MD05G1332300.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45592944 .. 45596256
3313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1332300.v1.1.491

Sequence Viewer

Length: 2529 bp
ATGAATTTTCTGAAAGGTCTGCTAAATGTTTTAGTTCTTCAGCACCTCCTTCTGCAGCTCTGCTCTTCCTTGGACACCATAAAATTTGATCAACCCGTCGGAGACGGTGATTTCTTGGTGTCCAAGAACGAGACCTTTGTCCTGGGATTCTTTAGTCCCGGGATATCTACCAACCGCTATGTCGGAATTTGGTACAAATTTTCGGAAGACTTGGTTGTGTGGGTGGCCAACAGAGATAATCCCATCAATGGCAGCTCAGGAGTTCTCTCAATAGGTTCTGATGGAAACCTAGTGCTGCAAGCCAATACTAGCCAAGGCCTTGTGCCTCTGTGGTCAACAAATGTTTCGATATCATCAGCGAGCAACGGTAATATTTCTGCGCAAATTCTTGATTCAGGAAGCCTTGTTTTGGCTCAACAAGGCAGCCAGGATGTTTTTTGGCAGAGTACTGATCACCCTACAAATATTCTTCTTTCGAATATGAAAATCGGGTTGGACAGAAGAAGTGGCATAAACCGGTTCCTCACGTGTTGGAACTCGGACAATGATCCTGGGACGGGAAATGTTTCGTTGAGAATGGAACCGAATGGATCGCCTCAGTTGATCTTGTACAAGGATGATGCTAAGTCGTGGAGGTCAGGACAGTGGAACGGGATTCAATGGGGCGGCATACCTGCCGTGCAGCGGAACGTTGTGTTTAAGATCAATTTTGTGAACAACCAAGATGAAATTGCTGTGCAGTGGACTGTTCTCGACCCTTCAATTTACTCGGTGATCACAATAGACTGGTCGGGAACACTCAACCAGCTATCATGGCAGGACCAGCAGCACCAGTGGGTTTCACTTTGGTCGGCACCATTGGATGCCTGTGACAGCTATGGCAAGTGTGGTCAATTTGGCAATTGCAATCCTTACACCAACAGTGGGTTCAACTGCACATGCTACCCCGGATATGAACCAACCTCACCGCAGGATTGGGATTTAAGAGATGGGACAGATGGGTGCAAGAGGCCGCAGGACTCGCTGTCCATGTGCAGGAACGGCGAGGGTTTTGTGAAGATGAAAAATGTAAAGGTTCCAGACACGTCCTCTATAAAATTGGAGAATAATTTGAGCATAGTAGCGTGCGAGGAGGAGTGCTTGAAGAACTGCTCGTGCTTGGCATACGCGAGTGCAGATGTGAGGAATGGAGGGACTGGATGCATGACATGGTATAGAGATTTGATGGATACTAAGCAGTTCACAGAAGGCGGGCAAGATTTGTACATTCGCGTTGATGCAGTTGTTTTAGCTCAGTATAAAAACAAGTCAGGAGGAGGGTATTTTTCCGGGAGAAGGCGACTGGCTATTATATTGGTAGTGTCAATTTCTGTCCCCTCATTGCTCATCCTCGCAGTTCTATGCTGGTTCGGGAAAAGGAGCAGGAAAGGGAGAGGAGGAGAACCCAGATTTCTGAACGATCCCGCTGCTTCTGGTGTACGAAGCTATGAAGATTTGCCAATAAAAAATGAGGTTGATGAACACAGAGGAGACACAGATTTACCTTTTTTCGATTTAACCACTGTGGTTGCAGCCACAGAAAACTTCTCTTCTGCTAACAAGCTTGGACACGGCGGCTTCGGCACGGTATATAAGGGATGTCTAGCTGATGGACAGGACATAGCTGTCAAAAGATTATCGAGAAATTCAGGACAAGGCGTAGATGAATTCAAGAACGAAGTAATGCTTATAGCAAAGCTTCAGCATAGAAATCTTGTGAGGCTTTTGGGTTGGTGCATACATAAAGAAGAGAGGATGCTAATCTATGAATACATGCCGAATCGCAGCTTGGACTTATGCATTTTCGATAAAAACAGAAAGTCGTTGTTAGATTGGAGAAAAAGATTTCAAATTATCATTGGGATTGCTCGAGGCGTCCTATATCTTCATCAAGATTCGAGACTAAAAATAATCCACAGGGATTTGAAAGCAAGCAATGTTTTACTGGATGGTTCAATGAACCCAAAAATATCAGATTTTGGCATGGCAAGAATGTTCGGGGATGACCAAATTGAAGCAAACACGAATAGAGTTGTTGGCACCTACGGTTACATGTCACCGGAGTATGCTATGGATGGGCTATATTCCACAAAATCCGATGTGTTTAGCTTCGGAGTCTTGGCACTAGAGATCATTAGTGGCAGAAAGAACAGTTTCCAATTCGAAAACACCTCTCTGAATTTGGTTGGACTTATATGGGACTTGTGGACAGAAGGAAAAGTCTTGGACATAATTGATTCATCACTGAACCAGTCGTATTCGACTCATGAAGTTATGAGATGCATTCAGATTGGGCTCTTGTGCGTGCAAGAAAATGCAACAGACCGGCCAACCATGCTAGATGTTGTGTTCATGCTGGGGAATGAAACGAATCTTCCACATCCAAAAAAGGCAGCGTTTAGCTTCAAAACCGGCGGTCCAGATTCTTCAATGTCTAGAGGAGCTTCCTCTGTAAATGATATAACAGTAACAGTTATTGAAGCTCGTTGA

Protein Analysis

843

Amino Acids

93.53

Weight (kDa)

5.88

Isoelectric Point (pI)

38.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 178 3.3e-29 D-mannose binding lectin
S_locus_glycop PF00954 211 - 321 4.1e-26 S-locus glycoprotein domain
PAN_2 PF08276 345 - 411 3.7e-20 PAN-like domain
Pkinase PF00069 530 - 793 5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 532 - 796 2.2e-47 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 801 - 842 6.3e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1664
Acc16I TGCGCA 1 cut(s) 381
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 2 cut(s) 853, 2078
AccII CGCG 2 cut(s) 1169, 1272
AciI CCGC 9 cut(s) 175, 666, 685, 968, 1013, 1251, 1464, 1614, 2454
AclI AACGTT 1 cut(s) 690
AclWI GGATC 3 cut(s) 542, 598, 1454
AcoI YGGCCR 2 cut(s) 225, 2366
AcsI RAATTY 8 cut(s) 4, 83, 186, 197, 384, 1684, 1706, 2218
AcuI CTGAAG 2 cut(s) 23, 1724
AcvI CACGTG 1 cut(s) 528
AcyI GRCGYC 1 cut(s) 1914
AfaI GTAC 5 cut(s) 194, 448, 611, 1265, 1479
AfiI CCNNNNNNNGG 7 cut(s) 248, 409, 557, 684, 924, 1035, 1335
AflIII ACRYGT 3 cut(s) 527, 1083, 2091
AgeI ACCGGT 1 cut(s) 516
AhdI GACNNNNNGTC 1 cut(s) 1024
AjiI CACGTC 1 cut(s) 1086
AjnI CCWGG 3 cut(s) 141, 426, 550
AjuI GAANNNNNNNTTGG 6 cut(s) 476, 508, 911, 943, 1811, 1843
Alw26I GTCTC 4 cut(s) 96, 125, 1524, 1933
AlwI GGATC 3 cut(s) 542, 598, 1454
Ama87I CYCGRG 2 cut(s) 158, 1908
AoxI GGCC 4 cut(s) 225, 316, 1010, 2366
ApoI RAATTY 8 cut(s) 4, 83, 186, 197, 384, 1684, 1706, 2218
AsiGI ACCGGT 1 cut(s) 516
Asp700I GAANNNNTTC 2 cut(s) 565, 2192
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 2 cut(s) 820, 2456
AsuC2I CCSGG 4 cut(s) 159, 160, 948, 1330
AsuHPI GGTGA 5 cut(s) 119, 446, 784, 957, 2088
AsuII TTCGAA 2 cut(s) 476, 2202
AvaI CYCGRG 2 cut(s) 158, 1908
AvaII GGWCC 2 cut(s) 820, 2456
