Rroxscaffold_2G00123920

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
57866823 .. 57869995
3173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00123920.1

Sequence Viewer

Length: 2181 bp
ATGATTTCTATTCAATGGTCTATGATCACTGCATTGCTCATCTTCCTGCTTTTTTATCTCCCCTCTTGCATCTCCATTGATTCCATTACTCCGAACCAAACCATCAAAGACGGCGACATTTTAGTCTCGAACAGGAATCTCTTTGCGCTAGGGTTCTTCAGCCCTAGAAATTCTGGCAAAAGTTACGTTGGAGTTTGGTATAACAAAGTTCCAGAGCGGACCATTGTTTGGGTAGCAAATAGAGACAACCCTGTCAATAATTCCTCTGGACTTCTAGTGATCGATGCAGATGGAGGCCTTGTCATATATGGAAAGGACAGAAAACTCCCTCTTTGGTCAGCTAATGTTACTCTCTCTTCTCCAAAAAACTCCATGGCCAAGCTGTTGGATACAGGTAACTTTGTTTTGTTTGAGAATGGCCGGAGCCTGTGGGAAGGGTTTGATTATCCCTCAAATACAATGCTTCCCTTCATGAAAATTGGGCTGAACAGGCTATCCGGGTTCAACCGGTTCCTAACTTCTTGGAAGTCCCAAGATGACCCGGGTACCGGGAATTTCTCATATAAGATTGATCCAGATGGGTTTCCGCAGCTGATTTTGTATGAAGGTCAAGCTCCCCGGTGGCGGGCCGGATCTTGGATCGGGCACAGATTGAGTGGTATCCCCATAATGACTCCTAATTCCATCTTCAACGTTAGTTTTGTGAACAATCAAGATGAGCTATCCATCATGTATGGCATCAAGGATGACTCAATCTTCACAAGGACGGTGCTTTATGAATCGGGAATCGTCGAACGGTCCACGTGGAAAGATCAGGAACACCAATGGATCAAGTTTTGGTCTGCTCCGGTAGAGCTATGTGACAACTATGGAGAGTGTGGTCCGAATAGCAACTGTGACCCTTACAATGCTGGTGAGTTCGAGTGTACATGCCTACCTGGGTTTGAACCTAAGTCGATCCATGCATGGTACTTGAGAGATGGCTCGGGAGGGTGTGTGAGGAAAAAAGGAGTATCCATGTGTGAAAACGGAGAAGGGTTCGTGAAGGTGTCACTAGTAAAGGAACCAGACTCATCTACTGCGCGCGTAAACTTGACATTGGGTCTGAAAGAATGCGAAGAGGAGTGCTTAAGGAATTGTTCTTGCATGGCATACTCGAGTGCAGGTGACCCGCAAGGAGGGAATGGATGCGTGGCATGGTACGGGGACTTGATGGATACAAGGACTTACACGATTGTCAATCAAGATTTATATGTTCGAGTTGATTCAATTGAATTAGCTAAATATGCAAAGAAGACGAATGGTTCTCTTAGTAAGATGGGAAAGATGGCAATTACGATAACTTCTATTTTAGTGTTCTTTGTTGTGATCTCTATCGCATATTGGTCAACAAAGATGAAGAGAAAAGGTACGGAAACACAAAACCTATTTTCATTTGGTGTGATCACACCTTCAGTCTACTTGGAAGATTTTTGTAGTAGAACAGATCCAGATCATAGCAGATTAGAGTCGGAGGCACCTTTCTTTGATTTAAGCACCATAACTGCAGCCACCAAAAATTTCTCTGATTCCAACAGGCTTGGAGAAGGCGGATTTGGCCACGTTTATAAGGGAGTGCTTTCTAGTGGAACAGAAATAGCCGTGAAAAGACTAAGCAAAAATTCGGGCCAGGGAAATGAACAGTTCAAGAATGAAGTTGTGCTGATTGCAAAACTTCAACACAGGAACCTTGTGAGACTCTTGGGCTATTGCGTTCAAGATGAAGAGAAGATGTTAATCTATGAATACCTGCCTAACAAAAGCCTGGACTCGTTCATTTTCAATGAAATGAAAAGGACATCTCTGGATTGGACAAGACGCTTGGAGATTATCTTTGGCATTGCTAGAGGGATCTTGTATCTTCATCAAGATTCGAGATTAAGAATCATCCACAGAGACCTAAAGGCCAGCAATATTCTACTCGATTATGATATGAACCCCAAAATTGCAGATTTTGGTGTGGCTAGAATATTTGGAGCAAACCAAATTGAAGCAAATACAAATCGCGTGGTTGGAACATATGGTTACATGTCACCGGAGTATGCAATGGAAGGGCTATTTTCAGTGAAGTCCGATGTATACAGTTTCGGTGTTTTGCTACTAGAAATCATTACGGCAGAAAGAACACGGCTACTACTATGA

