Rorug04G0414800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
57626321 .. 57630665
4345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0414800.1

Sequence Viewer

Length: 744 bp
ATGAGTCCCCAGAGTACATTGAATCCTTGTAGAGCCCTAGAGGGCATGCATGGGGTACATGTGGTGCCTAGTTCACGGTTCGAATCAGAAGAGACTACTCAAGATGGGGACTTTGCTCACTCAACTTGTACAAGTTCGGCTATTGGAACAAATTTGTCTATGCAGCGAGTATGGCAGCACACACCACCATGTTTGAAGCCTATTCAGGGTTGCATTCACGGCGATCGTAACCTTGCAGAAACAGCTGTTAATGTGCTCACTTCACTTCCTTTCATAGTTCTTGGGATCCATGCCCCAAGGAAGAATCTAAACACCAAGCTATATGCTAATTCATTAATTGGAGTTGGAGTTACCTCGAGTTTATATCATTGTTCAAGAGGAAAACTAAGGAAATATATGAGATGGGCTGACTATACAATGATAGCTACAGCAACAGTATGTCTCTCAAGAGCACTCAGAAATGAAAACCCAAAATTGCTCATGGCAGCTTCTGCAGTATTTCTACCTATCCAGCCTCTGATGGTTTCAGCTGTTCATACTGGAATGATGGAGGTAGCGTTTGCCAAAAGAGCGTTAAAAGATCCAGAGCTAAGGATGGCACACAATGTACACAAGATGTCGTCATTATTGAGTGGTGTACTTTTTATTGCAGATGATGTGTTTCCCAGAACTCCATACCTTCATGCTGCATGGCATCTTGCTGCAGCTGTAGGTGTTAGCACCTGCAATAAGCTTCTCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

247

Amino Acids

27.03

Weight (kDa)

