RchiOBHm_Chr5g0035791

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Reverse (-)
29797994 .. 29801675
3682 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31463

Sequence Viewer

Length: 1857 bp
ATGAAGATAGGGCTGAACCGGCGGTCTGGGTTGGAGTGGCACCTAACATCTTGGAAGTCAAAAGATGACCCTGGAACCGGGAGTTGTACATATGGGATAGACCCCATGGGGTTTCCGCAGTTTTTTCTGCGCAAAGGTAGAGAAGCATTGTGGCGGACCGGCCCTTGGATCGGGGACAAATTGAACGCTCTACCTGTAATGACGGCTACCTTCTACAATGCAAGTTTTGTCAACAATGAAGACGAGATATCCTTAGTGTTTGCTATTGCTAAGGACTCATTGATCACAAGGGTGGTGATAGATGAATCAGGAATATTACAAGTGTTCGTGTGGAATGATCAATGGATCAAATTCTACTCCCACCCAACTGAGTGGTGTGATTACTATGGACAGTGTGGTCCAAATACTAACTGTGACTCAGAGAAGGACTATAAGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTAGTTTGAGTGTTGGTGAGAGTGGATGCATTAGGAAAGCGGGAGCATCCACATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGCGTGTAAAAATACCGGACTCATCTACGGCATATGTGAACATGAGTATGAGTTTGGAAGAGTGCAAACAAAATTGCTTGATGGATTGTTCTTGCACAGCTTACACGAGTGCAGATGATCGGGGAGGTGGGATTGGGTGTGTGACATGGCACGGGGACTTGATGGACATGAGGACTTTCTCCGATATTGGTCAAGATTTATATGTTCGAGTCGATGTAACTTCTTTAGCTATGAATATGGAAAGCGTAGGCAAAATAAATATTCATTTGAACTTACTTTTTTTGTGTTTGATAATAGGTAAGCGTAGGCAAAATAAATATTCATTTGAACTTACTGCTCGGTCAACCTACTTCGAAGAAGCTACTGGTAGATTAGTTCTTGATGATAGTATAATAAACTCGGAGTTACTATTATTTCATCTAAACACCATAGCCAACGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCCCCGTTTATAAGGGGATACTTTACGATGGAAAAGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACATAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGGTGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTCGGGGATTGCTAGAGGCTTATTATATCTTCATGAAGATTCAAGACTAAAAATTATCCATAGAGATCTAAAGGCCAGTAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAAACGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGACGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCAAAAAGAATGCTGGTTCCTATGAGAAGTATCCATATTCAAATTTGATTGGACATGTTTGGAAGTTGTGGAAAGAAGGTAGAGCTGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGTAGTTGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

618

Amino Acids

69.32

Weight (kDa)

6.09

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 51 - 157 4.9e-23 S-locus glycoprotein domain
PAN_2 PF08276 177 - 243 7.1e-23 PAN-like domain
PK_Tyr_Ser-Thr PF07714 338 - 606 2.2e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 338 - 540 1.8e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1056
AasI GACNNNNNNGTC 1 cut(s) 396
