RchiOBHm_Chr5g0034351

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Forward (+)
28177659 .. 28181979
4321 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31337

Sequence Viewer

Length: 2649 bp
ATGAGTTCCAGCATCGAAGCGTTTATCCTGATATTGCTTCTCTTACTTCTTCTCCCCTCTAGAATTTGCCAGCTTCCCCTTGACGCCCTTACGTCAGACCGTCCCATCAGAGATGGCGAAGTTTTAGTCTCTAGCACGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAATTCTCAGCACCGCTACGTTGGAGTCTGGTATAACAAAGTTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGATAACCCAGTGAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCGAAGTACCACTCTTTGGTCCGCAAATGTTACTCTATCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATAGCCAAAGAGTTCTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTTCCTCTATGAAGATTGGGCTGAACTGGCGGTCCGGTTTGGAGTGGCACCTAACATCTTGGAAGTCAAAAGATGATCCGGGAACCGGGAGTTGTACATATGGGATAGACCCGATGGGGTTTCCGCAGTTGTTTTTGTACAAGGGTAGAGGGGCATCGTGGCGGGGCGGCCCTTGGATCGGGGACAGATGGAGCGGTCTACCAGTAATAACCGCTACCGTTGGAGCCTACAATGTGAGTTTTGTCAATAATGAAGACGAGCTATCCTTCGTGTATGCTATTGCCAGGGACTCAGTGATCACAAGGGGGGTGATAGATGAATCAGGAATATATCAACTGCTCGTGTGGAATGATCAGGAAAATCAATGGACCAAATTCGTCTCCTACCCGAGTGAGTGGTGTGAGCAATATGGACAGTGTGGTCCAAATACTAACTGTGACTCAGACAAGGACTATATGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTCCTTTGAGAGTTGGCGGGGGTGGGTGCATTAGGAAAGCTGGAGCGTCCACGTGTCAAAATGGAGAAGGGTTCATGAAGGTGGCGCATGTAAAAATACCGGACTCGTCTACGGCACGTGTGAACATGAGTATGAGTTTGAAAGGGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACAGCTTACACGAATGAGGATGAGCAGGGAGGTGGGATCGGGTGTGTGACATGGCACGGGGACTTGATGGACACGAGGACTTTCTCCAATGGTGGTCAAAATTTATATGTTCGAGTTGACACAACTTCTTTAGGCAAAGAGGAACATAATAATAATGGTCGTAGTGGTTTCGATGGAGGCTTGGATGTCGGCCGTAACGGCTGTTGGAGGATAGAGTTGGCTAGGTTCCTTGTTGGATCTGGTTTAGTTTTTGGTCTGATGCTGTTGATGTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGACAAGGCTGGCAATTTCACTAGGATCTGTTACAGTTTTTCTTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCATAGGCAAAATAAATATCCACTTAAACTTACTGCCGGGTCAACCTACTTCGAAGAAGCTACTGGTAGATTAGCTCTTCATGATAGTAGAATAAACTCGGAGTTATTATTCTTTCATCTAAAAACCATAGCAACCGCCACAAAGAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGTTTTGGCTGCGTTTATAAGGGCATACTTTATGATGGAAAGGAAATAGCCGTTCAAAGACTATCCAAGTTTTCTAGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTAATTGCAAAACTCCAACATAGAAACCTTGTCAAGATTTTAGGTTGTTGTCTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACACTTTCATCTTTAATGAAACAAGAAGAGTACTTTTAAGTTGGACAAGACGCCTCGTGATAATCTTTGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCGAGACTGAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATGTTTAGAGGGGAGCAAACTGAAGCAAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGAAGGATTGTTTTCAATCAAGTCTGATGTGTATAGTTTTGGTGTCTTATTACTAGAAATCGTTACTGGCAAAAAGAATGCTGGTTCCCATGAGGGGTATCCTTATTCAAATTTGATCGGACATATTTGGGAGTTGTGGAAAGAAGGCAGAGTCGTGGAAATCATCGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATTATAAGGTGCATTCAAATCGCACTCTTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCCAGAGTTGTTTCCATGTTAGGTAATGATTCAGCTCTTCCTTCACCAACACAACCCGCATTTTTACTAAAGAGAATGAGTCCTAGTGGAAACTCATCCAGCAACAAAGGAGCTAATTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