9.16

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 731
Acc36I ACCTGC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 64
AclWI GGATC 3 cut(s) 280, 293, 575
AcsI RAATTY 1 cut(s) 151
AfaI GTAC 5 cut(s) 16, 57, 130, 609, 639
AfiI CCNNNNNNNGG 1 cut(s) 206
AflIII ACRYGT 1 cut(s) 58
AgsI TTSAA 3 cut(s) 22, 196, 375
AluBI AGCT 8 cut(s) 245, 319, 425, 488, 530, 589, 707, 733
AluI AGCT 8 cut(s) 245, 319, 425, 488, 530, 589, 707, 733
Alw21I GWGCWC 2 cut(s) 258, 454
Alw26I GTCTC 2 cut(s) 86, 446
AlwI GGATC 3 cut(s) 280, 293, 575
AlwNI CAGNNNCTG 2 cut(s) 491, 517
Ama87I CYCGRG 2 cut(s) 355, 737
ApeKI GCWGC 6 cut(s) 163, 175, 485, 686, 701, 704
ApoI RAATTY 1 cut(s) 151
AseI ATTAAT 1 cut(s) 335
AsuII TTCGAA 1 cut(s) 81
AvaI CYCGRG 2 cut(s) 355, 737
BamHI GGATCC 1 cut(s) 285
BanI GGYRCC 1 cut(s) 64
BanII GRGCYC 1 cut(s) 37
Bbv12I GWGCWC 2 cut(s) 258, 454
BbvI GCAGC 6 cut(s) 175, 187, 497, 673, 688, 716
BccI CCATC 5 cut(s) 98, 396, 514, 541, 589
BceAI ACGGC 1 cut(s) 235
BcoDI GTCTC 2 cut(s) 86, 446
BfaI CTAG 2 cut(s) 38, 69
BfmI CTRYAG 4 cut(s) 426, 492, 702, 708
BfuAI ACCTGC 1 cut(s) 731
BisI GCNGC 6 cut(s) 164, 176, 486, 687, 702, 705
BlsI GCNGC 6 cut(s) 165, 177, 487, 688, 703, 706
BmeT110I CYCGRG 2 cut(s) 355, 737
BmiI GGNNCC 2 cut(s) 66, 287
BmsI GCATC 1 cut(s) 703
Bpu10I CCTNAGC 1 cut(s) 590
Bpu14I TTCGAA 1 cut(s) 81
BpuEI CTTGAG 2 cut(s) 84, 430
BsaJI CCNNGG 1 cut(s) 296
BsaXI ACNNNNNCTCC 4 cut(s) 333, 363, 542, 572
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse1I ACTGG 1 cut(s) 544
BseDI CCNNGG 1 cut(s) 296
BseGI GGATG 1 cut(s) 600
BseLI CCNNNNNNNGG 1 cut(s) 206
BseMII CTCAG 1 cut(s) 469
BseNI ACTGG 1 cut(s) 544
BseXI GCAGC 6 cut(s) 175, 187, 497, 673, 688, 716
Bsh1285I CGRYCG 1 cut(s) 226
BshNI GGYRCC 1 cut(s) 64
BsiEI CGRYCG 1 cut(s) 226
BsiHKAI GWGCWC 2 cut(s) 258, 454
BsiHKCI CYCGRG 2 cut(s) 355, 737
BslFI GGGAC 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 206
BsmAI GTCTC 2 cut(s) 86, 446
BsmFI GGGAC 1 cut(s) 122
BsmI GAATGC 1 cut(s) 213
BsoBI CYCGRG 2 cut(s) 355, 737
Bsp119I TTCGAA 1 cut(s) 81
Bsp1286I GDGCHC 3 cut(s) 37, 258, 454
Bsp1407I TGTACA 2 cut(s) 128, 607
Bsp143I GATC 3 cut(s) 223, 285, 580
BspCNI CTCAG 1 cut(s) 468
BspLI GGNNCC 2 cut(s) 66, 287
BspMAI CTGCAG 2 cut(s) 496, 706
BspMI ACCTGC 1 cut(s) 731
BspPI GGATC 3 cut(s) 280, 293, 575
BspT104I TTCGAA 1 cut(s) 81
BspT107I GGYRCC 1 cut(s) 64
BsrGI TGTACA 2 cut(s) 128, 607
BsrI ACTGG 1 cut(s) 544
BssECI CCNNGG 1 cut(s) 296
BssMI GATC 3 cut(s) 223, 285, 580
BssT1I CCWWGG 1 cut(s) 296
Bst4CI ACNGT 2 cut(s) 78, 436
Bst6I CTCTTC 1 cut(s) 84
BstAPI GCANNNNNTGC 1 cut(s) 491
BstAUI TGTACA 2 cut(s) 128, 607
BstBI TTCGAA 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 47
BstDEI CTNAG 3 cut(s) 386, 455, 590
BstF5I GGATG 1 cut(s) 600
BstKTI GATC 3 cut(s) 226, 288, 583
BstMAI GTCTC 2 cut(s) 86, 446
BstMBI GATC 3 cut(s) 223, 285, 580
BstMCI CGRYCG 1 cut(s) 226
BstMWI GCNNNNNNNGC 5 cut(s) 172, 219, 242, 491, 569
BstNSI RCATGY 2 cut(s) 49, 62
BstSFI CTRYAG 4 cut(s) 426, 492, 702, 708
BstV1I GCAGC 6 cut(s) 175, 187, 497, 673, 688, 716
BstX2I RGATCY 2 cut(s) 285, 580
BstYI RGATCY 2 cut(s) 285, 580
BtsCI GGATG 1 cut(s) 600
BveI ACCTGC 1 cut(s) 731
Cac8I GCNNGC 1 cut(s) 47
CaiI CAGNNNCTG 2 cut(s) 491, 517
Csp6I GTAC 5 cut(s) 15, 56, 129, 608, 638
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviAII CATG 8 cut(s) 46, 50, 59, 189, 290, 481, 683, 690
CviQI GTAC 5 cut(s) 15, 56, 129, 608, 638
DdeI CTNAG 3 cut(s) 386, 455, 590
DpnI GATC 3 cut(s) 225, 287, 582
DpnII GATC 3 cut(s) 223, 285, 580
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
Eco130I CCWWGG 1 cut(s) 296
Eco24I GRGCYC 1 cut(s) 37
Eco88I CYCGRG 2 cut(s) 355, 737
EcoT14I CCWWGG 1 cut(s) 296
