Rw5G022380

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000099
Physical Location & Seq
Reverse (-)
30749129 .. 30759519
10391 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G022380.1

Sequence Viewer

Length: 2487 bp
ATGAGTTCCAGTATCGAAGCGTTTAGCCAGATATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTCCCCTTGACGCCCTTACGCTAGACCGTCCCATCAGAGTCGACGGCGACGTTTTAGTCTCTAGCAACCAAATCTTTGTACTAGGGTTCTTCAGCCCCGGAAATTCTGGGGACCACTACGCTGGAGTTTGGTATAACAAGATTCCAGAGAAAACCGTTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAACGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAACTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCAAACAATTTCACAGCGAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTCCCTCTATGAAGATTGGGCTGAACCGGCGCTCAGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCTGGAACCGGGAGTTGTACATGTGGGATAAACCCGATGGGGGTTCTGCAGTTGTTTCTGCGCAAGGGTAGAGAAGCATTGTGGCGGTGCGGCCCTTGGACTGGGCACAGATTGAGCGGTACCGCTGGAGACTACAAGTCAAGAATTGTCAACAATGAAGACGAGATATCCTTCGCGTATTTGGACTCAGAGATCACAGAGATCACAAGGATCGTGATAGATGAATCAGGAATACTTCAAGGGTTCACGTGGAAGGATCAATGGATCAAATTCTACTCCTACCCGACTGGGTGGTGTGATTCCTACGGACAGTGCGGTCCAAATACTAACTGTGACCCAGCCAAGGATTATAAGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTAGATCGAGTCTTGGTGAGGGTGGATGCATTAGGAAAGCGGAAGCCTCCACATGTCAAAATGGAGAAGGCTTCGTGAAGGTGGCGAGTGTAAAACTACCGGACTCGTCTACGGCACGTGTGAACATGAGCACGAGTTTGGAAGAGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACATCATACACGAGTGCGGACGACCGGGACGGTGGGATCGGGTGCTTGACATGGCACGGGGACTTGATGGACATGAGGACTTTCGCCGATGTTGGTCAAGATTTATATGTTCGAGTCGATGCAACTTTTTTAGCTCAATATGCAGAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATCCATTTGAACTTACTGCTGGGTTAACCTACTTCGAAGAAGCTACTGGTGGATTAGCTCTTGATGATAGTAGAATAAACTCAGAGTTACTATTATTTCATCTAAACACCGTAGCCACAGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAAGGAAATAGCTGTAAAAAGATTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGAAGAAGAGAAGATTCTAATATATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAACCAAGAAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGGCTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCTAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAACACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGAAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCATAAAGAATGCTGGTTCCTATGAGAAGCATCCATATTTAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCTGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCAAATGACCGGCCAACCATGTCGGCAGTCGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCGAGACGACCCACACTTTTACTGACGACAATGAGTCCTAGTGGAGACCCATCCAGCAACAAAGGAGGTAGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

828

Amino Acids

91.59

Weight (kDa)

5.92

Isoelectric Point (pI)

44.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 180 3.5e-34 D-mannose binding lectin