BalI TGGCCA 1 cut(s) 227
BanI GGYRCC 2 cut(s) 853, 2078
BanII GRGCYC 1 cut(s) 2337
BauI CACGAG 1 cut(s) 1153
BbrPI CACGTG 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 213
BccI CCATC 8 cut(s) 251, 275, 983, 992, 1219, 1643, 1982, 2108
BceAI ACGGC 3 cut(s) 662, 1057, 1627
BcgI CGANNNNNNTGC 2 cut(s) 1448, 1482
BciT130I CCWGG 3 cut(s) 143, 428, 552
BciVI GTATCC 1 cut(s) 1222
BclI TGATCA 3 cut(s) 88, 451, 774
BcnI CCSGG 4 cut(s) 159, 160, 948, 1330
BcoDI GTCTC 4 cut(s) 96, 125, 1524, 1933
BfaI CTAG 6 cut(s) 290, 309, 1643, 2165, 2378, 2475
BfmI CTRYAG 1 cut(s) 53
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 1 cut(s) 1222
BmcAI AGTACT 1 cut(s) 448
Bme1390I CCNGG 7 cut(s) 143, 159, 160, 428, 552, 948, 1330
Bme18I GGWCC 2 cut(s) 820, 2456
BmeRI GACNNNNNGTC 1 cut(s) 1024
BmeT110I CYCGRG 2 cut(s) 158, 1908
BmgBI CACGTC 1 cut(s) 1086
BmgT120I GGNCC 2 cut(s) 820, 2456
BmiI GGNNCC 5 cut(s) 521, 582, 855, 1077, 2080
BmrFI CCNGG 7 cut(s) 143, 159, 160, 428, 552, 948, 1330
BmsI GCATC 6 cut(s) 610, 853, 1190, 1267, 1785, 2309
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 213
Bpu10I CCTNAGC 1 cut(s) 256
Bpu14I TTCGAA 2 cut(s) 476, 2202
BpuMI CCSGG 4 cut(s) 159, 160, 948, 1330
BsaAI YACGTR 1 cut(s) 528
BsaBI GATNNNNATC 1 cut(s) 1799
BsaHI GRCGYC 1 cut(s) 1914
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 6 cut(s) 69, 142, 158, 313, 551, 946
BsaWI WCCGGW 2 cut(s) 516, 2098
Bsc4I CCNNNNNNNGG 7 cut(s) 248, 409, 557, 684, 924, 1035, 1335
Bse118I RCCGGY 3 cut(s) 516, 2364, 2450
Bse1I ACTGG 6 cut(s) 791, 832, 1201, 1347, 1989, 2290
Bse3DI GCAATG 2 cut(s) 1379, 1981
Bse8I GATNNNNATC 1 cut(s) 1799
BseBI CCWGG 3 cut(s) 143, 428, 552
BseDI CCNNGG 6 cut(s) 69, 142, 158, 313, 551, 946
BseJI GATNNNNATC 1 cut(s) 1799
BseLI CCNNNNNNNGG 7 cut(s) 248, 409, 557, 684, 924, 1035, 1335
BseMI GCAATG 2 cut(s) 1379, 1981
BseMII CTCAG 3 cut(s) 270, 611, 1307
BseNI ACTGG 6 cut(s) 791, 832, 1201, 1347, 1989, 2290
BseRI GAGGAG 7 cut(s) 1145, 1148, 1329, 1449, 1452, 1542, 2493
BseYI CCCAGC 1 cut(s) 2395
BsgI GTGCAG 5 cut(s) 701, 758, 919, 1054, 1194
Bsh1236I CGCG 2 cut(s) 1169, 1272
BshFI GGCC 4 cut(s) 227, 318, 1012, 2368
BshNI GGYRCC 2 cut(s) 853, 2078
BshTI ACCGGT 1 cut(s) 516
BsiHKCI CYCGRG 2 cut(s) 158, 1908
