FvH4_3g03242

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
1746423 .. 1750099
3677 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03242.t1

Sequence Viewer

Length: 2502 bp
ATGAGTTTCAGTATCGAACCGTTTATCCAGATAATGCTTATTCTCTTCCTTCTTCTTCTAGCTTCTCCAACTTGCCAGCTTCCCCTTGACGCCCTTACGCCAAACCAACCCGTCAGAGACGGCGACGTTTTAGTCTCTAGCAGGAAAATCTTTGCGCTAGGGTTCTTCAGCCCCGGAAATTCCCAGCACCGCTATGTTGGAGTTTGGTACAACAATGTTCCAAACCAAACCGTAGTCTGGGTTGCCAACAGAGACAACCCAGTTAATGATTCCTCTGCAGTGCTATCGATCAATGGTGATGGAGGCCTCGTCATACACGGAAATGACTCAAGTAACCCTCTTTGGTCAGCAAACGTTACTCTCTCTTCACCAAACAATTCTACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTGCTTGAGAATGAAAGCCAAAGGTTAATATGGCAAGGCTTCGATTACCCCTCAAATATTCTCCTTCCATATATGAAACTTGGATATAACAGACGGTCCAGGATGAACTGGTTACTAACAACTTGGAAGTCCCAAGATGACCCAGGAACAGGCAACTGTTCTTATGGGATCAGCCCAACTGGGCTCCCGCAACTAGTTTTGCACCAAGGTGGAGCTCCCCGGTATCGGACTCTAATCGGATTTTATACTGGGAAGCTATGGAGGGGTTCGGTGAGTTACATCAACAATGAAGATGAGGTTTCCGTCATGTATGTTCCAGACAATGAGTCAACTTTAACAGCAAGGACTACGCTAGATGAATCAGGAATCTTGGAACGGTCCGCATGGAATGATCGAGTACATGAATGGAACATGTACTGGTCTGCTCCGGTAGAGCGTTGTGATATGTATGGACAGTGCGGTCCGAATGGAAACTGTAACCCTTACGATGTGGATGCCATCCATTGCACTTGCTTACCCGGTTATGAACCAAAGTCACTAGATGGTTGGTATGATTGGTACTGGAAAGGTGCATCGGGTGGGTGCTTAAGGCGAAATGGAGGAGTGTCAATGTGTGGAAATGGGGAAGGATTTGTAAAGGTGGAACGTGTGAAAATACCGGACTTGTCTAAGGCAAGTTTTGACATGAACTTGAATTTGAAGGAATGTGAGCAAGTGTGCTTGAAAAATTGTTCTTGCATGGCATACTCGAGTTCTGATGAGGGCAGCGGATGTGTGACTTGGCCAGGGGATTTGATGGACATAAGAACACTTGCTGATGCTGGCCAAGTATTATATGTGAGAGTTGATGCAATTGTCTTAGCTCAATATGCAAAGAAGTCGAATGATCTTAGCACGAAGGGAAAAGTGACAGTTTCGCTGGCATCTGTTCTGGTGCTCTTTCTTGTGTTTTCTCTAGTGGTTTGGTTGGTAAGGAGGAAGAGAAATGGTACAAGAAGACAAAATGAATTTATATTTGGACACAGCATAGGGTCATACCAGGGGCAATCTAGTGGTAGAACAAATGTTGATGATACTAGGCCAGATCTACCATTCTTTGATCTCACAATCGTAGCAGCAGCAACAAATAATTTCTCTATTGAAAACAAGCTTGGAACAGGTGGTTTTGGCTCTGTCTATAAGGGCGTGCTTTCTAATGGAAAGGAAATAGCAGTGAAAAGACTATCGCAGAATTCATGCCAAGGAACTGAAGAATTCAAAAATGAAGTGTTGCTGATCTCAAAACTCCAACATAGGAACCTTGTCAGAATTTTAGGTTGTTGCGTTCAAGATGAGGAGAAGATGATTATCTATGAATACTTGCCAAACAAAAGTTTGGACTTCTTCATTTTCAATGAATCCAACAAAGCTGATTTAGATTGGACGAGACGCTTTGAAATCATTTGTGGAATTGTTAGAGGGATCTTGTATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCCAGCAATATTCTGCTAGACGCTTCCATGAATCCCAAAATTGCGGACTTTGGTATGGCTAGAATATTTAGGGGAGATCAAAATGAAGCAAATACGAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAGTATGCATTGCGAGGACGATTTTCTGTAAAATCAGATGTATATAGCTTTGGGGTTTTGCTACTGGAAATCATTACGGGCAGAAAGAACAGAGTTTATTACCAAGAGGAATCTCCAGACTCAAATTTGGTCGAACATGTTTGGAACTTGTGGCTTGAAAGTAATGCCTTGGAAGTCGTTGATCCATCTCTGGGTGAATCATACCCTAGGAATGAAGTCCTGAGATGTATCCACATTGCTCTCTTGTGTGTGCAAGAGTATGCAATTGACCGGCCAACCATGTCTGCAGTTCTTAACATGTTAGGTAATGACGCAGCACTTCCTTCACCTAGACAATCTGCATTTCTGTTGCAGAGAAATGCTACTAGTGGAGATTCATCAACCAAAGATGGAGCTGATTCTGTAAATGACGTGACATGTACTATGGTAGAAGCTCGATAA

Protein Analysis

834

Amino Acids

92.99

Weight (kDa)

5.81

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 181 3.6e-33 D-mannose binding lectin
S_locus_glycop PF00954 230 - 317 2.2e-19 S-locus glycoprotein domain
PAN_2 PF08276 343 - 406 5e-21 PAN-like domain
PK_Tyr_Ser-Thr PF07714 517 - 787 4e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 517 - 723 4.1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 131, 873
AciI CCGC 6 cut(s) 190, 602, 795, 873, 1182, 1973
AclI AACGTT 1 cut(s) 354
AclWI GGATC 3 cut(s) 590, 1883, 2237
AcoI YGGCCR 3 cut(s) 1196, 1237, 2333
AcsI RAATTY 7 cut(s) 178, 1108, 1421, 1645, 1667, 1722, 2185
AcuI CTGAAG 2 cut(s) 151, 1683
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 6 cut(s) 209, 813, 830, 974, 1405, 2482
AfiI CCNNNNNNNGG 4 cut(s) 237, 563, 639, 2252
AflII CTTAAG 1 cut(s) 1000
AflIII ACRYGT 5 cut(s) 825, 1060, 2197, 2358, 2477
AhdI GACNNNNNGTC 1 cut(s) 739
AhlI ACTAGT 2 cut(s) 607, 2426
AjiI CACGTC 1 cut(s) 2473
AjnI CCWGG 4 cut(s) 512, 556, 1198, 1452
AjuI GAANNNNNNNTTGG 4 cut(s) 1413, 1445, 1548, 1580
AleI CACNNNNGTG 1 cut(s) 621
AloI GAACNNNNNNTCC 2 cut(s) 9, 41
Alw21I GWGCWC 2 cut(s) 631, 1353
Alw26I GTCTC 4 cut(s) 111, 139, 246, 1834
AlwI GGATC 3 cut(s) 590, 1883, 2237
Ama87I CYCGRG 1 cut(s) 1162
AoxI GGCC 6 cut(s) 304, 1196, 1237, 1493, 1929, 2333
ApeKI GCWGC 4 cut(s) 1179, 1529, 1532, 2375
ApoI RAATTY 7 cut(s) 178, 1108, 1421, 1645, 1667, 1722, 2185
AspA2I CCTAGG 1 cut(s) 2267
AspLEI GCGC 1 cut(s) 157
AspS9I GGNCC 3 cut(s) 510, 792, 875
AsuC2I CCSGG 3 cut(s) 174, 634, 933
