Rroxscaffold_1G00044900

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000099
Physical Location & Seq
Forward (+)
63937783 .. 63942244
4462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044900.1

Sequence Viewer

Length: 1713 bp
ATGAGTTCCAGTATCGAAGCGTTTATCCAGATATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTCCCCTTGACGCCCTTAAGCCAGACCGTCCCATCAGAGACGGCGACGTTTTAGTCTCTAACAAGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAAATCTGGGCACCGCTACGCTGGAGTTTGGTATAACAAGATTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGACTCCTATGGAGTGCTATCGATCAACGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAACTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTCCCTCTATGAAGATTGGGCTGAACCGGCGGTCCGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAACTGGGAGTTGTACGTGTGGGATAAACCCGATGGGGGTTCTGCAGTTGTTTCTGCGCAAGGGTAGAGAAACATTGTGGCGGGGCGGCCCTTGGACTGGGCACAGATTGAGCGGTACCGCTGGAGACTACAAGTCAAGTATTGTCAACAATGAAGACGAGATATCCTTCGCGTATTTGGACTCAGAGATCACAGAGATCACAAGGATGGTGATAGATGAATCAGGAATACTTCAAGGGTTCACGTGGAAGGATCAATGGATCAAATTCTACTCCTACCCGACTGGGTGGTGTGATTCCTACGGACAGTGCGGTCCAAATACTAACTGTGACCCAGCCAAGGACTATAAGTTCGCTTGCACGTGCCTACCTGGGTTCGAATCCAAGTCACCTGGATTGAGTCTTGGTGAGGGTGGGTGCATTAGGAAAGCGGAAGCCTCCACATGTCAAAATGGAGAAAGGTTCATGAAGGTGCCGAGTGTAAAACTACCGGACTCGTCTACGGCACGTGTGAACATGAGCACGAGTTTGGAAGAGTGCAGACAAAAGTGCTTGCTGGATTGTTCTTGCACATCATTCACGAGTGCGGACGACCGGGGCGGTGGGATCGGGTGTTTGACATGGCACGGGGACTTGATGGACATGAGGACTTTCGCCGACGTTGGTCAAGATTTATATGTTCGAGTCGACGCAACTTTTTTAGCTCAATATGCAAAGTCAGGTGGTTTTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTATGCGTAGGCAAAATAAATATTCATTTGAACTTACTGCTGGGTCAACCTACTTCGAAGAAGCTACCGGTGGATTAGTTCTTGATGATAGTAGAATAAACTCGGAGTTACTATTATTTCATCTAAACACCGTAGCCACCGCCACAAACAATTTCTCCATTGAAAACAAACTTGGAGAAGGAGGGTTTGGCTCTGTTTATAAGGGGATACTTTACGATGGAAAAGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCGATTGCAAAACTCCAAACACGAAACCTTGTTAAGATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

570

Amino Acids

62.95

Weight (kDa)

7.44

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 3.3e-34 D-mannose binding lectin
S_locus_glycop PF00954 211 - 313 3.4e-18 S-locus glycoprotein domain
PAN_2 PF08276 333 - 399 2.7e-21 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1578
AasI GACNNNNNNGTC 3 cut(s) 125, 254, 864
Acc16I TGCGCA 1 cut(s) 611
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 3 cut(s) 180, 668, 1024
AccB7I CCANNNNNTGG 1 cut(s) 231
AccBSI CCGCTC 1 cut(s) 666
AccI GTMKAC 2 cut(s) 1052, 1239
AccII CGCG 1 cut(s) 725
AclI AACGTT 1 cut(s) 348
AclWI GGATC 4 cut(s) 813, 821, 1166, 1324
AcoI YGGCCR 1 cut(s) 1636
AcsI RAATTY 1 cut(s) 818
AcuI CTGAAG 1 cut(s) 145