BsiSI CCGG 7 cut(s) 159, 517, 948, 1329, 2099, 2365, 2451
BslFI GGGAC 6 cut(s) 141, 568, 1006, 1207, 1358, 2252
BslI CCNNNNNNNGG 7 cut(s) 248, 409, 557, 684, 924, 1035, 1335
BsmAI GTCTC 4 cut(s) 96, 125, 1524, 1933
BsmBI CGTCTC 1 cut(s) 96
BsmFI GGGAC 6 cut(s) 141, 568, 1006, 1207, 1358, 2252
BsmI GAATGC 1 cut(s) 2322
BsnI GGCC 4 cut(s) 227, 318, 1012, 2368
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 2 cut(s) 158, 1908
Bsp119I TTCGAA 2 cut(s) 476, 2202
Bsp1286I GDGCHC 1 cut(s) 2337
Bsp1407I TGTACA 2 cut(s) 609, 1263
Bsp143I GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
BspACI CCGC 9 cut(s) 175, 666, 685, 968, 1013, 1251, 1464, 1614, 2454
BspANI GGCC 4 cut(s) 227, 318, 1012, 2368
BspCNI CTCAG 3 cut(s) 269, 610, 1306
BspFNI CGCG 2 cut(s) 1169, 1272
BspHI TCATGA 1 cut(s) 2305
BspLI GGNNCC 5 cut(s) 521, 582, 855, 1077, 2080
BspMAI CTGCAG 1 cut(s) 57
BspMI ACCTGC 1 cut(s) 682
BspPI GGATC 3 cut(s) 542, 598, 1454
BspQI GCTCTTC 1 cut(s) 70
BspT104I TTCGAA 2 cut(s) 476, 2202
BspT107I GGYRCC 2 cut(s) 853, 2078
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 2 cut(s) 1379, 1981
BsrFI RCCGGY 3 cut(s) 516, 2364, 2450
BsrGI TGTACA 2 cut(s) 609, 1263
BsrI ACTGG 6 cut(s) 791, 832, 1201, 1347, 1989, 2290
BssAI RCCGGY 3 cut(s) 516, 2364, 2450
BssECI CCNNGG 6 cut(s) 69, 142, 158, 313, 551, 946
BssMI GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
BssNI GRCGYC 1 cut(s) 1914
BssSI CACGAG 1 cut(s) 1153
BssT1I CCWWGG 2 cut(s) 69, 313
Bst2BI CACGAG 1 cut(s) 1153
Bst2UI CCWGG 3 cut(s) 143, 428, 552
Bst6I CTCTTC 3 cut(s) 70, 1594, 1782
BstACI GRCGYC 1 cut(s) 1914
BstAUI TGTACA 2 cut(s) 609, 1263
BstBAI YACGTR 1 cut(s) 528
BstBI TTCGAA 2 cut(s) 476, 2202
BstC8I GCNNGC 6 cut(s) 300, 361, 1126, 1253, 1972, 2345
BstDEI CTNAG 5 cut(s) 256, 597, 624, 1233, 1293
BstFNI CGCG 2 cut(s) 1169, 1272
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 9 cut(s) 91, 454, 550, 593, 606, 705, 777, 1462, 2172
BstMAI GTCTC 4 cut(s) 96, 125, 1524, 1933
BstMBI GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
BstMWI GCNNNNNNNGC 6 cut(s) 814, 823, 1021, 1041, 1620, 2374
BstNI CCWGG 3 cut(s) 143, 428, 552
BstNSI RCATGY 3 cut(s) 942, 1816, 2095
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 7 cut(s) 141, 157, 158, 426, 550, 946, 1328