882

Amino Acids

97.78

Weight (kDa)

7.72

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 178 7e-33 D-mannose binding lectin
S_locus_glycop PF00954 210 - 321 1.1e-24 S-locus glycoprotein domain
PAN_2 PF08276 341 - 407 6.8e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 567 - 837 1.7e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 567 - 833 4.6e-42 Protein kinase domain
DUF3403 PF11883 839 - 882 8.8e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1743, 2429
AasI GACNNNNNNGTC 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 516
AccB7I CCANNNNNTGG 2 cut(s) 231, 336
AccBSI CCGCTC 1 cut(s) 663
AccI GTMKAC 2 cut(s) 667, 1076
AclWI GGATC 5 cut(s) 539, 653, 1190, 1390, 1489
AcoI YGGCCR 2 cut(s) 1336, 2480
AcsI RAATTY 7 cut(s) 63, 172, 842, 1246, 1693, 2332, 2465
AcuI CTGAAG 2 cut(s) 145, 2184
AcvI CACGTG 3 cut(s) 939, 1020, 1085
AcyI GRCGYC 2 cut(s) 84, 1993
AfaI GTAC 5 cut(s) 328, 565, 608, 1974, 2629
AfiI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1518, 2316
AflIII ACRYGT 3 cut(s) 1019, 1084, 2624
AgsI TTSAA 9 cut(s) 1108, 1706, 1781, 1814, 1892, 2110, 2238, 2331, 2441
AjnI CCWGG 2 cut(s) 752, 946
AjuI GAANNNNNNNTTGG 4 cut(s) 1698, 1713, 1730, 1745
AleI CACNNNNGTG 1 cut(s) 2452
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
Alw26I GTCTC 3 cut(s) 133, 853, 2044
AlwI GGATC 5 cut(s) 539, 653, 1190, 1390, 1489
Ama87I CYCGRG 1 cut(s) 856
AoxI GGCC 5 cut(s) 298, 637, 1336, 2079, 2480
ApeKI GCWGC 1 cut(s) 1734
ApoI RAATTY 7 cut(s) 63, 172, 842, 1246, 1693, 2332, 2465
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
Asp700I GAANNNNTTC 1 cut(s) 1833
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
AsuC2I CCSGG 4 cut(s) 168, 549, 556, 1585
AsuHPI GGTGA 7 cut(s) 302, 354, 790, 957, 2199, 2414, 2526
AsuII TTCGAA 2 cut(s) 954, 1599
AvaI CYCGRG 1 cut(s) 856
AvaII GGWCC 5 cut(s) 319, 339, 501, 837, 890
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BanI GGYRCC 1 cut(s) 516
BauI CACGAG 3 cut(s) 809, 1219, 1997
BbrPI CACGTG 3 cut(s) 939, 1020, 1085
BbsI GAAGAC 2 cut(s) 729, 1463
BbvI GCAGC 1 cut(s) 1721
BccI CCATC 9 cut(s) 107, 113, 287, 577, 651, 1126, 1207, 1313, 1754
BceAI ACGGC 4 cut(s) 1095, 1323, 1360, 1760
BcgI CGANNNNNNTGC 2 cut(s) 2425, 2459
BciT130I CCWGG 2 cut(s) 754, 948
BciVI GTATCC 2 cut(s) 385, 2331
BclI TGATCA 2 cut(s) 765, 820
