Rroxscaffold_1G00070750

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000099
Physical Location & Seq
Forward (+)
91684360 .. 91687894
3535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070750.1

Sequence Viewer

Length: 2391 bp
ATGAATTCTAGTCAATATTGGTCTAAGATCACTGCATTGCTCATCTTTCTTCTTCATCTCCCCTCTTGCATTTCCATTGATTCCATTACATCAAACCAAACCATCAAAGACGGCGACGTTTTAGTCTCGAGCAGAAAGCGCTTTGCACTTGGGTTCTTCAGCCCTGGAAATTCTGGCAAACGTTATGTTGGAGTTTGGTATAACAAAGTTCCGGAGCAGACCATTGTTTGGGTTGCAAATAGAGACAACCCTGTGAATGATACCTCTGGAGTTTTAGTGATTGATGGAGATGGAGGCCTTGTCATATATGGAAAGGACAGAACAATCCCTCTTTGGTCTACTAATGTTACTCTCTCTTCTCCAAAATATTCCATGGCCAAGCTGCTGGATACAGGAAATTTTGTTTTGTTTGAGAATGGAAGCCAGAGGGTTTTGTGGGAAGGGTTTGATTATCCCTCAAATACAATGCTTCCATTTATGAAAATTGGGCTGAACCGGCGGTCCGGGTTCAACCGGTTCCTAACTTCTTGGAAATCTCAAGATGACCCGGGAACGGGAAATTGTTCATATAGGATTGATCCAAATGGGTTTCCGCAGCTGTTTTTGTACAAGGGTCAAGCTCGCTGGTGGCGCGCCGGATCTTGGATCGGGCACAGATGGAGTGGTGTCCCCGAAATGACTCCAAATTTCATCTTCAACGTCAGTTTTTTGAACAATCAAGATGAGTTATCCATCATGTATGGTATTACCGACGACTCAATCTTCTCAAGGATGGTGCTTGATGAATCGGGAATCATTGAACGGTCCACGTGGCATGATCAGGTACACCAATGGATCAAGTTTTGGTCTGCCCCGGTAGAGCTATGTGACAATTACGGAAAATGCGGTCCAAATAGCAACTGTGACCCTTACCGTGCTGATAAGTTCGAGTGTACATGCCTACCTGGGTTTGAACCTAAGTTGCTCCATGAATGGTACTTGAGAGATGGCTCGGGTGGGTGTGTGAGGAAAAAAGGAGTATCCGTGTGTCAAAACGGAGAAGGGTTCGTGAAGGTGTCACTAGTAAAGGCACCAGACTCATCTACTGCGCGTGTAAACTTGAACTTAGGTCTGAAAGAATGTGAAGAGGAATGCTTAAGAAATTGTTCTTGCATGGCATACTCGAATGCAGATGACTTGCAAGGAGGGAATGGATGTGTGACATGGTATGGGGACTTGATGGATACAAGGACTTATACGAATGCCGGTCAAGATTTATATGTTCGAGTTGATTCAATTGAATTAGGTAAGGAAAGACCAAATCTATTTTCATTTGGTGCCACACGTTCAATCTACTTGGAAAATTCTCCTTGTAGAACAGATCCTGATGATAGCGGATTAAAGTCAGATCTGCCTTTCTTTGATCTAAGCACCATATCTGCAGCCACAAAAAATTTCTCTAATTCTAACAGGCTTGGAGAAGGCGGTTTTGGCCCCGTTTATAGGGGAGTGCTTTCTAATGGAATAGAAATAGCCGTGAAAAGACTATGCAAGAATTCTGGCCAGGGAAATGAAGAGTTCAAGAATGAAGTGCTGCTGATTGCTAAACTTCAACACAGGAACCTTGTGAGAATGTTAGGTTATTGCGTTCAAGATGAAGAGAAGATGCTAATCTATGAATACCTGCCTAACAAAAGCCTGGACTCTTTCATTTTCAATGAAACAAAAAAGGCATTTCTAGATTGGGCAAGACGCTTGGAGATTATCTTTGGCATTGCTAGAGGGATCTTATATCTTCATCAAGATTCGAGATTAAGAATCATTCATAGAGACCTAAAGGCTAGCAATGTTCTACTGGACTATGATATGAACCCCAAAATTGCAGATTTTGGAATGGCAAGAATATTCGGAGCAAACCAAATTGAAGCAAATACAAATCGCGTAGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGATTGTTTTCGGTGAAGTCCGATGTATACAGTTTCGGTGTTTTGCTGCTAGAAATCATTACGGCGAAAGAACACCGGTTCTACTATGATAATCCCGATTCAAATTTGGTTGGACATGTTTGGGACTTGTGGAAAGAAGGCCGAGCCTCGGAAATCATCGACACATCTTTGGGTGAATCCTATCCCATAAGTGAAGTTCGACGGTGTATTCAAATCGCGCTTCTGTGTGTGCAAGAGTACGCAGACGACCGGCCGACCATGTCAAAAGTTGTGTCTGTGTTAGGCAATGATGCAGCTCTTCCTTCACCAAGAAAACCTGGATTTTTGTTGAAGAGAAGTAACTATACCAGTGGAGACCCCAGCACAAGTACTGGAGATGTTAATTCCATAAATTATGTTACATGCACTATAGTTGAAGCTCGCTAA

Protein Analysis

796

Amino Acids

89.59

Weight (kDa)

5.94

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 178 8.7e-33 D-mannose binding lectin
S_locus_glycop PF00954 210 - 320 8.1e-30 S-locus glycoprotein domain
PAN_2 PF08276 343 - 409 2.6e-20 PAN-like domain
Pkinase PF00069 480 - 746 9.6e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 482 - 749 8.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
Acc36I ACCTGC 1 cut(s) 1671
AccB1I GGYRCC 2 cut(s) 1069, 1316
AccB7I CCANNNNNTGG 1 cut(s) 228
AccI GTMKAC 2 cut(s) 338, 1992
AccII CGCG 4 cut(s) 633, 1090, 1920, 2183
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 5 cut(s) 499, 593, 885, 1374, 1464
AclI AACGTT 1 cut(s) 181
AclWI GGATC 6 cut(s) 572, 646, 653, 842, 1355, 1772
AcoI YGGCCR 3 cut(s) 375, 1540, 2216
AcsI RAATTY 8 cut(s) 4, 169, 397, 685, 1342, 1432, 1534, 2068
AcuI CTGAAG 1 cut(s) 142
AcvI CACGTG 1 cut(s) 810
AfaI GTAC 6 cut(s) 608, 825, 934, 977, 2204, 2335
AfeI AGCGCT 1 cut(s) 140
AfiI CCNNNNNNNGG 6 cut(s) 228, 553, 554, 642, 1482, 2113
AflII CTTAAG 1 cut(s) 1135
AflIII ACRYGT 2 cut(s) 1322, 2080
AgeI ACCGGT 2 cut(s) 513, 2040
AhlI ACTAGT 1 cut(s) 1060
AjnI CCWGG 5 cut(s) 163, 943, 1542, 1677, 2281
AjuI GAANNNNNNNTTGG 4 cut(s) 1291, 1323, 1452, 1484
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
AluBI AGCT 6 cut(s) 382, 598, 620, 862, 2261, 2384
AluI AGCT 6 cut(s) 382, 598, 620, 862, 2261, 2384
Alw26I GTCTC 4 cut(s) 130, 237, 1803, 2313
AlwI GGATC 6 cut(s) 572, 646, 653, 842, 1355, 1772
AlwNI CAGNNNCTG 1 cut(s) 1364
Ama87I CYCGRG 3 cut(s) 127, 547, 991
Aor13HI TCCGGA 1 cut(s) 211
Aor51HI AGCGCT 1 cut(s) 140
AoxI GGCC 6 cut(s) 295, 375, 1471, 1540, 2104, 2216
ApeKI GCWGC 6 cut(s) 382, 595, 1421, 1573, 2011, 2258
