RLG00000031280

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
3659995 .. 3663640
3646 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031280

Sequence Viewer

Length: 2097 bp
ATGAAGCTCTTGGTTATGGAAATGGACCTCCAGATTACGATCAACATGGGTATTGGTGCTTCGGTAGATAGCGTAACAAGTGTACAACCTGTGAGGGATGGTGAATTTCTGGTCTCTAAGGGAGAAGTGTTTGAGCTGGGGTTCTTCAGCCCCGGAAAATCCACTTATCGCTATGTTGGAATTTGGTACAAGAAAGATATGAAGAAAACGGTTGTATGGGTTGCAAACAGAGATAATCCTATAAATGATACCTCCGGAGTCCTGACAATTAGTGCTGATCATGGAAACCTCGTCCTCTATGCCAAGAACCAAAGCAATGTACATCTCTGGTCCACCAACTCCAATGCTTCAACACATGCTGATCCTAAAGCTCAGCTCTTAGACACTGGAAACCTTGTTTTGATTGACAAGGAGAGCCAAAAGGTAACATGGCAAAGCTTTGATTATCCCTCGAATACATTGCTTCCATATATGAAGACAGGAGTGAACAAGCACACGGGATTCAGCTGGTTCCTAACTTCCTGGAAGTCGGAAGATGACCCAGGAACGGGGAATTGCACCTTTGTGATGGACGAAAGTGGAGCTCCTCAAATGATCTTGTACAAAGGTGATGTTCGATGGTGGCGAACTGGCAATTGGAAAGGCATTAGGTGGTCGTGGAATAACACACCAGTAGTGCTGAGTGCTCCTTTCATTTTCAATGCCAGCTACGTGAACAATCAGGATGAGATCAGTAGTACATGGGGTCATCTTAACTCCTCTATCTCCTCAATAATGGTAATAGATGACTCCGGATCAATCCAACAGCTTACGTGGTTTGAAGAAAACCTTGGATGGAAAGAAATGTGGTCTGCGCCGATAGACAAATGTGACTATTACGGCAAGTGTGGAGAATTTGGTTACTGTGACTCTTCCAGTCTTAGCCTGTTTGAGTGCCAATGCCTTCCTGGATTTGAACCCAAGTCACCAGATGAATGGGACATGAGAGATGCATCGGATGGTTGTATGAGGAAACGCATGGCATGCCACAATGGAGAAGGTTTTGTGAAGAAGGAAAAGGTGAAAGTTCCTGATATGTCAGTAGCAACCATGGATATGAACTTAAGTTGGAAAGAATGTGAGCAGGAGTGCTTCAGGAACTGCTCTTGCTCTGCATATGCAATTCATGGAACCAAAGAAAATGTGAAGGGATGCATGAGATGGTACGGGAATTTAGTAGATACGACCAATTTTGCTGAAGGGGGTCAAGATTTATACGTACGCGTAGATGCAATTGATTTAGCTGAATACACCAAGAAGTCCAGGGATTTTCTTGCCAAAAAGGGGATGCTCTTGATTTTAGTAGTGTCCATTGCTCTGATACTCCTCTTTGTTTTCTTTGGATGTTGGTATTCAAAGAGGAAGAGAAAATACCATCAGATGGAGGGAAAGCATGATAGCAGTACAACTCATCATGACCTGCCTTTTTTTGAGCTGAAAAGCTTAGGTCTACTAGCTACTGGACAAGAGGTCGCTGTGAAAAGATTGTCAAAGAATTCTGGTCAAGGTTTAGAACAATTTAAGAATGAAGTTATGTTGATTGCAAAACTTCAGCACCGGAACCTGGTGAGGCTTTTCGGTTACTGCATCCATGCAGAAGAGAAGATTGGCTATATGTCACCTGAATATGCAATGGAAGGGCGATATTCAACAAAATCTGATGTTTTCAGTTATGGTGTCTTACTGCTAGAGATCATTAGTGGCAAAAGAGCCACTGTTTACGATACTCAAGGTCCCTCCCCAAGTTTAATTGGACAGATTTGGGATATGTGGACAGAGAATACAGCATTAAGTATTGTTGATCCATCTCTGGGTCAGTCCTATCCTGCTCATGAGGTCTCAAGATGCATCCAGATTGGGCTGTTGTGTGTGCAAGAATCTGCATCAGATCGGCCATCCATGTCGGCAGTTGTCTCCGTGTTGGGTAACGAAACACCTCTTCATTCTCCTAAGAAACCTGCATTCATATTACAGTCTAGCAATCCAAACTCAGCAGCATCAAGAGGAGCCCCTGCTTCGCTAAATGATCTAACCATAACTATGCCAGAAGCACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

