MD05G1334000.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45720563 .. 45723815
3253 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1334000.v1.1.491

Sequence Viewer

Length: 2526 bp
ATGGATTTTGTGAAAGGTCTGCTGAATGTTTTAGTTCTTCAGCTTCTCCTTCTCCAGCTCTGCTCTTCCTTGGACACCATAAAATTTGATCAACGCATCCGAGAAGGTGATTTCTTGGAGTCCAAGAATAAGACCTTTGTCCTGGGATTCTTTAGGCCCAAAATGTCAAACAACAGCTATGTCGGAATTTGGTACAAGTTCTCGGAAGGCATGGTTGTGTGGGTAGCCAACAGAGATAATCCAATCAATGGCAGCTCAGGAGTTCTTTCAATAGGTTCTGATGGAAACCTAGCGCTGCAAGCCGATACTAGCGAAGGCCTTATTCCTCTGTGGTCAACAAATGTTTCGATATCATCAGCAAGCAACGATAATATTTTTGCGCAAATTCTTGATTCAGGAAACCTTGTTTTGGCTCAACAAGGCAGCCGGCATGTTTTTTGGCAGAGCACTGATCACCCTACAAATATTCTTCTTCCGAATACAAAAATGGGGTTGGACAGAAGAAGTGGCATAAACCGGTTCCTCACGAGTTGGAACTCGGAAAATGATCCTGGGACAGGGAATGTTTCATTGAGAATTGACCCGTATGGATCGCCTCAGTTGATCTTGTACAAGAATGAGGCTAAATTGTGGAGGTCAGGACAGTGGAACGGGATTCAATGGAGTGGGATACCTGACGTGCCGAAGGATGTGTTTAAGATCAATTTTGTAAACAACAAAGATGAAATTACTTCGCAGTGGACTGATCTCGACCCTTCAATTTACTCAGTGTACACAGTAGACTATTCGGGAACACTCAACCTCCGAGCATGGCAGAGGCAGCAGCACCAGTGGGTTGTGCTTTGGTCGTCGCAATCTTATGATCACTGTAACAGCTATGGCAAGTGTGGTAAATTTGGCAATTGCAATCATACTGAAAGTGGATTCAACTGCACATGCTACCCCGGATATGAACCAATATCACCGCAGGATTGGGATTCGAAAGATGGGAGAGGTGGGTGCAAGAGGCAGCAGGGTTCGCGGTCCATGTGCAGGAGTGGCGAGGGGTTTGTGAAGATGAAAAATGTAGAGGTTCCAGACACTTCCTCCATAAAATTGGAGAAGAATTTGAGCTTGGAAGCGTGCGAGGAGGAGTGCTTGAAGAACTGCACGTGCTTGGCGTACGCGATTGAAGATGTGACGAATGGAGGGACTGGATGCATGACATGGTATAGAGATTTGATGGATACTAAGCAGTTCACAGTAGGCGGGCAAGATTTGTACGTTCGTGCAGATGCAGTAGTTTTAGCTCAGTATAAAAACAAGTCAGTAGGAGGGTATTTTTCTGGGAAAAGGCGACTGGCTATTATATTGGTAGTGTCAATTTCTGTCGCCTCAATGCTCATCCTCGCAGTTCTATGTTGGTTCAGGAAAAGGAGCGTGAAAGGGAGAGGAGGACAACCCAAATTTCTGAATGATCCCACTACTTCTGGTGTACGAAACTATGAAGATTCGCCAATAAAATATGAGGTTGATGAACACAGAGGAGAAACAGATTTACCTTTTTTCGATTTAACCACCGTGGTTGCAGCCACAGAAAACTTCTCTTCTGCTAACATGCTTGGACATGGAGGCTTCGGCACGGTATATAAGGGATGTCTAGCTGAAGGACAGGAAATAGCTGTTAAAAGATTATCGAGAAATTCAGGACAAGGCATAGACGAATTCAAGAACGAAGTAATGCTTATTGCAAAGCTTCAGCATAGAAATCTTGTGAGGCTTTTGGGTTGCTGCATACATAAAGAAGAGAGGATGCTAATCTACGAATACATGCCGAATCGCAGCTTGGACTTATGCCTTTTCGATAAAAACAGAAAGTCGTTGTTAGATTGGAGAAAAAGATTTCAAATTATCATTGGGATTGCTCGAGGCGTCCTATATCTTCATCAAGATTCGAGACTAAAAATAATCCACAGGGATTTGAAAGCGAGCAATGTTTTACTGGATGGTTCATTGAACCCAAAAATATCAGATTTTGGCATAGCAAGGATGTTCGGGGATGATCAAATTGAAGCAAACACGAATAAAATTGTTGGCACCTACGGTTATATGTCACCAGAGTATGCTATGGATGGGTTATATTCCACAAAATCTGATGTGTTTAGCTTTGGAGTCTTGGCACTAGAGATCATTAGTGGAAGGAAGAACAGCTTCCAATTTGAAAACTCACCTCTGAATTTGGTTGGAATAATATGGGACTTGTGGACAGAAGGAAAAGTCTTGGACATAATTGATTCATCACTGAACCAGTCGTATTCGATTTCTGAAGTTATGAGATACATTCAGATTGGGCTTTTGTGCGTCCAAGAATACCCAACAGATCGGCCAACCATGCTAGATGTTTTGTTCATGTTGGGGAATGAAACGACTCTTCCACATCCGAAAAAGGCAGCGTTTAGCATGAAAAACAGTGGTCCAGATTCTTCAACGTCTAAAGGAGCTTCTTCTGTAAATGATGTAACAGTAACAATTATTGAAGCTCGTTGA

Protein Analysis

842

Amino Acids

94.25

Weight (kDa)

6.86

Isoelectric Point (pI)

41.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 178 8.9e-31 D-mannose binding lectin
S_locus_glycop PF00954 211 - 319 2e-21 S-locus glycoprotein domain
PAN_2 PF08276 344 - 410 1.6e-19 PAN-like domain
Pkinase PF00069 530 - 794 4.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 531 - 794 5.4e-47 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 800 - 841 1.6e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 2075
AccB7I CCANNNNNTGG 1 cut(s) 248
AccI GTMKAC 1 cut(s) 780
AccII CGCG 2 cut(s) 1021, 1166
AciI CCGC 3 cut(s) 965, 1021, 1248
AclWI GGATC 3 cut(s) 542, 598, 1451
AcoI YGGCCR 1 cut(s) 2363
AcsI RAATTY 9 cut(s) 83, 186, 384, 893, 1105, 1445, 1681, 1703, 2215
AcuI CTGAAG 4 cut(s) 23, 1665, 1721, 2325
AcvI CACGTG 1 cut(s) 1152
AcyI GRCGYC 1 cut(s) 1911
AfaI GTAC 6 cut(s) 194, 611, 773, 1163, 1262, 1476
AfeI AGCGCT 1 cut(s) 294
AfiI CCNNNNNNNGG 4 cut(s) 248, 409, 557, 1032
AgeI ACCGGT 1 cut(s) 516
AjiI CACGTC 1 cut(s) 679
AjnI CCWGG 2 cut(s) 141, 550
AjuI GAANNNNNNNTTGG 4 cut(s) 1097, 1129, 1808, 1840
Alw21I GWGCWC 1 cut(s) 449
Alw26I GTCTC 1 cut(s) 1930
AlwI GGATC 3 cut(s) 542, 598, 1451
Ama87I CYCGRG 1 cut(s) 1905
Aor51HI AGCGCT 1 cut(s) 294
AoxI GGCC 3 cut(s) 155, 316, 2363
ApoI RAATTY 9 cut(s) 83, 186, 384, 893, 1105, 1445, 1681, 1703, 2215
AsiGI ACCGGT 1 cut(s) 516
Asp700I GAANNNNTTC 1 cut(s) 2189
AspLEI GCGC 2 cut(s) 295, 382
AspS9I GGNCC 3 cut(s) 156, 1023, 2453
AsuC2I CCSGG 1 cut(s) 945
AsuHPI GGTGA 5 cut(s) 119, 446, 954, 2085, 2199
AsuII TTCGAA 1 cut(s) 980
AvaI CYCGRG 1 cut(s) 1905
AvaII GGWCC 2 cut(s) 1023, 2453
BanI GGYRCC 1 cut(s) 2075
BauI CACGAG 1 cut(s) 526
BbrPI CACGTG 1 cut(s) 1152
Bbv12I GWGCWC 1 cut(s) 449
BccI CCATC 5 cut(s) 275, 980, 1216, 1979, 2105
BciT130I CCWGG 2 cut(s) 143, 552
BciVI GTATCC 2 cut(s) 663, 1219
