pycom02g22290

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
20432420 .. 20432779
360 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22290.1

Sequence Viewer

Length: 360 bp
ATGAATTCTACTAAATTCTTTTTTGTCATACTTAGATTGCTTATCTTCCTTGTGATTCCTCCCTCCTCCATTTCTGTTGCCCTAGACGCCATTACACCAAACCAACCCCTAAGATATGACGACGTTCTTCTCTCCGCCACTAAAATCTTTGCACTAGGGTTTTTTAGCCCAGGCAATTCACATAACCGTTACATCGGAGTTTGGTACAACAATATTCCAATCCAAACAATCGTCTGGATTGCAAACAGAGACAACCCCATAACTCCAATTGCTGGAACTGGGCTCCTAGCTATTCATGGAGATCGATGGAGGCCTTGTCATTTATGGGAAGGACCAAAATACCGCTCTTTGGTCTGCTAA

Protein Analysis

120

Amino Acids

13.47

Weight (kDa)

9.44

Isoelectric Point (pI)

38.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 272
AccBSI CCGCTC 1 cut(s) 345
AciI CCGC 2 cut(s) 135, 343
AcsI RAATTY 2 cut(s) 4, 14
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 1 cut(s) 206
AfiI CCNNNNNNNGG 2 cut(s) 272, 349
AjnI CCWGG 1 cut(s) 169
AluBI AGCT 1 cut(s) 290
AluI AGCT 1 cut(s) 290
Alw26I GTCTC 1 cut(s) 243
AoxI GGCC 1 cut(s) 311
ApoI RAATTY 2 cut(s) 4, 14
AspS9I GGNCC 1 cut(s) 332
AvaII GGWCC 1 cut(s) 332
BanII GRGCYC 1 cut(s) 285
BccI CCATC 1 cut(s) 300
BciT130I CCWGG 1 cut(s) 171
BcoDI GTCTC 1 cut(s) 243
BfaI CTAG 3 cut(s) 83, 155, 287
Bme1390I CCNGG 1 cut(s) 171
Bme18I GGWCC 1 cut(s) 332
BmgT120I GGNCC 1 cut(s) 332
BmiI GGNNCC 1 cut(s) 284
BmrFI CCNGG 1 cut(s) 171
BmrI ACTGGG 1 cut(s) 288
BmuI ACTGGG 1 cut(s) 288
Bsa29I ATCGAT 1 cut(s) 304
BsaHI GRCGYC 1 cut(s) 87
BsaJI CCNNGG 1 cut(s) 169
BsaXI ACNNNNNCTCC 2 cut(s) 301, 331
Bsc4I CCNNNNNNNGG 2 cut(s) 272, 349
Bse1I ACTGG 1 cut(s) 283
BseBI CCWGG 1 cut(s) 171
BseCI ATCGAT 1 cut(s) 304
BseDI CCNNGG 1 cut(s) 169
BseLI CCNNNNNNNGG 2 cut(s) 272, 349
BseNI ACTGG 1 cut(s) 283
BseRI GAGGAG 1 cut(s) 55
BshFI GGCC 1 cut(s) 313
BshVI ATCGAT 1 cut(s) 304
BslI CCNNNNNNNGG 2 cut(s) 272, 349
BsmAI GTCTC 1 cut(s) 243
BsnI GGCC 1 cut(s) 313
Bsp1286I GDGCHC 1 cut(s) 285
Bsp143I GATC 1 cut(s) 301
BspACI CCGC 2 cut(s) 135, 343
BspANI GGCC 1 cut(s) 313
BspDI ATCGAT 1 cut(s) 304
BspLI GGNNCC 1 cut(s) 284
BsrBI CCGCTC 1 cut(s) 345
BsrI ACTGG 1 cut(s) 283
BssECI CCNNGG 1 cut(s) 169
BssMI GATC 1 cut(s) 301
BssNI GRCGYC 1 cut(s) 87
Bst2UI CCWGG 1 cut(s) 171
Bst4CI ACNGT 1 cut(s) 188
BstACI GRCGYC 1 cut(s) 87
BstDEI CTNAG 2 cut(s) 32, 110
BstKTI GATC 1 cut(s) 304
BstMAI GTCTC 1 cut(s) 243
BstMBI GATC 1 cut(s) 301
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstNI CCWGG 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 169
Bsu15I ATCGAT 1 cut(s) 304
BsuRI GGCC 1 cut(s) 313
BsuTUI ATCGAT 1 cut(s) 304
Cfr13I GGNCC 1 cut(s) 332
ClaI ATCGAT 1 cut(s) 304
CseI GACGC 1 cut(s) 95