699

Amino Acids

78.28

Weight (kDa)

6.06

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 70 - 176 1.6e-36 D-mannose binding lectin
S_locus_glycop PF00954 208 - 322 9.9e-24 S-locus glycoprotein domain
PAN_2 PF08276 342 - 408 2.1e-16 PAN-like domain
PK_Tyr_Ser-Thr PF07714 547 - 654 7.3e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1467, 2005
AccB7I CCANNNNNTGG 1 cut(s) 1420
AccI GTMKAC 1 cut(s) 1489
AccII CGCG 1 cut(s) 1263
AccIII TCCGGA 2 cut(s) 254, 791
AclWI GGATC 3 cut(s) 356, 802, 1835
AcoI YGGCCR 1 cut(s) 1931
AcsI RAATTY 5 cut(s) 104, 180, 893, 1210, 1534
AcuI CTGAAG 4 cut(s) 130, 1117, 1257, 1574
AfaI GTAC 8 cut(s) 84, 188, 321, 602, 739, 1205, 1260, 1444
AfiI CCNNNNNNNGG 6 cut(s) 547, 548, 1323, 1420, 1603, 1850
AflII CTTAAG 1 cut(s) 1102
AflIII ACRYGT 1 cut(s) 1261
AgsI TTSAA 6 cut(s) 351, 700, 821, 956, 1395, 1689
AhdI GACNNNNNGTC 1 cut(s) 1508
AjnI CCWGG 5 cut(s) 521, 541, 946, 1301, 1602
AjuI GAANNNNNNNTTGG 6 cut(s) 619, 651, 813, 845, 1629, 1661
AleI CACNNNNGTG 1 cut(s) 563
Alw21I GWGCWC 2 cut(s) 586, 688
Alw26I GTCTC 3 cut(s) 118, 1882, 1957
AlwI GGATC 3 cut(s) 356, 802, 1835
AlwNI CAGNNNCTG 1 cut(s) 1140
Aor13HI TCCGGA 2 cut(s) 254, 791
AoxI GGCC 1 cut(s) 1931
ApeKI GCWGC 1 cut(s) 2033
ApoI RAATTY 5 cut(s) 104, 180, 893, 1210, 1534
AspLEI GCGC 1 cut(s) 856
AspS9I GGNCC 3 cut(s) 25, 330, 1772
AsuC2I CCSGG 1 cut(s) 153
AsuHPI GGTGA 6 cut(s) 113, 620, 957, 1072, 1618, 1650
AvaII GGWCC 3 cut(s) 25, 330, 1772
BanII GRGCYC 2 cut(s) 586, 2050
BarI GAAGNNNNNNTAC 4 cut(s) 43, 75, 1394, 1426
BbsI GAAGAC 1 cut(s) 482
Bbv12I GWGCWC 2 cut(s) 586, 688
BbvI GCAGC 1 cut(s) 2045
BceAI ACGGC 1 cut(s) 895
BcgI CGANNNNNNTGC 2 cut(s) 442, 476
BciT130I CCWGG 5 cut(s) 523, 543, 948, 1303, 1604
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 1 cut(s) 153
BcoDI GTCTC 3 cut(s) 118, 1882, 1957
BfaI CTAG 3 cut(s) 1493, 1727, 2016
BfrI CTTAAG 1 cut(s) 1102
BfuAI ACCTGC 2 cut(s) 1467, 2005
BisI GCNGC 1 cut(s) 2034
BlpI GCTNAGC 1 cut(s) 372
BlsI GCNGC 1 cut(s) 2035
Bme1390I CCNGG 6 cut(s) 153, 523, 543, 948, 1303, 1604
Bme18I GGWCC 3 cut(s) 25, 330, 1772
BmeRI GACNNNNNGTC 1 cut(s) 1508
BmgT120I GGNCC 3 cut(s) 25, 330, 1772
