RchiOBHm_Chr5g0035881

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Reverse (-)
29928083 .. 29929381
1299 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31472

Sequence Viewer

Length: 1299 bp
ATGAGTTTCAGTATCGAAGCGTTTATCAAGATATTACTTCTCTTCCTTCATCTCCCCTCTAGCATTTGCCAGCTTTCCCTTGACGCCCTTAAGCCAAACCATCCCATCAGAGACGGTGACATTTTAGTCTCTAGCGCGCAAATCTTTGCACTAGGGTTCTTCAGCCCTGGAAATCCTCAGCACCGCTATGTTGGAGTTTGGTATAACAAAGTTCCAGAGCAAACCGTTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAAGTAGTCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCATACAATTTTATAGCCAAACTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTCAATTACCCCTCAGATACATTGCTTTCCTTTATGAAGATGGGGCTGAACCGGCGGTCCGGGTTGGAGTGGCACCTAACATCTTGGAAGTCAAAAGATGACCCCGGAACTGGGAGTTTTACATATGGGATAGACCCGATGGGGTTTCCGCAGTTGTTTCTGTGCAAAGGTAGAGAAGCATTGTGGCGGGCCGGCCCTTGGATCGGGGACAGATTGAGCGCTCTACCTGTAATGACGGCTACCGTCTACAATGCAAGTTTTGTCAACAATGAAGACGAGATATCCTTAGTGTTTGCTGTTGCTAAGGAGTCATTGATCACAAGGGTGGTGATAGATGAATCAGGAATATTTCAAGCGTTCGTGTGGAATGATCAATGGATCAAATTCTACTCCCACCCGACTGAGTGGTGTGATTACTATGGACAGTGCGGTCCAAATACTAACTGTGACTCAGAGAAGGACTATAAGTTGGCTTGCACATGCCTACCTGGGTTCGAATCCAAATCACCTAGTTTGAGTGTTGGTGAAAGTGGATGCATTAGGAAAGCGGGAGCATCCATATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGTGTGTAAAAATACCGGACTCATCTATGGCATATGTGAACATGAGTATGAGTTTGGAAGAGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACAGCTTACACGAGTGCGGATGACCGAGGAGGTGGGATCGGGTGTGTGACATGGCACGGGGACTTGATGGACATGAGGACTGTCTCCGATGTTGGTCAAGATTTATATGTTCGAGTCGATGTAACTTCTTTAGGTACGTTCTTTATGTTTATAATACTACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

432

Amino Acids

47.75

Weight (kDa)

