RchiOBHm_Chr5g0035821

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
29850711 .. 29854926
4216 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31466

Sequence Viewer

Length: 2352 bp
ATGAGTTTCAGTATCGAAGCGTTTATCCAGATATTGCTTGTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTCCCCTTGACGCCCTTACGCCAGACCGTCCCATCAGAGACGGCGATGTTTTAGTCTCTAACAAGCAAATCTTTGCACTAGGGTTCTTCAGCCTTGGAAATTCTCAGCACCGCTACGCAGGAGTTTGGTATAACAAGATTCCAGAGAAAGCCTTTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAACGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAACTATCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCAAACAATTTCACAGCGAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTGCCCCTCAGATACACTGCTTCCCTCTATGAAGATTGGGCTAAACCGGCGGTCCGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAACCGGGAGTTGTACATGTGGGATAAACCCGATGGGGGTTCTGCAGTTGTTTCTGCGCAAGGGTAGAGAAGCATTGTGGCGGGGCGGCCCTTGGACTGGGCACAGATTGAGCGGTACCGCTGGAGACTACAATTCAAGTATTGTCAACAATGAAGACGAGATATCCTTCGCGTATTTGGACTCAGAGATCACAAGGATGGTGATAGATGAATCAGGAATACTTGAAGGGTTCACGTGGAAGGATCAATGGATCAAATTCTACTCCTACCCAACTGGGTGGTGTGATTCCTACGGACAGTGCGGTCCAAATACTAACTGTGACCCAGCCAAGGACTATAAGTTGTCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTAGATTGAGTCTTGGTGAAGGTGGGTGCATTAGGAAAGCAGAAGCCTCCACATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGAGTGTAAAACTACCGGACTCGTCTACGGCACGTGTGAACATGAGCATGAGTTTGGAAATGTGCAGACAAAAGTGCTTGATGGATTGTTCTTGCACAGCATACACGAGTGCGGACGACCGGGGCGGTGGGATCGGGTGTATGACATGGCACGGGGACTTGATGGACACGAGGATTTTCTACGATGTTGGTCAAGATTTATATGTTCGAGTCGATGCAACTTCTGTAGGTATGCGTAGGCAAAATAAATATTCATTTGACCTTACTGCTGGGTTAACCTACTTCGAAGAAGCTACTGGTGGATTAGTTCCTGATGATAGTAGAATAAACTCGGAGTTACTATTATTTCATCTAAACACCGTAGCCACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCTGTTTATAAGGGGATACTTTACGATGGAAAAGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTACCAAACAAAAGTTTGGATTGTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGGTTATTATACCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTAGCAAAAAGAATGCTGGTTCCTATGAGAAGTATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCCGTGGAAATCATTGATTCATCTATAGGTGAATGTTACCTTGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGCAGTCGTTTCAATGTTAAATAATGATGCAGCTCTTCCTTCACCGAGACGACCCGCATTTTTACTGAAGACAATGAGTCCTAGTGGAGACTCATCCAGCAACAGAGAAGTTTGTTCGGTAAACGGTGTCACATGTACAATTGTAGAAGCTCGCTAA

Protein Analysis

783

Amino Acids

86.91

Weight (kDa)

5.62

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 179 1.1e-31 D-mannose binding lectin
S_locus_glycop PF00954 211 - 310 8.1e-17 S-locus glycoprotein domain
PAN_2 PF08276 330 - 396 7.3e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 468 - 737 3.9e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 468 - 670 4.4e-42 Protein kinase domain
DUF3403 PF11883 739 - 783 3.5e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1446
