Rroxscaffold_2G00123900

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
57842186 .. 57845625
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00123900.1

Sequence Viewer

Length: 2445 bp
ATGAATTCTATTCAATGGTCTATGATCACTGCATTGCTCATCTTCCTGCTTCTTTATCTCCCCTCTTGCATTTCAATTGATTCCATTACTCCAAACCAAACCATCAAAGACGGCGACGTTTTAGTCTCGAGCAGGAAGCTCTTTGCACTGGGGTTCTTCAGCCCTGGAAATTCTGGCAAACGTTACGTTGGAGTTTGGTATAACAAAGTTCCAGAGCAGACCATTGTTTGGGTTGCAAATAGAGACAACCCTGTTAATGATTCCTCTGGACTTTTGGTGATCGAGGGAGACGGAGGCCTTGTCATATATGGAAAGGACAGAAAACTCCCTCTTTGGTCAGCTAATGTTACTCTCCCTACTCCAAAAAACTCCATGGCCAAACTGTTGGATACAGGTAACTTTGTTTTGTTTGAGAATGGCCGGAGCTTGTGGGAAGGGTTTGATTATCCCTCAAATACAATGCTTCCTTTTATGAAAATTGGGCGGAACCGGCGATCCGGGCTTAACCGGTTCCTAACTTCTTGGAAGTCCCAAGATGACCCGGGAACCGGGAGTTTTTCATATAGCATTGATCCAGATGGGTTTCCGCAGCTGTTTTTGTACAAAGGTCAAGCTCCCCGGTGGCGAGCCGGATCTTGGATCGGGCACAGATGGAGTGGTGTCCTCGGATTGACTCCTAATTTCAACTTCAACGCTAGTTTTGTGAACAATCAAGATGAGCTATCAGTCATGTATGGCATTAAGGACGACTCAATCTTCTCAAGGATGGTGCTTGATGAATCAGGAATCCTCGAACGGTCCACGTGGCAAGATCAGGAACACCAATGGATCAAGTCTTGGTCTGCCCCGGTAGAGCTATGTGATAACTATGGAAAGTGTGGTCCAAATAGTAACTGTGACCCTTACATGTACTATGCTGGTGAGTTCGAGTGTACATGCCTACCTGGGTTTGAACCTAAGTCGATCCATGCATGGTACTTGAGAGATGGATCGGGTGGGTGTGTGAGGAAAAGAGGAGTATCCGTGTGTGAAAACGGAGAAGGGTTCGTGAAGGTGTCACCAGTAAAGGCACCAGACTCATCTACTGCGCGCATAAACTTGACATTGGGTCTGAAAGAATGTGAAGAGGAATGCTTAAGGAATTGTTCTTGCATGGCATACTCAAGTGCAGGTGACCCGCAAGGAGGGAATGGATGCGTGACATGGTACGGGGACTTGATGGATATAAGGACTTACACGAATGTCAATCAAGATTTATATGTTCGAGTTGATTCAATTGAATTAGCTAAATACGCAAAGAAGTCGAATGGTTCTCTTAGCAAGAAGGGAAAGATGGCAATTATGATAACATCTATTTTAGTGTTCTTTGTGGTGATCTCTATCGCATATTGTTCCAAAAAGATGAAGAAAAAAGGTAAGGAAAGACAAGATCTATTTTCATTTGGTGCGATCACACCTTCAATCTACTTGGAAGATTCTCCTAGTAGAACAGATCCCGGTGATAGCAGATTAAAGTCGGATCCACCTTTCTTTGATCTAAGCACCATATCTGCAGCCACAAACAATTTCTCTGATTCGAACAAGCTTGGAGAAGGCGGATTTGGCCCCGTTTATAAGGGAGTGCTTGCTAGTGGAACAGAATTAGCCGTGAAAAGACTAAGCAAAAATTCTGGCCAAGGAAATGAACAGTTCAAGAATGAAGTTTCGCTGATTGCAAAACTTCAACACAGGAACCTTGTGAGAATTTTAGGCTATTGCGTTCAAGATGAAGAGAAGATGCTAATCTATGAATACCTGCCCAACAAAAGCCTGGACTCTTTCATTTTCAATGAAATGAAAAGGACATCTCTGGATTGGACAAGACGCTTGGAGATTATCCTTGGCATTGCTAGAGGGATCCTGTATCTTCATCAAGATTCGAGATTAAGGATCATCCATAGAGACCTAAAGGCCAGCAATATCCTACTGGATTATGATATGAACCCCAAAATTGCAGATTTTGGTATGGCTAGAATATTTGGAGCAAACCAAATTGAAGCAAATACAAATTGCGTGGTTGGAACATATGGTTACATGTCACCGGAGTATGCAATGGAAGGACTATTTTCAGTGAAGTCCGATGTATACAGTTTCGGTGTTTGGGACTTGTGGAAAGAAGGCCGAGCTTTGGAAATCATAGACACATCTTTGGGTCAATCCTACCCCATAAGTGAAGTTCTACGGTGCATTCAAATTGCGCTCCTGTGTGTGCAAGAGTGCGCAAATGACCGGCCAACCATGTCAAAAGTTATGTCCGTGTTAGGCAACAATGCAGCTCTTCCTTCACCAAGAAAACCTGGATTTCTGTTGAAGAGAAGTAACTATACCAGAGAAGACCCCAGTACTAGTGCTGGAGATGCTAATTCCATAAATTATGTTACATGCACTATAGTTGAAGCTCGATAA