5.14

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 1.9e-32 D-mannose binding lectin
S_locus_glycop PF00954 211 - 317 1.6e-23 S-locus glycoprotein domain
PAN_2 PF08276 337 - 403 1.6e-21 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1286
AasI GACNNNNNNGTC 3 cut(s) 125, 254, 876
AccB1I GGYRCC 1 cut(s) 519
AccI GTMKAC 1 cut(s) 693
AccII CGCG 1 cut(s) 137
AciI CCGC 8 cut(s) 184, 342, 502, 596, 634, 876, 995, 1151
AclI AACGTT 1 cut(s) 348
AclWI GGATC 3 cut(s) 656, 833, 1178
AcsI RAATTY 1 cut(s) 830
AcuI CTGAAG 1 cut(s) 145
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 1 cut(s) 1270
AfeI AGCGCT 1 cut(s) 667
AfiI CCNNNNNNNGG 5 cut(s) 231, 557, 558, 645, 650
AflII CTTAAG 1 cut(s) 89
AgsI TTSAA 2 cut(s) 451, 800
AjnI CCWGG 2 cut(s) 166, 934
AleI CACNNNNGTG 1 cut(s) 770
AloI GAACNNNNNNTCC 2 cut(s) 488, 520
AluBI AGCT 2 cut(s) 73, 1139
AluI AGCT 2 cut(s) 73, 1139
Alw26I GTCTC 4 cut(s) 105, 133, 240, 1222
AlwI GGATC 3 cut(s) 656, 833, 1178
Aor51HI AGCGCT 1 cut(s) 667
AoxI GGCC 3 cut(s) 298, 636, 640
ApoI RAATTY 1 cut(s) 830
AspLEI GCGC 3 cut(s) 137, 139, 668
AspS9I GGNCC 6 cut(s) 319, 339, 504, 636, 641, 878
AsuC2I CCSGG 2 cut(s) 508, 552
AsuHPI GGTGA 6 cut(s) 128, 302, 354, 787, 945, 983
AsuII TTCGAA 1 cut(s) 942
AvaII GGWCC 4 cut(s) 319, 339, 504, 878
BanI GGYRCC 1 cut(s) 519
BauI CACGAG 1 cut(s) 1144
BbsI GAAGAC 1 cut(s) 726
BbvCI CCTCAGC 1 cut(s) 177
BccI CCATC 7 cut(s) 108, 113, 287, 481, 580, 1114, 1195
BceAI ACGGC 1 cut(s) 699
BciT130I CCWGG 2 cut(s) 168, 936
BciVI GTATCC 1 cut(s) 385
BclI TGATCA 2 cut(s) 762, 817
BcnI CCSGG 2 cut(s) 508, 552
BcoDI GTCTC 4 cut(s) 105, 133, 240, 1222
BfaI CTAG 5 cut(s) 60, 132, 152, 957, 1297
BfoI RGCGCY 1 cut(s) 669
BfrI CTTAAG 1 cut(s) 89
BfuI GTATCC 1 cut(s) 385
Bme1390I CCNGG 4 cut(s) 168, 508, 552, 936
Bme18I GGWCC 4 cut(s) 319, 339, 504, 878
BmgT120I GGNCC 6 cut(s) 319, 339, 504, 636, 641, 878
BmiI GGNNCC 2 cut(s) 321, 521
BmrFI CCNGG 4 cut(s) 168, 508, 552, 936
BmrI ACTGGG 2 cut(s) 248, 567
BmsI GCATC 2 cut(s) 971, 1010
BmuI ACTGGG 2 cut(s) 248, 567
BpiI GAAGAC 1 cut(s) 726
Bpu10I CCTNAGC 2 cut(s) 177, 750
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 2 cut(s) 508, 552
Bsa29I ATCGAT 1 cut(s) 281
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 5 cut(s) 166, 550, 644, 935, 1159
BsaWI WCCGGW 1 cut(s) 1054
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 5 cut(s) 231, 557, 558, 645, 650
Bse118I RCCGGY 2 cut(s) 498, 638
Bse1I ACTGG 2 cut(s) 254, 562
Bse3DI GCAATG 1 cut(s) 467
BseBI CCWGG 2 cut(s) 168, 936
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 5 cut(s) 166, 550, 644, 935, 1159
BseGI GGATG 4 cut(s) 100, 986, 1001, 1159
BseLI CCNNNNNNNGG 5 cut(s) 231, 557, 558, 645, 650
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 4 cut(s) 191, 474, 840, 912