BcnI CCSGG 4 cut(s) 168, 549, 556, 1585
BcoDI GTCTC 3 cut(s) 133, 853, 2044
BfmI CTRYAG 1 cut(s) 2397
BfuI GTATCC 2 cut(s) 385, 2331
BglI GCCNNNNNGGC 1 cut(s) 1344
BglII AGATCT 1 cut(s) 2071
BisI GCNGC 2 cut(s) 637, 1735
BlsI GCNGC 2 cut(s) 638, 1736
BmcAI AGTACT 1 cut(s) 1974
Bme1390I CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1585
Bme18I GGWCC 5 cut(s) 319, 339, 501, 837, 890
BmeT110I CYCGRG 1 cut(s) 856
BmgT120I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
BmiI GGNNCC 5 cut(s) 518, 553, 694, 1373, 2308
BmrFI CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1585
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 3 cut(s) 21, 632, 1395
BmuI ACTGGG 1 cut(s) 248
BpiI GAAGAC 2 cut(s) 729, 1463
BpmI CTGGAG 1 cut(s) 1029
Bpu14I TTCGAA 2 cut(s) 954, 1599
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 4 cut(s) 168, 549, 556, 1585
Bsa29I ATCGAT 2 cut(s) 281, 2388
BsaAI YACGTR 3 cut(s) 939, 1020, 1085
BsaBI GATNNNNATC 1 cut(s) 1910
BsaHI GRCGYC 2 cut(s) 84, 1993
BsaJI CCNNGG 5 cut(s) 166, 641, 753, 947, 1804
BsaWI WCCGGW 2 cut(s) 503, 1066
BsaXI ACNNNNNCTCC 4 cut(s) 36, 66, 288, 318
Bsc4I CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1518, 2316
Bse118I RCCGGY 1 cut(s) 2478
Bse1I ACTGG 5 cut(s) 254, 500, 671, 1615, 2293
Bse3DI GCAATG 2 cut(s) 2092, 2226
Bse8I GATNNNNATC 1 cut(s) 1910
BseBI CCWGG 2 cut(s) 754, 948
BseCI ATCGAT 2 cut(s) 281, 2388
BseDI CCNNGG 5 cut(s) 166, 641, 753, 947, 1804
BseGI GGATG 4 cut(s) 1171, 1336, 1536, 2585
BseJI GATNNNNATC 1 cut(s) 1910
BseLI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1518, 2316
BseMI GCAATG 2 cut(s) 2092, 2226
BseMII CTCAG 5 cut(s) 191, 471, 774, 924, 2045
BseNI ACTGG 5 cut(s) 254, 500, 671, 1615, 2293
BseX3I CGGCCG 1 cut(s) 1336
BseXI GCAGC 1 cut(s) 1721
Bsh1285I CGRYCG 1 cut(s) 1339
BshFI GGCC 5 cut(s) 300, 639, 1338, 2081, 2482
BshNI GGYRCC 1 cut(s) 516
BshVI ATCGAT 2 cut(s) 281, 2388
BsiEI CGRYCG 1 cut(s) 1339
BsiHKCI CYCGRG 1 cut(s) 856
BsiSI CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1584, 2479
BslFI GGGAC 4 cut(s) 87, 665, 770, 1220
BslI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1518, 2316
BsmAI GTCTC 3 cut(s) 133, 853, 2044
BsmBI CGTCTC 1 cut(s) 853
BsmFI GGGAC 4 cut(s) 87, 665, 770, 1220
BsmI GAATGC 2 cut(s) 2305, 2436
BsnI GGCC 5 cut(s) 300, 639, 1338, 2081, 2482
BsoBI CYCGRG 1 cut(s) 856
Bsp119I TTCGAA 2 cut(s) 954, 1599
Bsp1407I TGTACA 3 cut(s) 563, 606, 2627
BspANI GGCC 5 cut(s) 300, 639, 1338, 2081, 2482
BspCNI CTCAG 5 cut(s) 190, 470, 773, 923, 2046
BspDI ATCGAT 2 cut(s) 281, 2388
BspHI TCATGA 3 cut(s) 1041, 1627, 2038
BspLI GGNNCC 5 cut(s) 518, 553, 694, 1373, 2308
BspPI GGATC 5 cut(s) 539, 653, 1190, 1390, 1489