BclI TGATCA 4 cut(s) 88, 451, 862, 2041
BcnI CCSGG 1 cut(s) 945
BcoDI GTCTC 1 cut(s) 1930
BfaI CTAG 5 cut(s) 290, 309, 1640, 2162, 2375
BfoI RGCGCY 1 cut(s) 296
BfuI GTATCC 2 cut(s) 663, 1219
Bme1390I CCNGG 3 cut(s) 143, 552, 945
Bme18I GGWCC 2 cut(s) 1023, 2453
BmeT110I CYCGRG 1 cut(s) 1905
BmgBI CACGTC 1 cut(s) 679
BmgT120I GGNCC 3 cut(s) 156, 1023, 2453
BmiI GGNNCC 3 cut(s) 521, 1074, 2077
BmrFI CCNGG 3 cut(s) 143, 552, 945
BmsI GCATC 4 cut(s) 105, 1187, 1264, 1782
BoxI GACNNNNGTC 1 cut(s) 137
BpmI CTGGAG 1 cut(s) 38
Bpu10I CCTNAGC 1 cut(s) 256
Bpu14I TTCGAA 1 cut(s) 980
BpuMI CCSGG 1 cut(s) 945
BsaAI YACGTR 1 cut(s) 1152
BsaBI GATNNNNATC 1 cut(s) 1796
BsaHI GRCGYC 1 cut(s) 1911
BsaJI CCNNGG 5 cut(s) 69, 142, 551, 943, 1560
BsaWI WCCGGW 1 cut(s) 516
BsaXI ACNNNNNCTCC 4 cut(s) 786, 816, 1070, 1100
Bsc4I CCNNNNNNNGG 4 cut(s) 248, 409, 557, 1032
Bse118I RCCGGY 2 cut(s) 426, 516
Bse1I ACTGG 5 cut(s) 829, 1198, 1344, 1986, 2287
Bse3DI GCAATG 1 cut(s) 1978
Bse8I GATNNNNATC 1 cut(s) 1796
BseBI CCWGG 2 cut(s) 143, 552
BseDI CCNNGG 5 cut(s) 69, 142, 551, 943, 1560
BseJI GATNNNNATC 1 cut(s) 1796
BseLI CCNNNNNNNGG 4 cut(s) 248, 409, 557, 1032
BseMI GCAATG 1 cut(s) 1978
BseMII CTCAG 4 cut(s) 270, 611, 780, 1304
BseNI ACTGG 5 cut(s) 829, 1198, 1344, 1986, 2287
BseRI GAGGAG 4 cut(s) 1142, 1145, 1446, 1539
BsgI GTGCAG 4 cut(s) 916, 1051, 1132, 1290
Bsh1236I CGCG 2 cut(s) 1021, 1166
BshFI GGCC 3 cut(s) 157, 318, 2365
BshNI GGYRCC 1 cut(s) 2075
BshTI ACCGGT 1 cut(s) 516
BsiHKAI GWGCWC 1 cut(s) 449
BsiHKCI CYCGRG 1 cut(s) 1905
BsiSI CCGG 3 cut(s) 427, 517, 945
BsiWI CGTACG 1 cut(s) 1161
BslFI GGGAC 3 cut(s) 568, 1204, 2249
BslI CCNNNNNNNGG 4 cut(s) 248, 409, 557, 1032
BsmAI GTCTC 1 cut(s) 1930
BsmFI GGGAC 3 cut(s) 568, 1204, 2249
BsnI GGCC 3 cut(s) 157, 318, 2365
BsoBI CYCGRG 1 cut(s) 1905
Bsp119I TTCGAA 1 cut(s) 980
Bsp1286I GDGCHC 1 cut(s) 449
Bsp1407I TGTACA 2 cut(s) 609, 771
BspACI CCGC 3 cut(s) 965, 1021, 1248
BspANI GGCC 3 cut(s) 157, 318, 2365
BspCNI CTCAG 4 cut(s) 269, 610, 779, 1303
BspFNI CGCG 2 cut(s) 1021, 1166
BspLI GGNNCC 3 cut(s) 521, 1074, 2077
BspPI GGATC 3 cut(s) 542, 598, 1451
BspQI GCTCTTC 1 cut(s) 70
BspT104I TTCGAA 1 cut(s) 980
BspT107I GGYRCC 1 cut(s) 2075
BsrDI GCAATG 1 cut(s) 1978
BsrFI RCCGGY 2 cut(s) 426, 516
BsrGI TGTACA 2 cut(s) 609, 771
BsrI ACTGG 5 cut(s) 829, 1198, 1344, 1986, 2287
