Rroxscaffold_1G00070650

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000099
Physical Location & Seq
Forward (+)
91574788 .. 91578649
3862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070650.1

Sequence Viewer

Length: 2232 bp
ATGAATCCTACTGATATCAGCATATTAATCATCTTTCTTCTTCTTCCTCCTCCCTGTTGCATTGCCTCTGATGCCGTTACTCCAAATCAGCCCATTAGAGACGGCGACATTCTTATCTCTACCGGAAAAAAGTTTGCACTCGGCTTCTTTAGCCCAGGAAATTCTCGCAAGCGTTATGTTGGAGTTTGGTATAACAATGTTCCAAACCGAACCATTGTCTGGGTTGCAAACAGAGACAATCCAGTCAATGATACCTCTGGACACCTAGCAGTCCAAGGAAATGGAGGTCTTGTCATCTACGGAAAGAACCAAAGTAACCCTCTTTGGTCCGCTAGTGTTACTCTTTCTTCACCAAACAATTCTATTGCCAAGCTTTTTGATACAGGAAATCTTGTTTTGCTTGAGAATGAGAGCCAAAAGCTAGTTTTGCACCAAGGTGGAGCTCCCCGGTGGCGGACTCTAATCGGATTTTGGGCCGGGCAGAGATGGAGGGGTACGGTGAGTTACATCAACAATCAAGATGAGGTTTCCATAATGTATGTTCCGGCCAATGATTCAGCTTTATCAAGGACTATGCTAGCCGAATCAGGAACCTTGGAACGGTCTTCATGGAATGACCGAGTACATGAATGGAACATGTACTGGTCTGCTCCGATAGAGCGTTGTGATATTTATGGACAGTGCGGCCCAAATGGCAACTGCAACCCATACAATGTGAATGCCATCGATTGCAATTGCTTACCCGGTTATGAACCAAAGTCACCAACTGATTGGTACCTGAGAGAAGGATCAGGTGGGTGCTTAAGGAGAAAAGGAGTGTCAATGTGTGGAAATGGGGAAGGATTTGTAAAGGTTGAGCGTGTAAAAATACCAGACTTGTCGAAGGCATCTTTCGACATGAACTTGAATTTGGAGGAATGTGAGCAAGTGTGCTTGAGAAATTGTTCTTGCACGGCATACTCGAGTTCCGATGAGGGCAGCGGATGTGTGACTTGGCAAGGGGATTTGATGGACATAAGAACGCTTCCTGATGCTGGTCAAGTATTATATGCAAGAGTCGATGCAATTGTTTTAGCTCAATATGCGAAGAAGTCGGATGATTCTCTTAGCAAGAAGCAGAAAGTAGCAGTTTCGCTAGCATCTGTTCTAGTGCTCTTTCTTGTGTTTTCTCTTTTGGTTTGGTTACTAAGGAGGAAGAGAAAAGGTAAAAGGAGACAAAATGAATATCTATTTGGACATAGTACAGGGTCAACGTACTTGGGGCAATCTAGTGGTAGAACAGATGCTGATGAAACTAGGATTAACCCAGATCTACCATTCTTTGATCTAACAACCGTAGCAGCAGCAACAAATAATTTCTCTATATTGAAAACAAGCTTGGAACAGGGTGTGCTTTCTAATGGAAAGGAAATAGCAGTCAAAAGACTATCGCAGAATTCAGGCCAAGGAACCGAAGAATTCAAGAATGAAGTTGTGTTGATTTCAAAACTCCAACACAGGAACCTTGTCAGAATTTTAGGTTGTTGTGTTCAAGATGAAGAGAAGATGATAATCTATGAATACTTGCCAAACAAAAGTTTGGACTTCTTCATTTTTAATGAATCCAACAGAGTTTATTTAGATTGGACCAGACGCTTTGAGATAATTTGTGGAATTGTTAGAGGGATCTTGTATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCCAGCAATGTTCTACTAGACGCTTCTATGAATCCCAAAATTGCAGATTTTGTGGTTATATGTCACCCAGAATATGCAATGCGAGGACAGTTTTCAGTAAAATCGGATGTCTATAGTTTTGGGGTTTTACTACTAGAAATCATTACAGGCAGAAAGAACAGAGTTTATTACCAAGAGGAATCTCCCGACTCAAATTTGGTCGAACATGTTTGGAACTTGTGGCGAGAAAGTAATGCCTTGGAAGTCGTTGATTCATCTCTGGGTGAATCATACCCCACGAATGAAGTTCTGAGATGTATCCAAATTGCTCTCTTGTGTGTGCAAGAGTATGCAATTGACCGGCCAACCATGTCGGCAGTTCTTTTCATGTTAGGTAATGATGCAACACTTCCTTCACCTAGACAACCTGCATTTCTATTGCAGAGAAGTGCCACTAGTACTGGAGACTCATCAACCCGAGATGGAGCTAGTTCTGTAAATGATGTGACATGTACTGTGGTAGAAGCTCGCTAG