AasI GACNNNNNNGTC 2 cut(s) 254, 855
Acc16I TGCGCA 1 cut(s) 611
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 1 cut(s) 668
AccBSI CCGCTC 1 cut(s) 666
AccI GTMKAC 1 cut(s) 1043
AccII CGCG 1 cut(s) 725
AclI AACGTT 1 cut(s) 348
AclWI GGATC 3 cut(s) 804, 812, 1157
AcoI YGGCCR 2 cut(s) 1504, 2183
AcsI RAATTY 4 cut(s) 172, 809, 2035, 2168
AcuI CTGAAG 3 cut(s) 145, 1887, 2282
AcvI CACGTG 3 cut(s) 789, 906, 1052
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 3 cut(s) 568, 670, 2332
AfiI CCNNNNNNNGG 5 cut(s) 231, 557, 589, 650, 883
AflIII ACRYGT 5 cut(s) 569, 986, 1051, 2047, 2327
AhdI GACNNNNNGTC 1 cut(s) 2271
AjnI CCWGG 1 cut(s) 913
AjuI GAANNNNNNNTTGG 4 cut(s) 1401, 1416, 1433, 1448
AleI CACNNNNGTG 1 cut(s) 2155
AluBI AGCT 6 cut(s) 73, 385, 1310, 1417, 2228, 2345
AluI AGCT 6 cut(s) 73, 385, 1310, 1417, 2228, 2345
Alw21I GWGCWC 1 cut(s) 1678
Alw26I GTCTC 6 cut(s) 105, 133, 240, 672, 2236, 2277
AlwI GGATC 3 cut(s) 804, 812, 1157
Ama87I CYCGRG 1 cut(s) 550
AoxI GGCC 5 cut(s) 298, 640, 1504, 1782, 2183
ApeKI GCWGC 1 cut(s) 2225
ApoI RAATTY 4 cut(s) 172, 809, 2035, 2168
Asp700I GAANNNNTTC 1 cut(s) 1536
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 5 cut(s) 319, 339, 504, 641, 857
AsuC2I CCSGG 5 cut(s) 508, 551, 552, 559, 1139
AsuHPI GGTGA 8 cut(s) 302, 354, 766, 924, 962, 1902, 2117, 2229
AsuII TTCGAA 2 cut(s) 921, 1302
AvaI CYCGRG 1 cut(s) 550
AvaII GGWCC 4 cut(s) 319, 339, 504, 857
BaeGI GKGCMC 1 cut(s) 657
BalI TGGCCA 1 cut(s) 1506
BanI GGYRCC 1 cut(s) 668
BauI CACGAG 2 cut(s) 1123, 1186
BbrPI CACGTG 3 cut(s) 789, 906, 1052
BbsI GAAGAC 3 cut(s) 34, 714, 2270
Bbv12I GWGCWC 1 cut(s) 1678
BbvI GCAGC 1 cut(s) 2237
BccI CCATC 7 cut(s) 113, 287, 580, 745, 1093, 1174, 1457
BceAI ACGGC 4 cut(s) 130, 1062, 1463, 2063
BcgI CGANNNNNNTGC 2 cut(s) 2128, 2162
BciT130I CCWGG 1 cut(s) 915
BciVI GTATCC 3 cut(s) 385, 1446, 2034
BcnI CCSGG 5 cut(s) 508, 551, 552, 559, 1139
BcoDI GTCTC 6 cut(s) 105, 133, 240, 672, 2236, 2277
BfaI CTAG 8 cut(s) 60, 152, 936, 1722, 1842, 1979, 1992, 2277
BfmI CTRYAG 3 cut(s) 596, 1242, 2100
BfuI GTATCC 3 cut(s) 385, 1446, 2034
BglII AGATCT 1 cut(s) 1774
BisI GCNGC 2 cut(s) 640, 2226
BlsI GCNGC 2 cut(s) 641, 2227
Bme1390I CCNGG 6 cut(s) 508, 551, 552, 559, 915, 1139
Bme18I GGWCC 4 cut(s) 319, 339, 504, 857
BmeRI GACNNNNNGTC 1 cut(s) 2271
BmeT110I CYCGRG 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 319, 339, 504, 641, 857
BmiI GGNNCC 4 cut(s) 321, 556, 670, 2011
BmrFI CCNGG 6 cut(s) 508, 551, 552, 559, 915, 1139
BmrI ACTGGG 3 cut(s) 248, 660, 837
BmsI GCATC 2 cut(s) 1222, 2212
BmuI ACTGGG 3 cut(s) 248, 660, 837
BpiI GAAGAC 3 cut(s) 34, 714, 2270
BpmI CTGGAG 1 cut(s) 696
Bpu14I TTCGAA 2 cut(s) 921, 1302
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 5 cut(s) 508, 551, 552, 559, 1139