ApoI RAATTY 8 cut(s) 4, 169, 397, 685, 1342, 1432, 1534, 2068
ArsI GACNNNNNNTTYG 2 cut(s) 2222, 2254
AscI GGCGCGCC 1 cut(s) 631
AsiGI ACCGGT 2 cut(s) 513, 2040
Asp700I GAANNNNTTC 2 cut(s) 562, 1144
AspLEI GCGC 5 cut(s) 141, 633, 635, 1090, 2185
AspS9I GGNCC 4 cut(s) 501, 804, 887, 1472
AsuC2I CCSGG 4 cut(s) 505, 548, 549, 854
AsuHPI GGTGA 4 cut(s) 1938, 1990, 2150, 2262
AsuNHI GCTAGC 1 cut(s) 1820
AvaI CYCGRG 3 cut(s) 127, 547, 991
AvaII GGWCC 3 cut(s) 501, 804, 887
BaeGI GKGCMC 1 cut(s) 654
BalI TGGCCA 2 cut(s) 377, 1542
BanI GGYRCC 2 cut(s) 1069, 1316
BarI GAAGNNNNNNTAC 2 cut(s) 2293, 2325
BbrPI CACGTG 1 cut(s) 810
BbvI GCAGC 6 cut(s) 369, 607, 1433, 1560, 1998, 2270
BccI CCATC 8 cut(s) 110, 278, 284, 651, 740, 766, 980, 1213
BceAI ACGGC 3 cut(s) 127, 1499, 2043
BciT130I CCWGG 5 cut(s) 165, 945, 1544, 1679, 2283
BciVI GTATCC 3 cut(s) 382, 1030, 1216
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 4 cut(s) 505, 548, 549, 854
BcoDI GTCTC 4 cut(s) 130, 237, 1803, 2313
BcuI ACTAGT 1 cut(s) 1060
BfaI CTAG 6 cut(s) 9, 1061, 1718, 1758, 1821, 2015
BfmI CTRYAG 2 cut(s) 1419, 2373
BfoI RGCGCY 1 cut(s) 142
BfrI CTTAAG 1 cut(s) 1135
BfuAI ACCTGC 1 cut(s) 1671
BfuI GTATCC 3 cut(s) 382, 1030, 1216
BglII AGATCT 1 cut(s) 1387
BisI GCNGC 6 cut(s) 383, 596, 1422, 1574, 2012, 2259
BlsI GCNGC 6 cut(s) 384, 597, 1423, 1575, 2013, 2260
BmcAI AGTACT 1 cut(s) 2335
Bme1390I CCNGG 9 cut(s) 165, 505, 548, 549, 854, 945, 1544, 1679, 2283
Bme18I GGWCC 3 cut(s) 501, 804, 887
BmeT110I CYCGRG 3 cut(s) 127, 547, 991
BmgT120I GGNCC 4 cut(s) 501, 804, 887, 1472
BmiI GGNNCC 5 cut(s) 518, 1071, 1318, 1474, 1601
BmrFI CCNGG 9 cut(s) 165, 505, 548, 549, 854, 945, 1544, 1679, 2283
BmsI GCATC 2 cut(s) 1635, 2245
BmtI GCTAGC 1 cut(s) 1824
BpmI CTGGAG 2 cut(s) 288, 2358
BpuEI CTTGAG 3 cut(s) 522, 751, 1000
BpuMI CCSGG 4 cut(s) 505, 548, 549, 854
BsaAI YACGTR 1 cut(s) 810
BsaBI GATNNNNATC 1 cut(s) 1649
BsaI GGTCTC 2 cut(s) 1803, 2313
BsaJI CCNNGG 7 cut(s) 163, 372, 547, 852, 944, 1543, 2112
BsaWI WCCGGW 4 cut(s) 211, 513, 1948, 2040
BsaXI ACNNNNNCTCC 6 cut(s) 261, 285, 291, 315, 1008, 1038
Bsc4I CCNNNNNNNGG 6 cut(s) 228, 553, 554, 642, 1482, 2113
