Rh3DG237000

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000099
Physical Location & Seq
Reverse (-)
22669278 .. 22673050
3773 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG237000.1

Sequence Viewer

Length: 1641 bp
ATGAATTCTATTCAATGGTCTATGATCACTGCATTGCTCATCTTCCAGCTTCTTTATCTCCCCTCTTGCACTTCCATTGATTCCATTATTCCAAACCAACCCATCAAAGACGGCGACGTTTTAGTCTCAAGCAAGAAGCTCTTTGCGCTGGGGTTCTTCAGCCCTGGAAATTCTTGCAAACGTTACGTTGGAGTTTGGTATAACAAAATTCCAGAGCAGACCATTGTTTGGGTTGCAAATAGAGACAACCCTGTCAATGATTCCTCTGGCCTTCTACTGATCGATGCAGATGGAGGCCTTGTCATATATGGAAAGGACAGAAAACTCCCTCTTTGGTCAGCTAATGTTACTCTCTCTTCTCCAAAAAACTCCATGGCCAAGCTGTTGGATACAGGTAACTTTGTTTTGTTTGAGAATGGTCGGAGCCTGTGGGAAGGGTTTGATTATCCCTCAAATACAATGCTTGCCTTTATGAAAATTGGGCTGAACAAGCGATCCGGGTTCAACCGGTTCCTAACTTCTTGGAAGTCCCAAGATGACCCGGGAACCGGCAATTTCTCATTTAGGATTGATCCAAATGGGTTTCCGCAGCTGTTTTTGTACAAAGGTCAAGCTCCCTGGTGGCGGGCAAGATCTTGGATCGGGCGATGGAGTGGTGTCCCCGAAATGACTCCTAATTTCATCGGACGACTCAATCTTCTCAACGTTAGTTTTGTGAACAATCAAGATGAGCTATCTGTCATGTATGGCATTAAGGACGACTCAATCTTCTCAAGGGCGGTGCTTGATGAATCGGGAATCATCGAACGGTCCACGTGGCAAGATCAGGAACACCAATGGATCAAGTACTGGTCTGCCCCGGTAGAGATATGTGACAAATATGGAAAGTGTGGTCCAAATAGCAACTGTGACCCTTACAATGCTGGTGAGTTCGAGTGTACATGCCTACCTGGGTTTGAACCAAAGTTGATCCATGCATGGAACTTGAGAAATGGCTCAGGTGGGTGTGTGAGGAAAAAAGGAGTATCTGTGTGTAAAAATGGAGAAGGGTTCGTGAAGGTGTCACTAGTAAAGGCACCAGACTCATCTAACGCACGTGTAAACTTGACCTTGGGTCCAAAAGAATGTGAAGAGGAATGCTTAAGGAATTGTTCTTGTATGGCATACTCGAGTGTAGGTGATCCGCAAGGAGGGAATGGATGCATGACTTGGTACGGGGACTTGATGGATACAAGGACTTACACGAATGTCAATCAAGATTTATATGTTCGAGTTGATTCAATTGAATTAGCTAAATATGCAAAGAAGTCGAATGGTTTTCATAGCAAGAAGGGAAAGCTAGAAATTACGATGGCATCTATTTTAGTGTTCTTTGCTGTGATCTCTATCGCATATTGGTCCACAAAGATGAAGAGAAAAGGTACGGAAAGACAAAATCAATTTTCATTTGGGGCAATCACACCTTCAATCAACTTGGAAGATTTTCCTAGTAGAACAGATCCTGATGATAGCAGATTAAAGTCGGATCTACCTTTCTTTGATCTAAGCACCATATCTGCAGCCACAAACAATTTCTCTGATCCAAACAGGCTTGGAGAAGGCGGATTTGGCTACGTTTATAAGGTAGTTGTCCTCAATTAG

Protein Analysis

546

Amino Acids

61.11

Weight (kDa)

8.25

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 176 9.6e-31 D-mannose binding lectin
S_locus_glycop PF00954 208 - 322 4.1e-23 S-locus glycoprotein domain
PAN_2 PF08276 345 - 411 7.2e-19 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1620
AasI GACNNNNNNGTC 2 cut(s) 122, 251
AccB1I GGYRCC 1 cut(s) 1075
AccB7I CCANNNNNTGG 1 cut(s) 228
AciI CCGC 5 cut(s) 587, 625, 779, 1184, 1602
AclI AACGTT 2 cut(s) 181, 705