Protein Analysis

743

Amino Acids

82.95

Weight (kDa)

6.55

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 145 7.7e-18 D-mannose binding lectin
S_locus_glycop PF00954 167 - 254 2.6e-21 S-locus glycoprotein domain
PAN_2 PF08276 276 - 339 6.3e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 465 - 591 4.3e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 466 - 625 2e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 595 - 694 5.8e-07 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 699 - 743 2.5e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 2134
Acc65I GGTACC 1 cut(s) 774
AccB1I GGYRCC 1 cut(s) 774
AccB7I CCANNNNNTGG 1 cut(s) 219
AciI CCGC 4 cut(s) 330, 454, 684, 981
AclWI GGATC 2 cut(s) 796, 1673
AcoI YGGCCR 2 cut(s) 546, 2060
AcsI RAATTY 6 cut(s) 160, 907, 1435, 1457, 1512, 1912
AfaI GTAC 8 cut(s) 496, 624, 641, 776, 1243, 1256, 2158, 2212
AfiI CCNNNNNNNGG 4 cut(s) 219, 453, 600, 1034
AflII CTTAAG 1 cut(s) 802
AflIII ACRYGT 3 cut(s) 636, 1924, 2207
AgsI TTSAA 6 cut(s) 907, 1369, 1462, 1485, 1532, 1689
AhlI ACTAGT 1 cut(s) 2153
AjnI CCWGG 1 cut(s) 154
AjuI GAANNNNNNNTTGG 6 cut(s) 893, 925, 1215, 1247, 1361, 1393
AleI CACNNNNGTG 1 cut(s) 435
AluBI AGCT 8 cut(s) 373, 421, 443, 560, 1076, 1377, 2186, 2225
AluI AGCT 8 cut(s) 373, 421, 443, 560, 1076, 1377, 2186, 2225
Alw21I GWGCWC 2 cut(s) 445, 1155
Alw26I GTCTC 4 cut(s) 93, 228, 1207, 2157
AlwI GGATC 2 cut(s) 796, 1673
AlwNI CAGNNNCTG 1 cut(s) 1286
Ama87I CYCGRG 2 cut(s) 961, 2175
AoxI GGCC 6 cut(s) 474, 546, 685, 1441, 1719, 2060
ApeKI GCWGC 3 cut(s) 978, 1340, 1343
ApoI RAATTY 6 cut(s) 160, 907, 1435, 1457, 1512, 1912
AseI ATTAAT 1 cut(s) 26
Asp700I GAANNNNTTC 1 cut(s) 943
Asp718I GGTACC 1 cut(s) 774
AspS9I GGNCC 4 cut(s) 327, 474, 686, 1626
AsuC2I CCSGG 3 cut(s) 448, 478, 744
AsuHPI GGTGA 6 cut(s) 342, 511, 753, 1775, 1994, 2106
AsuNHI GCTAGC 2 cut(s) 577, 1135
AvaI CYCGRG 2 cut(s) 961, 2175
AvaII GGWCC 2 cut(s) 327, 1626
BanI GGYRCC 1 cut(s) 774
BanII GRGCYC 1 cut(s) 445
BbsI GAAGAC 1 cut(s) 597
Bbv12I GWGCWC 2 cut(s) 445, 1155
BbvI GCAGC 3 cut(s) 990, 1352, 1355
BccI CCATC 4 cut(s) 480, 731, 1003, 2174
BceAI ACGGC 3 cut(s) 59, 118, 969
BciT130I CCWGG 1 cut(s) 156
BciVI GTATCC 1 cut(s) 2027
BcnI CCSGG 3 cut(s) 448, 478, 744
BcoDI GTCTC 4 cut(s) 93, 228, 1207, 2157
BcuI ACTAGT 1 cut(s) 2153
BfmI CTRYAG 1 cut(s) 1831
BfrI CTTAAG 1 cut(s) 802
BfuAI ACCTGC 1 cut(s) 2134
BfuI GTATCC 1 cut(s) 2027
BglI GCCNNNNNGGC 1 cut(s) 693