Acc16I TGCGCA 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 39
AccII CGCG 1 cut(s) 562
AciI CCGC 4 cut(s) 22, 116, 154, 515
AclWI GGATC 2 cut(s) 176, 353
AcoI YGGCCR 2 cut(s) 1114, 1793
AcsI RAATTY 3 cut(s) 350, 1645, 1778
AcuI CTGAAG 1 cut(s) 1497
AcvI CACGTG 1 cut(s) 447
AfaI GTAC 1 cut(s) 88
AfiI CCNNNNNNNGG 3 cut(s) 77, 165, 170
AflIII ACRYGT 4 cut(s) 527, 1492, 1563, 1657
AjiI CACGTC 1 cut(s) 1564
AjnI CCWGG 2 cut(s) 70, 454
AjuI GAANNNNNNNTTGG 4 cut(s) 1011, 1026, 1043, 1058
AleI CACNNNNGTG 2 cut(s) 290, 1765
AluBI AGCT 6 cut(s) 659, 788, 920, 1027, 1688, 1838
AluI AGCT 6 cut(s) 659, 788, 920, 1027, 1688, 1838
Alw21I GWGCWC 1 cut(s) 1288
AlwI GGATC 2 cut(s) 176, 353
Ama87I CYCGRG 1 cut(s) 1321
AoxI GGCC 5 cut(s) 160, 1045, 1114, 1392, 1793
ApeKI GCWGC 1 cut(s) 1835
ApoI RAATTY 3 cut(s) 350, 1645, 1778
Asp700I GAANNNNTTC 1 cut(s) 1146
AspLEI GCGC 2 cut(s) 132, 562
AspS9I GGNCC 4 cut(s) 156, 161, 398, 1046
AsuC2I CCSGG 1 cut(s) 79
AsuHPI GGTGA 7 cut(s) 307, 465, 503, 1220, 1512, 1727, 1839
AsuII TTCGAA 2 cut(s) 462, 912
AvaI CYCGRG 1 cut(s) 1321
AvaII GGWCC 2 cut(s) 156, 398
BalI TGGCCA 1 cut(s) 1116
BanI GGYRCC 1 cut(s) 39
BauI CACGAG 1 cut(s) 664
BbrPI CACGTG 1 cut(s) 447
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 1288
BbvI GCAGC 1 cut(s) 1847
BccI CCATC 3 cut(s) 634, 715, 1067
BceAI ACGGC 3 cut(s) 219, 603, 1073
BcgI CGANNNNNNTGC 2 cut(s) 1738, 1772
BciT130I CCWGG 2 cut(s) 72, 456
BciVI GTATCC 2 cut(s) 1056, 1644
BclI TGATCA 2 cut(s) 282, 337
BcnI CCSGG 1 cut(s) 79
BfaI CTAG 4 cut(s) 477, 1332, 1452, 1589
BfmI CTRYAG 1 cut(s) 1710
BfuI GTATCC 2 cut(s) 1056, 1644
BglII AGATCT 1 cut(s) 1384
BisI GCNGC 1 cut(s) 1836
BlsI GCNGC 1 cut(s) 1837
Bme1390I CCNGG 3 cut(s) 72, 79, 456
Bme18I GGWCC 2 cut(s) 156, 398
BmeT110I CYCGRG 1 cut(s) 1321
BmgBI CACGTC 1 cut(s) 1564
BmgT120I GGNCC 4 cut(s) 156, 161, 398, 1046
BmiI GGNNCC 4 cut(s) 41, 76, 1048, 1621
BmrFI CCNGG 3 cut(s) 72, 79, 456
BmsI GCATC 3 cut(s) 491, 530, 1822
BpiI GAAGAC 1 cut(s) 246
BplI GAGNNNNNCTC 2 cut(s) 1304, 1336
Bpu10I CCTNAGC 1 cut(s) 270
Bpu14I TTCGAA 2 cut(s) 462, 912
BpuMI CCSGG 1 cut(s) 79
BsaAI YACGTR 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 1223
BsaJI CCNNGG 5 cut(s) 70, 105, 164, 455, 1117
BsaWI WCCGGW 2 cut(s) 574, 1522
BsaXI ACNNNNNCTCC 2 cut(s) 995, 1025
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 165, 170