AclWI GGATC 9 cut(s) 489, 566, 647, 848, 964, 1175, 1493, 1533, 1574
AcoI YGGCCR 1 cut(s) 375
AcsI RAATTY 3 cut(s) 4, 169, 207
AcuI CTGAAG 1 cut(s) 142
AcvI CACGTG 2 cut(s) 816, 1097
AfaI GTAC 5 cut(s) 602, 848, 940, 1214, 1423
AfiI CCNNNNNNNGG 4 cut(s) 228, 548, 624, 1190
AflII CTTAAG 1 cut(s) 1141
AflIII ACRYGT 1 cut(s) 1096
AgeI ACCGGT 1 cut(s) 507
AgsI TTSAA 6 cut(s) 14, 505, 959, 1281, 1286, 1467
AhdI GACNNNNNGTC 1 cut(s) 1113
AhlI ACTAGT 1 cut(s) 1066
AjnI CCWGG 3 cut(s) 163, 617, 949
AjuI GAANNNNNNNTTGG 2 cut(s) 1590, 1622
AloI GAACNNNNNNTCC 2 cut(s) 479, 511
AluBI AGCT 9 cut(s) 49, 139, 341, 382, 592, 614, 733, 1292, 1339
AluI AGCT 9 cut(s) 49, 139, 341, 382, 592, 614, 733, 1292, 1339
Alw26I GTCTC 2 cut(s) 130, 237
AlwI GGATC 9 cut(s) 489, 566, 647, 848, 964, 1175, 1493, 1533, 1574
AlwNI CAGNNNCTG 1 cut(s) 1502
Ama87I CYCGRG 2 cut(s) 541, 1168
AoxI GGCC 3 cut(s) 268, 295, 375
ApeKI GCWGC 2 cut(s) 589, 1559
ApoI RAATTY 3 cut(s) 4, 169, 207
AsiGI ACCGGT 1 cut(s) 507
Asp700I GAANNNNTTC 1 cut(s) 1482
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 4 cut(s) 810, 893, 1115, 1398
AsuC2I CCSGG 4 cut(s) 499, 542, 543, 860
AsuHPI GGTGA 2 cut(s) 938, 1190
AvaI CYCGRG 2 cut(s) 541, 1168
AvaII GGWCC 4 cut(s) 810, 893, 1115, 1398
BalI TGGCCA 1 cut(s) 377
BanI GGYRCC 1 cut(s) 1075
BbrPI CACGTG 2 cut(s) 816, 1097
BbvI GCAGC 2 cut(s) 601, 1571
BccI CCATC 5 cut(s) 110, 284, 642, 1219, 1345
BceAI ACGGC 1 cut(s) 127
BcgI CGANNNNNNTGC 2 cut(s) 1290, 1324
BciT130I CCWGG 3 cut(s) 165, 619, 951
BciVI GTATCC 2 cut(s) 382, 1222
BclI TGATCA 1 cut(s) 24
BcnI CCSGG 4 cut(s) 499, 542, 543, 860
BcoDI GTCTC 2 cut(s) 130, 237
BcuI ACTAGT 1 cut(s) 1066
BfaI CTAG 3 cut(s) 1067, 1340, 1488
BfmI CTRYAG 1 cut(s) 1557
BfrI CTTAAG 1 cut(s) 1141
BfuI GTATCC 2 cut(s) 382, 1222
BglII AGATCT 1 cut(s) 632
BisI GCNGC 2 cut(s) 590, 1560
BlsI GCNGC 2 cut(s) 591, 1561
BmcAI AGTACT 1 cut(s) 848
Bme1390I CCNGG 7 cut(s) 165, 499, 542, 543, 619, 860, 951
Bme18I GGWCC 4 cut(s) 810, 893, 1115, 1398
BmeRI GACNNNNNGTC 1 cut(s) 1113
BmeT110I CYCGRG 2 cut(s) 541, 1168
BmgT120I GGNCC 4 cut(s) 810, 893, 1115, 1398
BmiI GGNNCC 5 cut(s) 425, 512, 547, 1077, 1116
BmrFI CCNGG 7 cut(s) 165, 499, 542, 543, 619, 860, 951
BmsI GCATC 3 cut(s) 274, 1190, 1364
Bpu10I CCTNAGC 1 cut(s) 997
BpuEI CTTGAG 3 cut(s) 112, 757, 1006
BpuMI CCSGG 4 cut(s) 499, 542, 543, 860