AcvI CACGTG 3 cut(s) 798, 915, 1061
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 2 cut(s) 568, 670
AfiI CCNNNNNNNGG 7 cut(s) 231, 336, 557, 589, 650, 892, 1353
AflII CTTAAG 1 cut(s) 89
AflIII ACRYGT 3 cut(s) 569, 995, 1060
AgeI ACCGGT 1 cut(s) 1445
AgsI TTSAA 4 cut(s) 788, 1409, 1541, 1649
AhdI GACNNNNNGTC 1 cut(s) 685
AjnI CCWGG 2 cut(s) 922, 943
AjuI GAANNNNNNNTTGG 4 cut(s) 1533, 1548, 1565, 1580
AloI GAACNNNNNNTCC 4 cut(s) 488, 520, 887, 919
AluBI AGCT 4 cut(s) 73, 385, 1256, 1442
AluI AGCT 4 cut(s) 73, 385, 1256, 1442
Alw21I GWGCWC 1 cut(s) 1076
Alw26I GTCTC 4 cut(s) 105, 133, 240, 672
AlwI GGATC 4 cut(s) 813, 821, 1166, 1324
Ama87I CYCGRG 1 cut(s) 550
AoxI GGCC 3 cut(s) 298, 640, 1636
ApoI RAATTY 1 cut(s) 818
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
AsiGI ACCGGT 1 cut(s) 1445
Asp700I GAANNNNTTC 1 cut(s) 1668
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 5 cut(s) 319, 339, 504, 641, 866
AsuC2I CCSGG 5 cut(s) 168, 508, 551, 552, 1148
AsuHPI GGTGA 5 cut(s) 302, 354, 775, 933, 971
AsuII TTCGAA 2 cut(s) 930, 1434
AvaI CYCGRG 1 cut(s) 550
AvaII GGWCC 4 cut(s) 319, 339, 504, 866
BaeGI GKGCMC 2 cut(s) 183, 657
BalI TGGCCA 1 cut(s) 1638
BanI GGYRCC 3 cut(s) 180, 668, 1024
BauI CACGAG 2 cut(s) 1075, 1132
BbrPI CACGTG 3 cut(s) 798, 915, 1061
BbsI GAAGAC 1 cut(s) 714
Bbv12I GWGCWC 1 cut(s) 1076
BccI CCATC 6 cut(s) 113, 287, 580, 754, 1183, 1589
BceAI ACGGC 3 cut(s) 130, 1071, 1595
BciT130I CCWGG 2 cut(s) 924, 945
BciVI GTATCC 2 cut(s) 385, 1578
BcnI CCSGG 5 cut(s) 168, 508, 551, 552, 1148
BcoDI GTCTC 4 cut(s) 105, 133, 240, 672
BfaI CTAG 2 cut(s) 60, 152
BfmI CTRYAG 1 cut(s) 596
BfrI CTTAAG 1 cut(s) 89
BfuI GTATCC 2 cut(s) 385, 1578
BisI GCNGC 1 cut(s) 640
BlsI GCNGC 1 cut(s) 641
Bme1390I CCNGG 7 cut(s) 168, 508, 551, 552, 924, 945, 1148
Bme18I GGWCC 4 cut(s) 319, 339, 504, 866
BmeRI GACNNNNNGTC 1 cut(s) 685
BmeT110I CYCGRG 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 319, 339, 504, 641, 866
BmiI GGNNCC 4 cut(s) 182, 321, 670, 1026
BmrFI CCNGG 7 cut(s) 168, 508, 551, 552, 924, 945, 1148
BmrI ACTGGG 4 cut(s) 248, 567, 660, 846
BmuI ACTGGG 4 cut(s) 248, 567, 660, 846
BoxI GACNNNNGTC 1 cut(s) 1215
BpiI GAAGAC 1 cut(s) 714
BpmI CTGGAG 2 cut(s) 213, 696
Bpu14I TTCGAA 2 cut(s) 930, 1434
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 5 cut(s) 168, 508, 551, 552, 1148
Bsa29I ATCGAT 1 cut(s) 281
BsaAI YACGTR 4 cut(s) 570, 798, 915, 1061
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 7 cut(s) 166, 550, 644, 891, 923, 1147, 1639
BsaWI WCCGGW 2 cut(s) 1042, 1445
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 1517, 1547
