Rmu_sc0016543.1_g000003

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016543.1
Physical Location & Seq
Reverse (-)
3121 .. 3651
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016543.1_g000003.1.cds

Sequence Viewer

Length: 531 bp
atgcactctggaaaaggtttactgaatgcattacttcagtttcttcttctccagttgtgcaattcttctaccacgaacatcacttttgaccaatcaatcagagacggtgacttgttgctctcccacgacgagacctttgtgcttggattcttcagccccggcacatccagaaaacgctatgttggaatttggtacaatttctcagaacacatggttgtgtgggtagctaacagagacgatccaatcaatgataactcaggaatactcacaattagtactgatggaaatctcgttccattgcatagtaataaccaaggccttccgctgtggtcatcaaatgtttctgtctcaccaacaagtaacactaataccatggcacaactcctggatacaggaaatctagttttggttaatcaagacaccaaccacaacaatgtcttatggcagagctttgatcatcccacacatgttcttcttccaaatatgagaattgggatggaccatggtcagaacctgtacctcacatcgtga

Protein Analysis

176

Amino Acids

19.61

Weight (kDa)

5.41

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 323
AclWI GGATC 1 cut(s) 233
AcsI RAATTY 1 cut(s) 186
AcuI CTGAAG 2 cut(s) 20, 136
AdeI CACNNNGTG 1 cut(s) 528
AfaI GTAC 3 cut(s) 194, 277, 518
AflIII ACRYGT 1 cut(s) 466
AjnI CCWGG 1 cut(s) 384
AloI GAACNNNNNNTCC 2 cut(s) 276, 308
AluBI AGCT 2 cut(s) 227, 450
AluI AGCT 2 cut(s) 227, 450
Alw26I GTCTC 4 cut(s) 96, 125, 228, 352
AlwI GGATC 1 cut(s) 233
AlwNI CAGNNNCTG 1 cut(s) 514
AoxI GGCC 1 cut(s) 316
ApoI RAATTY 1 cut(s) 186
ArsI GACNNNNNNTTYG 2 cut(s) 119, 151
AspS9I GGNCC 1 cut(s) 499
AsuC2I CCSGG 1 cut(s) 159
AsuHPI GGTGA 2 cut(s) 119, 342
AvaII GGWCC 1 cut(s) 499
BccI CCATC 2 cut(s) 275, 490
BciT130I CCWGG 1 cut(s) 386
BciVI GTATCC 1 cut(s) 382
BclI TGATCA 1 cut(s) 454
BcnI CCSGG 1 cut(s) 159
BcoDI GTCTC 4 cut(s) 96, 125, 228, 352
BfaI CTAG 1 cut(s) 401
BfuI GTATCC 1 cut(s) 382
BmcAI AGTACT 1 cut(s) 277
Bme1390I CCNGG 2 cut(s) 159, 386
Bme18I GGWCC 1 cut(s) 499
BmgT120I GGNCC 1 cut(s) 499
BmrFI CCNGG 2 cut(s) 159, 386
BoxI GACNNNNGTC 1 cut(s) 504
BpmI CTGGAG 1 cut(s) 35
BpuMI CCSGG 1 cut(s) 159
BsaBI GATNNNNATC 1 cut(s) 285
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 4 cut(s) 157, 313, 372, 502
Bse1I ACTGG 1 cut(s) 52
Bse3DI GCAATG 1 cut(s) 296
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 1 cut(s) 386
BseDI CCNNGG 4 cut(s) 157, 313, 372, 502
BseGI GGATG 3 cut(s) 164, 457, 501
BseJI GATNNNNATC 1 cut(s) 285
BseMI GCAATG 1 cut(s) 296