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 2 cut(s) 816, 1097
BsaBI GATNNNNATC 1 cut(s) 1385
BsaJI CCNNGG 7 cut(s) 163, 372, 541, 617, 858, 950, 1110
BsaWI WCCGGW 1 cut(s) 507
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 1014, 1044
Bsc4I CCNNNNNNNGG 4 cut(s) 228, 548, 624, 1190
Bse118I RCCGGY 2 cut(s) 507, 548
Bse1I ACTGG 1 cut(s) 854
Bse3DI GCAATG 1 cut(s) 32
Bse8I GATNNNNATC 1 cut(s) 1385
BseBI CCWGG 3 cut(s) 165, 619, 951
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 7 cut(s) 163, 372, 541, 617, 858, 950, 1110
BseGI GGATG 1 cut(s) 1205
BseJI GATNNNNATC 1 cut(s) 1385
BseLI CCNNNNNNNGG 4 cut(s) 228, 548, 624, 1190
BseMI GCAATG 1 cut(s) 32
BseMII CTCAG 1 cut(s) 1011
BseNI ACTGG 1 cut(s) 854
BseXI GCAGC 2 cut(s) 601, 1571
BseYI CCCAGC 1 cut(s) 148
BshFI GGCC 3 cut(s) 270, 297, 377
BshNI GGYRCC 1 cut(s) 1075
BshTI ACCGGT 1 cut(s) 507
BshVI ATCGAT 1 cut(s) 282
BsiHKCI CYCGRG 2 cut(s) 541, 1168
BsiSI CCGG 5 cut(s) 498, 508, 542, 549, 860
BslFI GGGAC 3 cut(s) 514, 644, 1232
BslI CCNNNNNNNGG 4 cut(s) 228, 548, 624, 1190
BsmAI GTCTC 2 cut(s) 130, 237
BsmFI GGGAC 3 cut(s) 514, 644, 1232
BsmI GAATGC 1 cut(s) 1142
BsnI GGCC 3 cut(s) 270, 297, 377
BsoBI CYCGRG 2 cut(s) 541, 1168
Bsp1407I TGTACA 2 cut(s) 600, 938
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 5 cut(s) 587, 625, 779, 1184, 1602
BspANI GGCC 3 cut(s) 270, 297, 377
BspCNI CTCAG 1 cut(s) 1010
BspDI ATCGAT 1 cut(s) 282
BspLI GGNNCC 5 cut(s) 425, 512, 547, 1077, 1116
BspMAI CTGCAG 1 cut(s) 1561
BspPI GGATC 9 cut(s) 489, 566, 647, 848, 964, 1175, 1493, 1533, 1574
BspT107I GGYRCC 1 cut(s) 1075
BspTI CTTAAG 1 cut(s) 1141
BsrDI GCAATG 1 cut(s) 32
BsrFI RCCGGY 2 cut(s) 507, 548
BsrGI TGTACA 2 cut(s) 600, 938
BsrI ACTGG 1 cut(s) 854
BssAI RCCGGY 2 cut(s) 507, 548
BssECI CCNNGG 7 cut(s) 163, 372, 541, 617, 858, 950, 1110
BssT1I CCWWGG 2 cut(s) 372, 1110
Bst2UI CCWGG 3 cut(s) 165, 619, 951
Bst4CI ACNGT 2 cut(s) 810, 908
Bst6I CTCTTC 3 cut(s) 361, 1125, 1406
BstAFI CTTAAG 1 cut(s) 1141
BstAUI TGTACA 2 cut(s) 600, 938
BstBAI YACGTR 2 cut(s) 816, 1097
BstC8I GCNNGC 2 cut(s) 465, 627
BstDEI CTNAG 2 cut(s) 997, 1544
BstDSI CCRYGG 1 cut(s) 372
BstF5I GGATG 1 cut(s) 1205
BstHHI GCGC 1 cut(s) 148
BstMAI GTCTC 2 cut(s) 130, 237
BstMWI GCNNNNNNNGC 4 cut(s) 145, 490, 1298, 1608
BstNI CCWGG 3 cut(s) 165, 619, 951
BstNSI RCATGY 1 cut(s) 945
BstSCI CCNGG 7 cut(s) 163, 497, 540, 541, 617, 858, 949