Bsc4I CCNNNNNNNGG 7 cut(s) 231, 336, 557, 589, 650, 892, 1353
Bse118I RCCGGY 2 cut(s) 498, 1445
Bse1I ACTGG 5 cut(s) 9, 254, 562, 655, 841
BseBI CCWGG 2 cut(s) 924, 945
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 7 cut(s) 166, 550, 644, 891, 923, 1147, 1639
BseGI GGATG 2 cut(s) 765, 1371
BseLI CCNNNNNNNGG 7 cut(s) 231, 336, 557, 589, 650, 892, 1353
BseMII CTCAG 2 cut(s) 474, 750
BseNI ACTGG 5 cut(s) 9, 254, 562, 655, 841
BseSI GKGCMC 2 cut(s) 183, 657
BseYI CCCAGC 2 cut(s) 886, 1418
BsgI GTGCAG 1 cut(s) 1111
Bsh1236I CGCG 1 cut(s) 725
Bsh1285I CGRYCG 1 cut(s) 1147
BshFI GGCC 3 cut(s) 300, 642, 1638
BshNI GGYRCC 3 cut(s) 180, 668, 1024
BshTI ACCGGT 1 cut(s) 1445
BshVI ATCGAT 1 cut(s) 281
BsiEI CGRYCG 1 cut(s) 1147
BsiHKAI GWGCWC 1 cut(s) 1076
BsiHKCI CYCGRG 1 cut(s) 550
BsiSI CCGG 7 cut(s) 168, 499, 507, 551, 1043, 1147, 1446
BslFI GGGAC 2 cut(s) 87, 1196
BslI CCNNNNNNNGG 7 cut(s) 231, 336, 557, 589, 650, 892, 1353
BsmAI GTCTC 4 cut(s) 105, 133, 240, 672
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 87, 1196
BsnI GGCC 3 cut(s) 300, 642, 1638
BsoBI CYCGRG 1 cut(s) 550
Bsp119I TTCGAA 2 cut(s) 930, 1434
Bsp1286I GDGCHC 3 cut(s) 183, 657, 1076
Bsp143I GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
BspANI GGCC 3 cut(s) 300, 642, 1638
BspCNI CTCAG 2 cut(s) 473, 749
BspDI ATCGAT 1 cut(s) 281
BspFNI CGCG 1 cut(s) 725
BspHI TCATGA 1 cut(s) 1017
BspLI GGNNCC 4 cut(s) 182, 321, 670, 1026
BspMAI CTGCAG 1 cut(s) 600
BspPI GGATC 4 cut(s) 813, 821, 1166, 1324
BspT104I TTCGAA 2 cut(s) 930, 1434
BspT107I GGYRCC 3 cut(s) 180, 668, 1024
BspTI CTTAAG 1 cut(s) 89
BsrBI CCGCTC 1 cut(s) 666
BsrFI RCCGGY 2 cut(s) 498, 1445
BsrI ACTGG 5 cut(s) 9, 254, 562, 655, 841
BssAI RCCGGY 2 cut(s) 498, 1445
BssECI CCNNGG 7 cut(s) 166, 550, 644, 891, 923, 1147, 1639
BssMI GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 2 cut(s) 1075, 1132
BssT1I CCWWGG 3 cut(s) 644, 891, 1639
Bst2BI CACGAG 2 cut(s) 1075, 1132
Bst2UI CCWGG 2 cut(s) 924, 945
Bst4CI ACNGT 6 cut(s) 101, 290, 861, 881, 1327, 1510
Bst6I CTCTTC 4 cut(s) 47, 364, 1080, 1644
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 89
BstBAI YACGTR 4 cut(s) 570, 798, 915, 1061
BstBI TTCGAA 2 cut(s) 930, 1434
BstC8I GCNNGC 4 cut(s) 71, 910, 1106, 1302
BstDEI CTNAG 3 cut(s) 460, 736, 1283
BstF5I GGATG 2 cut(s) 765, 1371
BstFNI CGCG 1 cut(s) 725
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 7 cut(s) 285, 744, 753, 808, 816, 1161, 1319
BstMAI GTCTC 4 cut(s) 105, 133, 240, 672
BstMBI GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
BstMCI CGRYCG 1 cut(s) 1147
BstMWI GCNNNNNNNGC 3 cut(s) 499, 1262, 1301