S_locus_glycop PF00954 212 - 314 4.9e-18 S-locus glycoprotein domain
PAN_2 PF08276 334 - 400 9.7e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 513 - 782 1.3e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 778 1.4e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 903, 1581
AasI GACNNNNNNGTC 3 cut(s) 128, 257, 867
Acc16I TGCGCA 1 cut(s) 614
Acc65I GGTACC 1 cut(s) 671
AccB1I GGYRCC 1 cut(s) 671
AccBSI CCGCTC 1 cut(s) 669
AccI GTMKAC 2 cut(s) 114, 1055
AccII CGCG 1 cut(s) 728
AciI CCGC 8 cut(s) 345, 637, 642, 669, 675, 867, 986, 1142
AclI AACGTT 1 cut(s) 351
AclWI GGATC 5 cut(s) 770, 816, 824, 1169, 1327
AcoI YGGCCR 2 cut(s) 1639, 2318
AcsI RAATTY 4 cut(s) 175, 821, 2170, 2303
AcuI CTGAAG 2 cut(s) 148, 2022
AcvI CACGTG 3 cut(s) 801, 918, 1064
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 4 cut(s) 153, 571, 673, 2467
AfiI CCNNNNNNNGG 7 cut(s) 234, 339, 560, 592, 653, 895, 1356
AflIII ACRYGT 5 cut(s) 572, 998, 1063, 2182, 2462
AhdI GACNNNNNGTC 2 cut(s) 688, 2406
AjnI CCWGG 2 cut(s) 553, 925
AjuI GAANNNNNNNTTGG 4 cut(s) 1536, 1551, 1568, 1583
AleI CACNNNNGTG 1 cut(s) 2290
Alw21I GWGCWC 2 cut(s) 1079, 1813
Alw26I GTCTC 5 cut(s) 136, 243, 675, 2371, 2412
AlwI GGATC 5 cut(s) 770, 816, 824, 1169, 1327
AoxI GGCC 4 cut(s) 301, 643, 1639, 2318
ApeKI GCWGC 1 cut(s) 2360
ApoI RAATTY 4 cut(s) 175, 821, 2170, 2303
Asp700I GAANNNNTTC 1 cut(s) 1671
Asp718I GGTACC 1 cut(s) 671
AspLEI GCGC 2 cut(s) 507, 615
AspS9I GGNCC 5 cut(s) 184, 322, 342, 644, 869
AsuC2I CCSGG 3 cut(s) 171, 562, 1151
AsuHPI GGTGA 7 cut(s) 305, 357, 936, 974, 2037, 2252, 2364
AsuII TTCGAA 2 cut(s) 933, 1437
AsuNHI GCTAGC 1 cut(s) 1919
AvaII GGWCC 4 cut(s) 184, 322, 342, 869
BaeGI GKGCMC 1 cut(s) 660
BalI TGGCCA 1 cut(s) 1641
BanI GGYRCC 1 cut(s) 671
BauI CACGAG 2 cut(s) 1078, 1135
BbrPI CACGTG 3 cut(s) 801, 918, 1064
BbsI GAAGAC 1 cut(s) 717
Bbv12I GWGCWC 2 cut(s) 1079, 1813
BbvI GCAGC 1 cut(s) 2372
BccI CCATC 7 cut(s) 113, 290, 583, 1105, 1186, 1592, 2431
BceAI ACGGC 2 cut(s) 133, 1074
BcgI CGANNNNNNTGC 2 cut(s) 2263, 2297
BciT130I CCWGG 2 cut(s) 555, 927
BciVI GTATCC 2 cut(s) 388, 1581
BcnI CCSGG 3 cut(s) 171, 562, 1151
BcoDI GTCTC 5 cut(s) 136, 243, 675, 2371, 2412
BfmI CTRYAG 2 cut(s) 599, 2235
BfoI RGCGCY 1 cut(s) 508
BfuI GTATCC 2 cut(s) 388, 1581
BglII AGATCT 1 cut(s) 1909
BisI GCNGC 2 cut(s) 643, 2361
BlsI GCNGC 2 cut(s) 644, 2362
Bme1390I CCNGG 5 cut(s) 171, 555, 562, 927, 1151
Bme18I GGWCC 4 cut(s) 184, 322, 342, 869
BmeRI GACNNNNNGTC 2 cut(s) 688, 2406
BmgT120I GGNCC 5 cut(s) 184, 322, 342, 644, 869
BmiI GGNNCC 6 cut(s) 185, 324, 559, 673, 1573, 2146
BmrFI CCNGG 5 cut(s) 171, 555, 562, 927, 1151
BmrI ACTGGG 3 cut(s) 251, 663, 849
BmsI GCATC 4 cut(s) 962, 1234, 2167, 2347
BmtI GCTAGC 1 cut(s) 1923