Bse118I RCCGGY 3 cut(s) 18, 158, 1791
Bse1I ACTGG 3 cut(s) 928, 1395, 1606
Bse3DI GCAATG 1 cut(s) 1539
Bse8I GATNNNNATC 1 cut(s) 1223
BseBI CCWGG 2 cut(s) 72, 456
BseDI CCNNGG 5 cut(s) 70, 105, 164, 455, 1117
BseGI GGATG 2 cut(s) 506, 521
BseJI GATNNNNATC 1 cut(s) 1223
BseLI CCNNNNNNNGG 3 cut(s) 77, 165, 170
BseMI GCAATG 1 cut(s) 1539
BseMII CTCAG 2 cut(s) 360, 432
BseNI ACTGG 3 cut(s) 928, 1395, 1606
BseXI GCAGC 1 cut(s) 1847
BsgI GTGCAG 1 cut(s) 690
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 5 cut(s) 162, 1047, 1116, 1394, 1795
BshNI GGYRCC 1 cut(s) 39
BsiHKAI GWGCWC 1 cut(s) 1288
BsiHKCI CYCGRG 1 cut(s) 1321
BsiSI CCGG 6 cut(s) 19, 78, 159, 575, 1523, 1792
BslFI GGGAC 2 cut(s) 188, 728
BslI CCNNNNNNNGG 3 cut(s) 77, 165, 170
BsmFI GGGAC 2 cut(s) 188, 728
BsmI GAATGC 2 cut(s) 1618, 1749
BsnI GGCC 5 cut(s) 162, 1047, 1116, 1394, 1795
BsoBI CYCGRG 1 cut(s) 1321
Bsp119I TTCGAA 2 cut(s) 462, 912
Bsp1286I GDGCHC 1 cut(s) 1288
Bsp1407I TGTACA 1 cut(s) 86
Bsp143I GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 4 cut(s) 22, 116, 154, 515
BspANI GGCC 5 cut(s) 162, 1047, 1116, 1394, 1795
BspCNI CTCAG 2 cut(s) 361, 431
BspFNI CGCG 1 cut(s) 562
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 4 cut(s) 41, 76, 1048, 1621
BspPI GGATC 2 cut(s) 176, 353
BspQI GCTCTTC 1 cut(s) 1845
BspT104I TTCGAA 2 cut(s) 462, 912
BspT107I GGYRCC 1 cut(s) 39
BsrDI GCAATG 1 cut(s) 1539
BsrFI RCCGGY 3 cut(s) 18, 158, 1791
BsrGI TGTACA 1 cut(s) 86
BsrI ACTGG 3 cut(s) 928, 1395, 1606
BssAI RCCGGY 3 cut(s) 18, 158, 1791
BssECI CCNNGG 5 cut(s) 70, 105, 164, 455, 1117
BssMI GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
BssSI CACGAG 1 cut(s) 664
BssT1I CCWWGG 3 cut(s) 105, 164, 1117
Bst2BI CACGAG 1 cut(s) 664
Bst2UI CCWGG 2 cut(s) 72, 456
Bst4CI ACNGT 3 cut(s) 393, 413, 1545
Bst6I CTCTTC 4 cut(s) 612, 1122, 1206, 1845
BstAUI TGTACA 1 cut(s) 86
BstBAI YACGTR 1 cut(s) 447
BstBI TTCGAA 2 cut(s) 462, 912
BstC8I GCNNGC 1 cut(s) 442
BstDEI CTNAG 4 cut(s) 253, 270, 369, 418
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 2 cut(s) 506, 521
BstFNI CGCG 1 cut(s) 562
BstHHI GCGC 2 cut(s) 132, 562
BstKTI GATC 6 cut(s) 171, 285, 340, 348, 679, 1387
BstMBI GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
BstMWI GCNNNNNNNGC 1 cut(s) 19
BstNI CCWGG 2 cut(s) 72, 456
BstNSI RCATGY 2 cut(s) 531, 1661