AsuHPI GGTGA 6 cut(s) 308, 360, 697, 2049, 2267, 2379
AvaI CYCGRG 1 cut(s) 1162
AvaII GGWCC 3 cut(s) 510, 792, 875
AvrII CCTAGG 1 cut(s) 2267
BalI TGGCCA 2 cut(s) 1198, 1239
BanII GRGCYC 2 cut(s) 600, 631
BbsI GAAGAC 1 cut(s) 1417
Bbv12I GWGCWC 2 cut(s) 631, 1353
BbvI GCAGC 4 cut(s) 1191, 1541, 1544, 2387
BccI CCATC 6 cut(s) 293, 920, 950, 1204, 2254, 2444
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 6 cut(s) 267, 301, 890, 924, 1275, 1309
BciT130I CCWGG 4 cut(s) 514, 558, 1200, 1454
BciVI GTATCC 2 cut(s) 391, 2300
BcnI CCSGG 3 cut(s) 174, 634, 933
BcoDI GTCTC 4 cut(s) 111, 139, 246, 1834
BcuI ACTAGT 2 cut(s) 607, 2426
BfmI CTRYAG 3 cut(s) 276, 381, 2346
BfrI CTTAAG 1 cut(s) 1000
BfuI GTATCC 2 cut(s) 391, 2300
BglII AGATCT 2 cut(s) 1498, 1921
BisI GCNGC 4 cut(s) 1180, 1530, 1533, 2376
BlnI CCTAGG 1 cut(s) 2267
BlsI GCNGC 4 cut(s) 1181, 1531, 1534, 2377
Bme1390I CCNGG 7 cut(s) 174, 514, 558, 634, 933, 1200, 1454
Bme18I GGWCC 3 cut(s) 510, 792, 875
BmeRI GACNNNNNGTC 1 cut(s) 739
BmeT110I CYCGRG 1 cut(s) 1162
BmgBI CACGTC 1 cut(s) 2473
BmgT120I GGNCC 3 cut(s) 510, 792, 875
BmiI GGNNCC 2 cut(s) 599, 1712
BmrFI CCNGG 7 cut(s) 174, 514, 558, 634, 933, 1200, 1454
BmrI ACTGGG 3 cut(s) 254, 603, 672
BmsI GCATC 5 cut(s) 898, 995, 1222, 1252, 1346
BmuI ACTGGG 3 cut(s) 254, 603, 672
BpiI GAAGAC 1 cut(s) 1417
BpmI CTGGAG 1 cut(s) 2160
BpuEI CTTGAG 2 cut(s) 313, 440
BpuMI CCSGG 3 cut(s) 174, 634, 933
Bsa29I ATCGAT 1 cut(s) 287
BsaBI GATNNNNATC 1 cut(s) 1760
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 9 cut(s) 172, 556, 619, 632, 1199, 1453, 1654, 2229, 2267
BsaWI WCCGGW 2 cut(s) 841, 1072
BsaXI ACNNNNNCTCC 2 cut(s) 294, 324
Bsc4I CCNNNNNNNGG 4 cut(s) 237, 563, 639, 2252
Bse118I RCCGGY 1 cut(s) 2331
Bse1I ACTGG 7 cut(s) 260, 527, 598, 667, 836, 980, 2130
Bse3DI GCAATG 3 cut(s) 916, 2069, 2295
Bse8I GATNNNNATC 1 cut(s) 1760
BseBI CCWGG 4 cut(s) 514, 558, 1200, 1454
BseCI ATCGAT 1 cut(s) 287
BseDI CCNNGG 9 cut(s) 172, 556, 619, 632, 1199, 1453, 1654, 2229, 2267
BseGI GGATG 5 cut(s) 522, 912, 913, 1190, 1911
BseJI GATNNNNATC 1 cut(s) 1760
BseLI CCNNNNNNNGG 4 cut(s) 237, 563, 639, 2252
BseMI GCAATG 3 cut(s) 916, 2069, 2295
BseMII CTCAG 1 cut(s) 2273