Protein Analysis

726

Amino Acids

81.6

Weight (kDa)

6.32

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 176 1.5e-30 D-mannose binding lectin
S_locus_glycop PF00954 208 - 319 4.9e-28 S-locus glycoprotein domain
PAN_2 PF08276 341 - 407 1.2e-18 PAN-like domain
Pkinase PF00069 523 - 720 3.2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 525 - 719 4.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1608
AarI CACCTGC 1 cut(s) 1154
AasI GACNNNNNNGTC 2 cut(s) 122, 251
Acc36I ACCTGC 2 cut(s) 1154, 1797
Acc65I GGTACC 1 cut(s) 545
AccB1I GGYRCC 2 cut(s) 545, 1516
AccB7I CCANNNNNTGG 1 cut(s) 228
AccBSI CCGCTC 1 cut(s) 217
AccI GTMKAC 2 cut(s) 1458, 2118
AccII CGCG 3 cut(s) 1084, 1086, 2046
AciI CCGC 5 cut(s) 217, 587, 625, 1172, 1590
AclI AACGTT 1 cut(s) 693
AclWI GGATC 7 cut(s) 566, 640, 647, 836, 952, 1481, 1898
AcoI YGGCCR 3 cut(s) 375, 418, 1597
AcsI RAATTY 4 cut(s) 169, 553, 1558, 1660
AcuI CTGAAG 2 cut(s) 142, 1437
AcvI CACGTG 1 cut(s) 804
AfaI GTAC 5 cut(s) 547, 928, 971, 1202, 1411
AfiI CCNNNNNNNGG 6 cut(s) 228, 548, 624, 625, 636, 1178
AflII CTTAAG 1 cut(s) 1129
AflIII ACRYGT 1 cut(s) 2067
AgeI ACCGGT 1 cut(s) 507
AhdI GACNNNNNGTC 1 cut(s) 1101
AhlI ACTAGT 1 cut(s) 1054
AjnI CCWGG 3 cut(s) 937, 1668, 1803
AjuI GAANNNNNNNTTGG 2 cut(s) 1578, 1610
AloI GAACNNNNNNTCC 2 cut(s) 479, 511
AluBI AGCT 7 cut(s) 341, 382, 592, 614, 721, 856, 1280
AluI AGCT 7 cut(s) 341, 382, 592, 614, 721, 856, 1280
Alw26I GTCTC 4 cut(s) 130, 237, 1729, 1929
AlwI GGATC 7 cut(s) 566, 640, 647, 836, 952, 1481, 1898
Ama87I CYCGRG 3 cut(s) 541, 985, 1156
AoxI GGCC 7 cut(s) 295, 375, 418, 627, 1597, 1666, 1944
ApeKI GCWGC 2 cut(s) 589, 1547
ApoI RAATTY 4 cut(s) 169, 553, 1558, 1660
AsiGI ACCGGT 1 cut(s) 507
Asp718I GGTACC 1 cut(s) 545
AspLEI GCGC 3 cut(s) 148, 1084, 1086
AspS9I GGNCC 5 cut(s) 219, 627, 798, 881, 1666
AsuC2I CCSGG 5 cut(s) 499, 542, 543, 550, 619
AsuHPI GGTGA 3 cut(s) 926, 1178, 2064
AvaI CYCGRG 3 cut(s) 541, 985, 1156
AvaII GGWCC 3 cut(s) 219, 798, 881
BaeGI GKGCMC 1 cut(s) 648
BaeI ACNNNNGTAYC 2 cut(s) 529, 562
BalI TGGCCA 2 cut(s) 377, 1599
BanI GGYRCC 2 cut(s) 545, 1516
BbrPI CACGTG 1 cut(s) 804
BbsI GAAGAC 1 cut(s) 1301
BbvI GCAGC 2 cut(s) 601, 1559
