Rh5CG047600

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
3348258 .. 3350245
1988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG047600.1

Sequence Viewer

Length: 1689 bp
ATGAAATTTCCAAAAGGTCTGTTGAATGCATTATTGCTTCAGCTCCTTCTTCTCCAGATCTCCACTTCTTTAGACACCATCAGTTTTGATCAATCCATTAAAGACGGCGAGTTGCTGGTCTCGAAAAATGAAACCTTTGTGCTTGGATTCTTTAGTCCCGGCACTTCTAGCAACCGGTACGTTGGTATATGGTACAAGTTTTCAGATGATATGGTTGTTTGGGTGGCAAACAGAGACAACCCTGTCAATGACACCACAGGAATCCTCACACTTAGTTCTGATGGAAATCTAGTACTACTTCGAAACAACAGCCTAGGCCTACCTCTCTGGTCAACAAGTGTTTCTGTCTCATCATCAAGTAAAAACACTATAGCAGCACAGCTACTGGATTCAGGAAACTTTGTTTTGGTCCAACAAGAAAGCCAGAACGTTTTATGGCAAAGCTCTGATCATCCTACACATATTCTTCTTGCAAGTATGAAAATTGGGTTGGACAGGAAAAGGGGCATCGATCGGTATATGACTTCTTGGAACTCAAACAATGACCCGGGGACTGGGAATTGTTCGTTGAGGATGGAACCAAATGGGTCTCCACAGTTGATCTTGTACAAGAATGAGGCAAAGTTGTGGCGGTCGGGTCAATGGAATGGGATTCAGTGGGGTGGCATACCAGGAATGACCCCCAACAATGTGTTCAGCATTAGTTTTGTCAACAATCAAGATGAAGTTACTGTGACATGGAAAGTTCTTGACCCTTCAATTTTCTCTGTTATAACGGTGGATGGGTCTGGACAGATACAACAGCTAATATGGCAGGGAAAGCAGCAAGGCTGGGTTGCAGTTTGGTCAGACCCAATAGATGCTTGTGACAGCTATGGGAAGTGCGGTCCATTCGGGAATTGCGATCCCTACACAGTCAGTGGGTTCAATTGTACATGTTTTCCGGGATATGAACCCAACTCACCTCAAGATTGGGATATAAGGGATGGATCAGGTGGGTGCAAGAGACAGGAGGGGTCAATATCCATGTGTAGAAATGGCGAAGGGTTTGTGAAGATGGATCATGTGAAGGTTCCAGATACTTCTGCAATCAAATTAGAGACGAGTTTGAGTTTGGAAGCGTGTGAGAAGGAGTGTTTGAGTAACTGCTCGTGCTTGGCGTATGCGGTTGCAGATGTGAGGAATGGTGGGAGTGGATGCATGACATGGTATGGGGATCTCATGGATACTAAGCAATTTACAGAAGGAGGGGAAGCTTTGTATGTAAGAGCTGATGCAATGGTTTCAGTTCAGTATACAAAGAAGTCAGGAGGAGAGTCCTCTGCCAACAATGGGAGACTGGCTATTATATTGGGAGTGTCAATTTCTGTTGCCTCATTTCTCATCATTGCTGTTTTATGTTGGTTTAAGAGAAGGAAAACTAAAGGGAGAAGAGGACAACTGAAACTGCTGAATGATATTGCTTCTGGTTCAAGAAGCCGTGAAGATTTGCCAATTGAAAATGATGTTGATGAACAGAGAGGAAAGGCAGATTTACCTTTTTTTGATTTAAGCACCATAGTTGAAGCCACAGAGGAGTTCTCTTCTGCTAACATGCTTGGACATGGTGGCTTTGGCATAGTGTATAAGGTACTTTCCCTGAAACATTGTGATCGATCATCTCAGTCCAGTGATAAATTCACATTATGA

Protein Analysis

562

Amino Acids

61.64

Weight (kDa)