BseNI ACTGG 7 cut(s) 260, 527, 598, 667, 836, 980, 2130
BseRI GAGGAG 2 cut(s) 1029, 1763
BseXI GCAGC 4 cut(s) 1191, 1541, 1544, 2387
BseYI CCCAGC 1 cut(s) 183
BshFI GGCC 6 cut(s) 306, 1198, 1239, 1495, 1931, 2335
BshVI ATCGAT 1 cut(s) 287
BsiHKAI GWGCWC 2 cut(s) 631, 1353
BsiHKCI CYCGRG 1 cut(s) 1162
BsiSI CCGG 6 cut(s) 174, 634, 842, 933, 1073, 2332
BslFI GGGAC 1 cut(s) 529
BslI CCNNNNNNNGG 4 cut(s) 237, 563, 639, 2252
BsmAI GTCTC 4 cut(s) 111, 139, 246, 1834
BsmBI CGTCTC 2 cut(s) 111, 1834
BsmFI GGGAC 1 cut(s) 529
BsnI GGCC 6 cut(s) 306, 1198, 1239, 1495, 1931, 2335
BsoBI CYCGRG 1 cut(s) 1162
Bsp1286I GDGCHC 3 cut(s) 600, 631, 1353
BspACI CCGC 6 cut(s) 190, 602, 795, 873, 1182, 1973
BspANI GGCC 6 cut(s) 306, 1198, 1239, 1495, 1931, 2335
BspCNI CTCAG 1 cut(s) 2274
BspDI ATCGAT 1 cut(s) 287
BspLI GGNNCC 2 cut(s) 599, 1712
BspMAI CTGCAG 2 cut(s) 280, 2350
BspPI GGATC 3 cut(s) 590, 1883, 2237
BspTI CTTAAG 1 cut(s) 1000
BsrDI GCAATG 3 cut(s) 916, 2069, 2295
BsrFI RCCGGY 1 cut(s) 2331
BsrI ACTGG 7 cut(s) 260, 527, 598, 667, 836, 980, 2130
BssAI RCCGGY 1 cut(s) 2331
BssECI CCNNGG 9 cut(s) 172, 556, 619, 632, 1199, 1453, 1654, 2229, 2267
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 4 cut(s) 619, 1654, 2229, 2267
Bst2UI CCWGG 4 cut(s) 514, 558, 1200, 1454
Bst4CI ACNGT 8 cut(s) 21, 232, 510, 572, 792, 870, 890, 1327
Bst6I CTCTTC 3 cut(s) 50, 370, 1388
BstACI GRCGYC 1 cut(s) 90
BstAFI CTTAAG 1 cut(s) 1000
BstC8I GCNNGC 5 cut(s) 77, 1237, 1335, 1601, 1933
BstDEI CTNAG 4 cut(s) 1083, 1273, 1304, 2282
BstF5I GGATG 5 cut(s) 522, 912, 913, 1190, 1911
BstHHI GCGC 1 cut(s) 157
BstMAI GTCTC 4 cut(s) 111, 139, 246, 1834
BstMWI GCNNNNNNNGC 1 cut(s) 1283
BstNI CCWGG 4 cut(s) 514, 558, 1200, 1454
BstNSI RCATGY 4 cut(s) 829, 2201, 2362, 2481
BstSCI CCNGG 7 cut(s) 172, 512, 556, 632, 931, 1198, 1452
BstSFI CTRYAG 3 cut(s) 276, 381, 2346
BstV1I GCAGC 4 cut(s) 1191, 1541, 1544, 2387
BstV2I GAAGAC 1 cut(s) 1417
BstX2I RGATCY 3 cut(s) 1498, 1875, 1921
BstXI CCANNNNNNTGG 1 cut(s) 394
BstYI RGATCY 3 cut(s) 1498, 1875, 1921
Bsu15I ATCGAT 1 cut(s) 287
BsuI GTATCC 2 cut(s) 391, 2300
BsuRI GGCC 6 cut(s) 306, 1198, 1239, 1495, 1931, 2335