Bsa29I ATCGAT 1 cut(s) 281
BsaAI YACGTR 3 cut(s) 789, 906, 1052
BsaBI GATNNNNATC 1 cut(s) 1613
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 8 cut(s) 166, 550, 644, 882, 914, 1138, 1507, 2079
BsaWI WCCGGW 2 cut(s) 1033, 1912
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 1385, 1415
Bsc4I CCNNNNNNNGG 5 cut(s) 231, 557, 589, 650, 883
Bse118I RCCGGY 2 cut(s) 498, 2181
Bse1I ACTGG 4 cut(s) 254, 655, 832, 1318
Bse3DI GCAATG 2 cut(s) 1795, 1929
Bse8I GATNNNNATC 1 cut(s) 1613
BseBI CCWGG 1 cut(s) 915
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 8 cut(s) 166, 550, 644, 882, 914, 1138, 1507, 2079
BseGI GGATG 2 cut(s) 756, 2288
BseJI GATNNNNATC 1 cut(s) 1613
BseLI CCNNNNNNNGG 5 cut(s) 231, 557, 589, 650, 883
BseMI GCAATG 2 cut(s) 1795, 1929
BseMII CTCAG 3 cut(s) 191, 474, 750
BseNI ACTGG 4 cut(s) 254, 655, 832, 1318
BseSI GKGCMC 1 cut(s) 657
BseXI GCAGC 1 cut(s) 2237
BseYI CCCAGC 2 cut(s) 877, 1286
BsgI GTGCAG 1 cut(s) 1102
Bsh1236I CGCG 1 cut(s) 725
Bsh1285I CGRYCG 1 cut(s) 1138
BshFI GGCC 5 cut(s) 300, 642, 1506, 1784, 2185
BshNI GGYRCC 1 cut(s) 668
BshVI ATCGAT 1 cut(s) 281
BsiEI CGRYCG 1 cut(s) 1138
BsiHKAI GWGCWC 1 cut(s) 1678
BsiHKCI CYCGRG 1 cut(s) 550
BsiSI CCGG 8 cut(s) 499, 507, 551, 558, 1034, 1138, 1913, 2182
BslFI GGGAC 2 cut(s) 87, 1187
BslI CCNNNNNNNGG 5 cut(s) 231, 557, 589, 650, 883
BsmAI GTCTC 6 cut(s) 105, 133, 240, 672, 2236, 2277
BsmBI CGTCTC 2 cut(s) 105, 2236
BsmFI GGGAC 2 cut(s) 87, 1187
BsmI GAATGC 2 cut(s) 2008, 2139
BsnI GGCC 5 cut(s) 300, 642, 1506, 1784, 2185
BsoBI CYCGRG 1 cut(s) 550
Bsp119I TTCGAA 2 cut(s) 921, 1302
Bsp1286I GDGCHC 2 cut(s) 657, 1678
Bsp1407I TGTACA 2 cut(s) 566, 2330
Bsp143I GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
BspANI GGCC 5 cut(s) 300, 642, 1506, 1784, 2185
BspCNI CTCAG 3 cut(s) 190, 473, 749
BspDI ATCGAT 1 cut(s) 281
BspFNI CGCG 1 cut(s) 725
BspHI TCATGA 1 cut(s) 1741
BspLI GGNNCC 4 cut(s) 321, 556, 670, 2011
BspMAI CTGCAG 1 cut(s) 600
BspPI GGATC 3 cut(s) 804, 812, 1157
BspQI GCTCTTC 1 cut(s) 2235
BspT104I TTCGAA 2 cut(s) 921, 1302
BspT107I GGYRCC 1 cut(s) 668
BsrBI CCGCTC 1 cut(s) 666
BsrDI GCAATG 2 cut(s) 1795, 1929
BsrFI RCCGGY 2 cut(s) 498, 2181
BsrGI TGTACA 2 cut(s) 566, 2330
BsrI ACTGG 4 cut(s) 254, 655, 832, 1318
BssAI RCCGGY 2 cut(s) 498, 2181
BssECI CCNNGG 8 cut(s) 166, 550, 644, 882, 914, 1138, 1507, 2079
BssMI GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 2 cut(s) 1123, 1186
BssT1I CCWWGG 4 cut(s) 166, 644, 882, 1507
Bst2BI CACGAG 2 cut(s) 1123, 1186
Bst2UI CCWGG 1 cut(s) 915
Bst4CI ACNGT 7 cut(s) 101, 290, 852, 872, 1378, 1935, 2321
Bst6I CTCTTC 4 cut(s) 364, 1512, 1596, 2235
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 2 cut(s) 566, 2330
BstBAI YACGTR 3 cut(s) 789, 906, 1052
BstBI TTCGAA 2 cut(s) 921, 1302