BssAI RCCGGY 2 cut(s) 426, 516
BssECI CCNNGG 5 cut(s) 69, 142, 551, 943, 1560
BssNI GRCGYC 1 cut(s) 1911
BssSI CACGAG 1 cut(s) 526
BssT1I CCWWGG 1 cut(s) 69
Bst2BI CACGAG 1 cut(s) 526
Bst2UI CCWGG 2 cut(s) 143, 552
Bst4CI ACNGT 9 cut(s) 645, 778, 869, 1243, 1561, 1624, 2084, 2450, 2503
Bst6I CTCTTC 4 cut(s) 70, 1591, 1779, 2415
BstACI GRCGYC 1 cut(s) 1911
BstAUI TGTACA 2 cut(s) 609, 771
BstBAI YACGTR 1 cut(s) 1152
BstBI TTCGAA 1 cut(s) 980
BstC8I GCNNGC 6 cut(s) 300, 361, 428, 1123, 1250, 1969
BstDEI CTNAG 5 cut(s) 256, 597, 766, 1230, 1290
BstDSI CCRYGG 1 cut(s) 1560
BstENI CCTNNNNNAGG 1 cut(s) 555
BstFNI CGCG 2 cut(s) 1021, 1166
BstH2I RGCGCY 1 cut(s) 296
BstHHI GCGC 2 cut(s) 295, 382
BstMAI GTCTC 1 cut(s) 1930
BstMWI GCNNNNNNNGC 5 cut(s) 299, 820, 1018, 1038, 2371
BstNI CCWGG 2 cut(s) 143, 552
BstNSI RCATGY 4 cut(s) 434, 939, 1600, 1813
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 3 cut(s) 141, 550, 943
BstUI CGCG 2 cut(s) 1021, 1166
BstXI CCANNNNNNTGG 1 cut(s) 1096
BsuI GTATCC 2 cut(s) 663, 1219
BsuRI GGCC 3 cut(s) 157, 318, 2365
BtgI CCRYGG 1 cut(s) 1560
BtrI CACGTC 1 cut(s) 679
BtsI GCAGTG 1 cut(s) 743
BtsIMutI CAGTG 8 cut(s) 447, 650, 743, 774, 836, 865, 2279, 2455
Cac8I GCNNGC 6 cut(s) 300, 361, 428, 1123, 1250, 1969
CfoI GCGC 2 cut(s) 295, 382
Cfr10I RCCGGY 2 cut(s) 426, 516
Cfr13I GGNCC 3 cut(s) 156, 1023, 2453
CseI GACGC 2 cut(s) 1900, 2329
Csp6I GTAC 6 cut(s) 193, 610, 772, 1162, 1261, 1475
CspAI ACCGGT 1 cut(s) 516
CspCI CAANNNNNGTGG 2 cut(s) 1546, 1581
CviQI GTAC 6 cut(s) 193, 610, 772, 1162, 1261, 1475
DdeI CTNAG 5 cut(s) 256, 597, 766, 1230, 1290
EaeI YGGCCR 1 cut(s) 2363
Eam1104I CTCTTC 4 cut(s) 70, 1591, 1779, 2415
EarI CTCTTC 4 cut(s) 70, 1591, 1779, 2415
Eco130I CCWWGG 1 cut(s) 69
Eco147I AGGCCT 1 cut(s) 318
Eco32I GATATC 1 cut(s) 351
Eco47I GGWCC 2 cut(s) 1023, 2453
Eco47III AGCGCT 1 cut(s) 294
Eco57I CTGAAG 4 cut(s) 23, 1665, 1721, 2325
Eco72I CACGTG 1 cut(s) 1152
Eco88I CYCGRG 1 cut(s) 1905
EcoNI CCTNNNNNAGG 1 cut(s) 555
EcoRI GAATTC 1 cut(s) 1703
EcoRII CCWGG 2 cut(s) 141, 550
EcoRV GATATC 1 cut(s) 351
EcoT14I CCWWGG 1 cut(s) 69
EcoT22I ATGCAT 1 cut(s) 1202
ErhI CCWWGG 1 cut(s) 69
FalI AAGNNNNNCTT 4 cut(s) 1707, 1739, 2174, 2206
FaqI GGGAC 3 cut(s) 568, 1204, 2249
FauI CCCGC 1 cut(s) 1241
FbaI TGATCA 4 cut(s) 88, 451, 862, 2041