BsuTUI ATCGAT 1 cut(s) 287
BtrI CACGTC 1 cut(s) 2473
BtsCI GGATG 5 cut(s) 522, 912, 913, 1190, 1911
BtsI GCAGTG 2 cut(s) 285, 1632
BtsIMutI CAGTG 3 cut(s) 285, 875, 1632
Cac8I GCNNGC 5 cut(s) 77, 1237, 1335, 1601, 1933
CfoI GCGC 1 cut(s) 157
Cfr10I RCCGGY 1 cut(s) 2331
Cfr13I GGNCC 3 cut(s) 510, 792, 875
ClaI ATCGAT 1 cut(s) 287
CpoI CGGWCCG 2 cut(s) 792, 875
CseI GACGC 4 cut(s) 98, 1851, 1958, 2381
Csp6I GTAC 6 cut(s) 208, 812, 829, 973, 1404, 2481
CspI CGGWCCG 2 cut(s) 792, 875
CviQI GTAC 6 cut(s) 208, 812, 829, 973, 1404, 2481
DdeI CTNAG 4 cut(s) 1083, 1273, 1304, 2282
DrdI GACNNNNNNGTC 2 cut(s) 131, 873
DriI GACNNNNNGTC 1 cut(s) 739
DseDI GACNNNNNNGTC 2 cut(s) 131, 873
EaeI YGGCCR 3 cut(s) 1196, 1237, 2333
Eam1104I CTCTTC 3 cut(s) 50, 370, 1388
Eam1105I GACNNNNNGTC 1 cut(s) 739
EarI CTCTTC 3 cut(s) 50, 370, 1388
Ecl136II GAGCTC 1 cut(s) 629
Eco130I CCWWGG 4 cut(s) 619, 1654, 2229, 2267
Eco147I AGGCCT 1 cut(s) 306
Eco24I GRGCYC 2 cut(s) 600, 631
Eco47I GGWCC 3 cut(s) 510, 792, 875
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 151, 1683
Eco88I CYCGRG 1 cut(s) 1162
EcoICRI GAGCTC 1 cut(s) 629
EcoRI GAATTC 2 cut(s) 1645, 1667
EcoRII CCWGG 4 cut(s) 512, 556, 1198, 1452
EcoT14I CCWWGG 4 cut(s) 619, 1654, 2229, 2267
EcoT22I ATGCAT 1 cut(s) 2071
EcoT38I GRGCYC 2 cut(s) 600, 631
ErhI CCWWGG 4 cut(s) 619, 1654, 2229, 2267
Esp3I CGTCTC 2 cut(s) 111, 1834
FaqI GGGAC 1 cut(s) 529
FauI CCCGC 1 cut(s) 609
FauNDI CATATG 1 cut(s) 2044
Fnu4HI GCNGC 4 cut(s) 1180, 1530, 1533, 2376
FokI GGATG 5 cut(s) 529, 899, 920, 1197, 1898
FriOI GRGCYC 2 cut(s) 600, 631
Fsp4HI GCNGC 4 cut(s) 1180, 1530, 1533, 2376
GlaI GCGC 1 cut(s) 156
GluI GCNGC 4 cut(s) 1180, 1530, 1533, 2376
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 1 cut(s) 2160
HaeIII GGCC 6 cut(s) 306, 1198, 1239, 1495, 1931, 2335
HapII CCGG 6 cut(s) 174, 634, 842, 933, 1073, 2332
HgaI GACGC 4 cut(s) 98, 1851, 1958, 2381
HhaI GCGC 1 cut(s) 157
Hin1I GRCGYC 1 cut(s) 90
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HincII GTYRAC 1 cut(s) 744
HindII GTYRAC 1 cut(s) 744
HindIII AAGCTT 2 cut(s) 389, 1562
HpaII CCGG 6 cut(s) 174, 634, 842, 933, 1073, 2332
HphI GGTGA 6 cut(s) 308, 360, 697, 2049, 2267, 2379