BseNI ACTGG 2 cut(s) 254, 562
BsePI GCGCGC 1 cut(s) 135
BseRI GAGGAG 1 cut(s) 1176
Bsh1236I CGCG 1 cut(s) 137
BshFI GGCC 3 cut(s) 300, 638, 642
BshNI GGYRCC 1 cut(s) 519
BshVI ATCGAT 1 cut(s) 281
BsiSI CCGG 5 cut(s) 499, 507, 552, 639, 1055
BslFI GGGAC 2 cut(s) 668, 1208
BslI CCNNNNNNNGG 5 cut(s) 231, 557, 558, 645, 650
BsmAI GTCTC 4 cut(s) 105, 133, 240, 1222
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 668, 1208
BsnI GGCC 3 cut(s) 300, 638, 642
Bsp119I TTCGAA 1 cut(s) 942
Bsp143I GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
BspACI CCGC 8 cut(s) 184, 342, 502, 596, 634, 876, 995, 1151
BspANI GGCC 3 cut(s) 300, 638, 642
BspCNI CTCAG 4 cut(s) 190, 473, 841, 911
BspDI ATCGAT 1 cut(s) 281
BspFNI CGCG 1 cut(s) 137
BspLI GGNNCC 2 cut(s) 321, 521
BspPI GGATC 3 cut(s) 656, 833, 1178
BspT104I TTCGAA 1 cut(s) 942
BspT107I GGYRCC 1 cut(s) 519
BspTI CTTAAG 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 467
BsrFI RCCGGY 2 cut(s) 498, 638
BsrI ACTGG 2 cut(s) 254, 562
BssAI RCCGGY 2 cut(s) 498, 638
BssECI CCNNGG 5 cut(s) 166, 550, 644, 935, 1159
BssHII GCGCGC 1 cut(s) 135
BssMI GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 1 cut(s) 1144
BssT1I CCWWGG 1 cut(s) 644
Bst2BI CACGAG 1 cut(s) 1144
Bst2UI CCWGG 2 cut(s) 168, 936
Bst4CI ACNGT 6 cut(s) 116, 226, 691, 873, 893, 1216
Bst6I CTCTTC 3 cut(s) 47, 364, 1092
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 89
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 5 cut(s) 71, 137, 636, 640, 922
BstDEI CTNAG 6 cut(s) 177, 460, 733, 750, 849, 898
BstF5I GGATG 4 cut(s) 100, 986, 1001, 1159
BstFNI CGCG 1 cut(s) 137
BstH2I RGCGCY 1 cut(s) 669
BstHHI GCGC 3 cut(s) 137, 139, 668
BstKTI GATC 6 cut(s) 285, 651, 765, 820, 828, 1173
BstMAI GTCTC 4 cut(s) 105, 133, 240, 1222
BstMBI GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
BstMWI GCNNNNNNNGC 1 cut(s) 499
BstNI CCWGG 2 cut(s) 168, 936
BstNSI RCATGY 1 cut(s) 930
BstSCI CCNGG 4 cut(s) 166, 506, 550, 934
BstUI CGCG 1 cut(s) 137
BstV2I GAAGAC 1 cut(s) 726
BstXI CCANNNNNNTGG 1 cut(s) 388
Bsu15I ATCGAT 1 cut(s) 281
BsuI GTATCC 1 cut(s) 385
BsuRI GGCC 3 cut(s) 300, 638, 642
BsuTUI ATCGAT 1 cut(s) 281
BtsCI GGATG 4 cut(s) 100, 986, 1001, 1159
BtsIMutI CAGTG 1 cut(s) 878
Cac8I GCNNGC 5 cut(s) 71, 137, 636, 640, 922
CfoI GCGC 3 cut(s) 137, 139, 668
Cfr10I RCCGGY 2 cut(s) 498, 638
Cfr13I GGNCC 6 cut(s) 319, 339, 504, 636, 641, 878
ClaI ATCGAT 1 cut(s) 281
CpoI CGGWCCG 1 cut(s) 504
CseI GACGC 1 cut(s) 92
Csp6I GTAC 1 cut(s) 1269
CspI CGGWCCG 1 cut(s) 504
CviAII CATG 5 cut(s) 311, 927, 1081, 1185, 1207
CviQI GTAC 1 cut(s) 1269
DdeI CTNAG 6 cut(s) 177, 460, 733, 750, 849, 898
DpnI GATC 6 cut(s) 284, 650, 764, 819, 827, 1172
DpnII GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
