGCTTGGACATGGTGGCTTTGGCATAGTGTATAAGGGAAGTCTACCTGATGGACAGGAAATAGCTGTCAAAAGATTATCAAGAAATTCAGGACAAGGTGTAGAAGAATTCAAGAATGAAGTCAAGCTTATAGCAAAACTACAACATAGAAATCTTGTGAGGCTTTTTGGTTGCTGCATAGATAAAGAAGAGCGAATGTTAATCTATGAATACATGCCAAACCGAAGCTTGGACTTGTTCATTTTTGATAAAAACAAAAGGTCATTGTTGGACTGGGGAAAGCGGTTTCAAATTATTATCGGGATTGCTCGGGGAGTCCTATATCTTCATCAAGATTCGAGACTGAAAATAATCCATAGGGATCTGAAAGCAAGCAATGTGTTATTGGATTCATCAATGAACCCAAAAATATCAGATTTTGGCATGGCAAGAATGTTTGGAGATGACCAAATCGAAGCAAATACAAACAGAGTCGTGGGAACATATGGTTACATGTCACCCGAGTATGCTATGGATGGACTGTATTCAACAAAATCTGATGTGTTTAGCTTTGGAGTCTTAGCACTGGAGATCATTTGTGGCAAGAAGAACAATTTCCAATTCGAAGATTCCTATCTGAATTTGGTTGGACAATTATGGGACTTGTGGATAGAGGGAAAAGCCTTGGATATAGTTGATTCTTCGTTGGGTCAGTCATACCCTACTCATGAAGTTATGAGATGCATCCAAATTGGGCTTTTATGTGTGCAAGAAAATGCAATAGATCGACCAACAATGTTGGATGTTGTATTCATGCTGGGGAATGAAACTACTCTACTGCGTCCGAAAAAGGCAGCATTTAGTTTCAAGAACAGTGCCCCAGATTCTTCAACATCTAGGGGAGCTTCTTCTGTAAATGATGTAACAGTTACAGTTATAGAAGCTCGAACCAAGTCCTTCCGCAAATTTAGATATGCAATTATGCATTTTGCAATAGACTTTCTGAATACATTGCTTCAGCTTCTTCTTCTTCTTCAGCTGTGCCATTCTTTGGACACAACTACCATTTCAAGCAAATCCATCAAAGATGGTGACTTCCTTGTCTCTGAAAACCAGACTTTTGTGCTTGGATTCTTTAGTCCTGGTACATCAGGCAACCGCTATGTTGGTATTTGGTATAAGTTCTCAGAAGACATGGTTGTGTGGGTAGCTAACAGAGACAATCCTGTCAATGATACCTCAGGTATCCTCACAATTAGTACTGATGGAAATCTTTCACTACTTCATAACAGCAGTCGAGGCCCTCCTCTGTGGTCAACAAATGTTTCTGTCTCGCCAGTAAGTAACAATAGTACTATGGTGCAGCTCCTGGATTCAGGAAATCTTGTCTTGGTTAATCAGCTGGTCAACAACCAGAGTGGTGTCTTATGGCAGAGCTTTGATCATCCTACACATGTTCTTCTTGCAAACATGAAAATTGGGTTGGACCATGGTAAGAACATATTCCTCACATCCTGGAACTCAAAAAATGACCCAGGAACTGGGGTTTGCTCATTAAAGACAGAACCAAACGGGTCCCCACAAATAATCTTGTACAAGAGTAGGACAAAGTGGTGGCGGTCAGGTCAATGGAATGGGCTTCACTGGAATGGATTACCAAACATAAACAGACAAAGCAACAATCATGCATTTGACATAGCTTTTGTGAACAACAAAGATGAGGTTACTACAAAATGGCTTGTTCTTGACCCATCAGTAATCTCGGTAATAGCAATTGACGGATCTGGATCAATCCAACAACTAGCATGGCAGGGACAGAGGCAAGGGTGGGTCACAATCTGGTCAGCGCCAACAGATGTGTGTGACAAGTATGGTAGATGTGGTCGATTTGGTATTTGTAATACATACACTGCTAACTGGGAAAAATGTGCATGCTTTCCTGGATACGAACCCAACTCCCCAGAGGATTGGAAATTAAGAGAAGGGTCAGGTGGGTGCAAGAGGCAGAAGGGAGCTCCATCCATGTGTAAGAATGGAGAGGGATTTGTAAAGATACCAAACGTGAAGGTTCCAGATCCTTCCACAATCAAATTGGACATCAATTTGACTATGGCAGCATGTGAGCAGAAGTGTTTGAGTAACTGCTCATGCTTGGCATATGCCAGTGCAGATGTGAGGAACGGAGGCAGTGGATGCATGACATGGTATGGAGATTTAATGGACACTACGCAATTTACTCAGGGACAAGGACAAGATCTGTACGTACGAGCTGATGCAATAGTCACAGCTAAGTACACGAAGAAGTCAAAGAGGTTCCTTGCCAAAAAGGGGATGTGGTTGATTTTGGTATTCCCACCCATTGCTATGATATTCTTGATCTTTTTTGGATGTTGGTGTTTAAGGAGGAAGACAAAAGGCTCTCTAAGGGAAACGAAGCAATATGGAAGTACAACTCACAAAGACCTGGAATATTTTGATCTAAAGAGCATACTTGTTGCCACAGACAATTTCTCCACTGCTAACAAGCTAGGCGAAGGAGGATTTGGCTCAGTGTATAAGGGCCTACTAGCTAATGGAGAGGAGATTGCTGTGAAAAGATTATCAAAGAACTCCGGACAAGGTTTAGAACAGTTTAAAGCTGAGGTTAAGCTGATAGCAAAACTTCAGCACAGGAACCTGGTCAGGCTTCTTGGTTGTTGCATCAATGCAGAAGAGAAGATGTTGATTTATGAATACTTGCCAAACAAGAGTTTGGACTTTTTCATATTTGGTAGAAGTAGAAGCTTGTCGATAGACTGGAAAGACCGTTTTGACATTATAAATGGAATTGCTCGAGGCATCTTATATCTCCATCAAGACTCAAGATTAAAAATTATCCACAGGGACATAAAAGCTAGCAATGTCTTATTGGATTCCACAATGAACCCAAAGATCTCAGATTTTGGACTCGCTAAAATGATAGGGGAAGACCAAATACAAGCAAATACAAACAGAGTGATTGGAACGTATGGCTACATGTCACCTGAATATGCAATGGAAGGGCGATATTCAACAAAATCTGATGTTTTTAGCTTTGGTGTCTTACTGCTAGAGATCATCAGTGGCAAAAGGAACACTAACTACAATCTTGAGAGCCCCTCCCCCAATTTGATTGGACAAATTTGGGATATGTGGAGAGAGGGACAAGCATTGGGAATAGTTGATCCTTCTTTGAGTTCATATCCTGCTCATGAGGTTTCAAGATGCATCCACATCGGGCTACTATGCGTGCAAGAATCTACAACAGATCGGCCAACAATGTCGGAAGTAGTTTACATGTTGGGCAAAGAAACACCTCTTACGTCTCCTAAGAAACCTGCATTCATATTACAATCCAGCAATCCAAACTCAGAAGCACCAAGAAGAGGACCTTCTCTAAATAATGTAACAATAACAATGCTTGAAGCCCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1674

Amino Acids

186.04

Weight (kDa)

7.94

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 177 4.2e-32 D-mannose binding lectin
S_locus_glycop PF00954 210 - 320 1.4e-26 S-locus glycoprotein domain
PAN_2 PF08276 344 - 410 2.2e-20 PAN-like domain
Pkinase PF00069 529 - 728 3.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 530 - 793 6.1e-46 Protein tyrosine and serine/threonine kinase
B_lectin PF01453 924 - 1030 1.6e-29 D-mannose binding lectin
S_locus_glycop PF00954 1063 - 1176 1.1e-25 S-locus glycoprotein domain
PAN_2 PF08276 1200 - 1266 6.7e-21 PAN-like domain
Pkinase PF00069 1362 - 1627 1.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1363 - 1629 3.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 773, 4391
AasI GACNNNNNNGTC 3 cut(s) 242, 2672, 2798
Acc36I ACCTGC 1 cut(s) 4936
AccB7I CCANNNNNTGG 2 cut(s) 2623, 3113
AccI GTMKAC 2 cut(s) 1295, 1636
AccIII TCCGGA 1 cut(s) 4184
AciI CCGC 8 cut(s) 631, 885, 1166, 1876, 2533, 2731, 3190, 5020
AclI AACGTT 1 cut(s) 429
AclWI GGATC 9 cut(s) 899, 997, 1068, 1224, 1962, 3361, 3367, 3641, 4769
AcoI YGGCCR 1 cut(s) 4862
AcsI RAATTY 6 cut(s) 4, 1678, 1700, 2212, 2537, 4731
AcuI CTGAAG 4 cut(s) 23, 2573, 2591, 4220
AfiI CCNNNNNNNGG 7 cut(s) 554, 1332, 1822, 2623, 3113, 3900, 4976
AflIII ACRYGT 5 cut(s) 935, 2085, 3025, 4587, 4887