Protein Analysis

814

Amino Acids

90.86

Weight (kDa)

7.92

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 176 1.6e-30 D-mannose binding lectin
S_locus_glycop PF00954 208 - 321 7.2e-26 S-locus glycoprotein domain
PAN_2 PF08276 343 - 409 2.2e-19 PAN-like domain
Pkinase PF00069 524 - 713 1.6e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 526 - 721 4.1e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1614
AarI CACCTGC 1 cut(s) 1160
AasI GACNNNNNNGTC 1 cut(s) 122
Acc16I TGCGCA 1 cut(s) 2260
Acc36I ACCTGC 2 cut(s) 1160, 1803
AccB1I GGYRCC 1 cut(s) 1069
AccB7I CCANNNNNTGG 1 cut(s) 228
AccI GTMKAC 1 cut(s) 2124
AccII CGCG 1 cut(s) 1090
AciI CCGC 4 cut(s) 484, 587, 1178, 1596
AclI AACGTT 1 cut(s) 181
AcoI YGGCCR 4 cut(s) 375, 418, 1672, 2270
AcsI RAATTY 4 cut(s) 4, 169, 1666, 1743
AcuI CTGAAG 1 cut(s) 142
AcvI CACGTG 1 cut(s) 804
AfaI GTAC 6 cut(s) 602, 911, 934, 977, 1208, 2383
AfiI CCNNNNNNNGG 5 cut(s) 228, 548, 636, 1184, 2167
AflII CTTAAG 1 cut(s) 1135
AflIII ACRYGT 2 cut(s) 906, 2073
AgeI ACCGGT 1 cut(s) 507
AhdI GACNNNNNGTC 1 cut(s) 1107
AhlI ACTAGT 1 cut(s) 2384
AjnI CCWGG 4 cut(s) 163, 943, 1809, 2335
AjuI GAANNNNNNNTTGG 2 cut(s) 1584, 1616
AloI GAACNNNNNNTCC 2 cut(s) 479, 511
Alw26I GTCTC 4 cut(s) 130, 237, 282, 1935
Ama87I CYCGRG 2 cut(s) 127, 541
AoxI GGCC 8 cut(s) 295, 375, 418, 1603, 1672, 1950, 2158, 2270
ApeKI GCWGC 3 cut(s) 589, 1553, 2312
ApoI RAATTY 4 cut(s) 4, 169, 1666, 1743
ArsI GACNNNNNNTTYG 2 cut(s) 2276, 2308
AsiGI ACCGGT 1 cut(s) 507
AspLEI GCGC 4 cut(s) 1090, 1092, 2239, 2261
AspS9I GGNCC 3 cut(s) 798, 881, 1604
AsuC2I CCSGG 7 cut(s) 499, 542, 543, 550, 619, 848, 1497
AsuHPI GGTGA 8 cut(s) 289, 932, 1050, 1184, 1384, 1511, 2070, 2316
AsuII TTCGAA 1 cut(s) 1577
AvaI CYCGRG 2 cut(s) 127, 541
AvaII GGWCC 2 cut(s) 798, 881
BaeGI GKGCMC 1 cut(s) 648
BalI TGGCCA 2 cut(s) 377, 1674
BamHI GGATCC 2 cut(s) 1519, 1896
BanI GGYRCC 1 cut(s) 1069
BarI GAAGNNNNNNTAC 2 cut(s) 2347, 2379
BbrPI CACGTG 1 cut(s) 804
BbsI GAAGAC 1 cut(s) 2379