BstNI CCWGG 2 cut(s) 924, 945
BstNSI RCATGY 1 cut(s) 999
BstPAI GACNNNNGTC 1 cut(s) 1215
BstSCI CCNGG 7 cut(s) 166, 506, 549, 550, 922, 943, 1146
BstSFI CTRYAG 1 cut(s) 596
BstSLI GKGCMC 2 cut(s) 183, 657
BstUI CGCG 1 cut(s) 725
BstV2I GAAGAC 1 cut(s) 714
BstX2I RGATCY 1 cut(s) 1316
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 1 cut(s) 1316
Bsu15I ATCGAT 1 cut(s) 281
BsuI GTATCC 2 cut(s) 385, 1578
BsuRI GGCC 3 cut(s) 300, 642, 1638
BsuTUI ATCGAT 1 cut(s) 281
BtsCI GGATG 2 cut(s) 765, 1371
BtsI GCAGTG 1 cut(s) 467
BtsIMutI CAGTG 2 cut(s) 467, 866
Cac8I GCNNGC 4 cut(s) 71, 910, 1106, 1302
CciI TCATGA 1 cut(s) 1017
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 2 cut(s) 498, 1445
Cfr13I GGNCC 5 cut(s) 319, 339, 504, 641, 866
Cfr9I CCCGGG 1 cut(s) 550
ClaI ATCGAT 1 cut(s) 281
CpoI CGGWCCG 1 cut(s) 504
CseI GACGC 2 cut(s) 92, 1250
Csp6I GTAC 2 cut(s) 567, 669
CspAI ACCGGT 1 cut(s) 1445
CspI CGGWCCG 1 cut(s) 504
CviAII CATG 6 cut(s) 311, 996, 1018, 1069, 1173, 1195
CviQI GTAC 2 cut(s) 567, 669
DdeI CTNAG 3 cut(s) 460, 736, 1283
DpnI GATC 7 cut(s) 284, 743, 752, 807, 815, 1160, 1318
DpnII GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
DrdI GACNNNNNNGTC 3 cut(s) 125, 254, 864
DriI GACNNNNNGTC 1 cut(s) 685
DseDI GACNNNNNNGTC 3 cut(s) 125, 254, 864
EaeI YGGCCR 1 cut(s) 1636
Eam1104I CTCTTC 4 cut(s) 47, 364, 1080, 1644
Eam1105I GACNNNNNGTC 1 cut(s) 685
EarI CTCTTC 4 cut(s) 47, 364, 1080, 1644
Eco130I CCWWGG 3 cut(s) 644, 891, 1639
Eco147I AGGCCT 1 cut(s) 300
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 4 cut(s) 319, 339, 504, 866
Eco57I CTGAAG 1 cut(s) 145
Eco72I CACGTG 3 cut(s) 798, 915, 1061
Eco88I CYCGRG 1 cut(s) 550
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 2 cut(s) 922, 943
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 3 cut(s) 644, 891, 1639
ErhI CCWWGG 3 cut(s) 644, 891, 1639
Esp3I CGTCTC 1 cut(s) 105
FaeI CATG 6 cut(s) 314, 999, 1021, 1072, 1176, 1198
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 2 cut(s) 87, 1196
FatI CATG 6 cut(s) 310, 995, 1017, 1068, 1172, 1194
FauI CCCGC 1 cut(s) 627
FblI GTMKAC 2 cut(s) 1052, 1239
Fnu4HI GCNGC 1 cut(s) 640
FokI GGATG 2 cut(s) 772, 1378
Fsp4HI GCNGC 1 cut(s) 640
FspBI CTAG 2 cut(s) 60, 152
FspI TGCGCA 1 cut(s) 611
GlaI GCGC 1 cut(s) 611
GluI GCNGC 1 cut(s) 640
GsaI CCCAGC 2 cut(s) 890, 1422
GsuI CTGGAG 2 cut(s) 213, 696
HaeIII GGCC 3 cut(s) 300, 642, 1638
HapII CCGG 7 cut(s) 168, 499, 507, 551, 1043, 1147, 1446
HgaI GACGC 2 cut(s) 92, 1250
HhaI GCGC 1 cut(s) 612
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 6 cut(s) 314, 999, 1021, 1072, 1176, 1198