AgeI ACCGGT 1 cut(s) 174
AjnI CCWGG 8 cut(s) 670, 2713, 2940, 3086, 3106, 3511, 4035, 4248
AjuI GAANNNNNNNTTGG 8 cut(s) 473, 505, 677, 709, 3038, 3070, 4098, 4130
Alw21I GWGCWC 1 cut(s) 3589
AlwI GGATC 9 cut(s) 899, 997, 1068, 1224, 1962, 3361, 3367, 3641, 4769
AlwNI CAGNNNCTG 3 cut(s) 385, 2941, 3113
Ama87I CYCGRG 4 cut(s) 547, 1902, 2093, 4404
Aor13HI TCCGGA 1 cut(s) 4184
AoxI GGCC 4 cut(s) 316, 2872, 4132, 4862
ApeKI GCWGC 6 cut(s) 374, 823, 1767, 2426, 2935, 3686
ApoI RAATTY 6 cut(s) 4, 1678, 1700, 2212, 2537, 4731
ArsI GACNNNNNNTTYG 4 cut(s) 295, 327, 3257, 3289
AsiGI ACCGGT 1 cut(s) 174
Asp700I GAANNNNTTC 3 cut(s) 2186, 2845, 3074
AspLEI GCGC 1 cut(s) 3421
AspS9I GGNCC 7 cut(s) 409, 887, 2873, 3058, 3147, 4132, 4979
AsuC2I CCSGG 4 cut(s) 159, 548, 549, 945
AsuHPI GGTGA 5 cut(s) 954, 1375, 2082, 2675, 4584
AsuII TTCGAA 2 cut(s) 301, 2196
AsuNHI GCTAGC 1 cut(s) 4466
AvaI CYCGRG 4 cut(s) 547, 1902, 2093, 4404
AvaII GGWCC 5 cut(s) 409, 887, 3058, 3147, 4979
AxyI CCTNAGG 1 cut(s) 2812
BaeGI GKGCMC 1 cut(s) 2452
BaeI ACNNNNGTAYC 2 cut(s) 169, 202
BanII GRGCYC 2 cut(s) 3589, 4709
BarI GAAGNNNNNNTAC 2 cut(s) 4530, 4562
BauI CACGAG 1 cut(s) 1150
BbsI GAAGAC 3 cut(s) 2769, 3986, 4545
Bbv12I GWGCWC 1 cut(s) 3589
BbvCI CCTCAGC 1 cut(s) 4212
BbvI GCAGC 6 cut(s) 386, 835, 1754, 2438, 2947, 3698
BceAI ACGGC 2 cut(s) 121, 1464
BcgI CGANNNNNNTGC 2 cut(s) 4807, 4841
BciT130I CCWGG 8 cut(s) 672, 2715, 2942, 3088, 3108, 3513, 4037, 4250
BciVI GTATCC 3 cut(s) 1219, 2828, 3509
BclI TGATCA 3 cut(s) 88, 448, 3013
BcnI CCSGG 4 cut(s) 159, 548, 549, 945
BfaI CTAG 9 cut(s) 168, 290, 314, 2469, 3374, 4100, 4139, 4467, 4661
BfmI CTRYAG 1 cut(s) 369
BfoI RGCGCY 1 cut(s) 3422
BfuAI ACCTGC 1 cut(s) 4936
BfuI GTATCC 3 cut(s) 1219, 2828, 3509
BglII AGATCT 3 cut(s) 57, 3826, 4503
BisI GCNGC 6 cut(s) 375, 824, 1768, 2427, 2936, 3687
BlsI GCNGC 6 cut(s) 376, 825, 1769, 2428, 2937, 3688
BmcAI AGTACT 3 cut(s) 294, 2833, 2926
Bme18I GGWCC 5 cut(s) 409, 887, 3058, 3147, 4979
BmeT110I CYCGRG 4 cut(s) 547, 1902, 2093, 4404
BmgT120I GGNCC 7 cut(s) 409, 887, 2873, 3058, 3147, 4132, 4979
BmiI GGNNCC 7 cut(s) 579, 1074, 3148, 3149, 3642, 3887, 4247
BmrI ACTGGG 4 cut(s) 564, 1876, 3123, 3499
BmtI GCTAGC 1 cut(s) 4470
BmuI ACTGGG 4 cut(s) 564, 1876, 3123, 3499
BpiI GAAGAC 3 cut(s) 2769, 3986, 4545
BplI GAGNNNNNCTC 4 cut(s) 1565, 1597, 4694, 4726
BpmI CTGGAG 2 cut(s) 38, 2180