BstC8I GCNNGC 3 cut(s) 71, 1786, 2347
BstDEI CTNAG 4 cut(s) 177, 460, 736, 1757
BstDSI CCRYGG 1 cut(s) 2079
BstF5I GGATG 2 cut(s) 756, 2288
BstFNI CGCG 1 cut(s) 725
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 6 cut(s) 285, 744, 799, 807, 1152, 1777
BstMAI GTCTC 6 cut(s) 105, 133, 240, 672, 2236, 2277
BstMBI GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
BstMCI CGRYCG 1 cut(s) 1138
BstMWI GCNNNNNNNGC 2 cut(s) 453, 499
BstNI CCWGG 1 cut(s) 915
BstNSI RCATGY 4 cut(s) 573, 990, 2051, 2331
BstSCI CCNGG 6 cut(s) 506, 549, 550, 557, 913, 1137
BstSFI CTRYAG 3 cut(s) 596, 1242, 2100
BstSLI GKGCMC 1 cut(s) 657
BstUI CGCG 1 cut(s) 725
BstV1I GCAGC 1 cut(s) 2237
BstV2I GAAGAC 3 cut(s) 34, 714, 2270
BstX2I RGATCY 1 cut(s) 1774
BstXI CCANNNNNNTGG 1 cut(s) 831
BstYI RGATCY 1 cut(s) 1774
Bsu15I ATCGAT 1 cut(s) 281
BsuI GTATCC 3 cut(s) 385, 1446, 2034
BsuRI GGCC 5 cut(s) 300, 642, 1506, 1784, 2185
BsuTUI ATCGAT 1 cut(s) 281
BtgI CCRYGG 1 cut(s) 2079
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 2 cut(s) 756, 2288
BtsI GCAGTG 1 cut(s) 467
BtsIMutI CAGTG 2 cut(s) 467, 857
Cac8I GCNNGC 3 cut(s) 71, 1786, 2347
CciI TCATGA 1 cut(s) 1741
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 2 cut(s) 498, 2181
Cfr13I GGNCC 5 cut(s) 319, 339, 504, 641, 857
Cfr9I CCCGGG 1 cut(s) 550
ClaI ATCGAT 1 cut(s) 281
CpoI CGGWCCG 1 cut(s) 504
CseI GACGC 2 cut(s) 92, 1704
Csp6I GTAC 3 cut(s) 567, 669, 2331
CspCI CAANNNNNGTGG 2 cut(s) 1866, 1901
CspI CGGWCCG 1 cut(s) 504
CviQI GTAC 3 cut(s) 567, 669, 2331
DdeI CTNAG 4 cut(s) 177, 460, 736, 1757
DpnI GATC 6 cut(s) 284, 743, 798, 806, 1151, 1776
DpnII GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
DrdI GACNNNNNNGTC 2 cut(s) 254, 855
DriI GACNNNNNGTC 1 cut(s) 2271
DseDI GACNNNNNNGTC 2 cut(s) 254, 855
EaeI YGGCCR 2 cut(s) 1504, 2183
Eam1104I CTCTTC 4 cut(s) 364, 1512, 1596, 2235
Eam1105I GACNNNNNGTC 1 cut(s) 2271
EarI CTCTTC 4 cut(s) 364, 1512, 1596, 2235
Eco130I CCWWGG 4 cut(s) 166, 644, 882, 1507
Eco147I AGGCCT 1 cut(s) 300
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 4 cut(s) 319, 339, 504, 857
Eco57I CTGAAG 3 cut(s) 145, 1887, 2282
Eco72I CACGTG 3 cut(s) 789, 906, 1052
Eco88I CYCGRG 1 cut(s) 550
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 1 cut(s) 913
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 4 cut(s) 166, 644, 882, 1507
ErhI CCWWGG 4 cut(s) 166, 644, 882, 1507
Esp3I CGTCTC 2 cut(s) 105, 2236
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 2 cut(s) 87, 1187
FauI CCCGC 2 cut(s) 627, 2257
FauNDI CATATG 1 cut(s) 1897
FblI GTMKAC 1 cut(s) 1043
Fnu4HI GCNGC 2 cut(s) 640, 2226
FokI GGATG 2 cut(s) 763, 2275
Fsp4HI GCNGC 2 cut(s) 640, 2226
FspBI CTAG 8 cut(s) 60, 152, 936, 1722, 1842, 1979, 1992, 2277
FspI TGCGCA 1 cut(s) 611
GlaI GCGC 1 cut(s) 611