Bse118I RCCGGY 5 cut(s) 495, 513, 1244, 2040, 2214
Bse1I ACTGG 3 cut(s) 1839, 2313, 2341
Bse3DI GCAATG 5 cut(s) 35, 1752, 1831, 1965, 2257
Bse8I GATNNNNATC 1 cut(s) 1649
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 5 cut(s) 165, 945, 1544, 1679, 2283
BseDI CCNNGG 7 cut(s) 163, 372, 547, 852, 944, 1543, 2112
BseGI GGATG 2 cut(s) 777, 1199
BseJI GATNNNNATC 1 cut(s) 1649
BseLI CCNNNNNNNGG 6 cut(s) 228, 553, 554, 642, 1482, 2113
BseMI GCAATG 5 cut(s) 35, 1752, 1831, 1965, 2257
BseNI ACTGG 3 cut(s) 1839, 2313, 2341
BsePI GCGCGC 1 cut(s) 631
BseSI GKGCMC 1 cut(s) 654
BseX3I CGGCCG 1 cut(s) 2216
BseXI GCAGC 6 cut(s) 369, 607, 1433, 1560, 1998, 2270
BseYI CCCAGC 1 cut(s) 2324
Bsh1236I CGCG 4 cut(s) 633, 1090, 1920, 2183
Bsh1285I CGRYCG 2 cut(s) 2215, 2219
BshFI GGCC 6 cut(s) 297, 377, 1473, 1542, 2106, 2218
BshNI GGYRCC 2 cut(s) 1069, 1316
BshTI ACCGGT 2 cut(s) 513, 2040
BsiEI CGRYCG 2 cut(s) 2215, 2219
BsiHKCI CYCGRG 3 cut(s) 127, 547, 991
BslFI GGGAC 3 cut(s) 653, 1226, 2102
BslI CCNNNNNNNGG 6 cut(s) 228, 553, 554, 642, 1482, 2113
BsmAI GTCTC 4 cut(s) 130, 237, 1803, 2313
BsmFI GGGAC 3 cut(s) 653, 1226, 2102
BsmI GAATGC 3 cut(s) 1136, 1171, 1246
BsnI GGCC 6 cut(s) 297, 377, 1473, 1542, 2106, 2218
Bso31I GGTCTC 2 cut(s) 1803, 2313
BsoBI CYCGRG 3 cut(s) 127, 547, 991
Bsp1286I GDGCHC 1 cut(s) 654
Bsp13I TCCGGA 1 cut(s) 211
Bsp1407I TGTACA 2 cut(s) 606, 932
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 5 cut(s) 499, 593, 885, 1374, 1464
BspANI GGCC 6 cut(s) 297, 377, 1473, 1542, 2106, 2218
BspEI TCCGGA 1 cut(s) 211
BspFNI CGCG 4 cut(s) 633, 1090, 1920, 2183
BspLI GGNNCC 5 cut(s) 518, 1071, 1318, 1474, 1601
BspMAI CTGCAG 1 cut(s) 1423
BspMI ACCTGC 1 cut(s) 1671
BspOI GCTAGC 1 cut(s) 1824
BspPI GGATC 6 cut(s) 572, 646, 653, 842, 1355, 1772
BspQI GCTCTTC 1 cut(s) 2268
BspT107I GGYRCC 2 cut(s) 1069, 1316
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 2 cut(s) 1803, 2313
BsrDI GCAATG 5 cut(s) 35, 1752, 1831, 1965, 2257
BsrFI RCCGGY 5 cut(s) 495, 513, 1244, 2040, 2214
BsrGI TGTACA 2 cut(s) 606, 932
BsrI ACTGG 3 cut(s) 1839, 2313, 2341
BssAI RCCGGY 5 cut(s) 495, 513, 1244, 2040, 2214
BssECI CCNNGG 7 cut(s) 163, 372, 547, 852, 944, 1543, 2112