BstSFI CTRYAG 1 cut(s) 1557
BstV1I GCAGC 2 cut(s) 601, 1571
BstX2I RGATCY 3 cut(s) 632, 1498, 1525
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 3 cut(s) 632, 1498, 1525
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 2 cut(s) 382, 1222
BsuRI GGCC 3 cut(s) 270, 297, 377
BsuTUI ATCGAT 1 cut(s) 282
BtgI CCRYGG 1 cut(s) 372
BtgZI GCGATG 1 cut(s) 661
BtsCI GGATG 1 cut(s) 1205
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 27
Cac8I GCNNGC 2 cut(s) 465, 627
CaiI CAGNNNCTG 1 cut(s) 1502
CfoI GCGC 1 cut(s) 148
Cfr10I RCCGGY 2 cut(s) 507, 548
Cfr13I GGNCC 4 cut(s) 810, 893, 1115, 1398
Cfr9I CCCGGG 1 cut(s) 541
ClaI ATCGAT 1 cut(s) 282
Csp6I GTAC 5 cut(s) 601, 847, 939, 1213, 1422
CspAI ACCGGT 1 cut(s) 507
CviAII CATG 6 cut(s) 373, 742, 942, 974, 978, 1204
CviQI GTAC 5 cut(s) 601, 847, 939, 1213, 1422
DdeI CTNAG 2 cut(s) 997, 1544
DrdI GACNNNNNNGTC 2 cut(s) 122, 251
DriI GACNNNNNGTC 1 cut(s) 1113
DseDI GACNNNNNNGTC 2 cut(s) 122, 251
EaeI YGGCCR 1 cut(s) 375
Eam1104I CTCTTC 3 cut(s) 361, 1125, 1406
Eam1105I GACNNNNNGTC 1 cut(s) 1113
EarI CTCTTC 3 cut(s) 361, 1125, 1406
EciI GGCGGA 1 cut(s) 1617
Eco130I CCWWGG 2 cut(s) 372, 1110
Eco147I AGGCCT 1 cut(s) 297
Eco47I GGWCC 4 cut(s) 810, 893, 1115, 1398
Eco57I CTGAAG 1 cut(s) 142
Eco72I CACGTG 2 cut(s) 816, 1097
Eco88I CYCGRG 2 cut(s) 541, 1168
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 3 cut(s) 163, 617, 949
EcoT14I CCWWGG 2 cut(s) 372, 1110
EcoT22I ATGCAT 2 cut(s) 979, 1205
ErhI CCWWGG 2 cut(s) 372, 1110
FaeI CATG 6 cut(s) 376, 745, 945, 977, 981, 1207
FalI AAGNNNNNCTT 2 cut(s) 125, 157
FaqI GGGAC 3 cut(s) 514, 644, 1232
FatI CATG 6 cut(s) 372, 741, 941, 973, 977, 1203
FauI CCCGC 1 cut(s) 618
FbaI TGATCA 1 cut(s) 24
Fnu4HI GCNGC 2 cut(s) 590, 1560
FokI GGATG 1 cut(s) 1212
Fsp4HI GCNGC 2 cut(s) 590, 1560
FspBI CTAG 3 cut(s) 1067, 1340, 1488
GlaI GCGC 1 cut(s) 147
GluI GCNGC 2 cut(s) 590, 1560
GsaI CCCAGC 1 cut(s) 152
HaeIII GGCC 3 cut(s) 270, 297, 377
HapII CCGG 5 cut(s) 498, 508, 542, 549, 860
HhaI GCGC 1 cut(s) 148
Hin1II CATG 6 cut(s) 376, 745, 945, 977, 981, 1207
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HinfI GANTC 9 cut(s) 80, 260, 670, 690, 761, 791, 798, 1082, 1277
HpaII CCGG 5 cut(s) 498, 508, 542, 549, 860
HphI GGTGA 2 cut(s) 938, 1190
Hpy166II GTNNAC 5 cut(s) 718, 813, 939, 1102, 1401