Bpu10I CCTNAGC 1 cut(s) 4212
Bpu14I TTCGAA 2 cut(s) 301, 2196
BpuEI CTTGAG 3 cut(s) 951, 4417, 4721
BpuMI CCSGG 4 cut(s) 159, 548, 549, 945
Bsa29I ATCGAT 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 3835
BsaBI GATNNNNATC 4 cut(s) 285, 2205, 2841, 3358
BsaI GGTCTC 2 cut(s) 124, 594
BsaJI CCNNGG 5 cut(s) 547, 548, 2256, 3061, 3106
BsaWI WCCGGW 2 cut(s) 174, 4184
BsaXI ACNNNNNCTCC 2 cut(s) 4067, 4097
Bsc4I CCNNNNNNNGG 7 cut(s) 554, 1332, 1822, 2623, 3113, 3900, 4976
Bse118I RCCGGY 1 cut(s) 174
Bse21I CCTNAGG 1 cut(s) 2812
Bse3DI GCAATG 7 cut(s) 1284, 1386, 1975, 2582, 3930, 4477, 4611
Bse8I GATNNNNATC 4 cut(s) 285, 2205, 2841, 3358
BseAI TCCGGA 1 cut(s) 4184
BseBI CCWGG 8 cut(s) 672, 2715, 2942, 3088, 3108, 3513, 4037, 4250
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 5 cut(s) 547, 548, 2256, 3061, 3106
BseJI GATNNNNATC 4 cut(s) 285, 2205, 2841, 3358
BseLI CCNNNNNNNGG 7 cut(s) 554, 1332, 1822, 2623, 3113, 3900, 4976
BseMI GCAATG 7 cut(s) 1284, 1386, 1975, 2582, 3930, 4477, 4611
BseMII CTCAG 7 cut(s) 2772, 2826, 3824, 4134, 4203, 4521, 4974
BseRI GAGGAG 4 cut(s) 1326, 1589, 2868, 4166
BseSI GKGCMC 1 cut(s) 2452
BseXI GCAGC 6 cut(s) 386, 835, 1754, 2438, 2947, 3698
BseYI CCCAGC 2 cut(s) 831, 2389
BsgI GTGCAG 2 cut(s) 2954, 3759
Bsh1285I CGRYCG 2 cut(s) 514, 635
BshFI GGCC 4 cut(s) 318, 2874, 4134, 4864
BshTI ACCGGT 1 cut(s) 174
BshVI ATCGAT 1 cut(s) 510
BsiEI CGRYCG 2 cut(s) 514, 635
BsiHKAI GWGCWC 1 cut(s) 3589
BsiHKCI CYCGRG 4 cut(s) 547, 1902, 2093, 4404
BsiSI CCGG 5 cut(s) 159, 175, 548, 944, 4185
BsiWI CGTACG 1 cut(s) 3835
BslFI GGGAC 8 cut(s) 141, 565, 2246, 3133, 3399, 3828, 4469, 4767
BslI CCNNNNNNNGG 7 cut(s) 554, 1332, 1822, 2623, 3113, 3900, 4976
BsmBI CGTCTC 2 cut(s) 1094, 4920
BsmFI GGGAC 8 cut(s) 141, 565, 2246, 3133, 3399, 3828, 4469, 4767
BsmI GAATGC 2 cut(s) 31, 4931
BsnI GGCC 4 cut(s) 318, 2874, 4134, 4864
Bso31I GGTCTC 2 cut(s) 124, 594
BsoBI CYCGRG 4 cut(s) 547, 1902, 2093, 4404
Bsp119I TTCGAA 2 cut(s) 301, 2196
Bsp1286I GDGCHC 3 cut(s) 2452, 3589, 4709
Bsp13I TCCGGA 1 cut(s) 4184
Bsp1407I TGTACA 3 cut(s) 606, 932, 3165
Bsp19I CCATGG 1 cut(s) 3061
BspACI CCGC 8 cut(s) 631, 885, 1166, 1876, 2533, 2731, 3190, 5020
BspANI GGCC 4 cut(s) 318, 2874, 4134, 4864
BspCNI CTCAG 7 cut(s) 2771, 2825, 3823, 4133, 4204, 4520, 4973
BspDI ATCGAT 1 cut(s) 510
BspEI TCCGGA 1 cut(s) 4184
BspHI TCATGA 2 cut(s) 2299, 4801