BbvI GCAGC 3 cut(s) 601, 1565, 2324
BccI CCATC 7 cut(s) 110, 572, 645, 760, 980, 1213, 1327
BceAI ACGGC 2 cut(s) 127, 1631
BcgI CGANNNNNNTGC 2 cut(s) 1284, 1318
BciT130I CCWGG 4 cut(s) 165, 945, 1811, 2337
BciVI GTATCC 2 cut(s) 382, 1030
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 7 cut(s) 499, 542, 543, 550, 619, 848, 1497
BcoDI GTCTC 4 cut(s) 130, 237, 282, 1935
BcuI ACTAGT 1 cut(s) 2384
BfaI CTAG 6 cut(s) 696, 1482, 1629, 1890, 2010, 2385
BfmI CTRYAG 2 cut(s) 1551, 2427
BfrI CTTAAG 1 cut(s) 1135
BfuAI ACCTGC 2 cut(s) 1160, 1803
BfuI GTATCC 2 cut(s) 382, 1030
BglII AGATCT 1 cut(s) 1429
BisI GCNGC 3 cut(s) 590, 1554, 2313
BlsI GCNGC 3 cut(s) 591, 1555, 2314
BmcAI AGTACT 1 cut(s) 2383
Bme18I GGWCC 2 cut(s) 798, 881
BmeRI GACNNNNNGTC 1 cut(s) 1107
BmeT110I CYCGRG 2 cut(s) 127, 541
BmgT120I GGNCC 3 cut(s) 798, 881, 1604
BmiI GGNNCC 8 cut(s) 488, 512, 547, 1071, 1521, 1606, 1733, 1898
BmrI ACTGGG 2 cut(s) 158, 2373
BmsI GCATC 3 cut(s) 1184, 1767, 2386
BmuI ACTGGG 2 cut(s) 158, 2373
BpiI GAAGAC 1 cut(s) 2379
BpmI CTGGAG 1 cut(s) 2412
Bpu14I TTCGAA 1 cut(s) 1577
BpuEI CTTGAG 3 cut(s) 745, 1000, 1147
BpuMI CCSGG 7 cut(s) 499, 542, 543, 550, 619, 848, 1497
BsaAI YACGTR 1 cut(s) 804
BsaBI GATNNNNATC 2 cut(s) 1379, 1781
BsaI GGTCTC 1 cut(s) 1935
BsaJI CCNNGG 9 cut(s) 163, 372, 541, 617, 664, 846, 944, 1675, 1879
BsaWI WCCGGW 2 cut(s) 507, 2080
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 1008, 1038
Bsc4I CCNNNNNNNGG 5 cut(s) 228, 548, 636, 1184, 2167
Bse118I RCCGGY 3 cut(s) 489, 507, 2268
Bse1I ACTGG 4 cut(s) 153, 1061, 1971, 2379
Bse3DI GCAATG 3 cut(s) 32, 1884, 2097
Bse8I GATNNNNATC 2 cut(s) 1379, 1781
BseBI CCWGG 4 cut(s) 165, 945, 1811, 2337
BseDI CCNNGG 9 cut(s) 163, 372, 541, 617, 664, 846, 944, 1675, 1879
BseGI GGATG 3 cut(s) 771, 1199, 1932
BseJI GATNNNNATC 2 cut(s) 1379, 1781
BseLI CCNNNNNNNGG 5 cut(s) 228, 548, 636, 1184, 2167
BseMI GCAATG 3 cut(s) 32, 1884, 2097
BseNI ACTGG 4 cut(s) 153, 1061, 1971, 2379
BsePI GCGCGC 1 cut(s) 1088
BseRI GAGGAG 1 cut(s) 1029
BseSI GKGCMC 1 cut(s) 648
BseXI GCAGC 3 cut(s) 601, 1565, 2324
BsgI GTGCAG 1 cut(s) 1188
Bsh1236I CGCG 1 cut(s) 1090
BshFI GGCC 8 cut(s) 297, 377, 420, 1605, 1674, 1952, 2160, 2272
BshNI GGYRCC 1 cut(s) 1069
BshTI ACCGGT 1 cut(s) 507
BsiHKCI CYCGRG 2 cut(s) 127, 541
BslFI GGGAC 3 cut(s) 514, 1226, 2156