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 3 cut(s) 700, 1240, 1425
HindII GTYRAC 3 cut(s) 700, 1240, 1425
HindIII AAGCTT 1 cut(s) 383
HinfI GANTC 9 cut(s) 211, 263, 734, 773, 848, 932, 952, 1046, 1236
HpaII CCGG 7 cut(s) 168, 499, 507, 551, 1043, 1147, 1446
HphI GGTGA 5 cut(s) 302, 354, 775, 933, 971
Hpy166II GTNNAC 6 cut(s) 700, 795, 1053, 1066, 1240, 1425
Hpy188I TCNGA 4 cut(s) 110, 463, 739, 1483
Hpy188III TCNNGA 7 cut(s) 28, 215, 777, 1018, 1132, 1220, 1460
Hpy8I GTNNAC 6 cut(s) 700, 795, 1053, 1066, 1240, 1425
Hpy99I CGWCG 3 cut(s) 122, 1214, 1244
HpyAV CCTTC 7 cut(s) 56, 437, 730, 796, 1015, 1285, 1550
HpyCH4III ACNGT 6 cut(s) 101, 290, 861, 881, 1327, 1510
HpyCH4IV ACGT 7 cut(s) 120, 348, 569, 797, 914, 1060, 1212
HpyCH4V TGCA 8 cut(s) 149, 598, 912, 972, 1092, 1122, 1265, 1678
HpyF10VI GCNNNNNNNGC 3 cut(s) 499, 1262, 1301
HpyF3I CTNAG 3 cut(s) 460, 736, 1283
HpySE526I ACGT 7 cut(s) 120, 348, 569, 797, 914, 1060, 1212
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 6 cut(s) 314, 999, 1021, 1072, 1176, 1198
HspAI GCGC 1 cut(s) 610
KpnI GGTACC 1 cut(s) 672
Kzo9I GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
MaeI CTAG 2 cut(s) 60, 152
MaeII ACGT 7 cut(s) 120, 348, 569, 797, 914, 1060, 1212
MaeIII GTNAC 5 cut(s) 349, 881, 939, 1321, 1485
MalI GATC 7 cut(s) 284, 743, 752, 807, 815, 1160, 1318
MbiI CCGCTC 1 cut(s) 666
MboI GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
MflI RGATCY 1 cut(s) 1316
MhlI GDGCHC 3 cut(s) 183, 657, 1076
MlsI TGGCCA 1 cut(s) 1638
MluCI AATT 4 cut(s) 370, 818, 1305, 1528
MluNI TGGCCA 1 cut(s) 1638
MlyI GAGTC 5 cut(s) 257, 728, 961, 1040, 1245
MmeI TCCRAC 1 cut(s) 492
MnlI CCTC 9 cut(s) 67, 290, 342, 469, 487, 955, 1000, 1191, 1553
Mox20I TGGCCA 1 cut(s) 1638
MroXI GAANNNNTTC 1 cut(s) 1668
MscI TGGCCA 1 cut(s) 1638
MseI TTAA 3 cut(s) 90, 1656, 1703
MslI CAYNNNNRTG 2 cut(s) 758, 1022
Msp20I TGGCCA 1 cut(s) 1638
MspA1I CMGCKG 1 cut(s) 674
MspCI CTTAAG 1 cut(s) 89
MspI CCGG 7 cut(s) 168, 499, 507, 551, 1043, 1147, 1446
MspR9I CCNGG 7 cut(s) 168, 508, 551, 552, 924, 945, 1148
MvaI CCWGG 2 cut(s) 924, 945
MvnI CGCG 1 cut(s) 725
MwoI GCNNNNNNNGC 3 cut(s) 499, 1262, 1301
NciI CCSGG 5 cut(s) 168, 508, 551, 552, 1148
NdeII GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
NlaIII CATG 6 cut(s) 314, 999, 1021, 1072, 1176, 1198
NlaIV GGNNCC 4 cut(s) 182, 321, 670, 1026
NmeAIII GCCGAG 1 cut(s) 1053
NmuCI GTSAC 2 cut(s) 881, 939
NsbI TGCGCA 1 cut(s) 611
NspI RCATGY 1 cut(s) 999
NspV TTCGAA 2 cut(s) 930, 1434
PagI TCATGA 1 cut(s) 1017
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 1 cut(s) 995