BglII AGATCT 2 cut(s) 1309, 1711
BisI GCNGC 4 cut(s) 685, 979, 1341, 1344
BlsI GCNGC 4 cut(s) 686, 980, 1342, 1345
BmcAI AGTACT 1 cut(s) 2158
Bme1390I CCNGG 4 cut(s) 156, 448, 478, 744
Bme18I GGWCC 2 cut(s) 327, 1626
BmeT110I CYCGRG 2 cut(s) 961, 2175
BmgT120I GGNCC 4 cut(s) 327, 474, 686, 1626
BmiI GGNNCC 4 cut(s) 592, 776, 1450, 1502
BmrFI CCNGG 4 cut(s) 156, 448, 478, 744
BmsI GCATC 7 cut(s) 61, 896, 1021, 1051, 1148, 1273, 2089
BmtI GCTAGC 2 cut(s) 581, 1139
BpiI GAAGAC 1 cut(s) 597
BpmI CTGGAG 1 cut(s) 2181
BpuEI CTTGAG 2 cut(s) 422, 955
BpuMI CCSGG 3 cut(s) 448, 478, 744
Bsa29I ATCGAT 1 cut(s) 726
BsaBI GATNNNNATC 1 cut(s) 1550
BsaJI CCNNGG 7 cut(s) 154, 274, 433, 446, 594, 1444, 1956
BsaWI WCCGGW 1 cut(s) 122
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 453, 600, 1034
Bse118I RCCGGY 1 cut(s) 2058
Bse1I ACTGG 3 cut(s) 242, 647, 2164
Bse3DI GCAATG 3 cut(s) 60, 1732, 1803
Bse8I GATNNNNATC 1 cut(s) 1550
BseBI CCWGG 1 cut(s) 156
BseCI ATCGAT 1 cut(s) 726
BseDI CCNNGG 7 cut(s) 154, 274, 433, 446, 594, 1444, 1956
BseGI GGATG 4 cut(s) 989, 1102, 1701, 1831
BseJI GATNNNNATC 1 cut(s) 1550
BseLI CCNNNNNNNGG 4 cut(s) 219, 453, 600, 1034
BseMI GCAATG 3 cut(s) 60, 1732, 1803
BseMII CTCAG 2 cut(s) 770, 2000
BseNI ACTGG 3 cut(s) 242, 647, 2164
BseRI GAGGAG 1 cut(s) 39
BseXI GCAGC 3 cut(s) 990, 1352, 1355
BshFI GGCC 6 cut(s) 476, 548, 687, 1443, 1721, 2062
BshNI GGYRCC 1 cut(s) 774
BshVI ATCGAT 1 cut(s) 726
BsiHKAI GWGCWC 2 cut(s) 445, 1155
BsiHKCI CYCGRG 2 cut(s) 961, 2175
BsiSI CCGG 6 cut(s) 123, 448, 477, 545, 744, 2059
BslI CCNNNNNNNGG 4 cut(s) 219, 453, 600, 1034
BsmAI GTCTC 4 cut(s) 93, 228, 1207, 2157
BsmBI CGTCTC 1 cut(s) 93
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 6 cut(s) 476, 548, 687, 1443, 1721, 2062
BsoBI CYCGRG 2 cut(s) 961, 2175
Bsp1286I GDGCHC 2 cut(s) 445, 1155
Bsp143I GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
BspACI CCGC 4 cut(s) 330, 454, 684, 981
BspANI GGCC 6 cut(s) 476, 548, 687, 1443, 1721, 2062
BspCNI CTCAG 2 cut(s) 771, 2001
BspDI ATCGAT 1 cut(s) 726
BspLI GGNNCC 4 cut(s) 592, 776, 1450, 1502
BspMI ACCTGC 1 cut(s) 2134
BspOI GCTAGC 2 cut(s) 581, 1139
BspPI GGATC 2 cut(s) 796, 1673
BspT107I GGYRCC 1 cut(s) 774
BspTI CTTAAG 1 cut(s) 802
BsrDI GCAATG 3 cut(s) 60, 1732, 1803
BsrFI RCCGGY 1 cut(s) 2058
BsrI ACTGG 3 cut(s) 242, 647, 2164
BssAI RCCGGY 1 cut(s) 2058
BssECI CCNNGG 7 cut(s) 154, 274, 433, 446, 594, 1444, 1956
BssMI GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