Hpy166II GTNNAC 1 cut(s) 744
Hpy188I TCNGA 7 cut(s) 116, 642, 653, 879, 1171, 1721, 2098
Hpy188III TCNNGA 8 cut(s) 28, 731, 777, 1742, 1892, 1899, 2177, 2281
Hpy8I GTNNAC 1 cut(s) 744
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 6 cut(s) 59, 488, 1034, 1108, 1306, 2394
HpyCH4III ACNGT 8 cut(s) 21, 232, 510, 572, 792, 870, 890, 1327
HpyCH4IV ACGT 4 cut(s) 126, 354, 1060, 2472
HpyF10VI GCNNNNNNNGC 1 cut(s) 1283
HpyF3I CTNAG 4 cut(s) 1083, 1273, 1304, 2282
HpySE526I ACGT 4 cut(s) 126, 354, 1060, 2472
Hsp92I GRCGYC 1 cut(s) 90
HspAI GCGC 1 cut(s) 155
LmnI GCTCC 5 cut(s) 603, 626, 634, 844, 2453
Lsp1109I GCAGC 4 cut(s) 1191, 1541, 1544, 2387
LweI GCATC 5 cut(s) 898, 995, 1222, 1252, 1346
MaeII ACGT 4 cut(s) 126, 354, 1060, 2472
MfeI CAATTG 2 cut(s) 1266, 2325
MflI RGATCY 3 cut(s) 1498, 1875, 1921
MhlI GDGCHC 3 cut(s) 600, 631, 1353
MlsI TGGCCA 2 cut(s) 1198, 1239
MluNI TGGCCA 2 cut(s) 1198, 1239
MlyI GAGTC 4 cut(s) 320, 637, 749, 2174
MmeI TCCRAC 5 cut(s) 92, 178, 1726, 1839, 2017
Mox20I TGGCCA 2 cut(s) 1198, 1239
Mph1103I ATGCAT 1 cut(s) 2071
MscI TGGCCA 2 cut(s) 1198, 1239
MseI TTAA 6 cut(s) 264, 440, 749, 1001, 1904, 2355
MslI CAYNNNNRTG 3 cut(s) 192, 321, 621
Msp20I TGGCCA 2 cut(s) 1198, 1239
MspA1I CMGCKG 1 cut(s) 1182
MspCI CTTAAG 1 cut(s) 1000
MspI CCGG 6 cut(s) 174, 634, 842, 933, 1073, 2332
MspR9I CCNGG 7 cut(s) 174, 514, 558, 634, 933, 1200, 1454
MunI CAATTG 2 cut(s) 1266, 2325
MvaI CCWGG 4 cut(s) 514, 558, 1200, 1454
MwoI GCNNNNNNNGC 1 cut(s) 1283
NciI CCSGG 3 cut(s) 174, 634, 933
NdeI CATATG 1 cut(s) 2044
NlaIV GGNNCC 2 cut(s) 599, 1712
NmuCI GTSAC 5 cut(s) 948, 1189, 1321, 2055, 2473
NsiI ATGCAT 1 cut(s) 2071
NspI RCATGY 4 cut(s) 829, 2201, 2362, 2481
OliI CACNNNNGTG 1 cut(s) 621
PaeR7I CTCGAG 1 cut(s) 1162
PceI AGGCCT 1 cut(s) 306
PciI ACATGT 4 cut(s) 825, 2197, 2358, 2477
PfoI TCCNGGA 1 cut(s) 512
PkrI GCNGC 4 cut(s) 1181, 1531, 1534, 2377
PleI GAGTC 4 cut(s) 320, 637, 748, 2174
PpsI GAGTC 4 cut(s) 320, 637, 748, 2174
PscI ACATGT 4 cut(s) 825, 2197, 2358, 2477
Psp124BI GAGCTC 1 cut(s) 631
Psp1406I AACGTT 1 cut(s) 354
Psp6I CCWGG 4 cut(s) 512, 556, 1198, 1452