BseMII CTCAG 2 cut(s) 216, 270
BseNI ACTGG 1 cut(s) 52
BshFI GGCC 1 cut(s) 318
BsiSI CCGG 1 cut(s) 159
BsmAI GTCTC 4 cut(s) 96, 125, 228, 352
BsmBI CGTCTC 2 cut(s) 96, 228
BsmI GAATGC 1 cut(s) 31
BsnI GGCC 1 cut(s) 318
Bso31I GGTCTC 1 cut(s) 125
Bsp143I GATC 2 cut(s) 238, 454
Bsp19I CCATGG 2 cut(s) 372, 502
BspACI CCGC 1 cut(s) 323
BspANI GGCC 1 cut(s) 318
BspCNI CTCAG 2 cut(s) 215, 269
BspPI GGATC 1 cut(s) 233
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 296
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 4 cut(s) 157, 313, 372, 502
BssMI GATC 2 cut(s) 238, 454
BssT1I CCWWGG 3 cut(s) 313, 372, 502
Bst2UI CCWGG 1 cut(s) 386
Bst4CI ACNGT 1 cut(s) 107
BstDEI CTNAG 2 cut(s) 202, 256
BstDSI CCRYGG 2 cut(s) 372, 502
BstF5I GGATG 3 cut(s) 164, 457, 501
BstKTI GATC 2 cut(s) 241, 457
BstMAI GTCTC 4 cut(s) 96, 125, 228, 352
BstMBI GATC 2 cut(s) 238, 454
BstNI CCWGG 1 cut(s) 386
BstNSI RCATGY 1 cut(s) 470
BstPAI GACNNNNGTC 1 cut(s) 504
BstSCI CCNGG 2 cut(s) 157, 384
BsuI GTATCC 1 cut(s) 382
BsuRI GGCC 1 cut(s) 318
BtgI CCRYGG 2 cut(s) 372, 502
BtsCI GGATG 3 cut(s) 164, 457, 501
CaiI CAGNNNCTG 1 cut(s) 514
Cfr13I GGNCC 1 cut(s) 499
Csp6I GTAC 3 cut(s) 193, 276, 517
CviAII CATG 4 cut(s) 211, 373, 467, 503
CviJI RGCY 4 cut(s) 156, 227, 318, 450
CviKI_1 RGCY 4 cut(s) 156, 227, 318, 450
CviQI GTAC 3 cut(s) 193, 276, 517
DdeI CTNAG 2 cut(s) 202, 256
DpnI GATC 2 cut(s) 240, 456
DpnII GATC 2 cut(s) 238, 454
DraIII CACNNNGTG 1 cut(s) 528
Eco130I CCWWGG 3 cut(s) 313, 372, 502
Eco147I AGGCCT 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 1 cut(s) 499
Eco57I CTGAAG 2 cut(s) 20, 136
EcoRII CCWGG 1 cut(s) 384
EcoT14I CCWWGG 3 cut(s) 313, 372, 502
EcoT22I ATGCAT 1 cut(s) 31
ErhI CCWWGG 3 cut(s) 313, 372, 502
Esp3I CGTCTC 2 cut(s) 96, 228
FaeI CATG 4 cut(s) 214, 376, 470, 506
FaiI YATR 8 cut(s) 180, 212, 303, 374, 442, 468, 485, 504
FatI CATG 4 cut(s) 210, 372, 466, 502
FbaI TGATCA 1 cut(s) 454
FokI GGATG 3 cut(s) 151, 444, 508
FspBI CTAG 1 cut(s) 401
GsuI CTGGAG 1 cut(s) 35
HaeIII GGCC 1 cut(s) 318
HapII CCGG 1 cut(s) 159
Hin1II CATG 4 cut(s) 214, 376, 470, 506
HinfI GANTC 1 cut(s) 147
HpaII CCGG 1 cut(s) 159
HphI GGTGA 2 cut(s) 119, 342
Hpy166II GTNNAC 1 cut(s) 20
Hpy188I TCNGA 3 cut(s) 101, 205, 510
Hpy188III TCNNGA 5 cut(s) 9, 168, 258, 416, 528