GluI GCNGC 2 cut(s) 640, 2226
GsaI CCCAGC 2 cut(s) 881, 1290
GsuI CTGGAG 1 cut(s) 696
HaeIII GGCC 5 cut(s) 300, 642, 1506, 1784, 2185
HapII CCGG 8 cut(s) 499, 507, 551, 558, 1034, 1138, 1913, 2182
HgaI GACGC 2 cut(s) 92, 1704
HhaI GCGC 1 cut(s) 612
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 2 cut(s) 700, 1293
HindII GTYRAC 2 cut(s) 700, 1293
HindIII AAGCTT 2 cut(s) 383, 1415
HpaI GTTAAC 1 cut(s) 1293
HpaII CCGG 8 cut(s) 499, 507, 551, 558, 1034, 1138, 1913, 2182
HphI GGTGA 8 cut(s) 302, 354, 766, 924, 962, 1902, 2117, 2229
Hpy166II GTNNAC 6 cut(s) 700, 786, 1044, 1057, 1293, 2317
Hpy188I TCNGA 6 cut(s) 110, 463, 739, 1351, 1542, 1951
Hpy188III TCNNGA 9 cut(s) 28, 215, 768, 1009, 1211, 1328, 1702, 1742, 1752
Hpy8I GTNNAC 6 cut(s) 700, 786, 1044, 1057, 1293, 2317
HpyCH4III ACNGT 7 cut(s) 101, 290, 852, 872, 1378, 1935, 2321
HpyCH4IV ACGT 4 cut(s) 348, 788, 905, 1051
HpyF10VI GCNNNNNNNGC 2 cut(s) 453, 499
HpyF3I CTNAG 4 cut(s) 177, 460, 736, 1757
HpySE526I ACGT 4 cut(s) 348, 788, 905, 1051
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 1 cut(s) 610
KpnI GGTACC 1 cut(s) 672
KspAI GTTAAC 1 cut(s) 1293
Kzo9I GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
LguI GCTCTTC 1 cut(s) 2235
LmnI GCTCC 1 cut(s) 1858
Lsp1109I GCAGC 1 cut(s) 2237
LweI GCATC 2 cut(s) 1222, 2212
MaeI CTAG 8 cut(s) 60, 152, 936, 1722, 1842, 1979, 1992, 2277
MaeII ACGT 4 cut(s) 348, 788, 905, 1051
MaeIII GTNAC 6 cut(s) 349, 872, 1353, 1908, 2111, 2323
MalI GATC 6 cut(s) 284, 743, 798, 806, 1151, 1776
MbiI CCGCTC 1 cut(s) 666
MboI GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
MfeI CAATTG 1 cut(s) 2334
MflI RGATCY 1 cut(s) 1774
MhlI GDGCHC 2 cut(s) 657, 1678
MlsI TGGCCA 1 cut(s) 1506
MluNI TGGCCA 1 cut(s) 1506
MlyI GAGTC 6 cut(s) 728, 952, 1031, 1236, 2279, 2281
MmeI TCCRAC 4 cut(s) 492, 1579, 1667, 1870
Mox20I TGGCCA 1 cut(s) 1506
MroXI GAANNNNTTC 1 cut(s) 1536
MscI TGGCCA 1 cut(s) 1506
MseI TTAA 6 cut(s) 1292, 1524, 1572, 1659, 1682, 2213
MslI CAYNNNNRTG 3 cut(s) 749, 1064, 2155
Msp20I TGGCCA 1 cut(s) 1506
MspA1I CMGCKG 1 cut(s) 674
MspI CCGG 8 cut(s) 499, 507, 551, 558, 1034, 1138, 1913, 2182
MspR9I CCNGG 6 cut(s) 508, 551, 552, 559, 915, 1139
MunI CAATTG 1 cut(s) 2334
Mva1269I GAATGC 2 cut(s) 2008, 2139
MvaI CCWGG 1 cut(s) 915
MvnI CGCG 1 cut(s) 725
MwoI GCNNNNNNNGC 2 cut(s) 453, 499
NciI CCSGG 5 cut(s) 508, 551, 552, 559, 1139
NdeI CATATG 1 cut(s) 1897
NdeII GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
NlaIV GGNNCC 4 cut(s) 321, 556, 670, 2011
NmuCI GTSAC 3 cut(s) 872, 1908, 2323
NsbI TGCGCA 1 cut(s) 611
NspI RCATGY 4 cut(s) 573, 990, 2051, 2331
NspV TTCGAA 2 cut(s) 921, 1302
OliI CACNNNNGTG 1 cut(s) 2155
PagI TCATGA 1 cut(s) 1741
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 4 cut(s) 569, 986, 2047, 2327
PciSI GCTCTTC 1 cut(s) 2235