BspLI GGNNCC 7 cut(s) 579, 1074, 3148, 3149, 3642, 3887, 4247
BspMI ACCTGC 1 cut(s) 4936
BspOI GCTAGC 1 cut(s) 4470
BspPI GGATC 9 cut(s) 899, 997, 1068, 1224, 1962, 3361, 3367, 3641, 4769
BspQI GCTCTTC 1 cut(s) 1776
BspT104I TTCGAA 2 cut(s) 301, 2196
BspTNI GGTCTC 2 cut(s) 124, 594
BsrDI GCAATG 7 cut(s) 1284, 1386, 1975, 2582, 3930, 4477, 4611
BsrFI RCCGGY 1 cut(s) 174
BsrGI TGTACA 3 cut(s) 606, 932, 3165
BssAI RCCGGY 1 cut(s) 174
BssECI CCNNGG 5 cut(s) 547, 548, 2256, 3061, 3106
BssNAI GTATAC 1 cut(s) 1296
BssSI CACGAG 1 cut(s) 1150
BssT1I CCWWGG 2 cut(s) 2256, 3061
Bst1107I GTATAC 1 cut(s) 1296
Bst2BI CACGAG 1 cut(s) 1150
Bst2UI CCWGG 8 cut(s) 672, 2715, 2942, 3088, 3108, 3513, 4037, 4250
Bst6I CTCTTC 5 cut(s) 1426, 1588, 1776, 4278, 4969
BstAPI GCANNNNNTGC 1 cut(s) 3765
BstAUI TGTACA 3 cut(s) 606, 932, 3165
BstBAI YACGTR 1 cut(s) 3835
BstBI TTCGAA 2 cut(s) 301, 2196
BstC8I GCNNGC 5 cut(s) 1966, 3505, 4468, 4841, 5020
BstDSI CCRYGG 1 cut(s) 3061
BstH2I RGCGCY 1 cut(s) 3422
BstHHI GCGC 1 cut(s) 3421
BstMCI CGRYCG 2 cut(s) 514, 635
BstMWI GCNNNNNNNGC 6 cut(s) 168, 513, 811, 820, 2871, 3765
BstNI CCWGG 8 cut(s) 672, 2715, 2942, 3088, 3108, 3513, 4037, 4250
BstNSI RCATGY 9 cut(s) 939, 1597, 1810, 2089, 3029, 3507, 3693, 4591, 4891
BstSFI CTRYAG 1 cut(s) 369
BstSLI GKGCMC 1 cut(s) 2452
BstSNI TACGTA 1 cut(s) 3835
BstV1I GCAGC 6 cut(s) 386, 835, 1754, 2438, 2947, 3698
BstV2I GAAGAC 3 cut(s) 2769, 3986, 4545
BstX2I RGATCY 7 cut(s) 57, 1216, 1954, 3353, 3646, 3826, 4503
BstXI CCANNNNNNTGG 1 cut(s) 3540
BstYI RGATCY 7 cut(s) 57, 1216, 1954, 3353, 3646, 3826, 4503
BstZ17I GTATAC 1 cut(s) 1296
Bsu15I ATCGAT 1 cut(s) 510
Bsu36I CCTNAGG 1 cut(s) 2812
BsuI GTATCC 3 cut(s) 1219, 2828, 3509
BsuRI GGCC 4 cut(s) 318, 2874, 4134, 4864
BsuTUI ATCGAT 1 cut(s) 510
BtgI CCRYGG 1 cut(s) 3061
BtsI GCAGTG 3 cut(s) 3480, 3766, 4086
BveI ACCTGC 1 cut(s) 4936
Cac8I GCNNGC 5 cut(s) 1966, 3505, 4468, 4841, 5020
CaiI CAGNNNCTG 3 cut(s) 385, 2941, 3113
CciI TCATGA 2 cut(s) 2299, 4801
CfoI GCGC 1 cut(s) 3421
Cfr10I RCCGGY 1 cut(s) 174
Cfr13I GGNCC 7 cut(s) 409, 887, 2873, 3058, 3147, 4132, 4979
Cfr9I CCCGGG 1 cut(s) 547
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 1 cut(s) 2402
CsiI ACCWGGT 1 cut(s) 4248
CspAI ACCGGT 1 cut(s) 174
CspCI CAANNNNNGTGG 2 cut(s) 2971, 3006
DraI TTTAAA 1 cut(s) 4207
DrdI GACNNNNNNGTC 3 cut(s) 242, 2672, 2798
DseDI GACNNNNNNGTC 3 cut(s) 242, 2672, 2798