BstSCI CCNGG 3 cut(s) 70, 77, 454
BstSFI CTRYAG 1 cut(s) 1710
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 1 cut(s) 1847
BstV2I GAAGAC 1 cut(s) 246
BstX2I RGATCY 1 cut(s) 1384
BstXI CCANNNNNNTGG 1 cut(s) 372
BstYI RGATCY 1 cut(s) 1384
BsuI GTATCC 2 cut(s) 1056, 1644
BsuRI GGCC 5 cut(s) 162, 1047, 1116, 1394, 1795
BtgI CCRYGG 1 cut(s) 105
BtrI CACGTC 1 cut(s) 1564
BtsCI GGATG 2 cut(s) 506, 521
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 1 cut(s) 442
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 2 cut(s) 132, 562
Cfr10I RCCGGY 3 cut(s) 18, 158, 1791
Cfr13I GGNCC 4 cut(s) 156, 161, 398, 1046
CpoI CGGWCCG 1 cut(s) 156
CseI GACGC 1 cut(s) 1314
Csp6I GTAC 1 cut(s) 87
CspCI CAANNNNNGTGG 2 cut(s) 1476, 1511
CspI CGGWCCG 1 cut(s) 156
CviAII CATG 8 cut(s) 106, 528, 601, 705, 727, 1352, 1658, 1801
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 4 cut(s) 253, 270, 369, 418
DpnI GATC 6 cut(s) 170, 284, 339, 347, 678, 1386
DpnII GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
DrdI GACNNNNNNGTC 1 cut(s) 396
DseDI GACNNNNNNGTC 1 cut(s) 396
EaeI YGGCCR 2 cut(s) 1114, 1793
Eam1104I CTCTTC 4 cut(s) 612, 1122, 1206, 1845
EarI CTCTTC 4 cut(s) 612, 1122, 1206, 1845
EciI GGCGGA 1 cut(s) 169
Eco130I CCWWGG 3 cut(s) 105, 164, 1117
Eco32I GATATC 1 cut(s) 249
Eco47I GGWCC 2 cut(s) 156, 398
Eco57I CTGAAG 1 cut(s) 1497
Eco72I CACGTG 1 cut(s) 447
Eco88I CYCGRG 1 cut(s) 1321
EcoRII CCWGG 2 cut(s) 70, 454
EcoRV GATATC 1 cut(s) 249
EcoT14I CCWWGG 3 cut(s) 105, 164, 1117
EcoT22I ATGCAT 1 cut(s) 506
ErhI CCWWGG 3 cut(s) 105, 164, 1117
FaeI CATG 8 cut(s) 109, 531, 604, 708, 730, 1355, 1661, 1804
FaqI GGGAC 2 cut(s) 188, 728
FatI CATG 8 cut(s) 105, 527, 600, 704, 726, 1351, 1657, 1800
FauI CCCGC 1 cut(s) 508
FauNDI CATATG 3 cut(s) 91, 592, 1507
FbaI TGATCA 2 cut(s) 282, 337
Fnu4HI GCNGC 1 cut(s) 1836
FokI GGATG 2 cut(s) 508, 513
Fsp4HI GCNGC 1 cut(s) 1836
FspBI CTAG 4 cut(s) 477, 1332, 1452, 1589
FspI TGCGCA 1 cut(s) 131
GlaI GCGC 2 cut(s) 131, 561
GluI GCNGC 1 cut(s) 1836
HaeIII GGCC 5 cut(s) 162, 1047, 1116, 1394, 1795
HapII CCGG 6 cut(s) 19, 78, 159, 575, 1523, 1792
HgaI GACGC 1 cut(s) 1314
HhaI GCGC 2 cut(s) 132, 562
Hin1II CATG 8 cut(s) 109, 531, 604, 708, 730, 1355, 1661, 1804
Hin6I GCGC 2 cut(s) 130, 560
HinP1I GCGC 2 cut(s) 130, 560
HincII GTYRAC 2 cut(s) 232, 903
HindII GTYRAC 2 cut(s) 232, 903