BmuI ACTGGG 3 cut(s) 251, 663, 849
BpiI GAAGAC 1 cut(s) 717
BpmI CTGGAG 2 cut(s) 216, 699
Bpu10I CCTNAGC 1 cut(s) 508
Bpu14I TTCGAA 2 cut(s) 933, 1437
BpuEI CTTGAG 1 cut(s) 437
BpuMI CCSGG 3 cut(s) 171, 562, 1151
Bsa29I ATCGAT 1 cut(s) 284
BsaAI YACGTR 3 cut(s) 801, 918, 1064
BsaHI GRCGYC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 2412
BsaJI CCNNGG 6 cut(s) 169, 553, 647, 894, 926, 1642
BsaWI WCCGGW 1 cut(s) 1045
BsaXI ACNNNNNCTCC 4 cut(s) 291, 321, 1520, 1550
Bsc4I CCNNNNNNNGG 7 cut(s) 234, 339, 560, 592, 653, 895, 1356
Bse118I RCCGGY 2 cut(s) 501, 2316
Bse1I ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
Bse3DI GCAATG 2 cut(s) 1930, 2064
BseBI CCWGG 2 cut(s) 555, 927
BseCI ATCGAT 1 cut(s) 284
BseDI CCNNGG 6 cut(s) 169, 553, 647, 894, 926, 1642
BseGI GGATG 4 cut(s) 977, 1374, 2158, 2423
BseLI CCNNNNNNNGG 7 cut(s) 234, 339, 560, 592, 653, 895, 1356
BseMI GCAATG 2 cut(s) 1930, 2064
BseMII CTCAG 4 cut(s) 477, 522, 753, 1497
BseNI ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
BseSI GKGCMC 1 cut(s) 660
BseXI GCAGC 1 cut(s) 2372
BseYI CCCAGC 2 cut(s) 889, 1421
Bsh1236I CGCG 1 cut(s) 728
Bsh1285I CGRYCG 1 cut(s) 1150
BshFI GGCC 4 cut(s) 303, 645, 1641, 2320
BshNI GGYRCC 1 cut(s) 671
BshVI ATCGAT 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 1150
BsiHKAI GWGCWC 2 cut(s) 1079, 1813
BsiSI CCGG 6 cut(s) 171, 502, 561, 1046, 1150, 2317
BslFI GGGAC 4 cut(s) 87, 197, 1166, 1199
BslI CCNNNNNNNGG 7 cut(s) 234, 339, 560, 592, 653, 895, 1356
BsmAI GTCTC 5 cut(s) 136, 243, 675, 2371, 2412
BsmBI CGTCTC 1 cut(s) 2371
BsmFI GGGAC 4 cut(s) 87, 197, 1166, 1199
BsmI GAATGC 2 cut(s) 2143, 2274
BsnI GGCC 4 cut(s) 303, 645, 1641, 2320
Bso31I GGTCTC 1 cut(s) 2412
Bsp119I TTCGAA 2 cut(s) 933, 1437
Bsp1286I GDGCHC 3 cut(s) 660, 1079, 1813
Bsp1407I TGTACA 2 cut(s) 569, 2465
BspACI CCGC 8 cut(s) 345, 637, 642, 669, 675, 867, 986, 1142
BspANI GGCC 4 cut(s) 303, 645, 1641, 2320
BspCNI CTCAG 4 cut(s) 476, 521, 752, 1496
BspDI ATCGAT 1 cut(s) 284
BspFNI CGCG 1 cut(s) 728
BspHI TCATGA 1 cut(s) 1876
BspLI GGNNCC 6 cut(s) 185, 324, 559, 673, 1573, 2146
BspMAI CTGCAG 1 cut(s) 603
BspOI GCTAGC 1 cut(s) 1923
BspPI GGATC 5 cut(s) 770, 816, 824, 1169, 1327
BspQI GCTCTTC 2 cut(s) 1801, 2370
BspT104I TTCGAA 2 cut(s) 933, 1437
BspT107I GGYRCC 1 cut(s) 671
BspTNI GGTCTC 1 cut(s) 2412
BsrBI CCGCTC 1 cut(s) 669
BsrDI GCAATG 2 cut(s) 1930, 2064
BsrFI RCCGGY 2 cut(s) 501, 2316
BsrGI TGTACA 2 cut(s) 569, 2465
BsrI ACTGG 6 cut(s) 9, 257, 658, 844, 1453, 2131
BssAI RCCGGY 2 cut(s) 501, 2316
BssECI CCNNGG 6 cut(s) 169, 553, 647, 894, 926, 1642
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 2 cut(s) 1078, 1135
BssT1I CCWWGG 3 cut(s) 647, 894, 1642
Bst2BI CACGAG 2 cut(s) 1078, 1135
Bst2UI CCWGG 2 cut(s) 555, 927