BssHII GCGCGC 1 cut(s) 631
BssNAI GTATAC 1 cut(s) 1993
BssT1I CCWWGG 1 cut(s) 372
Bst1107I GTATAC 1 cut(s) 1993
Bst2UI CCWGG 5 cut(s) 165, 945, 1544, 1679, 2283
Bst4CI ACNGT 5 cut(s) 804, 902, 914, 1997, 2169
Bst6I CTCTTC 6 cut(s) 361, 1119, 1548, 1632, 2268, 2291
BstAFI CTTAAG 1 cut(s) 1135
BstAUI TGTACA 2 cut(s) 606, 932
BstBAI YACGTR 1 cut(s) 810
BstC8I GCNNGC 4 cut(s) 622, 633, 1822, 2386
BstDEI CTNAG 4 cut(s) 24, 957, 1105, 1406
BstDSI CCRYGG 1 cut(s) 372
BstF5I GGATG 2 cut(s) 777, 1199
BstFNI CGCG 4 cut(s) 633, 1090, 1920, 2183
BstH2I RGCGCY 1 cut(s) 142
BstHHI GCGC 5 cut(s) 141, 633, 635, 1090, 2185
BstMAI GTCTC 4 cut(s) 130, 237, 1803, 2313
BstMCI CGRYCG 2 cut(s) 2215, 2219
BstMWI GCNNNNNNNGC 4 cut(s) 138, 496, 630, 1470
BstNI CCWGG 5 cut(s) 165, 945, 1544, 1679, 2283
BstNSI RCATGY 3 cut(s) 939, 2084, 2370
BstSCI CCNGG 9 cut(s) 163, 503, 546, 547, 852, 943, 1542, 1677, 2281
BstSFI CTRYAG 2 cut(s) 1419, 2373
BstSLI GKGCMC 1 cut(s) 654
BstUI CGCG 4 cut(s) 633, 1090, 1920, 2183
BstV1I GCAGC 6 cut(s) 369, 607, 1433, 1560, 1998, 2270
BstX2I RGATCY 4 cut(s) 638, 1360, 1387, 1764
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 4 cut(s) 638, 1360, 1387, 1764
BstZ17I GTATAC 1 cut(s) 1993
BstZI CGGCCG 1 cut(s) 2216
BsuI GTATCC 3 cut(s) 382, 1030, 1216
BsuRI GGCC 6 cut(s) 297, 377, 1473, 1542, 2106, 2218
BtgI CCRYGG 1 cut(s) 372
BtsCI GGATG 2 cut(s) 777, 1199
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 2 cut(s) 30, 2320
BveI ACCTGC 1 cut(s) 1671
Cac8I GCNNGC 4 cut(s) 622, 633, 1822, 2386
CaiI CAGNNNCTG 1 cut(s) 1364
CfoI GCGC 5 cut(s) 141, 633, 635, 1090, 2185
Cfr10I RCCGGY 5 cut(s) 495, 513, 1244, 2040, 2214
Cfr13I GGNCC 4 cut(s) 501, 804, 887, 1472
Cfr9I CCCGGG 1 cut(s) 547
CpoI CGGWCCG 1 cut(s) 501
CseI GACGC 1 cut(s) 1740
Csp6I GTAC 6 cut(s) 607, 824, 933, 976, 2203, 2334
CspAI ACCGGT 2 cut(s) 513, 2040
CspI CGGWCCG 1 cut(s) 501
CviQI GTAC 6 cut(s) 607, 824, 933, 976, 2203, 2334
DdeI CTNAG 4 cut(s) 24, 957, 1105, 1406
DrdI GACNNNNNNGTC 1 cut(s) 122
DseDI GACNNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 3 cut(s) 375, 1540, 2216
EagI CGGCCG 1 cut(s) 2216
Eam1104I CTCTTC 6 cut(s) 361, 1119, 1548, 1632, 2268, 2291