BstSFI CTRYAG 1 cut(s) 53
BstUI CGCG 2 cut(s) 1169, 1272
BstV2I GAAGAC 1 cut(s) 213
BsuI GTATCC 1 cut(s) 1222
BsuRI GGCC 4 cut(s) 227, 318, 1012, 2368
BtrI CACGTC 1 cut(s) 1086
BtsI GCAGTG 1 cut(s) 746
BtsIMutI CAGTG 6 cut(s) 650, 746, 839, 928, 1560, 2282
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 6 cut(s) 300, 361, 1126, 1253, 1972, 2345
CciI TCATGA 1 cut(s) 2305
CfoI GCGC 1 cut(s) 382
Cfr10I RCCGGY 3 cut(s) 516, 2364, 2450
Cfr13I GGNCC 2 cut(s) 820, 2456
Cfr9I CCCGGG 1 cut(s) 158
CseI GACGC 1 cut(s) 1903
Csp6I GTAC 5 cut(s) 193, 447, 610, 1264, 1478
CspAI ACCGGT 1 cut(s) 516
CspCI CAANNNNNGTGG 2 cut(s) 1549, 1584
CviQI GTAC 5 cut(s) 193, 447, 610, 1264, 1478
DdeI CTNAG 5 cut(s) 256, 597, 624, 1233, 1293
DpnI GATC 9 cut(s) 90, 453, 549, 592, 605, 704, 776, 1461, 2171
DpnII GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
DrdI GACNNNNNNGTC 1 cut(s) 1664
DriI GACNNNNNGTC 1 cut(s) 1024
DseDI GACNNNNNNGTC 1 cut(s) 1664
EaeI YGGCCR 2 cut(s) 225, 2366
Eam1104I CTCTTC 3 cut(s) 70, 1594, 1782
Eam1105I GACNNNNNGTC 1 cut(s) 1024
EarI CTCTTC 3 cut(s) 70, 1594, 1782
Eco130I CCWWGG 2 cut(s) 69, 313
Eco147I AGGCCT 1 cut(s) 318
Eco24I GRGCYC 1 cut(s) 2337
Eco31I GGTCTC 1 cut(s) 125
Eco32I GATATC 2 cut(s) 165, 351
Eco47I GGWCC 2 cut(s) 820, 2456
Eco57I CTGAAG 2 cut(s) 23, 1724
Eco72I CACGTG 1 cut(s) 528
Eco88I CYCGRG 2 cut(s) 158, 1908
EcoRI GAATTC 1 cut(s) 1706
EcoRII CCWGG 3 cut(s) 141, 426, 550
EcoRV GATATC 2 cut(s) 165, 351
EcoT14I CCWWGG 2 cut(s) 69, 313
EcoT22I ATGCAT 3 cut(s) 1205, 1841, 2324
EcoT38I GRGCYC 1 cut(s) 2337
ErhI CCWWGG 2 cut(s) 69, 313
Esp3I CGTCTC 1 cut(s) 96
FalI AAGNNNNNCTT 2 cut(s) 1710, 1742
FaqI GGGAC 6 cut(s) 141, 568, 1006, 1207, 1358, 2252
FauI CCCGC 2 cut(s) 1244, 1471
FbaI TGATCA 3 cut(s) 88, 451, 774
FriOI GRGCYC 1 cut(s) 2337
FspBI CTAG 6 cut(s) 290, 309, 1643, 2165, 2378, 2475
FspI TGCGCA 1 cut(s) 381
GlaI GCGC 1 cut(s) 381
GsaI CCCAGC 1 cut(s) 2399
HaeIII GGCC 4 cut(s) 227, 318, 1012, 2368
HapII CCGG 7 cut(s) 159, 517, 948, 1329, 2099, 2365, 2451
HgaI GACGC 1 cut(s) 1903
HhaI GCGC 1 cut(s) 382
Hin1I GRCGYC 1 cut(s) 1914
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HindIII AAGCTT 2 cut(s) 1601, 1736
HpaII CCGG 7 cut(s) 159, 517, 948, 1329, 2099, 2365, 2451
HphI GGTGA 5 cut(s) 119, 446, 784, 957, 2088