Csp6I GTAC 1 cut(s) 205
CviAII CATG 1 cut(s) 296
CviJI RGCY 4 cut(s) 168, 283, 290, 313
CviKI_1 RGCY 4 cut(s) 168, 283, 290, 313
CviQI GTAC 1 cut(s) 205
DdeI CTNAG 2 cut(s) 32, 110
DpnI GATC 1 cut(s) 303
DpnII GATC 1 cut(s) 301
EciI GGCGGA 1 cut(s) 124
Eco147I AGGCCT 1 cut(s) 313
Eco24I GRGCYC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 332
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 169
EcoT38I GRGCYC 1 cut(s) 285
FaeI CATG 1 cut(s) 299
FaiI YATR 6 cut(s) 29, 117, 183, 260, 297, 325
FatI CATG 1 cut(s) 295
FriOI GRGCYC 1 cut(s) 285
FspBI CTAG 3 cut(s) 83, 155, 287
HaeIII GGCC 1 cut(s) 313
HgaI GACGC 1 cut(s) 95
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 1 cut(s) 299
HinfI GANTC 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 197
Hpy188III TCNNGA 1 cut(s) 235
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 1 cut(s) 323
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 2 cut(s) 152, 242
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpyF3I CTNAG 2 cut(s) 32, 110
HpySE526I ACGT 1 cut(s) 123
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 1 cut(s) 299
Kzo9I GATC 1 cut(s) 301
LmnI GCTCC 1 cut(s) 288
LpnPI CCDG 5 cut(s) 156, 183, 220, 258, 264
MaeI CTAG 3 cut(s) 83, 155, 287
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 188
MalI GATC 1 cut(s) 303
MbiI CCGCTC 1 cut(s) 345
MboI GATC 1 cut(s) 301
MboII GAAGA 2 cut(s) 37, 119
MfeI CAATTG 1 cut(s) 267
MhlI GDGCHC 1 cut(s) 285
MluCI AATT 4 cut(s) 4, 14, 175, 267
MnlI CCTC 4 cut(s) 69, 73, 76, 303
MspR9I CCNGG 1 cut(s) 171
MunI CAATTG 1 cut(s) 267
MvaI CCWGG 1 cut(s) 171
MwoI GCNNNNNNNGC 1 cut(s) 86
NdeII GATC 1 cut(s) 301
NlaIII CATG 1 cut(s) 299
NlaIV GGNNCC 1 cut(s) 284
PceI AGGCCT 1 cut(s) 313
PfeI GAWTC 1 cut(s) 55
PflMI CCANNNNNTGG 1 cut(s) 272
Psp6I CCWGG 1 cut(s) 169
PspGI CCWGG 1 cut(s) 169
PspN4I GGNNCC 1 cut(s) 284
PspPI GGNCC 1 cut(s) 332
RsaI GTAC 1 cut(s) 206
RsaNI GTAC 1 cut(s) 205
Sau3AI GATC 1 cut(s) 301
Sau96I GGNCC 1 cut(s) 332
ScrFI CCNGG 1 cut(s) 171
SduI GDGCHC 1 cut(s) 285
SetI ASST 2 cut(s) 126, 292
SinI GGWCC 1 cut(s) 332
Sse9I AATT 4 cut(s) 4, 14, 175, 267
SseBI AGGCCT 1 cut(s) 313
SsiI CCGC 2 cut(s) 135, 343
SspI AATATT 1 cut(s) 214
SspMI CTAG 3 cut(s) 83, 155, 287
StuI AGGCCT 1 cut(s) 313
StyD4I CCNGG 1 cut(s) 169
TaaI ACNGT 1 cut(s) 188
TaiI ACGT 1 cut(s) 126
TaqI TCGA 1 cut(s) 304
TasI AATT 4 cut(s) 4, 14, 175, 267
TfiI GAWTC 1 cut(s) 55
TspDTI ATGAA 2 cut(s) 17, 284
Van91I CCANNNNNTGG 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 332
XapI RAATTY 2 cut(s) 4, 14
XspI CTAG 3 cut(s) 83, 155, 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.