EarI CTCTTC 6 cut(s) 361, 1119, 1548, 1632, 2268, 2291
EclXI CGGCCG 1 cut(s) 2216
Eco130I CCWWGG 1 cut(s) 372
Eco147I AGGCCT 1 cut(s) 297
Eco31I GGTCTC 2 cut(s) 1803, 2313
Eco47I GGWCC 3 cut(s) 501, 804, 887
Eco47III AGCGCT 1 cut(s) 140
Eco52I CGGCCG 1 cut(s) 2216
Eco57I CTGAAG 1 cut(s) 142
Eco72I CACGTG 1 cut(s) 810
Eco88I CYCGRG 3 cut(s) 127, 547, 991
EcoRI GAATTC 2 cut(s) 4, 1534
EcoRII CCWGG 5 cut(s) 163, 943, 1542, 1677, 2281
EcoT14I CCWWGG 1 cut(s) 372
ErhI CCWWGG 1 cut(s) 372
FaqI GGGAC 3 cut(s) 653, 1226, 2102
FauNDI CATATG 1 cut(s) 1933
FbaI TGATCA 1 cut(s) 817
FblI GTMKAC 2 cut(s) 338, 1992
Fnu4HI GCNGC 6 cut(s) 383, 596, 1422, 1574, 2012, 2259
FokI GGATG 2 cut(s) 784, 1206
Fsp4HI GCNGC 6 cut(s) 383, 596, 1422, 1574, 2012, 2259
FspBI CTAG 6 cut(s) 9, 1061, 1718, 1758, 1821, 2015
GlaI GCGC 5 cut(s) 140, 632, 634, 1089, 2184
GluI GCNGC 6 cut(s) 383, 596, 1422, 1574, 2012, 2259
GsaI CCCAGC 1 cut(s) 2328
GsuI CTGGAG 2 cut(s) 288, 2358
HaeII RGCGCY 1 cut(s) 142
HaeIII GGCC 6 cut(s) 297, 377, 1473, 1542, 2106, 2218
HgaI GACGC 1 cut(s) 1740
HhaI GCGC 5 cut(s) 141, 633, 635, 1090, 2185
Hin6I GCGC 5 cut(s) 139, 631, 633, 1088, 2183
HinP1I GCGC 5 cut(s) 139, 631, 633, 1088, 2183
HphI GGTGA 4 cut(s) 1938, 1990, 2150, 2262
Hpy166II GTNNAC 6 cut(s) 339, 807, 826, 933, 1096, 1993
Hpy188I TCNGA 5 cut(s) 1113, 1387, 1889, 1987, 2116
Hpy8I GTNNAC 6 cut(s) 339, 807, 826, 933, 1096, 1993
Hpy99I CGWCG 3 cut(s) 119, 755, 2169
HpyAV CCTTC 7 cut(s) 434, 1034, 1045, 1454, 1958, 2096, 2277
HpyCH4III ACNGT 5 cut(s) 804, 902, 914, 1997, 2169
HpyCH4IV ACGT 5 cut(s) 117, 181, 699, 809, 1324
HpyF10VI GCNNNNNNNGC 4 cut(s) 138, 496, 630, 1470
HpyF3I CTNAG 4 cut(s) 24, 957, 1105, 1406
HpySE526I ACGT 5 cut(s) 117, 181, 699, 809, 1324
HspAI GCGC 5 cut(s) 139, 631, 633, 1088, 2183
Kpn2I TCCGGA 1 cut(s) 211
Ksp22I TGATCA 1 cut(s) 817
LguI GCTCTTC 1 cut(s) 2268
LmnI GCTCC 3 cut(s) 214, 969, 1889
Lsp1109I GCAGC 6 cut(s) 369, 607, 1433, 1560, 1998, 2270
LweI GCATC 2 cut(s) 1635, 2245
MaeI CTAG 6 cut(s) 9, 1061, 1718, 1758, 1821, 2015
MaeII ACGT 5 cut(s) 117, 181, 699, 809, 1324
MaeIII GTNAC 8 cut(s) 346, 866, 902, 1056, 1198, 1944, 2303, 2362
MfeI CAATTG 1 cut(s) 1275