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 4 cut(s) 512, 556, 1198, 1452
PspN4I GGNNCC 2 cut(s) 599, 1712
PspPI GGNCC 3 cut(s) 510, 792, 875
PspXI VCTCGAGB 1 cut(s) 1162
PstI CTGCAG 2 cut(s) 280, 2350
PsuI RGATCY 3 cut(s) 1498, 1875, 1921
RsaI GTAC 6 cut(s) 209, 813, 830, 974, 1405, 2482
RsaNI GTAC 6 cut(s) 208, 812, 829, 973, 1404, 2481
RseI CAYNNNNRTG 3 cut(s) 192, 321, 621
Rsr2I CGGWCCG 2 cut(s) 792, 875
RsrII CGGWCCG 2 cut(s) 792, 875
SacI GAGCTC 1 cut(s) 631
SaqAI TTAA 6 cut(s) 264, 440, 749, 1001, 1904, 2355
SatI GCNGC 4 cut(s) 1180, 1530, 1533, 2376
Sau96I GGNCC 3 cut(s) 510, 792, 875
SchI GAGTC 4 cut(s) 320, 637, 749, 2174
ScrFI CCNGG 7 cut(s) 174, 514, 558, 634, 933, 1200, 1454
SduI GDGCHC 3 cut(s) 600, 631, 1353
SfaNI GCATC 5 cut(s) 898, 995, 1222, 1252, 1346
SfcI CTRYAG 3 cut(s) 276, 381, 2346
Sfr274I CTCGAG 1 cut(s) 1162
SinI GGWCC 3 cut(s) 510, 792, 875
SlaI CTCGAG 1 cut(s) 1162
SmiMI CAYNNNNRTG 3 cut(s) 192, 321, 621
SmlI CTYRAG 4 cut(s) 328, 419, 1000, 1162
SmoI CTYRAG 4 cut(s) 328, 419, 1000, 1162
SpeI ACTAGT 2 cut(s) 607, 2426
SseBI AGGCCT 1 cut(s) 306
SsiI CCGC 6 cut(s) 190, 602, 795, 873, 1182, 1973
SspI AATATT 3 cut(s) 472, 1939, 1995
SstI GAGCTC 1 cut(s) 631
StuI AGGCCT 1 cut(s) 306
StyD4I CCNGG 7 cut(s) 172, 512, 556, 632, 931, 1198, 1452
StyI CCWWGG 4 cut(s) 619, 1654, 2229, 2267
TaaI ACNGT 8 cut(s) 21, 232, 510, 572, 792, 870, 890, 1327
TaiI ACGT 4 cut(s) 129, 357, 1063, 2475
TaqI TCGA 8 cut(s) 15, 287, 456, 808, 1163, 1295, 2193, 2497
TatI WGTACW 3 cut(s) 811, 828, 2480
Tru1I TTAA 6 cut(s) 264, 440, 749, 1001, 1904, 2355
Tru9I TTAA 6 cut(s) 264, 440, 749, 1001, 1904, 2355
TscAI CASTG 3 cut(s) 285, 875, 1632
TseFI GTSAC 5 cut(s) 948, 1189, 1321, 2055, 2473
TseI GCWGC 4 cut(s) 1179, 1529, 1532, 2375
Tsp45I GTSAC 5 cut(s) 948, 1189, 1321, 2055, 2473
TspGWI ACGGA 2 cut(s) 333, 706
TspRI CASTG 3 cut(s) 285, 875, 1632
Vha464I CTTAAG 1 cut(s) 1000
VpaK11BI GGWCC 3 cut(s) 510, 792, 875
XapI RAATTY 7 cut(s) 178, 1108, 1421, 1645, 1667, 1722, 2185
XceI RCATGY 4 cut(s) 829, 2201, 2362, 2481
XhoI CTCGAG 1 cut(s) 1162
XmaJI CCTAGG 1 cut(s) 2267
Zsp2I ATGCAT 1 cut(s) 2071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.