5.38

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 177 2e-32 D-mannose binding lectin
S_locus_glycop PF00954 210 - 320 2.9e-27 S-locus glycoprotein domain
PAN_2 PF08276 344 - 410 5.5e-21 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 773
AasI GACNNNNNNGTC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 1295
AciI CCGC 3 cut(s) 631, 885, 1166
AclI AACGTT 1 cut(s) 429
AclWI GGATC 4 cut(s) 899, 997, 1068, 1224
AcsI RAATTY 2 cut(s) 5, 1676
AcuI CTGAAG 1 cut(s) 23
AfaI GTAC 6 cut(s) 179, 194, 294, 608, 934, 1632
AfiI CCNNNNNNNGG 2 cut(s) 554, 1332
AflIII ACRYGT 1 cut(s) 935
AgeI ACCGGT 1 cut(s) 174
AgsI TTSAA 6 cut(s) 25, 759, 928, 1473, 1499, 1565
AjnI CCWGG 1 cut(s) 670
AjuI GAANNNNNNNTTGG 4 cut(s) 473, 505, 677, 709
AluBI AGCT 7 cut(s) 43, 382, 444, 805, 873, 1256, 1271
AluI AGCT 7 cut(s) 43, 382, 444, 805, 873, 1256, 1271
Alw26I GTCTC 7 cut(s) 124, 228, 352, 594, 1000, 1094, 1330
AlwI GGATC 4 cut(s) 899, 997, 1068, 1224
AlwNI CAGNNNCTG 1 cut(s) 385
Ama87I CYCGRG 1 cut(s) 547
AoxI GGCC 1 cut(s) 316
ApeKI GCWGC 2 cut(s) 374, 823
ApoI RAATTY 2 cut(s) 5, 1676
AsiGI ACCGGT 1 cut(s) 174
AspA2I CCTAGG 1 cut(s) 313
AspS9I GGNCC 2 cut(s) 409, 887
AsuC2I CCSGG 4 cut(s) 159, 548, 549, 945
AsuHPI GGTGA 1 cut(s) 954
AsuII TTCGAA 1 cut(s) 301
AvaI CYCGRG 1 cut(s) 547
AvaII GGWCC 2 cut(s) 409, 887
AvrII CCTAGG 1 cut(s) 313
BaeI ACNNNNGTAYC 2 cut(s) 169, 202
BauI CACGAG 1 cut(s) 1150
BbvI GCAGC 2 cut(s) 386, 835
BccI CCATC 6 cut(s) 86, 275, 568, 776, 980, 1051
BceAI ACGGC 2 cut(s) 121, 1464
BciT130I CCWGG 1 cut(s) 672
BciVI GTATCC 1 cut(s) 1219
BclI TGATCA 2 cut(s) 88, 448
BcnI CCSGG 4 cut(s) 159, 548, 549, 945
BcoDI GTCTC 7 cut(s) 124, 228, 352, 594, 1000, 1094, 1330
BfaI CTAG 3 cut(s) 168, 290, 314
BfmI CTRYAG 1 cut(s) 369
BfuI GTATCC 1 cut(s) 1219
BglII AGATCT 1 cut(s) 57
BisI GCNGC 2 cut(s) 375, 824
BlnI CCTAGG 1 cut(s) 313
BlsI GCNGC 2 cut(s) 376, 825
BmcAI AGTACT 1 cut(s) 294
Bme1390I CCNGG 5 cut(s) 159, 548, 549, 672, 945
Bme18I GGWCC 2 cut(s) 409, 887
BmeT110I CYCGRG 1 cut(s) 547
BmgT120I GGNCC 2 cut(s) 409, 887
BmiI GGNNCC 2 cut(s) 579, 1074
BmrFI CCNGG 5 cut(s) 159, 548, 549, 672, 945
BmrI ACTGGG 1 cut(s) 564
BmsI GCATC 4 cut(s) 516, 850, 1187, 1264
BmuI ACTGGG 1 cut(s) 564
BplI GAGNNNNNCTC 2 cut(s) 1565, 1597
BpmI CTGGAG 1 cut(s) 38
Bpu14I TTCGAA 1 cut(s) 301
BpuEI CTTGAG 1 cut(s) 951
BpuMI CCSGG 4 cut(s) 159, 548, 549, 945
Bsa29I ATCGAT 2 cut(s) 510, 1654
BsaBI GATNNNNATC 1 cut(s) 285
BsaI GGTCTC 2 cut(s) 124, 594
BsaJI CCNNGG 3 cut(s) 313, 547, 548
BsaWI WCCGGW 1 cut(s) 174
Bsc4I CCNNNNNNNGG 2 cut(s) 554, 1332