MflI RGATCY 4 cut(s) 638, 1360, 1387, 1764
MhlI GDGCHC 1 cut(s) 654
MlsI TGGCCA 2 cut(s) 377, 1542
MluNI TGGCCA 2 cut(s) 377, 1542
MlyI GAGTC 4 cut(s) 673, 749, 1070, 1676
MmeI TCCRAC 3 cut(s) 169, 1906, 2056
Mox20I TGGCCA 2 cut(s) 377, 1542
MroI TCCGGA 1 cut(s) 211
MroXI GAANNNNTTC 2 cut(s) 562, 1144
MscI TGGCCA 2 cut(s) 377, 1542
MseI TTAA 4 cut(s) 1136, 1379, 1793, 2346
Msp20I TGGCCA 2 cut(s) 377, 1542
MspA1I CMGCKG 1 cut(s) 598
MspCI CTTAAG 1 cut(s) 1135
MspR9I CCNGG 9 cut(s) 165, 505, 548, 549, 854, 945, 1544, 1679, 2283
MunI CAATTG 1 cut(s) 1275
Mva1269I GAATGC 3 cut(s) 1136, 1171, 1246
MvaI CCWGG 5 cut(s) 165, 945, 1544, 1679, 2283
MvnI CGCG 4 cut(s) 633, 1090, 1920, 2183
MwoI GCNNNNNNNGC 4 cut(s) 138, 496, 630, 1470
NciI CCSGG 4 cut(s) 505, 548, 549, 854
NcoI CCATGG 1 cut(s) 372
NdeI CATATG 1 cut(s) 1933
NheI GCTAGC 1 cut(s) 1820
NlaIV GGNNCC 5 cut(s) 518, 1071, 1318, 1474, 1601
NmeAIII GCCGAG 1 cut(s) 2132
NmuCI GTSAC 5 cut(s) 866, 902, 1056, 1198, 1944
NspI RCATGY 3 cut(s) 939, 2084, 2370
PaeR7I CTCGAG 1 cut(s) 127
PalAI GGCGCGCC 1 cut(s) 631
PauI GCGCGC 1 cut(s) 631
PceI AGGCCT 1 cut(s) 297
PciI ACATGT 1 cut(s) 2080
PciSI GCTCTTC 1 cut(s) 2268
PctI GAATGC 3 cut(s) 1136, 1171, 1246
PdmI GAANNNNTTC 2 cut(s) 562, 1144
PfeI GAWTC 8 cut(s) 80, 785, 792, 1271, 1784, 1797, 2063, 2141
PflFI GACNNNGTC 1 cut(s) 2224
PflMI CCANNNNNTGG 1 cut(s) 228
PinAI ACCGGT 2 cut(s) 513, 2040
PkrI GCNGC 6 cut(s) 384, 597, 1423, 1575, 2013, 2260
PleI GAGTC 4 cut(s) 673, 749, 1070, 1676
PmaCI CACGTG 1 cut(s) 810
PmlI CACGTG 1 cut(s) 810
PpsI GAGTC 4 cut(s) 673, 749, 1070, 1676
Ppu21I YACGTR 1 cut(s) 810
PscI ACATGT 1 cut(s) 2080
Psp1406I AACGTT 1 cut(s) 181
Psp6I CCWGG 5 cut(s) 163, 943, 1542, 1677, 2281
PspCI CACGTG 1 cut(s) 810
PspFI CCCAGC 1 cut(s) 2324
PspGI CCWGG 5 cut(s) 163, 943, 1542, 1677, 2281
PspN4I GGNNCC 5 cut(s) 518, 1071, 1318, 1474, 1601
PspPI GGNCC 4 cut(s) 501, 804, 887, 1472
PstI CTGCAG 1 cut(s) 1423
PstNI CAGNNNCTG 1 cut(s) 1364
PsuI RGATCY 4 cut(s) 638, 1360, 1387, 1764
PsyI GACNNNGTC 1 cut(s) 2224
PteI GCGCGC 1 cut(s) 631
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 6 cut(s) 608, 825, 934, 977, 2204, 2335