FblI GTMKAC 1 cut(s) 780
FspBI CTAG 5 cut(s) 290, 309, 1640, 2162, 2375
FspI TGCGCA 1 cut(s) 381
GlaI GCGC 2 cut(s) 294, 381
GsuI CTGGAG 1 cut(s) 38
HaeII RGCGCY 1 cut(s) 296
HaeIII GGCC 3 cut(s) 157, 318, 2365
HapII CCGG 3 cut(s) 427, 517, 945
HgaI GACGC 2 cut(s) 1900, 2329
HhaI GCGC 2 cut(s) 295, 382
Hin1I GRCGYC 1 cut(s) 1911
Hin6I GCGC 2 cut(s) 293, 380
HinP1I GCGC 2 cut(s) 293, 380
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HindIII AAGCTT 1 cut(s) 1733
HpaII CCGG 3 cut(s) 427, 517, 945
HphI GGTGA 5 cut(s) 119, 446, 954, 2085, 2199
Hpy166II GTNNAC 9 cut(s) 336, 712, 741, 772, 774, 781, 1239, 1475, 2244
Hpy8I GTNNAC 9 cut(s) 336, 712, 741, 772, 774, 781, 1239, 1475, 2244
Hpy99I CGWCG 1 cut(s) 853
HpyAV CCTTC 9 cut(s) 59, 98, 200, 308, 679, 765, 1640, 2172, 2243
HpyCH4III ACNGT 9 cut(s) 645, 778, 869, 1243, 1561, 1624, 2084, 2450, 2503
HpyCH4IV ACGT 4 cut(s) 678, 1151, 1263, 2468
HpyF10VI GCNNNNNNNGC 5 cut(s) 299, 820, 1018, 1038, 2371
HpyF3I CTNAG 5 cut(s) 256, 597, 766, 1230, 1290
HpySE526I ACGT 4 cut(s) 678, 1151, 1263, 2468
Hsp92I GRCGYC 1 cut(s) 1911
HspAI GCGC 2 cut(s) 293, 380
KroI GCCGGC 1 cut(s) 426
KroNI GCCGGC 1 cut(s) 428
Ksp22I TGATCA 4 cut(s) 88, 451, 862, 2041
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 2 cut(s) 1416, 2477
LweI GCATC 4 cut(s) 105, 1187, 1264, 1782
MaeI CTAG 5 cut(s) 290, 309, 1640, 2162, 2375
MaeII ACGT 4 cut(s) 678, 1151, 1263, 2468
MaeIII GTNAC 5 cut(s) 869, 1177, 2091, 2497, 2503
MfeI CAATTG 1 cut(s) 901
MhlI GDGCHC 1 cut(s) 449
MlyI GAGTC 3 cut(s) 128, 2160, 2401
MmeI TCCRAC 4 cut(s) 163, 474, 512, 2203
Mph1103I ATGCAT 1 cut(s) 1202
MroNI GCCGGC 1 cut(s) 426
MroXI GAANNNNTTC 1 cut(s) 2189
MseI TTAA 3 cut(s) 696, 1553, 1665
MslI CAYNNNNRTG 1 cut(s) 215
MspI CCGG 3 cut(s) 427, 517, 945
MspR9I CCNGG 3 cut(s) 143, 552, 945
MunI CAATTG 1 cut(s) 901
MvaI CCWGG 2 cut(s) 143, 552
MvnI CGCG 2 cut(s) 1021, 1166
MwoI GCNNNNNNNGC 5 cut(s) 299, 820, 1018, 1038, 2371
NaeI GCCGGC 1 cut(s) 428
NciI CCSGG 1 cut(s) 945
NgoMIV GCCGGC 1 cut(s) 426
NlaIV GGNNCC 3 cut(s) 521, 1074, 2077
NmuCI GTSAC 2 cut(s) 1177, 2091
NsbI TGCGCA 1 cut(s) 381
NsiI ATGCAT 1 cut(s) 1202
NspI RCATGY 4 cut(s) 434, 939, 1600, 1813
NspV TTCGAA 1 cut(s) 980
PaeR7I CTCGAG 1 cut(s) 1905
PceI AGGCCT 1 cut(s) 318
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 1 cut(s) 1157