HindIII AAGCTT 1 cut(s) 1025
HpaII CCGG 6 cut(s) 19, 78, 159, 575, 1523, 1792
HphI GGTGA 7 cut(s) 307, 465, 503, 1220, 1512, 1727, 1839
Hpy166II GTNNAC 3 cut(s) 232, 598, 903
Hpy188I TCNGA 5 cut(s) 421, 742, 961, 1152, 1561
Hpy188III TCNNGA 7 cut(s) 309, 550, 752, 938, 1312, 1352, 1362
Hpy8I GTNNAC 3 cut(s) 232, 598, 903
HpyAV CCTTC 9 cut(s) 220, 418, 536, 547, 1028, 1199, 1532, 1673, 1854
HpyCH4III ACNGT 3 cut(s) 393, 413, 1545
HpyCH4IV ACGT 3 cut(s) 446, 1492, 1563
HpyF10VI GCNNNNNNNGC 1 cut(s) 19
HpyF3I CTNAG 4 cut(s) 253, 270, 369, 418
HpySE526I ACGT 3 cut(s) 446, 1492, 1563
Hsp92II CATG 8 cut(s) 109, 531, 604, 708, 730, 1355, 1661, 1804
HspAI GCGC 2 cut(s) 130, 560
Ksp22I TGATCA 2 cut(s) 282, 337
Kzo9I GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
LguI GCTCTTC 1 cut(s) 1845
LmnI GCTCC 2 cut(s) 518, 1468
Lsp1109I GCAGC 1 cut(s) 1847
LweI GCATC 3 cut(s) 491, 530, 1822
MaeI CTAG 4 cut(s) 477, 1332, 1452, 1589
MaeII ACGT 3 cut(s) 446, 1492, 1563
MaeIII GTNAC 5 cut(s) 413, 700, 775, 963, 1518
MalI GATC 6 cut(s) 170, 284, 339, 347, 678, 1386
MboI GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
MflI RGATCY 1 cut(s) 1384
MhlI GDGCHC 1 cut(s) 1288
MlsI TGGCCA 1 cut(s) 1116
MluCI AATT 8 cut(s) 179, 350, 631, 1006, 1371, 1414, 1645, 1778
MluNI TGGCCA 1 cut(s) 1116
MlyI GAGTC 5 cut(s) 269, 410, 572, 777, 1250
MmeI TCCRAC 4 cut(s) 12, 1189, 1277, 1480
MnlI CCTC 5 cut(s) 677, 723, 1031, 1328, 1457
Mox20I TGGCCA 1 cut(s) 1116
Mph1103I ATGCAT 1 cut(s) 506
MroXI GAANNNNTTC 1 cut(s) 1146
MscI TGGCCA 1 cut(s) 1116
MseI TTAA 5 cut(s) 1134, 1182, 1269, 1292, 1823
MslI CAYNNNNRTG 5 cut(s) 290, 526, 605, 1765, 1852
Msp20I TGGCCA 1 cut(s) 1116
MspI CCGG 6 cut(s) 19, 78, 159, 575, 1523, 1792
MspR9I CCNGG 3 cut(s) 72, 79, 456
Mva1269I GAATGC 2 cut(s) 1618, 1749
MvaI CCWGG 2 cut(s) 72, 456
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 1 cut(s) 19
NciI CCSGG 1 cut(s) 79
NcoI CCATGG 1 cut(s) 105
NdeI CATATG 3 cut(s) 91, 592, 1507
NdeII GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
NlaIII CATG 8 cut(s) 109, 531, 604, 708, 730, 1355, 1661, 1804
NlaIV GGNNCC 4 cut(s) 41, 76, 1048, 1621
NmuCI GTSAC 3 cut(s) 413, 700, 1518
NsbI TGCGCA 1 cut(s) 131
NsiI ATGCAT 1 cut(s) 506
NspI RCATGY 2 cut(s) 531, 1661
NspV TTCGAA 2 cut(s) 462, 912
OliI CACNNNNGTG 2 cut(s) 290, 1765
PagI TCATGA 1 cut(s) 1351