BspQI GCTCTTC 2 cut(s) 1629, 2532
BspT104I TTCGAA 2 cut(s) 954, 1599
BspT107I GGYRCC 1 cut(s) 516
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 2 cut(s) 2092, 2226
BsrFI RCCGGY 1 cut(s) 2478
BsrGI TGTACA 3 cut(s) 563, 606, 2627
BsrI ACTGG 5 cut(s) 254, 500, 671, 1615, 2293
BssAI RCCGGY 1 cut(s) 2478
BssECI CCNNGG 5 cut(s) 166, 641, 753, 947, 1804
BssNI GRCGYC 2 cut(s) 84, 1993
BssSI CACGAG 3 cut(s) 809, 1219, 1997
BssT1I CCWWGG 2 cut(s) 641, 1804
Bst2BI CACGAG 3 cut(s) 809, 1219, 1997
Bst2UI CCWGG 2 cut(s) 754, 948
Bst4CI ACNGT 5 cut(s) 101, 688, 885, 905, 1492
Bst6I CTCTTC 5 cut(s) 1629, 1809, 1893, 1963, 2532
BstACI GRCGYC 2 cut(s) 84, 1993
BstAUI TGTACA 3 cut(s) 563, 606, 2627
BstBAI YACGTR 3 cut(s) 939, 1020, 1085
BstBI TTCGAA 2 cut(s) 954, 1599
BstC8I GCNNGC 6 cut(s) 71, 137, 934, 1467, 2083, 2644
BstDEI CTNAG 6 cut(s) 177, 457, 760, 910, 1448, 2054
BstF5I GGATG 4 cut(s) 1171, 1336, 1536, 2585
BstHHI GCGC 1 cut(s) 1054
BstMAI GTCTC 3 cut(s) 133, 853, 2044
BstMCI CGRYCG 1 cut(s) 1339
BstMWI GCNNNNNNNGC 3 cut(s) 496, 1344, 1427
BstNI CCWGG 2 cut(s) 754, 948
BstNSI RCATGY 2 cut(s) 1058, 2628
BstSCI CCNGG 6 cut(s) 166, 547, 554, 752, 946, 1583
BstSFI CTRYAG 1 cut(s) 2397
BstV1I GCAGC 1 cut(s) 1721
BstV2I GAAGAC 2 cut(s) 729, 1463
BstX2I RGATCY 3 cut(s) 1382, 1481, 2071
BstXI CCANNNNNNTGG 2 cut(s) 388, 2182
BstYI RGATCY 3 cut(s) 1382, 1481, 2071
BstZI CGGCCG 1 cut(s) 1336
Bsu15I ATCGAT 2 cut(s) 281, 2388
BsuI GTATCC 2 cut(s) 385, 2331
BsuRI GGCC 5 cut(s) 300, 639, 1338, 2081, 2482
BsuTUI ATCGAT 2 cut(s) 281, 2388
BtsCI GGATG 4 cut(s) 1171, 1336, 1536, 2585
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 4 cut(s) 261, 464, 768, 890
Cac8I GCNNGC 6 cut(s) 71, 137, 934, 1467, 2083, 2644
CciI TCATGA 3 cut(s) 1041, 1627, 2038
CfoI GCGC 1 cut(s) 1054
Cfr10I RCCGGY 1 cut(s) 2478
Cfr13I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
ClaI ATCGAT 2 cut(s) 281, 2388
CpoI CGGWCCG 1 cut(s) 501
CseI GACGC 3 cut(s) 92, 1002, 2001
Csp6I GTAC 5 cut(s) 327, 564, 607, 1973, 2628
CspI CGGWCCG 1 cut(s) 501
CviQI GTAC 5 cut(s) 327, 564, 607, 1973, 2628
DdeI CTNAG 6 cut(s) 177, 457, 760, 910, 1448, 2054
DrdI GACNNNNNNGTC 1 cut(s) 888
DseDI GACNNNNNNGTC 1 cut(s) 888
EaeI YGGCCR 2 cut(s) 1336, 2480
EagI CGGCCG 1 cut(s) 1336
Eam1104I CTCTTC 5 cut(s) 1629, 1809, 1893, 1963, 2532
EarI CTCTTC 5 cut(s) 1629, 1809, 1893, 1963, 2532
EclXI CGGCCG 1 cut(s) 1336
Eco130I CCWWGG 2 cut(s) 641, 1804
Eco147I AGGCCT 1 cut(s) 300
Eco47I GGWCC 5 cut(s) 319, 339, 501, 837, 890
Eco52I CGGCCG 1 cut(s) 1336
Eco57I CTGAAG 2 cut(s) 145, 2184
Eco72I CACGTG 3 cut(s) 939, 1020, 1085
Eco88I CYCGRG 1 cut(s) 856
EcoRII CCWGG 2 cut(s) 752, 946