BssT1I CCWWGG 5 cut(s) 274, 433, 594, 1444, 1956
Bst2UI CCWGG 1 cut(s) 156
Bst4CI ACNGT 6 cut(s) 499, 603, 681, 1336, 1809, 2215
Bst6I CTCTTC 2 cut(s) 1190, 1533
BstAFI CTTAAG 1 cut(s) 802
BstC8I GCNNGC 5 cut(s) 170, 579, 1137, 1723, 2227
BstDEI CTNAG 4 cut(s) 779, 1106, 1187, 2009
BstF5I GGATG 4 cut(s) 989, 1102, 1701, 1831
BstKTI GATC 5 cut(s) 791, 1312, 1327, 1668, 1714
BstMAI GTCTC 4 cut(s) 93, 228, 1207, 2157
BstMBI GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
BstMWI GCNNNNNNNGC 5 cut(s) 71, 150, 427, 693, 1082
BstNI CCWGG 1 cut(s) 156
BstNSI RCATGY 3 cut(s) 640, 1928, 2211
BstSCI CCNGG 4 cut(s) 154, 446, 476, 742
BstSFI CTRYAG 1 cut(s) 1831
BstV1I GCAGC 3 cut(s) 990, 1352, 1355
BstV2I GAAGAC 1 cut(s) 597
BstX2I RGATCY 3 cut(s) 1309, 1665, 1711
BstXI CCANNNNNNTGG 2 cut(s) 281, 771
BstYI RGATCY 3 cut(s) 1309, 1665, 1711
Bsu15I ATCGAT 1 cut(s) 726
BsuI GTATCC 1 cut(s) 2027
BsuRI GGCC 6 cut(s) 476, 548, 687, 1443, 1721, 2062
BsuTUI ATCGAT 1 cut(s) 726
BtsCI GGATG 4 cut(s) 989, 1102, 1701, 1831
BtsIMutI CAGTG 1 cut(s) 686
BveI ACCTGC 1 cut(s) 2134
Cac8I GCNNGC 5 cut(s) 170, 579, 1137, 1723, 2227
CaiI CAGNNNCTG 1 cut(s) 1286
Cfr10I RCCGGY 1 cut(s) 2058
Cfr13I GGNCC 4 cut(s) 327, 474, 686, 1626
ClaI ATCGAT 1 cut(s) 726
CseI GACGC 2 cut(s) 1641, 1748
Csp6I GTAC 8 cut(s) 495, 623, 640, 775, 1242, 1255, 2157, 2211
CviAII CATG 8 cut(s) 609, 626, 637, 898, 1925, 2068, 2086, 2208
CviQI GTAC 8 cut(s) 495, 623, 640, 775, 1242, 1255, 2157, 2211
DdeI CTNAG 4 cut(s) 779, 1106, 1187, 2009
DpnI GATC 5 cut(s) 790, 1311, 1326, 1667, 1713
DpnII GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 2 cut(s) 546, 2060
Eam1104I CTCTTC 2 cut(s) 1190, 1533
EarI CTCTTC 2 cut(s) 1190, 1533
EciI GGCGGA 1 cut(s) 469
Ecl136II GAGCTC 1 cut(s) 443
Eco130I CCWWGG 5 cut(s) 274, 433, 594, 1444, 1956
Eco24I GRGCYC 1 cut(s) 445
Eco32I GATATC 1 cut(s) 16
Eco47I GGWCC 2 cut(s) 327, 1626
Eco53kI GAGCTC 1 cut(s) 443
Eco88I CYCGRG 2 cut(s) 961, 2175
EcoICRI GAGCTC 1 cut(s) 443
EcoRI GAATTC 2 cut(s) 1435, 1457
EcoRII CCWGG 1 cut(s) 154
EcoRV GATATC 1 cut(s) 16
EcoT14I CCWWGG 5 cut(s) 274, 433, 594, 1444, 1956
EcoT38I GRGCYC 1 cut(s) 445
ErhI CCWWGG 5 cut(s) 274, 433, 594, 1444, 1956
Esp3I CGTCTC 1 cut(s) 93
FaeI CATG 8 cut(s) 612, 629, 640, 901, 1928, 2071, 2089, 2211
FatI CATG 8 cut(s) 608, 625, 636, 897, 1924, 2067, 2085, 2207
Fnu4HI GCNGC 4 cut(s) 685, 979, 1341, 1344
FokI GGATG 4 cut(s) 996, 1109, 1688, 1838