EcoT22I ATGCAT 1 cut(s) 51
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 296
FaeI CATG 8 cut(s) 49, 53, 62, 192, 293, 484, 686, 693
FaqI GGGAC 1 cut(s) 122
FatI CATG 8 cut(s) 45, 49, 58, 188, 289, 480, 682, 689
Fnu4HI GCNGC 6 cut(s) 164, 176, 486, 687, 702, 705
FokI GGATG 1 cut(s) 607
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 6 cut(s) 164, 176, 486, 687, 702, 705
FspBI CTAG 2 cut(s) 38, 69
GluI GCNGC 6 cut(s) 164, 176, 486, 687, 702, 705
Hin1II CATG 8 cut(s) 49, 53, 62, 192, 293, 484, 686, 693
HindIII AAGCTT 1 cut(s) 731
HinfI GANTC 4 cut(s) 4, 22, 83, 304
Hpy166II GTNNAC 3 cut(s) 74, 610, 638
Hpy188I TCNGA 3 cut(s) 88, 458, 519
Hpy188III TCNNGA 5 cut(s) 101, 375, 447, 584, 737
Hpy8I GTNNAC 3 cut(s) 74, 610, 638
HpyAV CCTTC 1 cut(s) 689
HpyCH4III ACNGT 2 cut(s) 78, 436
HpyCH4V TGCA 9 cut(s) 49, 163, 213, 236, 494, 650, 689, 704, 726
HpyF10VI GCNNNNNNNGC 5 cut(s) 172, 219, 242, 491, 569
HpyF3I CTNAG 3 cut(s) 386, 455, 590
Hsp92II CATG 8 cut(s) 49, 53, 62, 192, 293, 484, 686, 693
Kzo9I GATC 3 cut(s) 223, 285, 580
LpnPI CCDG 7 cut(s) 23, 191, 524, 525, 597, 679, 736
Lsp1109I GCAGC 6 cut(s) 175, 187, 497, 673, 688, 716
LweI GCATC 1 cut(s) 703
MaeI CTAG 2 cut(s) 38, 69
MaeIII GTNAC 2 cut(s) 227, 349
MalI GATC 3 cut(s) 225, 287, 582
MboI GATC 3 cut(s) 223, 285, 580
MboII GAAGA 2 cut(s) 101, 313
MflI RGATCY 2 cut(s) 285, 580
MhlI GDGCHC 3 cut(s) 37, 258, 454
MluCI AATT 4 cut(s) 151, 328, 336, 473
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 325
MnlI CCTC 5 cut(s) 34, 364, 371, 525, 544
Mph1103I ATGCAT 1 cut(s) 51
MseI TTAA 3 cut(s) 249, 335, 575
MslI CAYNNNNRTG 1 cut(s) 187
MspA1I CMGCKG 3 cut(s) 245, 530, 707
Mva1269I GAATGC 1 cut(s) 213
MwoI GCNNNNNNNGC 5 cut(s) 172, 219, 242, 491, 569
NdeII GATC 3 cut(s) 223, 285, 580
NlaIII CATG 8 cut(s) 49, 53, 62, 192, 293, 484, 686, 693
NlaIV GGNNCC 2 cut(s) 66, 287
NsiI ATGCAT 1 cut(s) 51
NspI RCATGY 2 cut(s) 49, 62
NspV TTCGAA 1 cut(s) 81
PaeI GCATGC 1 cut(s) 49
PaeR7I CTCGAG 2 cut(s) 355, 737
PaqCI CACCTGC 1 cut(s) 731
PciI ACATGT 1 cut(s) 58
PctI GAATGC 1 cut(s) 213
PfeI GAWTC 3 cut(s) 22, 83, 304
PkrI GCNGC 6 cut(s) 165, 177, 487, 688, 703, 706
Ple19I CGATCG 1 cut(s) 226
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PscI ACATGT 1 cut(s) 58
PshBI ATTAAT 1 cut(s) 335
PspN4I GGNNCC 2 cut(s) 66, 287
PspXI VCTCGAGB 1 cut(s) 355
PstI CTGCAG 2 cut(s) 496, 706
PstNI CAGNNNCTG 2 cut(s) 491, 517
PsuI RGATCY 2 cut(s) 285, 580
PvuI CGATCG 1 cut(s) 226
PvuII CAGCTG 3 cut(s) 245, 530, 707
RsaI GTAC 5 cut(s) 16, 57, 130, 609, 639
RsaNI GTAC 5 cut(s) 15, 56, 129, 608, 638
RseI CAYNNNNRTG 1 cut(s) 187
SaqAI TTAA 3 cut(s) 249, 335, 575
SatI GCNGC 6 cut(s) 164, 176, 486, 687, 702, 705
Sau3AI GATC 3 cut(s) 223, 285, 580
SchI GAGTC 1 cut(s) 13
SduI GDGCHC 3 cut(s) 37, 258, 454
SfaNI GCATC 1 cut(s) 703
SfcI CTRYAG 4 cut(s) 426, 492, 702, 708
Sfr274I CTCGAG 2 cut(s) 355, 737
SfuI TTCGAA 1 cut(s) 81
SlaI CTCGAG 2 cut(s) 355, 737
SmiMI CAYNNNNRTG 1 cut(s) 187
SmlI CTYRAG 4 cut(s) 99, 355, 445, 737
SmoI CTYRAG 4 cut(s) 99, 355, 445, 737
SphI GCATGC 1 cut(s) 49
Sse9I AATT 4 cut(s) 151, 328, 336, 473
SspMI CTAG 2 cut(s) 38, 69
StyI CCWWGG 1 cut(s) 296
TaaI ACNGT 2 cut(s) 78, 436
TaqI TCGA 3 cut(s) 81, 356, 738
TasI AATT 4 cut(s) 151, 328, 336, 473
TatI WGTACW 4 cut(s) 14, 128, 607, 637
TfiI GAWTC 3 cut(s) 22, 83, 304
Tru1I TTAA 3 cut(s) 249, 335, 575
Tru9I TTAA 3 cut(s) 249, 335, 575
TseI GCWGC 6 cut(s) 163, 175, 485, 686, 701, 704
TspDTI ATGAA 5 cut(s) 262, 321, 477, 524, 671
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 1 cut(s) 151
XceI RCATGY 2 cut(s) 49, 62
XhoI CTCGAG 2 cut(s) 355, 737
XspI CTAG 2 cut(s) 38, 69
Zsp2I ATGCAT 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.