Bst4CI ACNGT 9 cut(s) 101, 229, 293, 864, 884, 1157, 1330, 1513, 2070
Bst6I CTCTTC 7 cut(s) 47, 367, 1083, 1647, 1731, 1801, 2370
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 2 cut(s) 569, 2465
BstBAI YACGTR 3 cut(s) 801, 918, 1064
BstBI TTCGAA 2 cut(s) 933, 1437
BstC8I GCNNGC 5 cut(s) 71, 913, 1305, 1921, 2482
BstDEI CTNAG 6 cut(s) 463, 508, 739, 1286, 1483, 1892
BstF5I GGATG 4 cut(s) 977, 1374, 2158, 2423
BstFNI CGCG 1 cut(s) 728
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 507, 615
BstMAI GTCTC 5 cut(s) 136, 243, 675, 2371, 2412
BstMCI CGRYCG 1 cut(s) 1150
BstMWI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
BstNI CCWGG 2 cut(s) 555, 927
BstNSI RCATGY 4 cut(s) 576, 1002, 2186, 2466
BstSCI CCNGG 5 cut(s) 169, 553, 560, 925, 1149
BstSFI CTRYAG 2 cut(s) 599, 2235
BstSLI GKGCMC 1 cut(s) 660
BstUI CGCG 1 cut(s) 728
BstV1I GCAGC 1 cut(s) 2372
BstV2I GAAGAC 1 cut(s) 717
BstX2I RGATCY 2 cut(s) 1319, 1909
BstXI CCANNNNNNTGG 1 cut(s) 194
BstYI RGATCY 2 cut(s) 1319, 1909
Bsu15I ATCGAT 1 cut(s) 284
BsuI GTATCC 2 cut(s) 388, 1581
BsuRI GGCC 4 cut(s) 303, 645, 1641, 2320
BsuTUI ATCGAT 1 cut(s) 284
BtsCI GGATG 4 cut(s) 977, 1374, 2158, 2423
BtsI GCAGTG 1 cut(s) 470
BtsIMutI CAGTG 2 cut(s) 470, 869
Cac8I GCNNGC 5 cut(s) 71, 913, 1305, 1921, 2482
CciI TCATGA 1 cut(s) 1876
CfoI GCGC 2 cut(s) 507, 615
Cfr10I RCCGGY 2 cut(s) 501, 2316
Cfr13I GGNCC 5 cut(s) 184, 322, 342, 644, 869
ClaI ATCGAT 1 cut(s) 284
CseI GACGC 2 cut(s) 92, 1839
Csp6I GTAC 4 cut(s) 152, 570, 672, 2466
CspCI CAANNNNNGTGG 2 cut(s) 2001, 2036
CviQI GTAC 4 cut(s) 152, 570, 672, 2466
DdeI CTNAG 6 cut(s) 463, 508, 739, 1286, 1483, 1892
DraI TTTAAA 1 cut(s) 2169
DrdI GACNNNNNNGTC 3 cut(s) 128, 257, 867
DriI GACNNNNNGTC 2 cut(s) 688, 2406
DseDI GACNNNNNNGTC 3 cut(s) 128, 257, 867
EaeI YGGCCR 2 cut(s) 1639, 2318
Eam1104I CTCTTC 7 cut(s) 47, 367, 1083, 1647, 1731, 1801, 2370
Eam1105I GACNNNNNGTC 2 cut(s) 688, 2406
EarI CTCTTC 7 cut(s) 47, 367, 1083, 1647, 1731, 1801, 2370
Eco130I CCWWGG 3 cut(s) 647, 894, 1642
Eco147I AGGCCT 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 2412
Eco32I GATATC 1 cut(s) 720
Eco47I GGWCC 4 cut(s) 184, 322, 342, 869
Eco57I CTGAAG 2 cut(s) 148, 2022
Eco72I CACGTG 3 cut(s) 801, 918, 1064
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 2 cut(s) 553, 925
EcoRV GATATC 1 cut(s) 720
EcoT14I CCWWGG 3 cut(s) 647, 894, 1642
EcoT22I ATGCAT 1 cut(s) 977
ErhI CCWWGG 3 cut(s) 647, 894, 1642
Esp3I CGTCTC 1 cut(s) 2371
FaqI GGGAC 4 cut(s) 87, 197, 1166, 1199
FauNDI CATATG 1 cut(s) 2032
FblI GTMKAC 2 cut(s) 114, 1055
Fnu4HI GCNGC 2 cut(s) 643, 2361
FokI GGATG 4 cut(s) 984, 1381, 2145, 2410
Fsp4HI GCNGC 2 cut(s) 643, 2361
FspI TGCGCA 1 cut(s) 614
GlaI GCGC 2 cut(s) 506, 614
GluI GCNGC 2 cut(s) 643, 2361
