RchiOBHm_Chr5g0034371

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Forward (+)
28197234 .. 28201235
4002 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31338

Sequence Viewer

Length: 2559 bp
ATGAGTTCCAGCATCGAAGCGTTTATCCTGATATTGCTTCTCTTACTTCTTCTCCCCTCTAGAATTTGCCAGCTTCCCCTTGACGCCCTTACGTCAGACCGTCCCATCAGAGATGGCGAAGTTTTAGTCTCTAGCACGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAATTCTCAGCACCGCTACGTTGGAGTCTGGTATAACAAAGTTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGATAACCCAGTGAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCGAAGTACCACTCTTTGGTCCGCAAACGTTACTCTATCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATAGCCAAAGAGTTCTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTTCCTCTATGAAGATTGGGCTGAACTGGCGGTCCGGTTTGGAGTGGCACCTAACATCTTGGAAGTCAAAAGATGATCCGGGAACCGGGAGTTGTACATATGGGATAGACCCGATGGGGTTTGCGCAGTTGTTTTTGTACAAGGGTAGAGGGGCATCGTGGCGGGGCGGCCCTTGGATCGGGGACAGATGGAGCGGTCTACCAGTAATAACCGCTACCGTTGGAGCCTACAATGTGAGTTTTGTCAATAATGAAGATGAGCTATCCTTCGTGTATGCTATTGCCAGGGACTCAGTGATCACAAGGGGGGTGATAGATGAATCAGGAATATATCAACTGCTCGTGTGGAATGATCAGGAAAATCAATGGACCAAATTCGTCTCCTACCCGAGTGAGTGGTGTGATCAATATGGACAGTGTGGTCCAAATACTAACTGTGACTCAGACAAGGACTATATGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTCCTTTGAGAGTTGGCGGGGGTGGGTGCATTAGGAAAGCTGGAGCGTCGACGTGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGCATGTAAAAATACCGGACTCGTCTACGGCACGTGTGAACATGAGTATGAGTTTGAAAGGGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACAGCTTACACGAATGCGGATGAGCGGGGAGGTGGGATCGGGTGTGTGACATGGCACGGGGACTTGATGGACACGAGGACTTTCTCCAATGCTGGTCAAAATTTATATGTTCGAGTTGACACAACTTCTTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTGGGATCTGTTACAGTTTTTCTTCTCTTACTTACCCTTTATTGGTTGATAAGCATGAAGATGAAAGGAATATGGAAACAAGCTTATAAAAAAATTACTTTTCTGTCTTTGATAATAGGTAAGCGTAGGCAAAATAAATATCCACTTAAACTTACTGCCGGGTCAACCTACTTCGAAGAAGCTACTGGTAGATTAGCTCTTCATGATAGTAGAATAAACTCGGAGTTATTATTCTTTCATCTAAAAACCATAGCAACCGCCACAAAGAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGTTTTGGCTGCGTTTATAAGGGCATACTTTATGATGGAAAGGAAATAGCCATAAAAAGACTATCCAAGTTTTCTAGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACATAGAAACCTTGTCAAGATTTTAGGTTGTTGTCTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACACTTTCATCTTTAATGAAACAAGAAGAGTACTTTTAAGTTGGACAAGACGCCTCGTGATAATCTTTGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCGAGACTGAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATGTTTAGAGAGGAGCAAACTGAAGCAAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGAAGGATTGTTTTCAATCAAGTCTGATGTGTATAGTTTTGGTGTCTTATTACTAGAAATCGTTACTGGCAAAAAGAATGCTGGTTCCCATGAGGGGTATCCTTATTCAAATTTGATCGGACATATTTGGGAGTTGTGGAAAGAAGGCAGAGTCGTGGAAATCATCGATTCATCTTTAGGTGAATCTTACCTTGTTAGTGAAATTATAAGGTGCATTCAAATCGCACTCTTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCCAGAGTTGTTTCCATGTTAGGTAATGATTCAGCTCTTCCTTCACCAACACAACCCGCATTTTTACTAAAGAGAATGAGTCCTAGTGGAAACTCATCCAGCAACAAAGGAGCTAATTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

852

Amino Acids

94.63

Weight (kDa)