EaeI YGGCCR 1 cut(s) 4862
Eam1104I CTCTTC 5 cut(s) 1426, 1588, 1776, 4278, 4969
EarI CTCTTC 5 cut(s) 1426, 1588, 1776, 4278, 4969
Ecl136II GAGCTC 1 cut(s) 3587
Eco105I TACGTA 1 cut(s) 3835
Eco130I CCWWGG 2 cut(s) 2256, 3061
Eco147I AGGCCT 1 cut(s) 318
Eco24I GRGCYC 2 cut(s) 3589, 4709
Eco31I GGTCTC 2 cut(s) 124, 594
Eco47I GGWCC 5 cut(s) 409, 887, 3058, 3147, 4979
Eco53kI GAGCTC 1 cut(s) 3587
Eco57I CTGAAG 4 cut(s) 23, 2573, 2591, 4220
Eco81I CCTNAGG 1 cut(s) 2812
Eco88I CYCGRG 4 cut(s) 547, 1902, 2093, 4404
EcoICRI GAGCTC 1 cut(s) 3587
EcoO109I RGGNCCY 4 cut(s) 2873, 3147, 4132, 4979
EcoRI GAATTC 1 cut(s) 1700
EcoRII CCWGG 8 cut(s) 670, 2713, 2940, 3086, 3106, 3511, 4035, 4248
EcoT14I CCWWGG 2 cut(s) 2256, 3061
EcoT22I ATGCAT 7 cut(s) 31, 1202, 2318, 2559, 3262, 3770, 4820
EcoT38I GRGCYC 2 cut(s) 3589, 4709
ErhI CCWWGG 2 cut(s) 2256, 3061
Esp3I CGTCTC 2 cut(s) 1094, 4920
FalI AAGNNNNNCTT 4 cut(s) 1704, 1736, 4966, 4998
FaqI GGGAC 8 cut(s) 141, 565, 2246, 3133, 3399, 3828, 4469, 4767
FauNDI CATATG 2 cut(s) 2077, 3730
FbaI TGATCA 3 cut(s) 88, 448, 3013
FblI GTMKAC 2 cut(s) 1295, 1636
Fnu4HI GCNGC 6 cut(s) 375, 824, 1768, 2427, 2936, 3687
FriOI GRGCYC 2 cut(s) 3589, 4709
Fsp4HI GCNGC 6 cut(s) 375, 824, 1768, 2427, 2936, 3687
FspBI CTAG 9 cut(s) 168, 290, 314, 2469, 3374, 4100, 4139, 4467, 4661
GlaI GCGC 1 cut(s) 3420
GluI GCNGC 6 cut(s) 375, 824, 1768, 2427, 2936, 3687
GsaI CCCAGC 2 cut(s) 835, 2393
GsuI CTGGAG 2 cut(s) 38, 2180
HaeII RGCGCY 1 cut(s) 3422
HaeIII GGCC 4 cut(s) 318, 2874, 4134, 4864
HapII CCGG 5 cut(s) 159, 175, 548, 944, 4185
HgaI GACGC 1 cut(s) 2402
HhaI GCGC 1 cut(s) 3421
Hin6I GCGC 1 cut(s) 3419
HinP1I GCGC 1 cut(s) 3419
HincII GTYRAC 4 cut(s) 333, 712, 2889, 2980
HindII GTYRAC 4 cut(s) 333, 712, 2889, 2980
HindIII AAGCTT 4 cut(s) 1254, 1718, 1819, 4354
HpaII CCGG 5 cut(s) 159, 175, 548, 944, 4185
HphI GGTGA 5 cut(s) 954, 1375, 2082, 2675, 4584
Hpy166II GTNNAC 9 cut(s) 333, 712, 1296, 1637, 2889, 2980, 3280, 3867, 4885
Hpy8I GTNNAC 9 cut(s) 333, 712, 1296, 1637, 2889, 2980, 3280, 3867, 4885
HpyCH4IV ACGT 6 cut(s) 180, 429, 3633, 3834, 4577, 4913
HpyF10VI GCNNNNNNNGC 6 cut(s) 168, 513, 811, 820, 2871, 3765
HpySE526I ACGT 6 cut(s) 180, 429, 3633, 3834, 4577, 4913
HspAI GCGC 1 cut(s) 3419
KflI GGGWCCC 1 cut(s) 3147
Kpn2I TCCGGA 1 cut(s) 4184
Ksp22I TGATCA 3 cut(s) 88, 448, 3013
LguI GCTCTTC 1 cut(s) 1776
LmnI GCTCC 5 cut(s) 48, 2474, 2943, 3584, 3592