FriOI GRGCYC 1 cut(s) 445
Fsp4HI GCNGC 4 cut(s) 685, 979, 1341, 1344
GluI GCNGC 4 cut(s) 685, 979, 1341, 1344
GsuI CTGGAG 1 cut(s) 2181
HaeIII GGCC 6 cut(s) 476, 548, 687, 1443, 1721, 2062
HapII CCGG 6 cut(s) 123, 448, 477, 545, 744, 2059
HgaI GACGC 2 cut(s) 1641, 1748
Hin1II CATG 8 cut(s) 612, 629, 640, 901, 1928, 2071, 2089, 2211
HincII GTYRAC 1 cut(s) 1251
HindII GTYRAC 1 cut(s) 1251
HindIII AAGCTT 2 cut(s) 371, 1375
HpaII CCGG 6 cut(s) 123, 448, 477, 545, 744, 2059
HphI GGTGA 6 cut(s) 342, 511, 753, 1775, 1994, 2106
Hpy166II GTNNAC 1 cut(s) 1251
Hpy188I TCNGA 8 cut(s) 70, 467, 654, 970, 1096, 1511, 1825, 2010
Hpy188III TCNNGA 9 cut(s) 258, 518, 588, 1028, 1462, 1532, 1682, 1689, 1904
Hpy8I GTNNAC 1 cut(s) 1251
HpyAV CCTTC 4 cut(s) 779, 833, 877, 2121
HpyCH4III ACNGT 6 cut(s) 499, 603, 681, 1336, 1809, 2215
HpyCH4IV ACGT 1 cut(s) 1253
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 150, 427, 693, 1082
HpyF3I CTNAG 4 cut(s) 779, 1106, 1187, 2009
HpySE526I ACGT 1 cut(s) 1253
Hsp92II CATG 8 cut(s) 612, 629, 640, 901, 1928, 2071, 2089, 2211
KpnI GGTACC 1 cut(s) 778
Kzo9I GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
LmnI GCTCC 4 cut(s) 440, 448, 655, 2183
Lsp1109I GCAGC 3 cut(s) 990, 1352, 1355
LweI GCATC 7 cut(s) 61, 896, 1021, 1051, 1148, 1273, 2089
MaeII ACGT 1 cut(s) 1253
MaeIII GTNAC 9 cut(s) 76, 314, 337, 503, 759, 988, 1182, 1781, 2203
MalI GATC 5 cut(s) 790, 1311, 1326, 1667, 1713
MboI GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
MfeI CAATTG 3 cut(s) 733, 1065, 2052
MflI RGATCY 3 cut(s) 1309, 1665, 1711
MhlI GDGCHC 2 cut(s) 445, 1155
MlyI GAGTC 4 cut(s) 451, 1065, 1901, 2159
MmeI TCCRAC 4 cut(s) 160, 1074, 1516, 1629
MroXI GAANNNNTTC 1 cut(s) 943
MseI TTAA 5 cut(s) 26, 803, 1302, 1596, 1694
MslI CAYNNNNRTG 1 cut(s) 435
MspA1I CMGCKG 1 cut(s) 981
MspCI CTTAAG 1 cut(s) 802
MspI CCGG 6 cut(s) 123, 448, 477, 545, 744, 2059
MspR9I CCNGG 4 cut(s) 156, 448, 478, 744
MunI CAATTG 3 cut(s) 733, 1065, 2052
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 1 cut(s) 156
MwoI GCNNNNNNNGC 5 cut(s) 71, 150, 427, 693, 1082
NciI CCSGG 3 cut(s) 448, 478, 744
NdeII GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
NheI GCTAGC 2 cut(s) 577, 1135
NlaIII CATG 8 cut(s) 612, 629, 640, 901, 1928, 2071, 2089, 2211
NlaIV GGNNCC 4 cut(s) 592, 776, 1450, 1502
NmeAIII GCCGAG 1 cut(s) 120
NmuCI GTSAC 4 cut(s) 759, 988, 1781, 2203
NspI RCATGY 3 cut(s) 640, 1928, 2211
OliI CACNNNNGTG 1 cut(s) 435
PaeR7I CTCGAG 1 cut(s) 961