BmiI GGNNCC 5 cut(s) 512, 1171, 1601, 1774, 2047
BmrFI CCNGG 6 cut(s) 153, 523, 543, 948, 1303, 1604
BpiI GAAGAC 1 cut(s) 482
BpmI CTGGAG 1 cut(s) 14
Bpu10I CCTNAGC 1 cut(s) 1483
Bpu1102I GCTNAGC 1 cut(s) 372
BpuEI CTTGAG 2 cut(s) 1752, 1864
BpuMI CCSGG 1 cut(s) 153
BsaAI YACGTR 3 cut(s) 712, 813, 1258
BsaBI GATNNNNATC 1 cut(s) 38
BsaI GGTCTC 2 cut(s) 118, 1882
BsaJI CCNNGG 5 cut(s) 151, 541, 829, 1089, 1302
BsaWI WCCGGW 3 cut(s) 254, 791, 1596
Bsc4I CCNNNNNNNGG 6 cut(s) 547, 548, 1323, 1420, 1603, 1850
Bse1I ACTGG 5 cut(s) 391, 634, 671, 915, 1504
Bse3DI GCAATG 4 cut(s) 322, 458, 1350, 1677
Bse8I GATNNNNATC 1 cut(s) 38
BseAI TCCGGA 2 cut(s) 254, 791
BseBI CCWGG 5 cut(s) 523, 543, 948, 1303, 1604
BseDI CCNNGG 5 cut(s) 151, 541, 829, 1089, 1302
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 6 cut(s) 547, 548, 1323, 1420, 1603, 1850
BseMI GCAATG 4 cut(s) 322, 458, 1350, 1677
BseMII CTCAG 3 cut(s) 386, 671, 2043
BseNI ACTGG 5 cut(s) 391, 634, 671, 915, 1504
BseRI GAGGAG 5 cut(s) 576, 748, 757, 1355, 2058
BseXI GCAGC 1 cut(s) 2045
BseYI CCCAGC 1 cut(s) 136
Bsh1236I CGCG 1 cut(s) 1263
BshFI GGCC 1 cut(s) 1933
BsiHKAI GWGCWC 2 cut(s) 586, 688
BsiSI CCGG 4 cut(s) 153, 255, 792, 1597
BsiWI CGTACG 1 cut(s) 1258
BslFI GGGAC 2 cut(s) 992, 1758
BslI CCNNNNNNNGG 6 cut(s) 547, 548, 1323, 1420, 1603, 1850
BsmAI GTCTC 3 cut(s) 118, 1882, 1957
BsmFI GGGAC 2 cut(s) 992, 1758
BsmI GAATGC 1 cut(s) 2000
BsnI GGCC 1 cut(s) 1933
Bso31I GGTCTC 2 cut(s) 118, 1882
Bsp1286I GDGCHC 3 cut(s) 586, 688, 2050
Bsp13I TCCGGA 2 cut(s) 254, 791
Bsp1407I TGTACA 3 cut(s) 82, 319, 600
Bsp1720I GCTNAGC 1 cut(s) 372
Bsp19I CCATGG 1 cut(s) 1089
BspANI GGCC 1 cut(s) 1933
BspCNI CTCAG 3 cut(s) 385, 672, 2042
BspEI TCCGGA 2 cut(s) 254, 791
BspFNI CGCG 1 cut(s) 1263
BspHI TCATGA 2 cut(s) 1453, 1870
BspLI GGNNCC 5 cut(s) 512, 1171, 1601, 1774, 2047
BspMI ACCTGC 2 cut(s) 1467, 2005
BspPI GGATC 3 cut(s) 356, 802, 1835
BspTI CTTAAG 1 cut(s) 1102
BspTNI GGTCTC 2 cut(s) 118, 1882
BsrDI GCAATG 4 cut(s) 322, 458, 1350, 1677
BsrGI TGTACA 3 cut(s) 82, 319, 600
BsrI ACTGG 5 cut(s) 391, 634, 671, 915, 1504
BssECI CCNNGG 5 cut(s) 151, 541, 829, 1089, 1302
BssT1I CCWWGG 2 cut(s) 829, 1089
Bst2UI CCWGG 5 cut(s) 523, 543, 948, 1303, 1604