PciI ACATGT 2 cut(s) 527, 1657
PciSI GCTCTTC 1 cut(s) 1845
PctI GAATGC 2 cut(s) 1618, 1749
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 6 cut(s) 305, 464, 1219, 1358, 1703, 1718
PkrI GCNGC 1 cut(s) 1837
PleI GAGTC 5 cut(s) 269, 410, 572, 776, 1250
PmaCI CACGTG 1 cut(s) 447
PmlI CACGTG 1 cut(s) 447
PpsI GAGTC 5 cut(s) 269, 410, 572, 776, 1250
Ppu21I YACGTR 1 cut(s) 447
PscI ACATGT 2 cut(s) 527, 1657
PsiI TTATAA 1 cut(s) 1056
Psp6I CCWGG 2 cut(s) 70, 454
PspCI CACGTG 1 cut(s) 447
PspGI CCWGG 2 cut(s) 70, 454
PspN4I GGNNCC 4 cut(s) 41, 76, 1048, 1621
PspPI GGNCC 4 cut(s) 156, 161, 398, 1046
PsuI RGATCY 1 cut(s) 1384
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
RseI CAYNNNNRTG 5 cut(s) 290, 526, 605, 1765, 1852
Rsr2I CGGWCCG 1 cut(s) 156
RsrII CGGWCCG 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 1845
SaqAI TTAA 5 cut(s) 1134, 1182, 1269, 1292, 1823
SatI GCNGC 1 cut(s) 1836
Sau3AI GATC 6 cut(s) 168, 282, 337, 345, 676, 1384
Sau96I GGNCC 4 cut(s) 156, 161, 398, 1046
SchI GAGTC 5 cut(s) 269, 410, 572, 777, 1250
ScrFI CCNGG 3 cut(s) 72, 79, 456
SduI GDGCHC 1 cut(s) 1288
SfaNI GCATC 3 cut(s) 491, 530, 1822
SfcI CTRYAG 1 cut(s) 1710
SfuI TTCGAA 2 cut(s) 462, 912
SinI GGWCC 2 cut(s) 156, 398
SmiMI CAYNNNNRTG 5 cut(s) 290, 526, 605, 1765, 1852
Sse9I AATT 8 cut(s) 179, 350, 631, 1006, 1371, 1414, 1645, 1778
SsiI CCGC 4 cut(s) 22, 116, 154, 515
SspI AATATT 4 cut(s) 315, 820, 878, 1458
SspMI CTAG 4 cut(s) 477, 1332, 1452, 1589
StyD4I CCNGG 3 cut(s) 70, 77, 454
StyI CCWWGG 3 cut(s) 105, 164, 1117
TaaI ACNGT 3 cut(s) 393, 413, 1545
TaiI ACGT 3 cut(s) 449, 1495, 1566
TaqI TCGA 5 cut(s) 462, 766, 771, 912, 1311
TaqII GACCGA 1 cut(s) 888
TasI AATT 8 cut(s) 179, 350, 631, 1006, 1371, 1414, 1645, 1778
TatI WGTACW 1 cut(s) 86
TfiI GAWTC 6 cut(s) 305, 464, 1219, 1358, 1703, 1718
Tru1I TTAA 5 cut(s) 1134, 1182, 1269, 1292, 1823
Tru9I TTAA 5 cut(s) 1134, 1182, 1269, 1292, 1823
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 3 cut(s) 413, 700, 1518
TseI GCWGC 1 cut(s) 1835
Tsp45I GTSAC 3 cut(s) 413, 700, 1518
TspRI CASTG 1 cut(s) 398
VpaK11BI GGWCC 2 cut(s) 156, 398
XapI RAATTY 3 cut(s) 350, 1645, 1778
XceI RCATGY 2 cut(s) 531, 1661
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 4 cut(s) 477, 1332, 1452, 1589
Zsp2I ATGCAT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.