BccI CCATC 9 cut(s) 110, 284, 572, 692, 734, 974, 1207, 1312, 1321
BceAI ACGGC 3 cut(s) 127, 1625, 2169
BciT130I CCWGG 3 cut(s) 939, 1670, 1805
BciVI GTATCC 4 cut(s) 382, 671, 1024, 1210
BclI TGATCA 2 cut(s) 24, 1443
BcnI CCSGG 5 cut(s) 499, 542, 543, 550, 619
BcoDI GTCTC 4 cut(s) 130, 237, 1729, 1929
BcuI ACTAGT 1 cut(s) 1054
BfaI CTAG 8 cut(s) 149, 165, 275, 1055, 1623, 1884, 2004, 2141
BfmI CTRYAG 1 cut(s) 1545
BfrI CTTAAG 1 cut(s) 1129
BfuAI ACCTGC 2 cut(s) 1154, 1797
BfuI GTATCC 4 cut(s) 382, 671, 1024, 1210
BisI GCNGC 2 cut(s) 590, 1548
BlsI GCNGC 2 cut(s) 591, 1549
Bme1390I CCNGG 8 cut(s) 499, 542, 543, 550, 619, 939, 1670, 1805
Bme18I GGWCC 3 cut(s) 219, 798, 881
BmeRI GACNNNNNGTC 1 cut(s) 1101
BmeT110I CYCGRG 3 cut(s) 541, 985, 1156
BmgT120I GGNCC 5 cut(s) 219, 627, 798, 881, 1666
BmiI GGNNCC 6 cut(s) 425, 512, 547, 1065, 1518, 1727
BmrFI CCNGG 8 cut(s) 499, 542, 543, 550, 619, 939, 1670, 1805
BmsI GCATC 4 cut(s) 78, 274, 747, 1178
BpiI GAAGAC 1 cut(s) 1301
BpuEI CTTGAG 1 cut(s) 994
BpuMI CCSGG 5 cut(s) 499, 542, 543, 550, 619
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 804
BsaBI GATNNNNATC 3 cut(s) 1373, 1491, 1775
BsaI GGTCTC 1 cut(s) 1929
BsaJI CCNNGG 5 cut(s) 372, 541, 617, 938, 1669
BsaWI WCCGGW 3 cut(s) 507, 847, 2074
BsaXI ACNNNNNCTCC 4 cut(s) 285, 315, 981, 1011
Bsc4I CCNNNNNNNGG 6 cut(s) 228, 548, 624, 625, 636, 1178
Bse118I RCCGGY 1 cut(s) 507
Bse3DI GCAATG 3 cut(s) 32, 1878, 2091
Bse8I GATNNNNATC 3 cut(s) 1373, 1491, 1775
BseBI CCWGG 3 cut(s) 939, 1670, 1805
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 5 cut(s) 372, 541, 617, 938, 1669
BseGI GGATG 3 cut(s) 751, 1193, 1926
BseJI GATNNNNATC 3 cut(s) 1373, 1491, 1775
BseLI CCNNNNNNNGG 6 cut(s) 228, 548, 624, 625, 636, 1178
BseMI GCAATG 3 cut(s) 32, 1878, 2091
BsePI GCGCGC 1 cut(s) 1082
BseRI GAGGAG 1 cut(s) 1136
BseSI GKGCMC 1 cut(s) 648
BseXI GCAGC 2 cut(s) 601, 1559
BsgI GTGCAG 1 cut(s) 1182
Bsh1236I CGCG 3 cut(s) 1084, 1086, 2046
BshFI GGCC 7 cut(s) 297, 377, 420, 629, 1599, 1668, 1946
BshNI GGYRCC 2 cut(s) 545, 1516
BshTI ACCGGT 1 cut(s) 507
BshVI ATCGAT 1 cut(s) 282
BsiHKCI CYCGRG 3 cut(s) 541, 985, 1156
BsiSI CCGG 9 cut(s) 421, 498, 508, 542, 549, 619, 630, 848, 2075
BslFI GGGAC 2 cut(s) 514, 1220
BslI CCNNNNNNNGG 6 cut(s) 228, 548, 624, 625, 636, 1178