Hpy188I TCNGA 4 cut(s) 423, 686, 1525, 1579
Hpy188III TCNNGA 7 cut(s) 212, 725, 795, 827, 1054, 1256, 1502
Hpy8I GTNNAC 5 cut(s) 718, 813, 939, 1102, 1401
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 281, 428, 1040, 1051, 1324, 1473, 1592
HpyCH4III ACNGT 2 cut(s) 810, 908
HpyCH4IV ACGT 7 cut(s) 117, 181, 186, 705, 815, 1096, 1614
HpyCH4V TGCA 9 cut(s) 32, 69, 177, 236, 287, 977, 1203, 1301, 1559
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 490, 1298, 1608
HpyF3I CTNAG 2 cut(s) 997, 1544
HpySE526I ACGT 7 cut(s) 117, 181, 186, 705, 815, 1096, 1614
Hsp92II CATG 6 cut(s) 376, 745, 945, 977, 981, 1207
HspAI GCGC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 24
LmnI GCTCC 2 cut(s) 423, 619
Lsp1109I GCAGC 2 cut(s) 601, 1571
LweI GCATC 3 cut(s) 274, 1190, 1364
MaeI CTAG 3 cut(s) 1067, 1340, 1488
MaeII ACGT 7 cut(s) 117, 181, 186, 705, 815, 1096, 1614
MaeIII GTNAC 6 cut(s) 182, 346, 395, 872, 908, 1062
MboII GAAGA 8 cut(s) 34, 148, 348, 689, 760, 1142, 1423, 1490
MfeI CAATTG 1 cut(s) 1281
MflI RGATCY 3 cut(s) 632, 1498, 1525
MlsI TGGCCA 1 cut(s) 377
MluNI TGGCCA 1 cut(s) 377
MlyI GAGTC 4 cut(s) 664, 684, 755, 1076
MmeI TCCRAC 4 cut(s) 169, 366, 401, 1503
MnlI CCTC 8 cut(s) 73, 274, 287, 339, 460, 1005, 1126, 1184
Mox20I TGGCCA 1 cut(s) 377
Mph1103I ATGCAT 2 cut(s) 979, 1205
MroXI GAANNNNTTC 1 cut(s) 1482
MscI TGGCCA 1 cut(s) 377
MseI TTAA 3 cut(s) 753, 1142, 1517
MslI CAYNNNNRTG 1 cut(s) 1406
Msp20I TGGCCA 1 cut(s) 377
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 1141
MspI CCGG 5 cut(s) 498, 508, 542, 549, 860
MspR9I CCNGG 7 cut(s) 165, 499, 542, 543, 619, 860, 951
MunI CAATTG 1 cut(s) 1281
Mva1269I GAATGC 1 cut(s) 1142
MvaI CCWGG 3 cut(s) 165, 619, 951
MwoI GCNNNNNNNGC 4 cut(s) 145, 490, 1298, 1608
NciI CCSGG 4 cut(s) 499, 542, 543, 860
NcoI CCATGG 1 cut(s) 372
NlaIII CATG 6 cut(s) 376, 745, 945, 977, 981, 1207
NlaIV GGNNCC 5 cut(s) 425, 512, 547, 1077, 1116
NmuCI GTSAC 3 cut(s) 872, 908, 1062
NsiI ATGCAT 2 cut(s) 979, 1205
NspI RCATGY 1 cut(s) 945
PaeR7I CTCGAG 1 cut(s) 1168
PceI AGGCCT 1 cut(s) 297
PctI GAATGC 1 cut(s) 1142
PdmI GAANNNNTTC 1 cut(s) 1482
PfeI GAWTC 5 cut(s) 80, 260, 791, 798, 1277
PflMI CCANNNNNTGG 1 cut(s) 228
PinAI ACCGGT 1 cut(s) 507
PkrI GCNGC 2 cut(s) 591, 1561
PleI GAGTC 4 cut(s) 664, 684, 755, 1076
PmaCI CACGTG 2 cut(s) 816, 1097
PmlI CACGTG 2 cut(s) 816, 1097
PpsI GAGTC 4 cut(s) 664, 684, 755, 1076