EcoT14I CCWWGG 2 cut(s) 641, 1804
ErhI CCWWGG 2 cut(s) 641, 1804
Esp3I CGTCTC 1 cut(s) 853
FaqI GGGAC 4 cut(s) 87, 665, 770, 1220
FauI CCCGC 3 cut(s) 624, 977, 2554
FauNDI CATATG 2 cut(s) 568, 2194
FbaI TGATCA 2 cut(s) 765, 820
FblI GTMKAC 2 cut(s) 667, 1076
Fnu4HI GCNGC 2 cut(s) 637, 1735
FokI GGATG 4 cut(s) 1178, 1343, 1543, 2572
Fsp4HI GCNGC 2 cut(s) 637, 1735
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 2 cut(s) 637, 1735
GsuI CTGGAG 1 cut(s) 1029
HaeIII GGCC 5 cut(s) 300, 639, 1338, 2081, 2482
HapII CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1584, 2479
HgaI GACGC 3 cut(s) 92, 1002, 2001
HhaI GCGC 1 cut(s) 1054
Hin1I GRCGYC 2 cut(s) 84, 1993
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HincII GTYRAC 2 cut(s) 1264, 1590
HindII GTYRAC 2 cut(s) 1264, 1590
HindIII AAGCTT 2 cut(s) 383, 1712
HpaII CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1584, 2479
HphI GGTGA 7 cut(s) 302, 354, 790, 957, 2199, 2414, 2526
Hpy166II GTNNAC 6 cut(s) 668, 1017, 1077, 1090, 1264, 1590
Hpy188I TCNGA 8 cut(s) 97, 110, 460, 913, 1404, 1648, 2248, 2342
Hpy8I GTNNAC 6 cut(s) 668, 1017, 1077, 1090, 1264, 1590
HpyAV CCTTC 8 cut(s) 434, 745, 1028, 1039, 1715, 2219, 2360, 2541
HpyCH4III ACNGT 5 cut(s) 101, 688, 885, 905, 1492
HpyCH4IV ACGT 5 cut(s) 92, 189, 938, 1019, 1084
HpyF10VI GCNNNNNNNGC 3 cut(s) 496, 1344, 1427
HpyF3I CTNAG 6 cut(s) 177, 457, 760, 910, 1448, 2054
HpySE526I ACGT 5 cut(s) 92, 189, 938, 1019, 1084
Hsp92I GRCGYC 2 cut(s) 84, 1993
HspAI GCGC 1 cut(s) 1052
Ksp22I TGATCA 2 cut(s) 765, 820
LguI GCTCTTC 2 cut(s) 1629, 2532
LmnI GCTCC 5 cut(s) 660, 692, 1010, 2155, 2600
Lsp1109I GCAGC 1 cut(s) 1721
LweI GCATC 3 cut(s) 21, 632, 1395
MaeII ACGT 5 cut(s) 92, 189, 938, 1019, 1084
MaeIII GTNAC 8 cut(s) 349, 905, 1192, 1340, 1486, 2205, 2284, 2620
MbiI CCGCTC 1 cut(s) 663
MfeI CAATTG 1 cut(s) 2631
MflI RGATCY 3 cut(s) 1382, 1481, 2071
MlyI GAGTC 6 cut(s) 204, 752, 902, 1064, 2382, 2578
MmeI TCCRAC 7 cut(s) 172, 670, 1331, 1360, 1876, 1964, 2167
MroXI GAANNNNTTC 1 cut(s) 1833
MseI TTAA 4 cut(s) 1572, 1821, 1956, 1979
MslI CAYNNNNRTG 3 cut(s) 1046, 1097, 2452
MspI CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1584, 2479
MspR9I CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1585
MunI CAATTG 1 cut(s) 2631
Mva1269I GAATGC 2 cut(s) 2305, 2436
MvaI CCWGG 2 cut(s) 754, 948
MwoI GCNNNNNNNGC 3 cut(s) 496, 1344, 1427
NciI CCSGG 4 cut(s) 168, 549, 556, 1585
NdeI CATATG 2 cut(s) 568, 2194
NlaIV GGNNCC 5 cut(s) 518, 553, 694, 1373, 2308
NmuCI GTSAC 4 cut(s) 905, 1192, 2205, 2620
NspI RCATGY 2 cut(s) 1058, 2628
NspV TTCGAA 2 cut(s) 954, 1599
OliI CACNNNNGTG 1 cut(s) 2452
PagI TCATGA 3 cut(s) 1041, 1627, 2038