PdmI GAANNNNTTC 1 cut(s) 1668
PfeI GAWTC 4 cut(s) 211, 773, 848, 932
PflMI CCANNNNNTGG 1 cut(s) 231
PinAI ACCGGT 1 cut(s) 1445
PkrI GCNGC 1 cut(s) 641
PleI GAGTC 5 cut(s) 257, 728, 960, 1040, 1244
PmaCI CACGTG 3 cut(s) 798, 915, 1061
PmlI CACGTG 3 cut(s) 798, 915, 1061
PpsI GAGTC 5 cut(s) 257, 728, 960, 1040, 1244
Ppu21I YACGTR 4 cut(s) 570, 798, 915, 1061
PpuMI RGGWCCY 1 cut(s) 319
PscI ACATGT 1 cut(s) 995
PshAI GACNNNNGTC 1 cut(s) 1215
PsiI TTATAA 1 cut(s) 1578
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 922, 943
PspCI CACGTG 3 cut(s) 798, 915, 1061
PspFI CCCAGC 2 cut(s) 886, 1418
PspGI CCWGG 2 cut(s) 922, 943
PspN4I GGNNCC 4 cut(s) 182, 321, 670, 1026
PspPI GGNCC 5 cut(s) 319, 339, 504, 641, 866
PspPPI RGGWCCY 1 cut(s) 319
PstI CTGCAG 1 cut(s) 600
PsuI RGATCY 1 cut(s) 1316
RsaI GTAC 2 cut(s) 568, 670
RsaNI GTAC 2 cut(s) 567, 669
RseI CAYNNNNRTG 2 cut(s) 758, 1022
Rsr2I CGGWCCG 1 cut(s) 504
RsrII CGGWCCG 1 cut(s) 504
SalI GTCGAC 1 cut(s) 1238
SaqAI TTAA 3 cut(s) 90, 1656, 1703
SatI GCNGC 1 cut(s) 640
Sau3AI GATC 7 cut(s) 282, 741, 750, 805, 813, 1158, 1316
Sau96I GGNCC 5 cut(s) 319, 339, 504, 641, 866
SchI GAGTC 5 cut(s) 257, 728, 961, 1040, 1245
ScrFI CCNGG 7 cut(s) 168, 508, 551, 552, 924, 945, 1148
SduI GDGCHC 3 cut(s) 183, 657, 1076
SfcI CTRYAG 1 cut(s) 596
SfuI TTCGAA 2 cut(s) 930, 1434
SinI GGWCC 4 cut(s) 319, 339, 504, 866
SmaI CCCGGG 1 cut(s) 552
SmiMI CAYNNNNRTG 2 cut(s) 758, 1022
SmlI CTYRAG 2 cut(s) 89, 413
SmoI CTYRAG 2 cut(s) 89, 413
Sse9I AATT 4 cut(s) 370, 818, 1305, 1528
SseBI AGGCCT 1 cut(s) 300
SspI AATATT 1 cut(s) 1400
SspMI CTAG 2 cut(s) 60, 152
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 7 cut(s) 166, 506, 549, 550, 922, 943, 1146
StyI CCWWGG 3 cut(s) 644, 891, 1639
TaaI ACNGT 6 cut(s) 101, 290, 861, 881, 1327, 1510
TaiI ACGT 7 cut(s) 123, 351, 572, 800, 917, 1063, 1215
TaqI TCGA 7 cut(s) 15, 281, 930, 1234, 1239, 1434, 1672
TasI AATT 4 cut(s) 370, 818, 1305, 1528
TauI GCSGC 1 cut(s) 642
TfiI GAWTC 4 cut(s) 211, 773, 848, 932
Tru1I TTAA 3 cut(s) 90, 1656, 1703
Tru9I TTAA 3 cut(s) 90, 1656, 1703
TscAI CASTG 2 cut(s) 474, 866
TseFI GTSAC 2 cut(s) 881, 939
Tsp45I GTSAC 2 cut(s) 881, 939
TspGWI ACGGA 1 cut(s) 870
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 2 cut(s) 474, 866
Van91I CCANNNNNTGG 1 cut(s) 231
Vha464I CTTAAG 1 cut(s) 89
VpaK11BI GGWCC 4 cut(s) 319, 339, 504, 866
XapI RAATTY 1 cut(s) 818
XceI RCATGY 1 cut(s) 999
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 2 cut(s) 1052, 1239
XmnI GAANNNNTTC 1 cut(s) 1668
XspI CTAG 2 cut(s) 60, 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.