RsaNI GTAC 6 cut(s) 607, 824, 933, 976, 2203, 2334
Rsr2I CGGWCCG 1 cut(s) 501
RsrII CGGWCCG 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 2268
SaqAI TTAA 4 cut(s) 1136, 1379, 1793, 2346
SatI GCNGC 6 cut(s) 383, 596, 1422, 1574, 2012, 2259
Sau96I GGNCC 4 cut(s) 501, 804, 887, 1472
ScaI AGTACT 1 cut(s) 2335
SchI GAGTC 4 cut(s) 673, 749, 1070, 1676
ScrFI CCNGG 9 cut(s) 165, 505, 548, 549, 854, 945, 1544, 1679, 2283
SduI GDGCHC 1 cut(s) 654
SfaNI GCATC 2 cut(s) 1635, 2245
SfcI CTRYAG 2 cut(s) 1419, 2373
Sfr274I CTCGAG 1 cut(s) 127
SgsI GGCGCGCC 1 cut(s) 631
SinI GGWCC 3 cut(s) 501, 804, 887
SlaI CTCGAG 1 cut(s) 127
SmaI CCCGGG 1 cut(s) 549
SmlI CTYRAG 5 cut(s) 127, 537, 766, 979, 1135
SmoI CTYRAG 5 cut(s) 127, 537, 766, 979, 1135
SpeI ACTAGT 1 cut(s) 1060
SseBI AGGCCT 1 cut(s) 297
SsiI CCGC 5 cut(s) 499, 593, 885, 1374, 1464
SspI AATATT 3 cut(s) 17, 368, 1884
SspMI CTAG 6 cut(s) 9, 1061, 1718, 1758, 1821, 2015
StuI AGGCCT 1 cut(s) 297
StyD4I CCNGG 9 cut(s) 163, 503, 546, 547, 852, 943, 1542, 1677, 2281
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 5 cut(s) 804, 902, 914, 1997, 2169
TaiI ACGT 5 cut(s) 120, 184, 702, 812, 1327
TaqI TCGA 7 cut(s) 128, 927, 1163, 1264, 1787, 2124, 2164
TatI WGTACW 3 cut(s) 606, 932, 2333
TfiI GAWTC 8 cut(s) 80, 785, 792, 1271, 1784, 1797, 2063, 2141
Tru1I TTAA 4 cut(s) 1136, 1379, 1793, 2346
Tru9I TTAA 4 cut(s) 1136, 1379, 1793, 2346
TscAI CASTG 2 cut(s) 37, 2320
TseFI GTSAC 5 cut(s) 866, 902, 1056, 1198, 1944
TseI GCWGC 6 cut(s) 382, 595, 1421, 1573, 2011, 2258
Tsp45I GTSAC 5 cut(s) 866, 902, 1056, 1198, 1944
TspGWI ACGGA 3 cut(s) 891, 1012, 1050
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 2 cut(s) 37, 2320
Tth111I GACNNNGTC 1 cut(s) 2224
Van91I CCANNNNNTGG 1 cut(s) 228
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 3 cut(s) 501, 804, 887
XapI RAATTY 8 cut(s) 4, 169, 397, 685, 1342, 1432, 1534, 2068
XbaI TCTAGA 1 cut(s) 1717
XceI RCATGY 3 cut(s) 939, 2084, 2370
XhoI CTCGAG 1 cut(s) 127
XmaI CCCGGG 1 cut(s) 547
XmiI GTMKAC 2 cut(s) 338, 1992
XmnI GAANNNNTTC 2 cut(s) 562, 1144
XspI CTAG 6 cut(s) 9, 1061, 1718, 1758, 1821, 2015
ZrmI AGTACT 1 cut(s) 2335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.