BsmAI GTCTC 4 cut(s) 130, 237, 1729, 1929
BsmFI GGGAC 2 cut(s) 514, 1220
BsmI GAATGC 1 cut(s) 1118
BsnI GGCC 7 cut(s) 297, 377, 420, 629, 1599, 1668, 1946
Bso31I GGTCTC 1 cut(s) 1929
BsoBI CYCGRG 3 cut(s) 541, 985, 1156
Bsp1286I GDGCHC 1 cut(s) 648
Bsp1407I TGTACA 1 cut(s) 926
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 5 cut(s) 217, 587, 625, 1172, 1590
BspANI GGCC 7 cut(s) 297, 377, 420, 629, 1599, 1668, 1946
BspDI ATCGAT 1 cut(s) 282
BspFNI CGCG 3 cut(s) 1084, 1086, 2046
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 6 cut(s) 425, 512, 547, 1065, 1518, 1727
BspMAI CTGCAG 1 cut(s) 1549
BspMI ACCTGC 2 cut(s) 1154, 1797
BspPI GGATC 7 cut(s) 566, 640, 647, 836, 952, 1481, 1898
BspT107I GGYRCC 2 cut(s) 545, 1516
BspTI CTTAAG 1 cut(s) 1129
BspTNI GGTCTC 1 cut(s) 1929
BsrBI CCGCTC 1 cut(s) 217
BsrDI GCAATG 3 cut(s) 32, 1878, 2091
BsrFI RCCGGY 1 cut(s) 507
BsrGI TGTACA 1 cut(s) 926
BssAI RCCGGY 1 cut(s) 507
BssECI CCNNGG 5 cut(s) 372, 541, 617, 938, 1669
BssHII GCGCGC 1 cut(s) 1082
BssNAI GTATAC 1 cut(s) 2119
BssT1I CCWWGG 1 cut(s) 372
Bst1107I GTATAC 1 cut(s) 2119
Bst2UI CCWGG 3 cut(s) 939, 1670, 1805
Bst4CI ACNGT 5 cut(s) 769, 798, 896, 1683, 2123
Bst6I CTCTTC 4 cut(s) 361, 1113, 1394, 1758
BstAFI CTTAAG 1 cut(s) 1129
BstAUI TGTACA 1 cut(s) 926
BstBAI YACGTR 1 cut(s) 804
BstC8I GCNNGC 3 cut(s) 627, 1084, 1948
BstDEI CTNAG 3 cut(s) 951, 1310, 1652
BstDSI CCRYGG 1 cut(s) 372
BstEII GGTNACC 1 cut(s) 1166
BstF5I GGATG 3 cut(s) 751, 1193, 1926
BstFNI CGCG 3 cut(s) 1084, 1086, 2046
BstHHI GCGC 3 cut(s) 148, 1084, 1086
BstMAI GTCTC 4 cut(s) 130, 237, 1729, 1929
BstMWI GCNNNNNNNGC 3 cut(s) 490, 1286, 1596
BstNI CCWGG 3 cut(s) 939, 1670, 1805
BstNSI RCATGY 2 cut(s) 933, 2071
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 8 cut(s) 497, 540, 541, 548, 617, 937, 1668, 1803
BstSFI CTRYAG 1 cut(s) 1545
BstSLI GKGCMC 1 cut(s) 648
BstUI CGCG 3 cut(s) 1084, 1086, 2046
BstV1I GCAGC 2 cut(s) 601, 1559
BstV2I GAAGAC 1 cut(s) 1301
BstX2I RGATCY 3 cut(s) 632, 1486, 1890
BstXI CCANNNNNNTGG 1 cut(s) 385
BstYI RGATCY 3 cut(s) 632, 1486, 1890
BstZ17I GTATAC 1 cut(s) 2119
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 4 cut(s) 382, 671, 1024, 1210
BsuRI GGCC 7 cut(s) 297, 377, 420, 629, 1599, 1668, 1946
BsuTUI ATCGAT 1 cut(s) 282
BtgI CCRYGG 1 cut(s) 372