BslI CCNNNNNNNGG 5 cut(s) 228, 548, 636, 1184, 2167
BsmAI GTCTC 4 cut(s) 130, 237, 282, 1935
BsmBI CGTCTC 1 cut(s) 282
BsmFI GGGAC 3 cut(s) 514, 1226, 2156
BsmI GAATGC 2 cut(s) 1136, 2226
BsnI GGCC 8 cut(s) 297, 377, 420, 1605, 1674, 1952, 2160, 2272
Bso31I GGTCTC 1 cut(s) 1935
BsoBI CYCGRG 2 cut(s) 127, 541
Bsp119I TTCGAA 1 cut(s) 1577
Bsp1286I GDGCHC 1 cut(s) 648
Bsp1407I TGTACA 2 cut(s) 600, 932
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 4 cut(s) 484, 587, 1178, 1596
BspANI GGCC 8 cut(s) 297, 377, 420, 1605, 1674, 1952, 2160, 2272
BspFNI CGCG 1 cut(s) 1090
BspLI GGNNCC 8 cut(s) 488, 512, 547, 1071, 1521, 1606, 1733, 1898
BspMAI CTGCAG 1 cut(s) 1555
BspMI ACCTGC 2 cut(s) 1160, 1803
BspQI GCTCTTC 1 cut(s) 2322
BspT104I TTCGAA 1 cut(s) 1577
BspT107I GGYRCC 1 cut(s) 1069
BspTI CTTAAG 1 cut(s) 1135
BspTNI GGTCTC 1 cut(s) 1935
BsrDI GCAATG 3 cut(s) 32, 1884, 2097
BsrFI RCCGGY 3 cut(s) 489, 507, 2268
BsrGI TGTACA 2 cut(s) 600, 932
BsrI ACTGG 4 cut(s) 153, 1061, 1971, 2379
BssAI RCCGGY 3 cut(s) 489, 507, 2268
BssECI CCNNGG 9 cut(s) 163, 372, 541, 617, 664, 846, 944, 1675, 1879
BssHII GCGCGC 1 cut(s) 1088
BssNAI GTATAC 1 cut(s) 2125
BssT1I CCWWGG 3 cut(s) 372, 1675, 1879
Bst1107I GTATAC 1 cut(s) 2125
Bst2UI CCWGG 4 cut(s) 165, 945, 1811, 2337
Bst4CI ACNGT 6 cut(s) 384, 798, 896, 1689, 2129, 2223
Bst6I CTCTTC 4 cut(s) 1119, 1764, 2322, 2345
BstAFI CTTAAG 1 cut(s) 1135
BstAUI TGTACA 2 cut(s) 600, 932
BstBAI YACGTR 1 cut(s) 804
BstBI TTCGAA 1 cut(s) 1577
BstC8I GCNNGC 4 cut(s) 627, 1090, 1626, 1954
BstDEI CTNAG 4 cut(s) 957, 1316, 1538, 1658
BstDSI CCRYGG 1 cut(s) 372
BstEII GGTNACC 1 cut(s) 1172
BstF5I GGATG 3 cut(s) 771, 1199, 1932
BstFNI CGCG 1 cut(s) 1090
BstHHI GCGC 4 cut(s) 1090, 1092, 2239, 2261
BstMAI GTCTC 4 cut(s) 130, 237, 282, 1935
BstMWI GCNNNNNNNGC 5 cut(s) 490, 499, 1292, 1602, 2396
BstNI CCWGG 4 cut(s) 165, 945, 1811, 2337
BstNSI RCATGY 4 cut(s) 910, 939, 2077, 2424
BstPI GGTNACC 1 cut(s) 1172
BstSFI CTRYAG 2 cut(s) 1551, 2427
BstSLI GKGCMC 1 cut(s) 648
BstUI CGCG 1 cut(s) 1090
BstV1I GCAGC 3 cut(s) 601, 1565, 2324
BstV2I GAAGAC 1 cut(s) 2379
BstX2I RGATCY 5 cut(s) 632, 1429, 1492, 1519, 1896
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 5 cut(s) 632, 1429, 1492, 1519, 1896
BstZ17I GTATAC 1 cut(s) 2125
BsuI GTATCC 2 cut(s) 382, 1030