Lsp1109I GCAGC 6 cut(s) 386, 835, 1754, 2438, 2947, 3698
MabI ACCWGGT 1 cut(s) 4248
MaeI CTAG 9 cut(s) 168, 290, 314, 2469, 3374, 4100, 4139, 4467, 4661
MaeII ACGT 6 cut(s) 180, 429, 3633, 3834, 4577, 4913
MfeI CAATTG 3 cut(s) 928, 1494, 3345
MflI RGATCY 7 cut(s) 57, 1216, 1954, 3353, 3646, 3826, 4503
MhlI GDGCHC 3 cut(s) 2452, 3589, 4709
MlyI GAGTC 6 cut(s) 1325, 1917, 2073, 2157, 4424, 4512
MmeI TCCRAC 8 cut(s) 436, 471, 1842, 2200, 2352, 3036, 3391, 4854
Mph1103I ATGCAT 7 cut(s) 31, 1202, 2318, 2559, 3262, 3770, 4820
MroI TCCGGA 1 cut(s) 4184
MroXI GAANNNNTTC 3 cut(s) 2186, 2845, 3074
MslI CAYNNNNRTG 4 cut(s) 2771, 3219, 3595, 3935
MspA1I CMGCKG 2 cut(s) 2611, 2974
MspI CCGG 5 cut(s) 159, 175, 548, 944, 4185
MunI CAATTG 3 cut(s) 928, 1494, 3345
Mva1269I GAATGC 2 cut(s) 31, 4931
MvaI CCWGG 8 cut(s) 672, 2715, 2942, 3088, 3108, 3513, 4037, 4250
MwoI GCNNNNNNNGC 6 cut(s) 168, 513, 811, 820, 2871, 3765
NciI CCSGG 4 cut(s) 159, 548, 549, 945
NcoI CCATGG 1 cut(s) 3061
NdeI CATATG 2 cut(s) 2077, 3730
NheI GCTAGC 1 cut(s) 4466
NlaIV GGNNCC 7 cut(s) 579, 1074, 3148, 3149, 3642, 3887, 4247
NmuCI GTSAC 8 cut(s) 733, 866, 2088, 2663, 3403, 3434, 3853, 4590
NsiI ATGCAT 7 cut(s) 31, 1202, 2318, 2559, 3262, 3770, 4820
NspI RCATGY 9 cut(s) 939, 1597, 1810, 2089, 3029, 3507, 3693, 4591, 4891
NspV TTCGAA 2 cut(s) 301, 2196
PaeI GCATGC 1 cut(s) 3507
PaeR7I CTCGAG 1 cut(s) 4404
PagI TCATGA 2 cut(s) 2299, 4801
PceI AGGCCT 1 cut(s) 318
PciI ACATGT 5 cut(s) 935, 2085, 3025, 4587, 4887
PciSI GCTCTTC 1 cut(s) 1776
PcsI WCGNNNNNNNCGW 2 cut(s) 900, 1157
PctI GAATGC 2 cut(s) 31, 4931
PdmI GAANNNNTTC 3 cut(s) 2186, 2845, 3074
Pfl23II CGTACG 1 cut(s) 3835
PflMI CCANNNNNTGG 2 cut(s) 2623, 3113
PfoI TCCNGGA 4 cut(s) 943, 2940, 3086, 3511
PinAI ACCGGT 1 cut(s) 174
PkrI GCNGC 6 cut(s) 376, 825, 1769, 2428, 2937, 3688
Ple19I CGATCG 1 cut(s) 514
PleI GAGTC 6 cut(s) 1324, 1916, 2072, 2156, 4424, 4512
PpsI GAGTC 6 cut(s) 1324, 1916, 2072, 2156, 4424, 4512
Ppu21I YACGTR 1 cut(s) 3835
PpuMI RGGWCCY 2 cut(s) 3147, 4979
PscI ACATGT 5 cut(s) 935, 2085, 3025, 4587, 4887
PsiI TTATAA 2 cut(s) 773, 4391
Psp124BI GAGCTC 1 cut(s) 3589
Psp1406I AACGTT 1 cut(s) 429
Psp5II RGGWCCY 2 cut(s) 3147, 4979
Psp6I CCWGG 8 cut(s) 670, 2713, 2940, 3086, 3106, 3511, 4035, 4248
PspFI CCCAGC 2 cut(s) 831, 2389
PspGI CCWGG 8 cut(s) 670, 2713, 2940, 3086, 3106, 3511, 4035, 4248