PdiI GCCGGC 1 cut(s) 428
PdmI GAANNNNTTC 1 cut(s) 2189
Pfl23II CGTACG 1 cut(s) 1161
PflMI CCANNNNNTGG 1 cut(s) 248
PinAI ACCGGT 1 cut(s) 516
PleI GAGTC 3 cut(s) 127, 2159, 2401
PmaCI CACGTG 1 cut(s) 1152
PmlI CACGTG 1 cut(s) 1152
PpsI GAGTC 3 cut(s) 127, 2159, 2401
Ppu21I YACGTR 1 cut(s) 1152
PshAI GACNNNNGTC 1 cut(s) 137
Psp6I CCWGG 2 cut(s) 141, 550
PspCI CACGTG 1 cut(s) 1152
PspGI CCWGG 2 cut(s) 141, 550
PspLI CGTACG 1 cut(s) 1161
PspN4I GGNNCC 3 cut(s) 521, 1074, 2077
PspPI GGNCC 3 cut(s) 156, 1023, 2453
PspXI VCTCGAGB 1 cut(s) 1905
RsaI GTAC 6 cut(s) 194, 611, 773, 1163, 1262, 1476
RsaNI GTAC 6 cut(s) 193, 610, 772, 1162, 1261, 1475
RseI CAYNNNNRTG 1 cut(s) 215
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 3 cut(s) 696, 1553, 1665
Sau96I GGNCC 3 cut(s) 156, 1023, 2453
SchI GAGTC 3 cut(s) 128, 2160, 2401
ScrFI CCNGG 3 cut(s) 143, 552, 945
SduI GDGCHC 1 cut(s) 449
SfaNI GCATC 4 cut(s) 105, 1187, 1264, 1782
Sfr274I CTCGAG 1 cut(s) 1905
SfuI TTCGAA 1 cut(s) 980
SinI GGWCC 2 cut(s) 1023, 2453
SlaI CTCGAG 1 cut(s) 1905
SmiMI CAYNNNNRTG 1 cut(s) 215
SmlI CTYRAG 1 cut(s) 1905
SmoI CTYRAG 1 cut(s) 1905
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 3 cut(s) 965, 1021, 1248
SspI AATATT 2 cut(s) 373, 466
SspMI CTAG 5 cut(s) 290, 309, 1640, 2162, 2375
StuI AGGCCT 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 141, 550, 943
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 9 cut(s) 645, 778, 869, 1243, 1561, 1624, 2084, 2450, 2503
TaiI ACGT 4 cut(s) 681, 1154, 1266, 2471
TaqI TCGA 9 cut(s) 347, 750, 980, 1548, 1676, 1842, 1906, 1934, 2297
TatI WGTACW 2 cut(s) 609, 771
Tru1I TTAA 3 cut(s) 696, 1553, 1665
Tru9I TTAA 3 cut(s) 696, 1553, 1665
TscAI CASTG 8 cut(s) 454, 650, 743, 774, 836, 872, 2286, 2455
TseFI GTSAC 2 cut(s) 1177, 2091
Tsp45I GTSAC 2 cut(s) 1177, 2091
TspRI CASTG 8 cut(s) 454, 650, 743, 774, 836, 872, 2286, 2455
Van91I CCANNNNNTGG 1 cut(s) 248
VpaK11BI GGWCC 2 cut(s) 1023, 2453
XagI CCTNNNNNAGG 1 cut(s) 555
XapI RAATTY 9 cut(s) 83, 186, 384, 893, 1105, 1445, 1681, 1703, 2215
XceI RCATGY 4 cut(s) 434, 939, 1600, 1813
XhoI CTCGAG 1 cut(s) 1905
XmiI GTMKAC 1 cut(s) 780
XmnI GAANNNNTTC 1 cut(s) 2189
XspI CTAG 5 cut(s) 290, 309, 1640, 2162, 2375
Zsp2I ATGCAT 1 cut(s) 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.