Ppu21I YACGTR 2 cut(s) 816, 1097
PsiI TTATAA 1 cut(s) 1620
Psp1406I AACGTT 2 cut(s) 181, 705
Psp6I CCWGG 3 cut(s) 163, 617, 949
PspCI CACGTG 2 cut(s) 816, 1097
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 3 cut(s) 163, 617, 949
PspN4I GGNNCC 5 cut(s) 425, 512, 547, 1077, 1116
PspPI GGNCC 4 cut(s) 810, 893, 1115, 1398
PspXI VCTCGAGB 1 cut(s) 1168
PstI CTGCAG 1 cut(s) 1561
PstNI CAGNNNCTG 1 cut(s) 1502
PsuI RGATCY 3 cut(s) 632, 1498, 1525
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 5 cut(s) 602, 848, 940, 1214, 1423
RsaNI GTAC 5 cut(s) 601, 847, 939, 1213, 1422
RseI CAYNNNNRTG 1 cut(s) 1406
SaqAI TTAA 3 cut(s) 753, 1142, 1517
SatI GCNGC 2 cut(s) 590, 1560
Sau96I GGNCC 4 cut(s) 810, 893, 1115, 1398
ScaI AGTACT 1 cut(s) 848
SchI GAGTC 4 cut(s) 664, 684, 755, 1076
ScrFI CCNGG 7 cut(s) 165, 499, 542, 543, 619, 860, 951
SfaNI GCATC 3 cut(s) 274, 1190, 1364
SfcI CTRYAG 1 cut(s) 1557
Sfr274I CTCGAG 1 cut(s) 1168
SinI GGWCC 4 cut(s) 810, 893, 1115, 1398
SlaI CTCGAG 1 cut(s) 1168
SmaI CCCGGG 1 cut(s) 543
SmiMI CAYNNNNRTG 1 cut(s) 1406
SmlI CTYRAG 5 cut(s) 127, 772, 985, 1141, 1168
SmoI CTYRAG 5 cut(s) 127, 772, 985, 1141, 1168
SpeI ACTAGT 1 cut(s) 1066
SseBI AGGCCT 1 cut(s) 297
SsiI CCGC 5 cut(s) 587, 625, 779, 1184, 1602
SspMI CTAG 3 cut(s) 1067, 1340, 1488
StuI AGGCCT 1 cut(s) 297
StyD4I CCNGG 7 cut(s) 163, 497, 540, 541, 617, 858, 949
StyI CCWWGG 2 cut(s) 372, 1110
TaaI ACNGT 2 cut(s) 810, 908
TaiI ACGT 7 cut(s) 120, 184, 189, 708, 818, 1099, 1617
TaqI TCGA 6 cut(s) 282, 804, 933, 1169, 1270, 1310
TatI WGTACW 3 cut(s) 600, 846, 938
TfiI GAWTC 5 cut(s) 80, 260, 791, 798, 1277
Tru1I TTAA 3 cut(s) 753, 1142, 1517
Tru9I TTAA 3 cut(s) 753, 1142, 1517
TscAI CASTG 1 cut(s) 34
TseFI GTSAC 3 cut(s) 872, 908, 1062
TseI GCWGC 2 cut(s) 589, 1559
Tsp45I GTSAC 3 cut(s) 872, 908, 1062
TspDTI ATGAA 7 cut(s) 17, 488, 670, 804, 1310, 1424, 1434
TspGWI ACGGA 1 cut(s) 1439
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 1 cut(s) 34
Van91I CCANNNNNTGG 1 cut(s) 228
Vha464I CTTAAG 1 cut(s) 1141
VpaK11BI GGWCC 4 cut(s) 810, 893, 1115, 1398
XapI RAATTY 3 cut(s) 4, 169, 207
XceI RCATGY 1 cut(s) 945
XhoI CTCGAG 1 cut(s) 1168
XmaI CCCGGG 1 cut(s) 541
XmnI GAANNNNTTC 1 cut(s) 1482
XspI CTAG 3 cut(s) 1067, 1340, 1488
ZrmI AGTACT 1 cut(s) 848
Zsp2I ATGCAT 2 cut(s) 979, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.