PctI GAATGC 2 cut(s) 2008, 2139
PdmI GAANNNNTTC 1 cut(s) 1536
PfeI GAWTC 8 cut(s) 211, 263, 764, 839, 923, 1609, 1748, 2093
PkrI GCNGC 2 cut(s) 641, 2227
PleI GAGTC 6 cut(s) 728, 951, 1031, 1235, 2279, 2280
PmaCI CACGTG 3 cut(s) 789, 906, 1052
PmlI CACGTG 3 cut(s) 789, 906, 1052
PpsI GAGTC 6 cut(s) 728, 951, 1031, 1235, 2279, 2280
Ppu21I YACGTR 3 cut(s) 789, 906, 1052
PpuMI RGGWCCY 1 cut(s) 319
PscI ACATGT 4 cut(s) 569, 986, 2047, 2327
PsiI TTATAA 1 cut(s) 1446
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 1 cut(s) 913
PspCI CACGTG 3 cut(s) 789, 906, 1052
PspFI CCCAGC 2 cut(s) 877, 1286
PspGI CCWGG 1 cut(s) 913
PspN4I GGNNCC 4 cut(s) 321, 556, 670, 2011
PspPI GGNCC 5 cut(s) 319, 339, 504, 641, 857
PspPPI RGGWCCY 1 cut(s) 319
PstI CTGCAG 1 cut(s) 600
PsuI RGATCY 1 cut(s) 1774
RsaI GTAC 3 cut(s) 568, 670, 2332
RsaNI GTAC 3 cut(s) 567, 669, 2331
RseI CAYNNNNRTG 3 cut(s) 749, 1064, 2155
Rsr2I CGGWCCG 1 cut(s) 504
RsrII CGGWCCG 1 cut(s) 504
SapI GCTCTTC 1 cut(s) 2235
SaqAI TTAA 6 cut(s) 1292, 1524, 1572, 1659, 1682, 2213
SatI GCNGC 2 cut(s) 640, 2226
Sau3AI GATC 6 cut(s) 282, 741, 796, 804, 1149, 1774
Sau96I GGNCC 5 cut(s) 319, 339, 504, 641, 857
SchI GAGTC 6 cut(s) 728, 952, 1031, 1236, 2279, 2281
ScrFI CCNGG 6 cut(s) 508, 551, 552, 559, 915, 1139
SduI GDGCHC 2 cut(s) 657, 1678
SfaNI GCATC 2 cut(s) 1222, 2212
SfcI CTRYAG 3 cut(s) 596, 1242, 2100
SfuI TTCGAA 2 cut(s) 921, 1302
SinI GGWCC 4 cut(s) 319, 339, 504, 857
SmaI CCCGGG 1 cut(s) 552
SmiMI CAYNNNNRTG 3 cut(s) 749, 1064, 2155
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
SseBI AGGCCT 1 cut(s) 300
SspI AATATT 2 cut(s) 1268, 1848
SspMI CTAG 8 cut(s) 60, 152, 936, 1722, 1842, 1979, 1992, 2277
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 6 cut(s) 506, 549, 550, 557, 913, 1137
StyI CCWWGG 4 cut(s) 166, 644, 882, 1507
TaaI ACNGT 7 cut(s) 101, 290, 852, 872, 1378, 1935, 2321
TaiI ACGT 4 cut(s) 351, 791, 908, 1054
TaqI TCGA 7 cut(s) 15, 281, 921, 1225, 1230, 1302, 1701
TatI WGTACW 2 cut(s) 566, 2330
TauI GCSGC 1 cut(s) 642
TfiI GAWTC 8 cut(s) 211, 263, 764, 839, 923, 1609, 1748, 2093
Tru1I TTAA 6 cut(s) 1292, 1524, 1572, 1659, 1682, 2213
Tru9I TTAA 6 cut(s) 1292, 1524, 1572, 1659, 1682, 2213
TscAI CASTG 2 cut(s) 474, 857
TseFI GTSAC 3 cut(s) 872, 1908, 2323
TseI GCWGC 1 cut(s) 2225
Tsp45I GTSAC 3 cut(s) 872, 1908, 2323
TspGWI ACGGA 1 cut(s) 861
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 2 cut(s) 474, 857
VpaK11BI GGWCC 4 cut(s) 319, 339, 504, 857
XapI RAATTY 4 cut(s) 172, 809, 2035, 2168
XceI RCATGY 4 cut(s) 573, 990, 2051, 2331
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 1 cut(s) 1043
XmnI GAANNNNTTC 1 cut(s) 1536
XspI CTAG 8 cut(s) 60, 152, 936, 1722, 1842, 1979, 1992, 2277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.