PspLI CGTACG 1 cut(s) 3835
PspN4I GGNNCC 7 cut(s) 579, 1074, 3148, 3149, 3642, 3887, 4247
PspPI GGNCC 7 cut(s) 409, 887, 2873, 3058, 3147, 4132, 4979
PspPPI RGGWCCY 2 cut(s) 3147, 4979
PspXI VCTCGAGB 1 cut(s) 4404
PsrI GAACNNNNNNTAC 2 cut(s) 4676, 4708
PstNI CAGNNNCTG 3 cut(s) 385, 2941, 3113
PsuI RGATCY 7 cut(s) 57, 1216, 1954, 3353, 3646, 3826, 4503
PvuI CGATCG 1 cut(s) 514
PvuII CAGCTG 2 cut(s) 2611, 2974
RseI CAYNNNNRTG 4 cut(s) 2771, 3219, 3595, 3935
SacI GAGCTC 1 cut(s) 3589
SapI GCTCTTC 1 cut(s) 1776
SatI GCNGC 6 cut(s) 375, 824, 1768, 2427, 2936, 3687
Sau96I GGNCC 7 cut(s) 409, 887, 2873, 3058, 3147, 4132, 4979
ScaI AGTACT 3 cut(s) 294, 2833, 2926
SchI GAGTC 6 cut(s) 1325, 1917, 2073, 2157, 4424, 4512
SduI GDGCHC 3 cut(s) 2452, 3589, 4709
SexAI ACCWGGT 1 cut(s) 4248
SfcI CTRYAG 1 cut(s) 369
Sfr274I CTCGAG 1 cut(s) 4404
SfuI TTCGAA 2 cut(s) 301, 2196
SinI GGWCC 5 cut(s) 409, 887, 3058, 3147, 4979
SlaI CTCGAG 1 cut(s) 4404
SmaI CCCGGG 1 cut(s) 549
SmiMI CAYNNNNRTG 4 cut(s) 2771, 3219, 3595, 3935
SmlI CTYRAG 4 cut(s) 966, 4404, 4432, 4700
SmoI CTYRAG 4 cut(s) 966, 4404, 4432, 4700
SnaBI TACGTA 1 cut(s) 3835
SphI GCATGC 1 cut(s) 3507
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 8 cut(s) 631, 885, 1166, 1876, 2533, 2731, 3190, 5020
SspI AATATT 1 cut(s) 4043
SspMI CTAG 9 cut(s) 168, 290, 314, 2469, 3374, 4100, 4139, 4467, 4661
SstI GAGCTC 1 cut(s) 3589
StuI AGGCCT 1 cut(s) 318
StyI CCWWGG 2 cut(s) 2256, 3061
TaiI ACGT 6 cut(s) 183, 432, 3636, 3837, 4580, 4916
TatI WGTACW 8 cut(s) 292, 606, 932, 2831, 2924, 3165, 3864, 4019
TseFI GTSAC 8 cut(s) 733, 866, 2088, 2663, 3403, 3434, 3853, 4590
TseI GCWGC 6 cut(s) 374, 823, 1767, 2426, 2935, 3686
Tsp45I GTSAC 8 cut(s) 733, 866, 2088, 2663, 3403, 3434, 3853, 4590
TspGWI ACGGA 2 cut(s) 3366, 3768
TspMI CCCGGG 1 cut(s) 547
Van91I CCANNNNNTGG 2 cut(s) 2623, 3113
VpaK11BI GGWCC 5 cut(s) 409, 887, 3058, 3147, 4979
XapI RAATTY 6 cut(s) 4, 1678, 1700, 2212, 2537, 4731
XceI RCATGY 9 cut(s) 939, 1597, 1810, 2089, 3029, 3507, 3693, 4591, 4891
XcmI CCANNNNNNNNNTGG 1 cut(s) 3661
XhoI CTCGAG 1 cut(s) 4404
XmaI CCCGGG 1 cut(s) 547
XmiI GTMKAC 2 cut(s) 1295, 1636
XmnI GAANNNNTTC 3 cut(s) 2186, 2845, 3074
XspI CTAG 9 cut(s) 168, 290, 314, 2469, 3374, 4100, 4139, 4467, 4661
ZrmI AGTACT 3 cut(s) 294, 2833, 2926
Zsp2I ATGCAT 7 cut(s) 31, 1202, 2318, 2559, 3262, 3770, 4820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.