Bst4CI ACNGT 4 cut(s) 211, 905, 1756, 2013
Bst6I CTCTTC 4 cut(s) 916, 1397, 1632, 1983
BstAFI CTTAAG 1 cut(s) 1102
BstAPI GCANNNNNTGC 1 cut(s) 1023
BstAUI TGTACA 3 cut(s) 82, 319, 600
BstBAI YACGTR 3 cut(s) 712, 813, 1258
BstC8I GCNNGC 3 cut(s) 706, 1024, 2092
BstDEI CTNAG 8 cut(s) 117, 372, 379, 680, 920, 1483, 1989, 2029
BstDSI CCRYGG 1 cut(s) 1089
BstFNI CGCG 1 cut(s) 1263
BstHHI GCGC 1 cut(s) 856
BstMAI GTCTC 3 cut(s) 118, 1882, 1957
BstMWI GCNNNNNNNGC 1 cut(s) 1023
BstNI CCWGG 5 cut(s) 523, 543, 948, 1303, 1604
BstNSI RCATGY 2 cut(s) 359, 1026
BstSCI CCNGG 6 cut(s) 151, 521, 541, 946, 1301, 1602
BstSNI TACGTA 1 cut(s) 1258
BstUI CGCG 1 cut(s) 1263
BstV1I GCAGC 1 cut(s) 2045
BstV2I GAAGAC 1 cut(s) 482
BstXI CCANNNNNNTGG 1 cut(s) 975
BsuRI GGCC 1 cut(s) 1933
BtgI CCRYGG 1 cut(s) 1089
BtsIMutI CAGTG 2 cut(s) 384, 1752
BveI ACCTGC 2 cut(s) 1467, 2005
Cac8I GCNNGC 3 cut(s) 706, 1024, 2092
CaiI CAGNNNCTG 1 cut(s) 1140
CciI TCATGA 2 cut(s) 1453, 1870
CfoI GCGC 1 cut(s) 856
Cfr13I GGNCC 3 cut(s) 25, 330, 1772
CsiI ACCWGGT 1 cut(s) 1602
Csp6I GTAC 8 cut(s) 83, 187, 320, 601, 738, 1204, 1259, 1443
CviQI GTAC 8 cut(s) 83, 187, 320, 601, 738, 1204, 1259, 1443
DdeI CTNAG 8 cut(s) 117, 372, 379, 680, 920, 1483, 1989, 2029
DriI GACNNNNNGTC 1 cut(s) 1508
EaeI YGGCCR 1 cut(s) 1931
Eam1104I CTCTTC 4 cut(s) 916, 1397, 1632, 1983
Eam1105I GACNNNNNGTC 1 cut(s) 1508
EarI CTCTTC 4 cut(s) 916, 1397, 1632, 1983
Ecl136II GAGCTC 1 cut(s) 584
Eco105I TACGTA 1 cut(s) 1258
Eco130I CCWWGG 2 cut(s) 829, 1089
Eco24I GRGCYC 2 cut(s) 586, 2050
Eco31I GGTCTC 2 cut(s) 118, 1882
Eco47I GGWCC 3 cut(s) 25, 330, 1772
Eco53kI GAGCTC 1 cut(s) 584
Eco57I CTGAAG 4 cut(s) 130, 1117, 1257, 1574
EcoICRI GAGCTC 1 cut(s) 584
EcoO109I RGGNCCY 1 cut(s) 1772
EcoRI GAATTC 1 cut(s) 1534
EcoRII CCWGG 5 cut(s) 521, 541, 946, 1301, 1602
EcoT14I CCWWGG 2 cut(s) 829, 1089
EcoT22I ATGCAT 3 cut(s) 994, 1196, 1889
EcoT38I GRGCYC 2 cut(s) 586, 2050
ErhI CCWWGG 2 cut(s) 829, 1089
FalI AAGNNNNNCTT 2 cut(s) 813, 845
FaqI GGGAC 2 cut(s) 992, 1758
FauNDI CATATG 1 cut(s) 1156
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 1 cut(s) 1489
Fnu4HI GCNGC 1 cut(s) 2034
FriOI GRGCYC 2 cut(s) 586, 2050
Fsp4HI GCNGC 1 cut(s) 2034
FspBI CTAG 3 cut(s) 1493, 1727, 2016