GsaI CCCAGC 2 cut(s) 893, 1425
GsuI CTGGAG 2 cut(s) 216, 699
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 4 cut(s) 303, 645, 1641, 2320
HapII CCGG 6 cut(s) 171, 502, 561, 1046, 1150, 2317
HgaI GACGC 2 cut(s) 92, 1839
HhaI GCGC 2 cut(s) 507, 615
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 2 cut(s) 505, 613
HinP1I GCGC 2 cut(s) 505, 613
HincII GTYRAC 3 cut(s) 115, 703, 1428
HindII GTYRAC 3 cut(s) 115, 703, 1428
HindIII AAGCTT 2 cut(s) 386, 1550
HpaI GTTAAC 1 cut(s) 1428
HpaII CCGG 6 cut(s) 171, 502, 561, 1046, 1150, 2317
HphI GGTGA 7 cut(s) 305, 357, 936, 974, 2037, 2252, 2364
Hpy166II GTNNAC 6 cut(s) 115, 703, 798, 1056, 1069, 1428
Hpy188I TCNGA 6 cut(s) 110, 466, 742, 1486, 1677, 2086
Hpy8I GTNNAC 6 cut(s) 115, 703, 798, 1056, 1069, 1428
Hpy99I CGWCG 2 cut(s) 119, 125
HpyCH4III ACNGT 9 cut(s) 101, 229, 293, 864, 884, 1157, 1330, 1513, 2070
HpyCH4IV ACGT 5 cut(s) 123, 351, 800, 917, 1063
HpyF10VI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
HpyF3I CTNAG 6 cut(s) 463, 508, 739, 1286, 1483, 1892
HpySE526I ACGT 5 cut(s) 123, 351, 800, 917, 1063
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 2 cut(s) 505, 613
KpnI GGTACC 1 cut(s) 675
KspAI GTTAAC 1 cut(s) 1428
LguI GCTCTTC 2 cut(s) 1801, 2370
LmnI GCTCC 2 cut(s) 1577, 1993
Lsp1109I GCAGC 1 cut(s) 2372
LweI GCATC 4 cut(s) 962, 1234, 2167, 2347
MaeII ACGT 5 cut(s) 123, 351, 800, 917, 1063
MaeIII GTNAC 6 cut(s) 352, 884, 1324, 1488, 2043, 2458
MbiI CCGCTC 1 cut(s) 669
MfeI CAATTG 1 cut(s) 2469
MflI RGATCY 2 cut(s) 1319, 1909
MhlI GDGCHC 3 cut(s) 660, 1079, 1813
MlsI TGGCCA 1 cut(s) 1641
MluNI TGGCCA 1 cut(s) 1641
MlyI GAGTC 8 cut(s) 120, 731, 964, 1043, 1248, 1280, 1775, 2416
MmeI TCCRAC 4 cut(s) 495, 1714, 1802, 2005
Mox20I TGGCCA 1 cut(s) 1641
Mph1103I ATGCAT 1 cut(s) 977
MroXI GAANNNNTTC 1 cut(s) 1671
MscI TGGCCA 1 cut(s) 1641
MseI TTAA 7 cut(s) 1427, 1659, 1707, 1794, 1817, 2168, 2348
MslI CAYNNNNRTG 1 cut(s) 2290
Msp20I TGGCCA 1 cut(s) 1641
MspA1I CMGCKG 1 cut(s) 677
MspI CCGG 6 cut(s) 171, 502, 561, 1046, 1150, 2317
MspR9I CCNGG 5 cut(s) 171, 555, 562, 927, 1151
MunI CAATTG 1 cut(s) 2469
Mva1269I GAATGC 2 cut(s) 2143, 2274
MvaI CCWGG 2 cut(s) 555, 927
MvnI CGCG 1 cut(s) 728
MwoI GCNNNNNNNGC 3 cut(s) 502, 1265, 1304
NciI CCSGG 3 cut(s) 171, 562, 1151
NdeI CATATG 1 cut(s) 2032
NheI GCTAGC 1 cut(s) 1919
NlaIV GGNNCC 6 cut(s) 185, 324, 559, 673, 1573, 2146
NmuCI GTSAC 3 cut(s) 884, 2043, 2458
NsbI TGCGCA 1 cut(s) 614
NsiI ATGCAT 1 cut(s) 977
NspI RCATGY 4 cut(s) 576, 1002, 2186, 2466
NspV TTCGAA 2 cut(s) 933, 1437
OliI CACNNNNGTG 1 cut(s) 2290
PagI TCATGA 1 cut(s) 1876
PceI AGGCCT 1 cut(s) 303
PciI ACATGT 4 cut(s) 572, 998, 2182, 2462
PciSI GCTCTTC 2 cut(s) 1801, 2370