DrdI GACNNNNNNGTC 3 cut(s) 125, 254, 876
DseDI GACNNNNNNGTC 3 cut(s) 125, 254, 876
Eam1104I CTCTTC 3 cut(s) 47, 364, 1092
EarI CTCTTC 3 cut(s) 47, 364, 1092
Eco130I CCWWGG 1 cut(s) 644
Eco147I AGGCCT 1 cut(s) 300
Eco32I GATATC 1 cut(s) 729
Eco47I GGWCC 4 cut(s) 319, 339, 504, 878
Eco47III AGCGCT 1 cut(s) 667
Eco57I CTGAAG 1 cut(s) 145
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 2 cut(s) 166, 934
EcoRV GATATC 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 644
EcoT22I ATGCAT 1 cut(s) 986
ErhI CCWWGG 1 cut(s) 644
Esp3I CGTCTC 1 cut(s) 105
FaeI CATG 5 cut(s) 314, 930, 1084, 1188, 1210
FaqI GGGAC 2 cut(s) 668, 1208
FatI CATG 5 cut(s) 310, 926, 1080, 1184, 1206
FauI CCCGC 2 cut(s) 627, 988
FauNDI CATATG 3 cut(s) 571, 1007, 1072
FbaI TGATCA 2 cut(s) 762, 817
FblI GTMKAC 1 cut(s) 693
FokI GGATG 4 cut(s) 87, 988, 993, 1166
FseI GGCCGGCC 1 cut(s) 642
FspBI CTAG 5 cut(s) 60, 132, 152, 957, 1297
GlaI GCGC 3 cut(s) 136, 138, 667
HaeII RGCGCY 1 cut(s) 669
HaeIII GGCC 3 cut(s) 300, 638, 642
HapII CCGG 5 cut(s) 499, 507, 552, 639, 1055
HgaI GACGC 1 cut(s) 92
HhaI GCGC 3 cut(s) 137, 139, 668
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 5 cut(s) 314, 930, 1084, 1188, 1210
Hin6I GCGC 3 cut(s) 135, 137, 666
HinP1I GCGC 3 cut(s) 135, 137, 666
HincII GTYRAC 1 cut(s) 712
HindII GTYRAC 1 cut(s) 712
HinfI GANTC 7 cut(s) 263, 755, 785, 896, 944, 1058, 1248
HpaII CCGG 5 cut(s) 499, 507, 552, 639, 1055
HphI GGTGA 6 cut(s) 128, 302, 354, 787, 945, 983
Hpy166II GTNNAC 3 cut(s) 694, 712, 1078
Hpy188I TCNGA 4 cut(s) 110, 463, 901, 1222
Hpy188III TCNNGA 5 cut(s) 28, 215, 789, 1030, 1232
Hpy8I GTNNAC 3 cut(s) 694, 712, 1078
HpyAV CCTTC 5 cut(s) 56, 437, 898, 1016, 1027
HpyCH4III ACNGT 6 cut(s) 116, 226, 691, 873, 893, 1216
HpyCH4IV ACGT 2 cut(s) 348, 1271
HpyCH4V TGCA 7 cut(s) 149, 612, 701, 924, 984, 1104, 1134
HpyF10VI GCNNNNNNNGC 1 cut(s) 499
HpyF3I CTNAG 6 cut(s) 177, 460, 733, 750, 849, 898
HpySE526I ACGT 2 cut(s) 348, 1271
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 5 cut(s) 314, 930, 1084, 1188, 1210
HspAI GCGC 3 cut(s) 135, 137, 666
KroI GCCGGC 1 cut(s) 638
KroNI GCCGGC 1 cut(s) 640
Ksp22I TGATCA 2 cut(s) 762, 817
Kzo9I GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
LmnI GCTCC 1 cut(s) 998
LweI GCATC 2 cut(s) 971, 1010
MaeI CTAG 5 cut(s) 60, 132, 152, 957, 1297
MaeII ACGT 2 cut(s) 348, 1271
MaeIII GTNAC 5 cut(s) 116, 349, 893, 1180, 1255
MalI GATC 6 cut(s) 284, 650, 764, 819, 827, 1172
MboI GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
MboII GAAGA 6 cut(s) 34, 151, 351, 496, 731, 1109
MluCI AATT 3 cut(s) 370, 451, 830
MlyI GAGTC 4 cut(s) 764, 890, 1052, 1257
MmeI TCCRAC 2 cut(s) 172, 492
MnlI CCTC 8 cut(s) 67, 186, 290, 342, 469, 1154, 1157, 1203
Mph1103I ATGCAT 1 cut(s) 986
MroNI GCCGGC 1 cut(s) 638