BtsCI GGATG 3 cut(s) 751, 1193, 1926
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 27, 2109
BveI ACCTGC 2 cut(s) 1154, 1797
Cac8I GCNNGC 3 cut(s) 627, 1084, 1948
CciI TCATGA 1 cut(s) 471
CfoI GCGC 3 cut(s) 148, 1084, 1086
Cfr10I RCCGGY 1 cut(s) 507
Cfr13I GGNCC 5 cut(s) 219, 627, 798, 881, 1666
Cfr9I CCCGGG 1 cut(s) 541
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 1 cut(s) 1866
Csp6I GTAC 5 cut(s) 546, 927, 970, 1201, 1410
CspAI ACCGGT 1 cut(s) 507
CspCI CAANNNNNGTGG 2 cut(s) 2028, 2063
CviQI GTAC 5 cut(s) 546, 927, 970, 1201, 1410
DdeI CTNAG 3 cut(s) 951, 1310, 1652
DrdI GACNNNNNNGTC 2 cut(s) 122, 251
DriI GACNNNNNGTC 1 cut(s) 1101
DseDI GACNNNNNNGTC 2 cut(s) 122, 251
EaeI YGGCCR 3 cut(s) 375, 418, 1597
Eam1104I CTCTTC 4 cut(s) 361, 1113, 1394, 1758
Eam1105I GACNNNNNGTC 1 cut(s) 1101
EarI CTCTTC 4 cut(s) 361, 1113, 1394, 1758
EciI GGCGGA 1 cut(s) 1605
Eco130I CCWWGG 1 cut(s) 372
Eco147I AGGCCT 1 cut(s) 297
Eco31I GGTCTC 1 cut(s) 1929
Eco47I GGWCC 3 cut(s) 219, 798, 881
Eco57I CTGAAG 2 cut(s) 142, 1437
Eco72I CACGTG 1 cut(s) 804
Eco88I CYCGRG 3 cut(s) 541, 985, 1156
Eco91I GGTNACC 1 cut(s) 1166
EcoO65I GGTNACC 1 cut(s) 1166
EcoRII CCWGG 3 cut(s) 937, 1668, 1803
EcoT14I CCWWGG 1 cut(s) 372
EcoT22I ATGCAT 1 cut(s) 967
ErhI CCWWGG 1 cut(s) 372
FaqI GGGAC 2 cut(s) 514, 1220
FauI CCCGC 2 cut(s) 618, 1179
FauNDI CATATG 1 cut(s) 2059
FbaI TGATCA 2 cut(s) 24, 1443
FblI GTMKAC 2 cut(s) 1458, 2118
Fnu4HI GCNGC 2 cut(s) 590, 1548
FokI GGATG 3 cut(s) 758, 1200, 1913
Fsp4HI GCNGC 2 cut(s) 590, 1548
FspBI CTAG 8 cut(s) 149, 165, 275, 1055, 1623, 1884, 2004, 2141
GlaI GCGC 3 cut(s) 147, 1083, 1085
GluI GCNGC 2 cut(s) 590, 1548
HaeIII GGCC 7 cut(s) 297, 377, 420, 629, 1599, 1668, 1946
HapII CCGG 9 cut(s) 421, 498, 508, 542, 549, 619, 630, 848, 2075
HgaI GACGC 1 cut(s) 1866
HhaI GCGC 3 cut(s) 148, 1084, 1086
Hin6I GCGC 3 cut(s) 146, 1082, 1084
HinP1I GCGC 3 cut(s) 146, 1082, 1084
HincII GTYRAC 1 cut(s) 1389
HindII GTYRAC 1 cut(s) 1389
HpaII CCGG 9 cut(s) 421, 498, 508, 542, 549, 619, 630, 848, 2075
HphI GGTGA 3 cut(s) 926, 1178, 2064
Hpy166II GTNNAC 7 cut(s) 706, 801, 927, 1090, 1389, 1459, 2119
Hpy188I TCNGA 6 cut(s) 93, 885, 1107, 1513, 1567, 2113
Hpy8I GTNNAC 7 cut(s) 706, 801, 927, 1090, 1389, 1459, 2119
Hpy99I CGWCG 1 cut(s) 794
HpyAV CCTTC 8 cut(s) 428, 478, 599, 1028, 1039, 1461, 1580, 2084