PciI ACATGT 3 cut(s) 636, 1924, 2207
PcsI WCGNNNNNNNCGW 1 cut(s) 959
PctI GAATGC 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 943
PflMI CCANNNNNTGG 1 cut(s) 219
PkrI GCNGC 4 cut(s) 686, 980, 1342, 1345
PleI GAGTC 4 cut(s) 451, 1064, 1901, 2159
PpsI GAGTC 4 cut(s) 451, 1064, 1901, 2159
PscI ACATGT 3 cut(s) 636, 1924, 2207
PshBI ATTAAT 1 cut(s) 26
Psp124BI GAGCTC 1 cut(s) 445
Psp6I CCWGG 1 cut(s) 154
PspGI CCWGG 1 cut(s) 154
PspN4I GGNNCC 4 cut(s) 592, 776, 1450, 1502
PspPI GGNCC 4 cut(s) 327, 474, 686, 1626
PspXI VCTCGAGB 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 1286
PsuI RGATCY 3 cut(s) 1309, 1665, 1711
RsaI GTAC 8 cut(s) 496, 624, 641, 776, 1243, 1256, 2158, 2212
RsaNI GTAC 8 cut(s) 495, 623, 640, 775, 1242, 1255, 2157, 2211
RseI CAYNNNNRTG 1 cut(s) 435
SacI GAGCTC 1 cut(s) 445
SaqAI TTAA 5 cut(s) 26, 803, 1302, 1596, 1694
SatI GCNGC 4 cut(s) 685, 979, 1341, 1344
Sau3AI GATC 5 cut(s) 788, 1309, 1324, 1665, 1711
Sau96I GGNCC 4 cut(s) 327, 474, 686, 1626
ScaI AGTACT 1 cut(s) 2158
SchI GAGTC 4 cut(s) 451, 1065, 1901, 2159
ScrFI CCNGG 4 cut(s) 156, 448, 478, 744
SduI GDGCHC 2 cut(s) 445, 1155
SfaNI GCATC 7 cut(s) 61, 896, 1021, 1051, 1148, 1273, 2089
SfcI CTRYAG 1 cut(s) 1831
Sfr274I CTCGAG 1 cut(s) 961
SinI GGWCC 2 cut(s) 327, 1626
SlaI CTCGAG 1 cut(s) 961
SmiMI CAYNNNNRTG 1 cut(s) 435
SmlI CTYRAG 4 cut(s) 401, 802, 934, 961
SmoI CTYRAG 4 cut(s) 401, 802, 934, 961
SpeI ACTAGT 1 cut(s) 2153
SsiI CCGC 4 cut(s) 330, 454, 684, 981
SstI GAGCTC 1 cut(s) 445
StyD4I CCNGG 4 cut(s) 154, 446, 476, 742
StyI CCWWGG 5 cut(s) 274, 433, 594, 1444, 1956
TaaI ACNGT 6 cut(s) 499, 603, 681, 1336, 1809, 2215
TaiI ACGT 1 cut(s) 1256
TaqI TCGA 6 cut(s) 726, 881, 894, 962, 1059, 1920
TaqII GACCGA 1 cut(s) 633
TatI WGTACW 5 cut(s) 622, 639, 1241, 2156, 2210
TauI GCSGC 1 cut(s) 687
Tru1I TTAA 5 cut(s) 26, 803, 1302, 1596, 1694
Tru9I TTAA 5 cut(s) 26, 803, 1302, 1596, 1694
TscAI CASTG 1 cut(s) 686
TseFI GTSAC 4 cut(s) 759, 988, 1781, 2203
TseI GCWGC 3 cut(s) 978, 1340, 1343
Tsp45I GTSAC 4 cut(s) 759, 988, 1781, 2203
TspGWI ACGGA 1 cut(s) 315
TspRI CASTG 1 cut(s) 686
Van91I CCANNNNNTGG 1 cut(s) 219
Vha464I CTTAAG 1 cut(s) 802
VpaK11BI GGWCC 2 cut(s) 327, 1626
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 6 cut(s) 160, 907, 1435, 1457, 1512, 1912
XceI RCATGY 3 cut(s) 640, 1928, 2211
XhoI CTCGAG 1 cut(s) 961
XmnI GAANNNNTTC 1 cut(s) 943
ZrmI AGTACT 1 cut(s) 2158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.