Bse118I RCCGGY 1 cut(s) 174
Bse1I ACTGG 4 cut(s) 390, 559, 1344, 1668
Bse3DI GCAATG 2 cut(s) 1284, 1386
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 1 cut(s) 672
BseCI ATCGAT 2 cut(s) 510, 1654
BseDI CCNNGG 3 cut(s) 313, 547, 548
BseGI GGATG 5 cut(s) 451, 579, 787, 991, 1202
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 2 cut(s) 554, 1332
BseMI GCAATG 2 cut(s) 1284, 1386
BseMII CTCAG 1 cut(s) 1676
BseNI ACTGG 4 cut(s) 390, 559, 1344, 1668
BseRI GAGGAG 2 cut(s) 1326, 1589
BseXI GCAGC 2 cut(s) 386, 835
BseYI CCCAGC 1 cut(s) 831
Bsh1285I CGRYCG 2 cut(s) 514, 635
BshFI GGCC 1 cut(s) 318
BshTI ACCGGT 1 cut(s) 174
BshVI ATCGAT 2 cut(s) 510, 1654
BsiEI CGRYCG 2 cut(s) 514, 635
BsiHKCI CYCGRG 1 cut(s) 547
BsiSI CCGG 4 cut(s) 159, 175, 548, 944
BslFI GGGAC 2 cut(s) 141, 565
BslI CCNNNNNNNGG 2 cut(s) 554, 1332
BsmAI GTCTC 7 cut(s) 124, 228, 352, 594, 1000, 1094, 1330
BsmBI CGTCTC 1 cut(s) 1094
BsmFI GGGAC 2 cut(s) 141, 565
BsmI GAATGC 1 cut(s) 31
BsnI GGCC 1 cut(s) 318
Bso31I GGTCTC 2 cut(s) 124, 594
BsoBI CYCGRG 1 cut(s) 547
Bsp119I TTCGAA 1 cut(s) 301
Bsp1407I TGTACA 2 cut(s) 606, 932
BspACI CCGC 3 cut(s) 631, 885, 1166
BspANI GGCC 1 cut(s) 318
BspCNI CTCAG 1 cut(s) 1675
BspDI ATCGAT 2 cut(s) 510, 1654
BspLI GGNNCC 2 cut(s) 579, 1074
BspPI GGATC 4 cut(s) 899, 997, 1068, 1224
BspT104I TTCGAA 1 cut(s) 301
BspTNI GGTCTC 2 cut(s) 124, 594
BsrDI GCAATG 2 cut(s) 1284, 1386
BsrFI RCCGGY 1 cut(s) 174
BsrGI TGTACA 2 cut(s) 606, 932
BsrI ACTGG 4 cut(s) 390, 559, 1344, 1668
BssAI RCCGGY 1 cut(s) 174
BssECI CCNNGG 3 cut(s) 313, 547, 548
BssNAI GTATAC 1 cut(s) 1296
BssSI CACGAG 1 cut(s) 1150
BssT1I CCWWGG 1 cut(s) 313
Bst1107I GTATAC 1 cut(s) 1296
Bst2BI CACGAG 1 cut(s) 1150
Bst2UI CCWGG 1 cut(s) 672
Bst4CI ACNGT 4 cut(s) 597, 733, 778, 916
Bst6I CTCTTC 2 cut(s) 1426, 1588
BstAUI TGTACA 2 cut(s) 606, 932
BstBI TTCGAA 1 cut(s) 301
BstDEI CTNAG 3 cut(s) 272, 1230, 1662
BstF5I GGATG 5 cut(s) 451, 579, 787, 991, 1202
BstMAI GTCTC 7 cut(s) 124, 228, 352, 594, 1000, 1094, 1330
BstMCI CGRYCG 2 cut(s) 514, 635
BstMWI GCNNNNNNNGC 3 cut(s) 168, 811, 820
BstNI CCWGG 1 cut(s) 672
BstNSI RCATGY 2 cut(s) 939, 1597
BstSCI CCNGG 5 cut(s) 157, 546, 547, 670, 943
BstSFI CTRYAG 1 cut(s) 369
BstV1I GCAGC 2 cut(s) 386, 835
BstX2I RGATCY 2 cut(s) 57, 1216
BstYI RGATCY 2 cut(s) 57, 1216
BstZ17I GTATAC 1 cut(s) 1296
Bsu15I ATCGAT 2 cut(s) 510, 1654
BsuI GTATCC 1 cut(s) 1219
BsuRI GGCC 1 cut(s) 318
BsuTUI ATCGAT 2 cut(s) 510, 1654
BtsCI GGATG 5 cut(s) 451, 579, 787, 991, 1202
BtsIMutI CAGTG 3 cut(s) 662, 925, 1675
CaiI CAGNNNCTG 1 cut(s) 385
Cfr10I RCCGGY 1 cut(s) 174