HpyCH4III ACNGT 5 cut(s) 769, 798, 896, 1683, 2123
HpyCH4IV ACGT 4 cut(s) 186, 693, 803, 1602
HpyF10VI GCNNNNNNNGC 3 cut(s) 490, 1286, 1596
HpyF3I CTNAG 3 cut(s) 951, 1310, 1652
HpySE526I ACGT 4 cut(s) 186, 693, 803, 1602
HspAI GCGC 3 cut(s) 146, 1082, 1084
KpnI GGTACC 1 cut(s) 549
Ksp22I TGATCA 2 cut(s) 24, 1443
LmnI GCTCC 4 cut(s) 423, 619, 850, 2015
Lsp1109I GCAGC 2 cut(s) 601, 1559
LweI GCATC 4 cut(s) 78, 274, 747, 1178
MaeI CTAG 8 cut(s) 149, 165, 275, 1055, 1623, 1884, 2004, 2141
MaeII ACGT 4 cut(s) 186, 693, 803, 1602
MaeIII GTNAC 9 cut(s) 182, 346, 395, 860, 896, 1050, 1166, 2063, 2070
MbiI CCGCTC 1 cut(s) 217
MfeI CAATTG 1 cut(s) 1269
MflI RGATCY 3 cut(s) 632, 1486, 1890
MhlI GDGCHC 1 cut(s) 648
MlsI TGGCCA 2 cut(s) 377, 1599
MluNI TGGCCA 2 cut(s) 377, 1599
MlyI GAGTC 6 cut(s) 667, 743, 1064, 1517, 1731, 1802
MmeI TCCRAC 5 cut(s) 169, 366, 1491, 1596, 2032
Mox20I TGGCCA 2 cut(s) 377, 1599
Mph1103I ATGCAT 1 cut(s) 967
MscI TGGCCA 2 cut(s) 377, 1599
MseI TTAA 4 cut(s) 1130, 1532, 1775, 1919
Msp20I TGGCCA 2 cut(s) 377, 1599
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 1129
MspI CCGG 9 cut(s) 421, 498, 508, 542, 549, 619, 630, 848, 2075
MspR9I CCNGG 8 cut(s) 499, 542, 543, 550, 619, 939, 1670, 1805
MunI CAATTG 1 cut(s) 1269
Mva1269I GAATGC 1 cut(s) 1118
MvaI CCWGG 3 cut(s) 939, 1670, 1805
MvnI CGCG 3 cut(s) 1084, 1086, 2046
MwoI GCNNNNNNNGC 3 cut(s) 490, 1286, 1596
NciI CCSGG 5 cut(s) 499, 542, 543, 550, 619
NcoI CCATGG 1 cut(s) 372
NdeI CATATG 1 cut(s) 2059
NlaIV GGNNCC 6 cut(s) 425, 512, 547, 1065, 1518, 1727
NmuCI GTSAC 5 cut(s) 860, 896, 1050, 1166, 2070
NsiI ATGCAT 1 cut(s) 967
NspI RCATGY 2 cut(s) 933, 2071
PaeR7I CTCGAG 1 cut(s) 1156
PagI TCATGA 1 cut(s) 471
PaqCI CACCTGC 1 cut(s) 1154
PauI GCGCGC 1 cut(s) 1082
PceI AGGCCT 1 cut(s) 297
PciI ACATGT 1 cut(s) 2067
PctI GAATGC 1 cut(s) 1118
PfeI GAWTC 8 cut(s) 80, 136, 779, 786, 1265, 1568, 1910, 1923
PflMI CCANNNNNTGG 1 cut(s) 228
PinAI ACCGGT 1 cut(s) 507
PkrI GCNGC 2 cut(s) 591, 1549
PleI GAGTC 6 cut(s) 667, 743, 1064, 1516, 1731, 1802
PmaCI CACGTG 1 cut(s) 804
PmlI CACGTG 1 cut(s) 804
PpsI GAGTC 6 cut(s) 667, 743, 1064, 1516, 1731, 1802
Ppu21I YACGTR 1 cut(s) 804
PscI ACATGT 1 cut(s) 2067
PsiI TTATAA 1 cut(s) 1608
Psp1406I AACGTT 1 cut(s) 693