BsuRI GGCC 8 cut(s) 297, 377, 420, 1605, 1674, 1952, 2160, 2272
BtgI CCRYGG 1 cut(s) 372
BtsCI GGATG 3 cut(s) 771, 1199, 1932
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 3 cut(s) 27, 146, 2115
BveI ACCTGC 2 cut(s) 1160, 1803
Cac8I GCNNGC 4 cut(s) 627, 1090, 1626, 1954
CfoI GCGC 4 cut(s) 1090, 1092, 2239, 2261
Cfr10I RCCGGY 3 cut(s) 489, 507, 2268
Cfr13I GGNCC 3 cut(s) 798, 881, 1604
Cfr9I CCCGGG 1 cut(s) 541
CseI GACGC 1 cut(s) 1872
Csp6I GTAC 6 cut(s) 601, 910, 933, 976, 1207, 2382
CspAI ACCGGT 1 cut(s) 507
CspCI CAANNNNNGTGG 2 cut(s) 2034, 2069
CviQI GTAC 6 cut(s) 601, 910, 933, 976, 1207, 2382
DdeI CTNAG 4 cut(s) 957, 1316, 1538, 1658
DrdI GACNNNNNNGTC 1 cut(s) 122
DriI GACNNNNNGTC 1 cut(s) 1107
DseDI GACNNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 4 cut(s) 375, 418, 1672, 2270
Eam1104I CTCTTC 4 cut(s) 1119, 1764, 2322, 2345
Eam1105I GACNNNNNGTC 1 cut(s) 1107
EarI CTCTTC 4 cut(s) 1119, 1764, 2322, 2345
EciI GGCGGA 2 cut(s) 499, 1611
Eco130I CCWWGG 3 cut(s) 372, 1675, 1879
Eco147I AGGCCT 1 cut(s) 297
Eco31I GGTCTC 1 cut(s) 1935
Eco47I GGWCC 2 cut(s) 798, 881
Eco57I CTGAAG 1 cut(s) 142
Eco72I CACGTG 1 cut(s) 804
Eco88I CYCGRG 2 cut(s) 127, 541
Eco91I GGTNACC 1 cut(s) 1172
EcoO65I GGTNACC 1 cut(s) 1172
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 4 cut(s) 163, 943, 1809, 2335
EcoT14I CCWWGG 3 cut(s) 372, 1675, 1879
EcoT22I ATGCAT 1 cut(s) 973
ErhI CCWWGG 3 cut(s) 372, 1675, 1879
Esp3I CGTCTC 1 cut(s) 282
FaqI GGGAC 3 cut(s) 514, 1226, 2156
FauI CCCGC 1 cut(s) 1185
FauNDI CATATG 1 cut(s) 2065
FbaI TGATCA 1 cut(s) 24
FblI GTMKAC 1 cut(s) 2124
Fnu4HI GCNGC 3 cut(s) 590, 1554, 2313
FokI GGATG 3 cut(s) 778, 1206, 1919
Fsp4HI GCNGC 3 cut(s) 590, 1554, 2313
FspBI CTAG 6 cut(s) 696, 1482, 1629, 1890, 2010, 2385
FspI TGCGCA 1 cut(s) 2260
GlaI GCGC 4 cut(s) 1089, 1091, 2238, 2260
GluI GCNGC 3 cut(s) 590, 1554, 2313
GsuI CTGGAG 1 cut(s) 2412
HaeIII GGCC 8 cut(s) 297, 377, 420, 1605, 1674, 1952, 2160, 2272
HgaI GACGC 1 cut(s) 1872
HhaI GCGC 4 cut(s) 1090, 1092, 2239, 2261
Hin6I GCGC 4 cut(s) 1088, 1090, 2237, 2259
HinP1I GCGC 4 cut(s) 1088, 1090, 2237, 2259
HindIII AAGCTT 1 cut(s) 1583
HphI GGTGA 8 cut(s) 289, 932, 1050, 1184, 1384, 1511, 2070, 2316
Hpy166II GTNNAC 4 cut(s) 706, 801, 933, 2125
Hpy188I TCNGA 5 cut(s) 668, 1113, 1519, 1573, 2119