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 2 cut(s) 2143, 2274
PdmI GAANNNNTTC 1 cut(s) 1671
PfeI GAWTC 9 cut(s) 214, 266, 776, 851, 935, 1744, 1883, 2228, 2243
PkrI GCNGC 2 cut(s) 644, 2362
PleI GAGTC 8 cut(s) 119, 731, 963, 1043, 1247, 1279, 1775, 2415
PmaCI CACGTG 3 cut(s) 801, 918, 1064
PmlI CACGTG 3 cut(s) 801, 918, 1064
PpsI GAGTC 8 cut(s) 119, 731, 963, 1043, 1247, 1279, 1775, 2415
Ppu21I YACGTR 3 cut(s) 801, 918, 1064
PpuMI RGGWCCY 1 cut(s) 322
PscI ACATGT 4 cut(s) 572, 998, 2182, 2462
PsiI TTATAA 2 cut(s) 903, 1581
Psp1406I AACGTT 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 2 cut(s) 553, 925
PspCI CACGTG 3 cut(s) 801, 918, 1064
PspFI CCCAGC 2 cut(s) 889, 1421
PspGI CCWGG 2 cut(s) 553, 925
PspN4I GGNNCC 6 cut(s) 185, 324, 559, 673, 1573, 2146
PspPI GGNCC 5 cut(s) 184, 322, 342, 644, 869
PspPPI RGGWCCY 1 cut(s) 322
PstI CTGCAG 1 cut(s) 603
PsuI RGATCY 2 cut(s) 1319, 1909
RsaI GTAC 4 cut(s) 153, 571, 673, 2467
RsaNI GTAC 4 cut(s) 152, 570, 672, 2466
RseI CAYNNNNRTG 1 cut(s) 2290
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 2 cut(s) 1801, 2370
SaqAI TTAA 7 cut(s) 1427, 1659, 1707, 1794, 1817, 2168, 2348
SatI GCNGC 2 cut(s) 643, 2361
Sau96I GGNCC 5 cut(s) 184, 322, 342, 644, 869
SchI GAGTC 8 cut(s) 120, 731, 964, 1043, 1248, 1280, 1775, 2416
ScrFI CCNGG 5 cut(s) 171, 555, 562, 927, 1151
SduI GDGCHC 3 cut(s) 660, 1079, 1813
SfaNI GCATC 4 cut(s) 962, 1234, 2167, 2347
SfcI CTRYAG 2 cut(s) 599, 2235
SfuI TTCGAA 2 cut(s) 933, 1437
SinI GGWCC 4 cut(s) 184, 322, 342, 869
SmiI ATTTAAAT 1 cut(s) 2169
SmiMI CAYNNNNRTG 1 cut(s) 2290
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
SseBI AGGCCT 1 cut(s) 303
SsiI CCGC 8 cut(s) 345, 637, 642, 669, 675, 867, 986, 1142
SspI AATATT 1 cut(s) 1983
StuI AGGCCT 1 cut(s) 303
StyD4I CCNGG 5 cut(s) 169, 553, 560, 925, 1149
StyI CCWWGG 3 cut(s) 647, 894, 1642
SwaI ATTTAAAT 1 cut(s) 2169
TaaI ACNGT 9 cut(s) 101, 229, 293, 864, 884, 1157, 1330, 1513, 2070
TaiI ACGT 5 cut(s) 126, 354, 803, 920, 1066
TaqI TCGA 9 cut(s) 15, 114, 284, 933, 953, 1237, 1242, 1437, 1836
TatI WGTACW 3 cut(s) 151, 569, 2465
TauI GCSGC 1 cut(s) 645
TfiI GAWTC 9 cut(s) 214, 266, 776, 851, 935, 1744, 1883, 2228, 2243
Tru1I TTAA 7 cut(s) 1427, 1659, 1707, 1794, 1817, 2168, 2348
Tru9I TTAA 7 cut(s) 1427, 1659, 1707, 1794, 1817, 2168, 2348
TscAI CASTG 2 cut(s) 477, 869
TseFI GTSAC 3 cut(s) 884, 2043, 2458
TseI GCWGC 1 cut(s) 2360
Tsp45I GTSAC 3 cut(s) 884, 2043, 2458
TspGWI ACGGA 2 cut(s) 873, 1564
TspRI CASTG 2 cut(s) 477, 869
VpaK11BI GGWCC 4 cut(s) 184, 322, 342, 869
XapI RAATTY 4 cut(s) 175, 821, 2170, 2303
XceI RCATGY 4 cut(s) 576, 1002, 2186, 2466
XmiI GTMKAC 2 cut(s) 114, 1055
XmnI GAANNNNTTC 1 cut(s) 1671
Zsp2I ATGCAT 1 cut(s) 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.