Psp6I CCWGG 3 cut(s) 937, 1668, 1803
PspCI CACGTG 1 cut(s) 804
PspEI GGTNACC 1 cut(s) 1166
PspGI CCWGG 3 cut(s) 937, 1668, 1803
PspN4I GGNNCC 6 cut(s) 425, 512, 547, 1065, 1518, 1727
PspPI GGNCC 5 cut(s) 219, 627, 798, 881, 1666
PspXI VCTCGAGB 1 cut(s) 1156
PstI CTGCAG 1 cut(s) 1549
PsuI RGATCY 3 cut(s) 632, 1486, 1890
PteI GCGCGC 1 cut(s) 1082
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 5 cut(s) 547, 928, 971, 1202, 1411
RsaNI GTAC 5 cut(s) 546, 927, 970, 1201, 1410
SaqAI TTAA 4 cut(s) 1130, 1532, 1775, 1919
SatI GCNGC 2 cut(s) 590, 1548
Sau96I GGNCC 5 cut(s) 219, 627, 798, 881, 1666
SchI GAGTC 6 cut(s) 667, 743, 1064, 1517, 1731, 1802
ScrFI CCNGG 8 cut(s) 499, 542, 543, 550, 619, 939, 1670, 1805
SduI GDGCHC 1 cut(s) 648
SfaNI GCATC 4 cut(s) 78, 274, 747, 1178
SfcI CTRYAG 1 cut(s) 1545
Sfr274I CTCGAG 1 cut(s) 1156
SinI GGWCC 3 cut(s) 219, 798, 881
SlaI CTCGAG 1 cut(s) 1156
SmaI CCCGGG 1 cut(s) 543
SmlI CTYRAG 3 cut(s) 973, 1129, 1156
SmoI CTYRAG 3 cut(s) 973, 1129, 1156
SpeI ACTAGT 1 cut(s) 1054
SseBI AGGCCT 1 cut(s) 297
SsiI CCGC 5 cut(s) 217, 587, 625, 1172, 1590
SspI AATATT 2 cut(s) 1954, 2010
SspMI CTAG 8 cut(s) 149, 165, 275, 1055, 1623, 1884, 2004, 2141
StuI AGGCCT 1 cut(s) 297
StyD4I CCNGG 8 cut(s) 497, 540, 541, 548, 617, 937, 1668, 1803
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 5 cut(s) 769, 798, 896, 1683, 2123
TaiI ACGT 4 cut(s) 189, 696, 806, 1605
TaqI TCGA 9 cut(s) 128, 282, 792, 921, 956, 1157, 1258, 1913, 1962
TatI WGTACW 1 cut(s) 926
TfiI GAWTC 8 cut(s) 80, 136, 779, 786, 1265, 1568, 1910, 1923
Tru1I TTAA 4 cut(s) 1130, 1532, 1775, 1919
Tru9I TTAA 4 cut(s) 1130, 1532, 1775, 1919
TscAI CASTG 2 cut(s) 34, 2109
TseFI GTSAC 5 cut(s) 860, 896, 1050, 1166, 2070
TseI GCWGC 2 cut(s) 589, 1547
Tsp45I GTSAC 5 cut(s) 860, 896, 1050, 1166, 2070
TspGWI ACGGA 2 cut(s) 1044, 1427
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 2 cut(s) 34, 2109
Van91I CCANNNNNTGG 1 cut(s) 228
Vha464I CTTAAG 1 cut(s) 1129
VpaK11BI GGWCC 3 cut(s) 219, 798, 881
XapI RAATTY 4 cut(s) 169, 553, 1558, 1660
XceI RCATGY 2 cut(s) 933, 2071
XhoI CTCGAG 1 cut(s) 1156
XmaI CCCGGG 1 cut(s) 541
XmiI GTMKAC 2 cut(s) 1458, 2118
XspI CTAG 8 cut(s) 149, 165, 275, 1055, 1623, 1884, 2004, 2141
Zsp2I ATGCAT 1 cut(s) 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.