Hpy8I GTNNAC 4 cut(s) 706, 801, 933, 2125
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 9 cut(s) 428, 1034, 1045, 1318, 1467, 1586, 2090, 2150, 2331
HpyCH4III ACNGT 6 cut(s) 384, 798, 896, 1689, 2129, 2223
HpyCH4IV ACGT 4 cut(s) 117, 181, 186, 803
HpyF10VI GCNNNNNNNGC 5 cut(s) 490, 499, 1292, 1602, 2396
HpyF3I CTNAG 4 cut(s) 957, 1316, 1538, 1658
HpySE526I ACGT 4 cut(s) 117, 181, 186, 803
HspAI GCGC 4 cut(s) 1088, 1090, 2237, 2259
Ksp22I TGATCA 1 cut(s) 24
LguI GCTCTTC 1 cut(s) 2322
LmnI GCTCC 4 cut(s) 423, 619, 2021, 2244
Lsp1109I GCAGC 3 cut(s) 601, 1565, 2324
LweI GCATC 3 cut(s) 1184, 1767, 2386
MaeI CTAG 6 cut(s) 696, 1482, 1629, 1890, 2010, 2385
MaeII ACGT 4 cut(s) 117, 181, 186, 803
MfeI CAATTG 2 cut(s) 75, 1275
MflI RGATCY 5 cut(s) 632, 1429, 1492, 1519, 1896
MhlI GDGCHC 1 cut(s) 648
MlsI TGGCCA 2 cut(s) 377, 1674
MluNI TGGCCA 2 cut(s) 377, 1674
MlyI GAGTC 4 cut(s) 667, 743, 1070, 1808
MmeI TCCRAC 4 cut(s) 169, 366, 1497, 2038
Mox20I TGGCCA 2 cut(s) 377, 1674
Mph1103I ATGCAT 1 cut(s) 973
MscI TGGCCA 2 cut(s) 377, 1674
MseI TTAA 6 cut(s) 255, 504, 741, 1136, 1511, 1925
Msp20I TGGCCA 2 cut(s) 377, 1674
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 1135
MunI CAATTG 2 cut(s) 75, 1275
Mva1269I GAATGC 2 cut(s) 1136, 2226
MvaI CCWGG 4 cut(s) 165, 945, 1811, 2337
MvnI CGCG 1 cut(s) 1090
MwoI GCNNNNNNNGC 5 cut(s) 490, 499, 1292, 1602, 2396
NciI CCSGG 7 cut(s) 499, 542, 543, 550, 619, 848, 1497
NcoI CCATGG 1 cut(s) 372
NdeI CATATG 1 cut(s) 2065
NlaIV GGNNCC 8 cut(s) 488, 512, 547, 1071, 1521, 1606, 1733, 1898
NmeAIII GCCGAG 1 cut(s) 2186
NmuCI GTSAC 5 cut(s) 896, 1056, 1172, 1198, 2076
NsbI TGCGCA 1 cut(s) 2260
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 4 cut(s) 910, 939, 2077, 2424
NspV TTCGAA 1 cut(s) 1577
PaeR7I CTCGAG 1 cut(s) 127
PaqCI CACCTGC 1 cut(s) 1160
PauI GCGCGC 1 cut(s) 1088
PceI AGGCCT 1 cut(s) 297
PciI ACATGT 2 cut(s) 906, 2073
PciSI GCTCTTC 1 cut(s) 2322
PctI GAATGC 2 cut(s) 1136, 2226
PfeI GAWTC 8 cut(s) 80, 260, 779, 786, 1271, 1475, 1574, 1916
PflMI CCANNNNNTGG 1 cut(s) 228
PinAI ACCGGT 1 cut(s) 507
PkrI GCNGC 3 cut(s) 591, 1555, 2314
PleI GAGTC 4 cut(s) 667, 743, 1070, 1808
PmaCI CACGTG 1 cut(s) 804
PmlI CACGTG 1 cut(s) 804
PpsI GAGTC 4 cut(s) 667, 743, 1070, 1808
Ppu21I YACGTR 1 cut(s) 804
PscI ACATGT 2 cut(s) 906, 2073
PsiI TTATAA 1 cut(s) 1614