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 4 cut(s) 186, 770, 1006, 1085
MspCI CTTAAG 1 cut(s) 89
MspI CCGG 5 cut(s) 499, 507, 552, 639, 1055
MspR9I CCNGG 4 cut(s) 168, 508, 552, 936
MvaI CCWGG 2 cut(s) 168, 936
MvnI CGCG 1 cut(s) 137
MwoI GCNNNNNNNGC 1 cut(s) 499
NaeI GCCGGC 1 cut(s) 640
NciI CCSGG 2 cut(s) 508, 552
NdeI CATATG 3 cut(s) 571, 1007, 1072
NdeII GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
NgoMIV GCCGGC 1 cut(s) 638
NlaIII CATG 5 cut(s) 314, 930, 1084, 1188, 1210
NlaIV GGNNCC 2 cut(s) 321, 521
NmuCI GTSAC 3 cut(s) 116, 893, 1180
NsiI ATGCAT 1 cut(s) 986
NspI RCATGY 1 cut(s) 930
NspV TTCGAA 1 cut(s) 942
OliI CACNNNNGTG 1 cut(s) 770
PauI GCGCGC 1 cut(s) 135
PceI AGGCCT 1 cut(s) 300
PdiI GCCGGC 1 cut(s) 640
PfeI GAWTC 3 cut(s) 263, 785, 944
PleI GAGTC 4 cut(s) 763, 890, 1052, 1256
PpsI GAGTC 4 cut(s) 763, 890, 1052, 1256
PpuMI RGGWCCY 1 cut(s) 319
PsiI TTATAA 1 cut(s) 1286
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 166, 934
PspGI CCWGG 2 cut(s) 166, 934
PspN4I GGNNCC 2 cut(s) 321, 521
PspPI GGNCC 6 cut(s) 319, 339, 504, 636, 641, 878
PspPPI RGGWCCY 1 cut(s) 319
PteI GCGCGC 1 cut(s) 135
RigI GGCCGGCC 1 cut(s) 642
RsaI GTAC 1 cut(s) 1270
RsaNI GTAC 1 cut(s) 1269
RseI CAYNNNNRTG 4 cut(s) 186, 770, 1006, 1085
Rsr2I CGGWCCG 1 cut(s) 504
RsrII CGGWCCG 1 cut(s) 504
SaqAI TTAA 1 cut(s) 90
Sau3AI GATC 6 cut(s) 282, 648, 762, 817, 825, 1170
Sau96I GGNCC 6 cut(s) 319, 339, 504, 636, 641, 878
SchI GAGTC 4 cut(s) 764, 890, 1052, 1257
ScrFI CCNGG 4 cut(s) 168, 508, 552, 936
SfaNI GCATC 2 cut(s) 971, 1010
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 4 cut(s) 319, 339, 504, 878
SmiMI CAYNNNNRTG 4 cut(s) 186, 770, 1006, 1085
SmlI CTYRAG 2 cut(s) 89, 413
SmoI CTYRAG 2 cut(s) 89, 413
Sse9I AATT 3 cut(s) 370, 451, 830
SseBI AGGCCT 1 cut(s) 300
SsiI CCGC 8 cut(s) 184, 342, 502, 596, 634, 876, 995, 1151
SspI AATATT 1 cut(s) 795
SspMI CTAG 5 cut(s) 60, 132, 152, 957, 1297
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 4 cut(s) 166, 506, 550, 934
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 6 cut(s) 116, 226, 691, 873, 893, 1216
TaiI ACGT 2 cut(s) 351, 1274
TaqI TCGA 5 cut(s) 15, 281, 942, 1246, 1251
TaqII GACCGA 1 cut(s) 1173
TasI AATT 3 cut(s) 370, 451, 830
TfiI GAWTC 3 cut(s) 263, 785, 944
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TscAI CASTG 1 cut(s) 878
TseFI GTSAC 3 cut(s) 116, 893, 1180
Tsp45I GTSAC 3 cut(s) 116, 893, 1180
TspDTI ATGAA 4 cut(s) 38, 497, 732, 798
TspRI CASTG 1 cut(s) 878
Vha464I CTTAAG 1 cut(s) 89
VpaK11BI GGWCC 4 cut(s) 319, 339, 504, 878
XapI RAATTY 1 cut(s) 830
XceI RCATGY 1 cut(s) 930
XmiI GTMKAC 1 cut(s) 693
XspI CTAG 5 cut(s) 60, 132, 152, 957, 1297
Zsp2I ATGCAT 1 cut(s) 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.