GlaI GCGC 1 cut(s) 855
GluI GCNGC 1 cut(s) 2034
GsaI CCCAGC 1 cut(s) 140
GsuI CTGGAG 1 cut(s) 14
HaeIII GGCC 1 cut(s) 1933
HapII CCGG 4 cut(s) 153, 255, 792, 1597
HhaI GCGC 1 cut(s) 856
Hin6I GCGC 1 cut(s) 854
HinP1I GCGC 1 cut(s) 854
HindIII AAGCTT 2 cut(s) 436, 1480
HinfI GANTC 5 cut(s) 258, 501, 788, 908, 1916
HpaII CCGG 4 cut(s) 153, 255, 792, 1597
HphI GGTGA 6 cut(s) 113, 620, 957, 1072, 1618, 1650
Hpy166II GTNNAC 7 cut(s) 83, 333, 487, 715, 1490, 1759, 1812
Hpy188I TCNGA 6 cut(s) 532, 997, 1359, 1419, 1699, 1927
Hpy8I GTNNAC 7 cut(s) 83, 333, 487, 715, 1490, 1759, 1812
HpyAV CCTTC 6 cut(s) 953, 1031, 1045, 1180, 1232, 1670
HpyCH4III ACNGT 4 cut(s) 211, 905, 1756, 2013
HpyCH4IV ACGT 3 cut(s) 711, 812, 1257
HpyF10VI GCNNNNNNNGC 1 cut(s) 1023
HpyF3I CTNAG 8 cut(s) 117, 372, 379, 680, 920, 1483, 1989, 2029
HpySE526I ACGT 3 cut(s) 711, 812, 1257
HspAI GCGC 1 cut(s) 854
Kpn2I TCCGGA 2 cut(s) 254, 791
Ksp22I TGATCA 1 cut(s) 277
LmnI GCTCC 4 cut(s) 581, 589, 691, 2045
Lsp1109I GCAGC 1 cut(s) 2045
MabI ACCWGGT 1 cut(s) 1602
MaeI CTAG 3 cut(s) 1493, 1727, 2016
MaeII ACGT 3 cut(s) 711, 812, 1257
MaeIII GTNAC 9 cut(s) 73, 424, 869, 899, 905, 963, 1619, 1656, 1964
MfeI CAATTG 2 cut(s) 634, 1272
MhlI GDGCHC 3 cut(s) 586, 688, 2050
MluI ACGCGT 1 cut(s) 1261
MlyI GAGTC 3 cut(s) 267, 782, 902
MmeI TCCRAC 4 cut(s) 157, 510, 826, 1088
Mph1103I ATGCAT 3 cut(s) 994, 1196, 1889
MroI TCCGGA 2 cut(s) 254, 791
MseI TTAA 5 cut(s) 753, 1103, 1560, 1787, 1829
MslI CAYNNNNRTG 3 cut(s) 563, 1094, 2078
MspA1I CMGCKG 1 cut(s) 507
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 4 cut(s) 153, 255, 792, 1597
MspR9I CCNGG 6 cut(s) 153, 523, 543, 948, 1303, 1604
MunI CAATTG 2 cut(s) 634, 1272
Mva1269I GAATGC 1 cut(s) 2000
MvaI CCWGG 5 cut(s) 523, 543, 948, 1303, 1604
MvnI CGCG 1 cut(s) 1263
MwoI GCNNNNNNNGC 1 cut(s) 1023
NciI CCSGG 1 cut(s) 153
NcoI CCATGG 1 cut(s) 1089
NdeI CATATG 1 cut(s) 1156
NlaIV GGNNCC 5 cut(s) 512, 1171, 1601, 1774, 2047
NmuCI GTSAC 4 cut(s) 869, 905, 963, 1656
NsiI ATGCAT 3 cut(s) 994, 1196, 1889
NspI RCATGY 2 cut(s) 359, 1026
OliI CACNNNNGTG 1 cut(s) 563
PaeI GCATGC 1 cut(s) 1026
PagI TCATGA 2 cut(s) 1453, 1870
PcsI WCGNNNNNNNCGW 1 cut(s) 622
PctI GAATGC 1 cut(s) 2000
PfeI GAWTC 2 cut(s) 501, 1916
Pfl23II CGTACG 1 cut(s) 1258