Psp1406I AACGTT 1 cut(s) 181
Psp6I CCWGG 4 cut(s) 163, 943, 1809, 2335
PspCI CACGTG 1 cut(s) 804
PspEI GGTNACC 1 cut(s) 1172
PspGI CCWGG 4 cut(s) 163, 943, 1809, 2335
PspN4I GGNNCC 8 cut(s) 488, 512, 547, 1071, 1521, 1606, 1733, 1898
PspPI GGNCC 3 cut(s) 798, 881, 1604
PstI CTGCAG 1 cut(s) 1555
PsuI RGATCY 5 cut(s) 632, 1429, 1492, 1519, 1896
PteI GCGCGC 1 cut(s) 1088
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 6 cut(s) 602, 911, 934, 977, 1208, 2383
RsaNI GTAC 6 cut(s) 601, 910, 933, 976, 1207, 2382
SapI GCTCTTC 1 cut(s) 2322
SaqAI TTAA 6 cut(s) 255, 504, 741, 1136, 1511, 1925
SatI GCNGC 3 cut(s) 590, 1554, 2313
Sau96I GGNCC 3 cut(s) 798, 881, 1604
ScaI AGTACT 1 cut(s) 2383
SchI GAGTC 4 cut(s) 667, 743, 1070, 1808
SduI GDGCHC 1 cut(s) 648
SfaNI GCATC 3 cut(s) 1184, 1767, 2386
SfcI CTRYAG 2 cut(s) 1551, 2427
Sfr274I CTCGAG 1 cut(s) 127
SfuI TTCGAA 1 cut(s) 1577
SinI GGWCC 2 cut(s) 798, 881
SlaI CTCGAG 1 cut(s) 127
SmaI CCCGGG 1 cut(s) 543
SmlI CTYRAG 5 cut(s) 127, 760, 979, 1135, 1162
SmoI CTYRAG 5 cut(s) 127, 760, 979, 1135, 1162
SpeI ACTAGT 1 cut(s) 2384
SseBI AGGCCT 1 cut(s) 297
SsiI CCGC 4 cut(s) 484, 587, 1178, 1596
SspI AATATT 1 cut(s) 2016
SspMI CTAG 6 cut(s) 696, 1482, 1629, 1890, 2010, 2385
StuI AGGCCT 1 cut(s) 297
StyI CCWWGG 3 cut(s) 372, 1675, 1879
TaaI ACNGT 6 cut(s) 384, 798, 896, 1689, 2129, 2223
TaiI ACGT 4 cut(s) 120, 184, 189, 806
TatI WGTACW 4 cut(s) 600, 909, 932, 2381
TfiI GAWTC 8 cut(s) 80, 260, 779, 786, 1271, 1475, 1574, 1916
Tru1I TTAA 6 cut(s) 255, 504, 741, 1136, 1511, 1925
Tru9I TTAA 6 cut(s) 255, 504, 741, 1136, 1511, 1925
TscAI CASTG 3 cut(s) 34, 153, 2115
TseFI GTSAC 5 cut(s) 896, 1056, 1172, 1198, 2076
TseI GCWGC 3 cut(s) 589, 1553, 2312
Tsp45I GTSAC 5 cut(s) 896, 1056, 1172, 1198, 2076
TspGWI ACGGA 4 cut(s) 306, 1012, 1050, 2284
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 3 cut(s) 34, 153, 2115
Van91I CCANNNNNTGG 1 cut(s) 228
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 2 cut(s) 798, 881
XapI RAATTY 4 cut(s) 4, 169, 1666, 1743
XceI RCATGY 4 cut(s) 910, 939, 2077, 2424
XcmI CCANNNNNNNNNTGG 1 cut(s) 1807
XhoI CTCGAG 1 cut(s) 127
XmaI CCCGGG 1 cut(s) 541
XmiI GTMKAC 1 cut(s) 2124
XspI CTAG 6 cut(s) 696, 1482, 1629, 1890, 2010, 2385
ZrmI AGTACT 1 cut(s) 2383
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.