Cfr13I GGNCC 2 cut(s) 409, 887
Cfr9I CCCGGG 1 cut(s) 547
ClaI ATCGAT 2 cut(s) 510, 1654
Csp6I GTAC 6 cut(s) 178, 193, 293, 607, 933, 1631
CspAI ACCGGT 1 cut(s) 174
CviAII CATG 9 cut(s) 738, 936, 1027, 1064, 1201, 1206, 1222, 1594, 1604
CviQI GTAC 6 cut(s) 178, 193, 293, 607, 933, 1631
DdeI CTNAG 3 cut(s) 272, 1230, 1662
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
Eam1104I CTCTTC 2 cut(s) 1426, 1588
EarI CTCTTC 2 cut(s) 1426, 1588
Eco130I CCWWGG 1 cut(s) 313
Eco147I AGGCCT 1 cut(s) 318
Eco31I GGTCTC 2 cut(s) 124, 594
Eco47I GGWCC 2 cut(s) 409, 887
Eco57I CTGAAG 1 cut(s) 23
Eco88I CYCGRG 1 cut(s) 547
EcoRII CCWGG 1 cut(s) 670
EcoT14I CCWWGG 1 cut(s) 313
EcoT22I ATGCAT 2 cut(s) 31, 1202
ErhI CCWWGG 1 cut(s) 313
Esp3I CGTCTC 1 cut(s) 1094
FaeI CATG 9 cut(s) 741, 939, 1030, 1067, 1204, 1209, 1225, 1597, 1607
FaqI GGGAC 2 cut(s) 141, 565
FatI CATG 9 cut(s) 737, 935, 1026, 1063, 1200, 1205, 1221, 1593, 1603
FbaI TGATCA 2 cut(s) 88, 448
FblI GTMKAC 1 cut(s) 1295
Fnu4HI GCNGC 2 cut(s) 375, 824
FokI GGATG 5 cut(s) 438, 586, 794, 998, 1209
Fsp4HI GCNGC 2 cut(s) 375, 824
FspBI CTAG 3 cut(s) 168, 290, 314
GluI GCNGC 2 cut(s) 375, 824
GsaI CCCAGC 1 cut(s) 835
GsuI CTGGAG 1 cut(s) 38
HaeIII GGCC 1 cut(s) 318
HapII CCGG 4 cut(s) 159, 175, 548, 944
Hin1II CATG 9 cut(s) 741, 939, 1030, 1067, 1204, 1209, 1225, 1597, 1607
HincII GTYRAC 2 cut(s) 333, 712
HindII GTYRAC 2 cut(s) 333, 712
HindIII AAGCTT 1 cut(s) 1254
HinfI GANTC 5 cut(s) 147, 261, 389, 652, 1316
HpaII CCGG 4 cut(s) 159, 175, 548, 944
HphI GGTGA 1 cut(s) 954
Hpy166II GTNNAC 3 cut(s) 333, 712, 1296
Hpy188I TCNGA 4 cut(s) 205, 280, 448, 850
Hpy8I GTNNAC 3 cut(s) 333, 712, 1296
HpyAV CCTTC 7 cut(s) 56, 765, 1037, 1063, 1123, 1238, 1407
HpyCH4III ACNGT 4 cut(s) 597, 733, 778, 916
HpyCH4IV ACGT 2 cut(s) 180, 429
HpyCH4V TGCA 8 cut(s) 29, 473, 839, 1002, 1088, 1172, 1200, 1277
HpyF10VI GCNNNNNNNGC 3 cut(s) 168, 811, 820
HpyF3I CTNAG 3 cut(s) 272, 1230, 1662
HpySE526I ACGT 2 cut(s) 180, 429
Hsp92II CATG 9 cut(s) 741, 939, 1030, 1067, 1204, 1209, 1225, 1597, 1607
Ksp22I TGATCA 2 cut(s) 88, 448
LmnI GCTCC 1 cut(s) 48
Lsp1109I GCAGC 2 cut(s) 386, 835
LweI GCATC 4 cut(s) 516, 850, 1187, 1264
MaeI CTAG 3 cut(s) 168, 290, 314
MaeII ACGT 2 cut(s) 180, 429
MaeIII GTNAC 4 cut(s) 727, 733, 866, 1142
MboII GAAGA 6 cut(s) 41, 458, 1066, 1443, 1496, 1575
MfeI CAATTG 2 cut(s) 928, 1494
MflI RGATCY 2 cut(s) 57, 1216
MlyI GAGTC 1 cut(s) 1325
MmeI TCCRAC 2 cut(s) 436, 471
Mph1103I ATGCAT 2 cut(s) 31, 1202
MseI TTAA 3 cut(s) 99, 1407, 1550
MspI CCGG 4 cut(s) 159, 175, 548, 944