PflMI CCANNNNNTGG 1 cut(s) 1420
PfoI TCCNGGA 2 cut(s) 521, 946
PkrI GCNGC 1 cut(s) 2035
PleI GAGTC 3 cut(s) 266, 782, 902
PpsI GAGTC 3 cut(s) 266, 782, 902
Ppu21I YACGTR 3 cut(s) 712, 813, 1258
PpuMI RGGWCCY 1 cut(s) 1772
Psp124BI GAGCTC 1 cut(s) 586
Psp5II RGGWCCY 1 cut(s) 1772
Psp6I CCWGG 5 cut(s) 521, 541, 946, 1301, 1602
PspFI CCCAGC 1 cut(s) 136
PspGI CCWGG 5 cut(s) 521, 541, 946, 1301, 1602
PspLI CGTACG 1 cut(s) 1258
PspN4I GGNNCC 5 cut(s) 512, 1171, 1601, 1774, 2047
PspPI GGNCC 3 cut(s) 25, 330, 1772
PspPPI RGGWCCY 1 cut(s) 1772
PstNI CAGNNNCTG 1 cut(s) 1140
PvuII CAGCTG 1 cut(s) 507
RsaI GTAC 8 cut(s) 84, 188, 321, 602, 739, 1205, 1260, 1444
RsaNI GTAC 8 cut(s) 83, 187, 320, 601, 738, 1204, 1259, 1443
RseI CAYNNNNRTG 3 cut(s) 563, 1094, 2078
SacI GAGCTC 1 cut(s) 586
SaqAI TTAA 5 cut(s) 753, 1103, 1560, 1787, 1829
SatI GCNGC 1 cut(s) 2034
Sau96I GGNCC 3 cut(s) 25, 330, 1772
SchI GAGTC 3 cut(s) 267, 782, 902
ScrFI CCNGG 6 cut(s) 153, 523, 543, 948, 1303, 1604
SduI GDGCHC 3 cut(s) 586, 688, 2050
SexAI ACCWGGT 1 cut(s) 1602
SinI GGWCC 3 cut(s) 25, 330, 1772
SmiMI CAYNNNNRTG 3 cut(s) 563, 1094, 2078
SmlI CTYRAG 3 cut(s) 1102, 1767, 1879
SmoI CTYRAG 3 cut(s) 1102, 1767, 1879
SnaBI TACGTA 1 cut(s) 1258
SphI GCATGC 1 cut(s) 1026
SspMI CTAG 3 cut(s) 1493, 1727, 2016
SstI GAGCTC 1 cut(s) 586
StyD4I CCNGG 6 cut(s) 151, 521, 541, 946, 1301, 1602
StyI CCWWGG 2 cut(s) 829, 1089
TaaI ACNGT 4 cut(s) 211, 905, 1756, 2013
TaiI ACGT 3 cut(s) 714, 815, 1260
TaqI TCGA 2 cut(s) 452, 616
TatI WGTACW 5 cut(s) 82, 319, 600, 737, 1442
TfiI GAWTC 2 cut(s) 501, 1916
Tru1I TTAA 5 cut(s) 753, 1103, 1560, 1787, 1829
Tru9I TTAA 5 cut(s) 753, 1103, 1560, 1787, 1829
TscAI CASTG 2 cut(s) 391, 1759
TseFI GTSAC 4 cut(s) 869, 905, 963, 1656
TseI GCWGC 1 cut(s) 2033
Tsp45I GTSAC 4 cut(s) 869, 905, 963, 1656
TspGWI ACGGA 1 cut(s) 1945
TspRI CASTG 2 cut(s) 391, 1759
Van91I CCANNNNNTGG 1 cut(s) 1420
Vha464I CTTAAG 1 cut(s) 1102
VpaK11BI GGWCC 3 cut(s) 25, 330, 1772
XapI RAATTY 5 cut(s) 104, 180, 893, 1210, 1534
XceI RCATGY 2 cut(s) 359, 1026
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 1489
XspI CTAG 3 cut(s) 1493, 1727, 2016
Zsp2I ATGCAT 3 cut(s) 994, 1196, 1889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.