Hpy8I GTNNAC 1 cut(s) 20
Hpy99I CGWCG 1 cut(s) 131
HpyAV CCTTC 1 cut(s) 329
HpyCH4III ACNGT 1 cut(s) 107
HpyCH4V TGCA 4 cut(s) 4, 29, 60, 301
HpyF3I CTNAG 2 cut(s) 202, 256
Hsp92II CATG 4 cut(s) 214, 376, 470, 506
Ksp22I TGATCA 1 cut(s) 454
Kzo9I GATC 2 cut(s) 238, 454
LpnPI CCDG 8 cut(s) 65, 172, 181, 243, 371, 378, 398, 527
MaeI CTAG 1 cut(s) 401
MaeIII GTNAC 2 cut(s) 107, 359
MalI GATC 2 cut(s) 240, 456
MboI GATC 2 cut(s) 238, 454
MboII GAAGA 6 cut(s) 35, 38, 57, 142, 464, 467
MluCI AATT 5 cut(s) 61, 186, 196, 270, 489
MmeI TCCRAC 1 cut(s) 163
MnlI CCTC 1 cut(s) 530
Mph1103I ATGCAT 1 cut(s) 31
MseI TTAA 1 cut(s) 411
MslI CAYNNNNRTG 2 cut(s) 215, 432
MspA1I CMGCKG 1 cut(s) 325
MspI CCGG 1 cut(s) 159
MspR9I CCNGG 2 cut(s) 159, 386
Mva1269I GAATGC 1 cut(s) 31
MvaI CCWGG 1 cut(s) 386
NciI CCSGG 1 cut(s) 159
NcoI CCATGG 2 cut(s) 372, 502
NdeII GATC 2 cut(s) 238, 454
NlaIII CATG 4 cut(s) 214, 376, 470, 506
NmuCI GTSAC 1 cut(s) 107
NsiI ATGCAT 1 cut(s) 31
NspI RCATGY 1 cut(s) 470
PceI AGGCCT 1 cut(s) 318
PciI ACATGT 1 cut(s) 466
PctI GAATGC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 147
PfoI TCCNGGA 1 cut(s) 384
PscI ACATGT 1 cut(s) 466
PshAI GACNNNNGTC 1 cut(s) 504
Psp6I CCWGG 1 cut(s) 384
PspGI CCWGG 1 cut(s) 384
PspPI GGNCC 1 cut(s) 499
PstNI CAGNNNCTG 1 cut(s) 514
RsaI GTAC 3 cut(s) 194, 277, 518
RsaNI GTAC 3 cut(s) 193, 276, 517
RseI CAYNNNNRTG 2 cut(s) 215, 432
SaqAI TTAA 1 cut(s) 411
Sau3AI GATC 2 cut(s) 238, 454
Sau96I GGNCC 1 cut(s) 499
ScaI AGTACT 1 cut(s) 277
ScrFI CCNGG 2 cut(s) 159, 386
SetI ASST 6 cut(s) 19, 137, 229, 452, 516, 522
SinI GGWCC 1 cut(s) 499
SmiMI CAYNNNNRTG 2 cut(s) 215, 432
Sse9I AATT 5 cut(s) 61, 186, 196, 270, 489
SseBI AGGCCT 1 cut(s) 318
SsiI CCGC 1 cut(s) 323
SspMI CTAG 1 cut(s) 401
StuI AGGCCT 1 cut(s) 318
StyD4I CCNGG 2 cut(s) 157, 384
StyI CCWWGG 3 cut(s) 313, 372, 502
TaaI ACNGT 1 cut(s) 107
TasI AATT 5 cut(s) 61, 186, 196, 270, 489
TatI WGTACW 1 cut(s) 275
TfiI GAWTC 1 cut(s) 147
Tru1I TTAA 1 cut(s) 411
Tru9I TTAA 1 cut(s) 411
TseFI GTSAC 1 cut(s) 107
Tsp45I GTSAC 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 499
XapI RAATTY 1 cut(s) 186
XceI RCATGY 1 cut(s) 470
XspI CTAG 1 cut(s) 401
ZrmI AGTACT 1 cut(s) 277
Zsp2I ATGCAT 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.