Hpy166II GTNNAC 6 cut(s) 336, 715, 744, 1242, 1478, 2247
Hpy8I GTNNAC 6 cut(s) 336, 715, 744, 1242, 1478, 2247
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 5 cut(s) 59, 768, 1241, 1329, 2246
HpyCH4IV ACGT 3 cut(s) 527, 690, 1085
HpyF10VI GCNNNNNNNGC 6 cut(s) 814, 823, 1021, 1041, 1620, 2374
HpyF3I CTNAG 5 cut(s) 256, 597, 624, 1233, 1293
HpySE526I ACGT 3 cut(s) 527, 690, 1085
Hsp92I GRCGYC 1 cut(s) 1914
HspAI GCGC 1 cut(s) 380
Ksp22I TGATCA 3 cut(s) 88, 451, 774
Kzo9I GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 2 cut(s) 1419, 2480
LweI GCATC 6 cut(s) 610, 853, 1190, 1267, 1785, 2309
MaeI CTAG 6 cut(s) 290, 309, 1643, 2165, 2378, 2475
MaeII ACGT 3 cut(s) 527, 690, 1085
MaeIII GTNAC 4 cut(s) 869, 2087, 2094, 2506
MalI GATC 9 cut(s) 90, 453, 549, 592, 605, 704, 776, 1461, 2171
MboI GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
MfeI CAATTG 1 cut(s) 901
MhlI GDGCHC 1 cut(s) 2337
MlsI TGGCCA 1 cut(s) 227
MluNI TGGCCA 1 cut(s) 227
MlyI GAGTC 3 cut(s) 1013, 2163, 2296
MmeI TCCRAC 5 cut(s) 79, 163, 474, 512, 2206
Mox20I TGGCCA 1 cut(s) 227
Mph1103I ATGCAT 3 cut(s) 1205, 1841, 2324
MroXI GAANNNNTTC 2 cut(s) 565, 2192
MscI TGGCCA 1 cut(s) 227
MseI TTAA 3 cut(s) 699, 983, 1556
Msp20I TGGCCA 1 cut(s) 227
MspA1I CMGCKG 2 cut(s) 685, 1466
MspI CCGG 7 cut(s) 159, 517, 948, 1329, 2099, 2365, 2451
MspR9I CCNGG 7 cut(s) 143, 159, 160, 428, 552, 948, 1330
MunI CAATTG 1 cut(s) 901
Mva1269I GAATGC 1 cut(s) 2322
MvaI CCWGG 3 cut(s) 143, 428, 552
MvnI CGCG 2 cut(s) 1169, 1272
MwoI GCNNNNNNNGC 6 cut(s) 814, 823, 1021, 1041, 1620, 2374
NciI CCSGG 4 cut(s) 159, 160, 948, 1330
NdeII GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
NlaIV GGNNCC 5 cut(s) 521, 582, 855, 1077, 2080
NmuCI GTSAC 2 cut(s) 869, 2094
NsbI TGCGCA 1 cut(s) 381
NsiI ATGCAT 3 cut(s) 1205, 1841, 2324
NspI RCATGY 3 cut(s) 942, 1816, 2095
NspV TTCGAA 2 cut(s) 476, 2202
PaeR7I CTCGAG 1 cut(s) 1908
PagI TCATGA 1 cut(s) 2305
PceI AGGCCT 1 cut(s) 318
PciI ACATGT 1 cut(s) 2091
PciSI GCTCTTC 1 cut(s) 70
PctI GAATGC 1 cut(s) 2322
PdmI GAANNNNTTC 2 cut(s) 565, 2192
PfeI GAWTC 8 cut(s) 147, 392, 655, 1819, 1934, 2276, 2410, 2462
PfoI TCCNGGA 1 cut(s) 1328
PinAI ACCGGT 1 cut(s) 516
PleI GAGTC 3 cut(s) 1013, 2162, 2296
PmaCI CACGTG 1 cut(s) 528