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 1 cut(s) 2624
PciSI GCTCTTC 2 cut(s) 1629, 2532
PctI GAATGC 2 cut(s) 2305, 2436
PdmI GAANNNNTTC 1 cut(s) 1833
PfeI GAWTC 8 cut(s) 263, 788, 956, 1906, 2045, 2390, 2405, 2519
PflMI CCANNNNNTGG 2 cut(s) 231, 336
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 2 cut(s) 638, 1736
PleI GAGTC 6 cut(s) 203, 752, 902, 1064, 2381, 2577
PmaCI CACGTG 3 cut(s) 939, 1020, 1085
PmlI CACGTG 3 cut(s) 939, 1020, 1085
PpsI GAGTC 6 cut(s) 203, 752, 902, 1064, 2381, 2577
Ppu21I YACGTR 3 cut(s) 939, 1020, 1085
PscI ACATGT 1 cut(s) 2624
PsiI TTATAA 2 cut(s) 1743, 2429
Psp6I CCWGG 2 cut(s) 752, 946
PspCI CACGTG 3 cut(s) 939, 1020, 1085
PspGI CCWGG 2 cut(s) 752, 946
PspN4I GGNNCC 5 cut(s) 518, 553, 694, 1373, 2308
PspPI GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
PsuI RGATCY 3 cut(s) 1382, 1481, 2071
RsaI GTAC 5 cut(s) 328, 565, 608, 1974, 2629
RsaNI GTAC 5 cut(s) 327, 564, 607, 1973, 2628
RseI CAYNNNNRTG 3 cut(s) 1046, 1097, 2452
Rsr2I CGGWCCG 1 cut(s) 501
RsrII CGGWCCG 1 cut(s) 501
SapI GCTCTTC 2 cut(s) 1629, 2532
SaqAI TTAA 4 cut(s) 1572, 1821, 1956, 1979
SatI GCNGC 2 cut(s) 637, 1735
Sau96I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
ScaI AGTACT 1 cut(s) 1974
SchI GAGTC 6 cut(s) 204, 752, 902, 1064, 2382, 2578
ScrFI CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1585
SfaNI GCATC 3 cut(s) 21, 632, 1395
SfcI CTRYAG 1 cut(s) 2397
SfuI TTCGAA 2 cut(s) 954, 1599
SinI GGWCC 5 cut(s) 319, 339, 501, 837, 890
SmiMI CAYNNNNRTG 3 cut(s) 1046, 1097, 2452
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
SseBI AGGCCT 1 cut(s) 300
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 6 cut(s) 166, 547, 554, 752, 946, 1583
StyI CCWWGG 2 cut(s) 641, 1804
TaaI ACNGT 5 cut(s) 101, 688, 885, 905, 1492
TaiI ACGT 5 cut(s) 95, 192, 941, 1022, 1087
TaqI TCGA 8 cut(s) 15, 281, 954, 1258, 1317, 1599, 2048, 2388
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 4 cut(s) 563, 606, 1972, 2627
TauI GCSGC 1 cut(s) 639
TfiI GAWTC 8 cut(s) 263, 788, 956, 1906, 2045, 2390, 2405, 2519
Tru1I TTAA 4 cut(s) 1572, 1821, 1956, 1979
Tru9I TTAA 4 cut(s) 1572, 1821, 1956, 1979
TscAI CASTG 4 cut(s) 261, 471, 768, 890
TseFI GTSAC 4 cut(s) 905, 1192, 2205, 2620
TseI GCWGC 1 cut(s) 1734
Tsp45I GTSAC 4 cut(s) 905, 1192, 2205, 2620
TspRI CASTG 4 cut(s) 261, 471, 768, 890
Van91I CCANNNNNTGG 2 cut(s) 231, 336
VpaK11BI GGWCC 5 cut(s) 319, 339, 501, 837, 890
XapI RAATTY 7 cut(s) 63, 172, 842, 1246, 1693, 2332, 2465
XbaI TCTAGA 1 cut(s) 59
XceI RCATGY 2 cut(s) 1058, 2628
XmiI GTMKAC 2 cut(s) 667, 1076
XmnI GAANNNNTTC 1 cut(s) 1833
ZrmI AGTACT 1 cut(s) 1974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.