MspR9I CCNGG 5 cut(s) 159, 548, 549, 672, 945
MunI CAATTG 2 cut(s) 928, 1494
Mva1269I GAATGC 1 cut(s) 31
MvaI CCWGG 1 cut(s) 672
MwoI GCNNNNNNNGC 3 cut(s) 168, 811, 820
NciI CCSGG 4 cut(s) 159, 548, 549, 945
NlaIII CATG 9 cut(s) 741, 939, 1030, 1067, 1204, 1209, 1225, 1597, 1607
NlaIV GGNNCC 2 cut(s) 579, 1074
NmuCI GTSAC 2 cut(s) 733, 866
NsiI ATGCAT 2 cut(s) 31, 1202
NspI RCATGY 2 cut(s) 939, 1597
NspV TTCGAA 1 cut(s) 301
PceI AGGCCT 1 cut(s) 318
PciI ACATGT 1 cut(s) 935
PcsI WCGNNNNNNNCGW 2 cut(s) 900, 1157
PctI GAATGC 1 cut(s) 31
PfeI GAWTC 4 cut(s) 147, 261, 389, 652
PfoI TCCNGGA 1 cut(s) 943
PinAI ACCGGT 1 cut(s) 174
PkrI GCNGC 2 cut(s) 376, 825
Ple19I CGATCG 1 cut(s) 514
PleI GAGTC 1 cut(s) 1324
PpsI GAGTC 1 cut(s) 1324
PscI ACATGT 1 cut(s) 935
PsiI TTATAA 1 cut(s) 773
Psp1406I AACGTT 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 670
PspFI CCCAGC 1 cut(s) 831
PspGI CCWGG 1 cut(s) 670
PspN4I GGNNCC 2 cut(s) 579, 1074
PspPI GGNCC 2 cut(s) 409, 887
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 2 cut(s) 57, 1216
PvuI CGATCG 1 cut(s) 514
RsaI GTAC 6 cut(s) 179, 194, 294, 608, 934, 1632
RsaNI GTAC 6 cut(s) 178, 193, 293, 607, 933, 1631
SaqAI TTAA 3 cut(s) 99, 1407, 1550
SatI GCNGC 2 cut(s) 375, 824
Sau96I GGNCC 2 cut(s) 409, 887
ScaI AGTACT 1 cut(s) 294
SchI GAGTC 1 cut(s) 1325
ScrFI CCNGG 5 cut(s) 159, 548, 549, 672, 945
SfaNI GCATC 4 cut(s) 516, 850, 1187, 1264
SfcI CTRYAG 1 cut(s) 369
SfuI TTCGAA 1 cut(s) 301
SinI GGWCC 2 cut(s) 409, 887
SmaI CCCGGG 1 cut(s) 549
SmlI CTYRAG 1 cut(s) 966
SmoI CTYRAG 1 cut(s) 966
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 3 cut(s) 631, 885, 1166
SspMI CTAG 3 cut(s) 168, 290, 314
StuI AGGCCT 1 cut(s) 318
StyD4I CCNGG 5 cut(s) 157, 546, 547, 670, 943
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 4 cut(s) 597, 733, 778, 916
TaiI ACGT 2 cut(s) 183, 432
TaqI TCGA 4 cut(s) 122, 301, 510, 1654
TatI WGTACW 3 cut(s) 292, 606, 932
TfiI GAWTC 4 cut(s) 147, 261, 389, 652
Tru1I TTAA 3 cut(s) 99, 1407, 1550
Tru9I TTAA 3 cut(s) 99, 1407, 1550
TscAI CASTG 3 cut(s) 662, 925, 1675
TseFI GTSAC 2 cut(s) 733, 866
TseI GCWGC 2 cut(s) 374, 823
Tsp45I GTSAC 2 cut(s) 733, 866
TspDTI ATGAA 6 cut(s) 17, 144, 494, 738, 966, 1527
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 3 cut(s) 662, 925, 1675
VpaK11BI GGWCC 2 cut(s) 409, 887
XapI RAATTY 2 cut(s) 5, 1676
XceI RCATGY 2 cut(s) 939, 1597
XmaI CCCGGG 1 cut(s) 547
XmaJI CCTAGG 1 cut(s) 313
XmiI GTMKAC 1 cut(s) 1295
XspI CTAG 3 cut(s) 168, 290, 314
ZrmI AGTACT 1 cut(s) 294
Zsp2I ATGCAT 2 cut(s) 31, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.