PmlI CACGTG 1 cut(s) 528
PpsI GAGTC 3 cut(s) 1013, 2162, 2296
Ppu21I YACGTR 1 cut(s) 528
PscI ACATGT 1 cut(s) 2091
PshAI GACNNNNGTC 1 cut(s) 137
Psp1406I AACGTT 1 cut(s) 690
Psp6I CCWGG 3 cut(s) 141, 426, 550
PspCI CACGTG 1 cut(s) 528
PspFI CCCAGC 1 cut(s) 2395
PspGI CCWGG 3 cut(s) 141, 426, 550
PspN4I GGNNCC 5 cut(s) 521, 582, 855, 1077, 2080
PspPI GGNCC 2 cut(s) 820, 2456
PspXI VCTCGAGB 1 cut(s) 1908
PstI CTGCAG 1 cut(s) 57
RsaI GTAC 5 cut(s) 194, 448, 611, 1265, 1479
RsaNI GTAC 5 cut(s) 193, 447, 610, 1264, 1478
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 3 cut(s) 699, 983, 1556
Sau3AI GATC 9 cut(s) 88, 451, 547, 590, 603, 702, 774, 1459, 2169
Sau96I GGNCC 2 cut(s) 820, 2456
ScaI AGTACT 1 cut(s) 448
SchI GAGTC 3 cut(s) 1013, 2163, 2296
ScrFI CCNGG 7 cut(s) 143, 159, 160, 428, 552, 948, 1330
SduI GDGCHC 1 cut(s) 2337
SfaNI GCATC 6 cut(s) 610, 853, 1190, 1267, 1785, 2309
SfcI CTRYAG 1 cut(s) 53
Sfr274I CTCGAG 1 cut(s) 1908
SfuI TTCGAA 2 cut(s) 476, 2202
SinI GGWCC 2 cut(s) 820, 2456
SlaI CTCGAG 1 cut(s) 1908
SmaI CCCGGG 1 cut(s) 160
SmlI CTYRAG 1 cut(s) 1908
SmoI CTYRAG 1 cut(s) 1908
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 9 cut(s) 175, 666, 685, 968, 1013, 1251, 1464, 1614, 2454
SspI AATATT 2 cut(s) 373, 466
SspMI CTAG 6 cut(s) 290, 309, 1643, 2165, 2378, 2475
StuI AGGCCT 1 cut(s) 318
StyD4I CCNGG 7 cut(s) 141, 157, 158, 426, 550, 946, 1328
StyI CCWWGG 2 cut(s) 69, 313
TaiI ACGT 3 cut(s) 530, 693, 1088
TatI WGTACW 3 cut(s) 446, 609, 1263
TauI GCSGC 3 cut(s) 669, 1015, 1617
TfiI GAWTC 8 cut(s) 147, 392, 655, 1819, 1934, 2276, 2410, 2462
Tru1I TTAA 3 cut(s) 699, 983, 1556
Tru9I TTAA 3 cut(s) 699, 983, 1556
TscAI CASTG 6 cut(s) 650, 746, 839, 928, 1567, 2289
TseFI GTSAC 2 cut(s) 869, 2094
Tsp45I GTSAC 2 cut(s) 869, 2094
TspMI CCCGGG 1 cut(s) 158
TspRI CASTG 6 cut(s) 650, 746, 839, 928, 1567, 2289
VpaK11BI GGWCC 2 cut(s) 820, 2456
XapI RAATTY 8 cut(s) 4, 83, 186, 197, 384, 1684, 1706, 2218
XbaI TCTAGA 1 cut(s) 2474
XceI RCATGY 3 cut(s) 942, 1816, 2095
XhoI CTCGAG 1 cut(s) 1908
XmaI CCCGGG 1 cut(s) 158
XmnI GAANNNNTTC 2 cut(s) 565, 2192
XspI CTAG 6 cut(s) 290, 309, 1643, 2165, 2378, 2475
ZrmI AGTACT 1 cut(s) 448
Zsp2I ATGCAT 3 cut(s) 1205, 1841, 2324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.