8.41

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 178 6.7e-33 D-mannose binding lectin
S_locus_glycop PF00954 210 - 321 2.5e-25 S-locus glycoprotein domain
PAN_2 PF08276 341 - 407 1.7e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 537 - 807 3.3e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 537 - 802 1.1e-43 Protein kinase domain
DUF3403 PF11883 809 - 852 8.4e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1422, 1653, 2339
AasI GACNNNNNNGTC 1 cut(s) 888
Acc16I TGCGCA 1 cut(s) 594
AccB1I GGYRCC 1 cut(s) 516
AccB7I CCANNNNNTGG 2 cut(s) 231, 336
AccBSI CCGCTC 2 cut(s) 663, 1171
AccI GTMKAC 3 cut(s) 667, 1016, 1076
AclI AACGTT 1 cut(s) 348
AclWI GGATC 4 cut(s) 539, 653, 1190, 1348
AcoI YGGCCR 1 cut(s) 2390
AcsI RAATTY 7 cut(s) 63, 172, 842, 1246, 1603, 2242, 2375
AcuI CTGAAG 2 cut(s) 145, 2094
AcvI CACGTG 2 cut(s) 939, 1085
AcyI GRCGYC 2 cut(s) 84, 1903
AfaI GTAC 5 cut(s) 328, 565, 608, 1884, 2539
AfiI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2226
AflIII ACRYGT 3 cut(s) 1019, 1084, 2534
AgsI TTSAA 8 cut(s) 1108, 1616, 1724, 1802, 2020, 2148, 2241, 2351
AjiI CACGTC 1 cut(s) 1020
AjnI CCWGG 2 cut(s) 752, 946
AjuI GAANNNNNNNTTGG 4 cut(s) 1608, 1623, 1640, 1655
AleI CACNNNNGTG 1 cut(s) 2362
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
Alw26I GTCTC 3 cut(s) 133, 853, 1954
AlwI GGATC 4 cut(s) 539, 653, 1190, 1348
Ama87I CYCGRG 1 cut(s) 856
AoxI GGCC 4 cut(s) 298, 637, 1989, 2390
ApeKI GCWGC 1 cut(s) 1644
ApoI RAATTY 7 cut(s) 63, 172, 842, 1246, 1603, 2242, 2375
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
Asp700I GAANNNNTTC 1 cut(s) 1743
AspLEI GCGC 2 cut(s) 595, 1054
AspS9I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
AsuC2I CCSGG 4 cut(s) 168, 549, 556, 1495
AsuHPI GGTGA 7 cut(s) 302, 354, 790, 957, 2109, 2324, 2436
AsuII TTCGAA 2 cut(s) 954, 1509
AvaI CYCGRG 1 cut(s) 856
AvaII GGWCC 5 cut(s) 319, 339, 501, 837, 890
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BanI GGYRCC 1 cut(s) 516
BauI CACGAG 3 cut(s) 809, 1219, 1907
BbrPI CACGTG 2 cut(s) 939, 1085
BbvI GCAGC 1 cut(s) 1631
BccI CCATC 8 cut(s) 107, 113, 287, 577, 651, 1126, 1207, 1664
BceAI ACGGC 1 cut(s) 1095
BcgI CGANNNNNNTGC 2 cut(s) 2335, 2369
BciT130I CCWGG 2 cut(s) 754, 948
BciVI GTATCC 2 cut(s) 385, 2241
BclI TGATCA 3 cut(s) 765, 820, 871
BcnI CCSGG 4 cut(s) 168, 549, 556, 1495
BcoDI GTCTC 3 cut(s) 133, 853, 1954
BfaI CTAG 8 cut(s) 60, 132, 152, 1710, 1929, 2049, 2186, 2484
BfuI GTATCC 2 cut(s) 385, 2241
BglII AGATCT 1 cut(s) 1981
BisI GCNGC 2 cut(s) 637, 1645
BlsI GCNGC 2 cut(s) 638, 1646
BmcAI AGTACT 1 cut(s) 1884
Bme1390I CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1495
Bme18I GGWCC 5 cut(s) 319, 339, 501, 837, 890
BmeT110I CYCGRG 1 cut(s) 856
BmgBI CACGTC 1 cut(s) 1020
BmgT120I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
BmiI GGNNCC 4 cut(s) 518, 553, 694, 2218
BmrFI CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1495
BmrI ACTGGG 2 cut(s) 248, 1346
BmsI GCATC 2 cut(s) 21, 632
BmuI ACTGGG 2 cut(s) 248, 1346
BpmI CTGGAG 1 cut(s) 1029
Bpu14I TTCGAA 2 cut(s) 954, 1509
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 4 cut(s) 168, 549, 556, 1495
Bsa29I ATCGAT 2 cut(s) 281, 2298
BsaAI YACGTR 2 cut(s) 939, 1085
BsaBI GATNNNNATC 1 cut(s) 1820
BsaHI GRCGYC 2 cut(s) 84, 1903
BsaJI CCNNGG 5 cut(s) 166, 641, 753, 947, 1714
BsaWI WCCGGW 2 cut(s) 503, 1066
BsaXI ACNNNNNCTCC 4 cut(s) 36, 66, 288, 318
Bsc4I CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2226
Bse118I RCCGGY 1 cut(s) 2388
Bse1I ACTGG 6 cut(s) 254, 500, 671, 1341, 1525, 2203
Bse3DI GCAATG 2 cut(s) 2002, 2136
Bse8I GATNNNNATC 1 cut(s) 1820
BseBI CCWGG 2 cut(s) 754, 948
BseCI ATCGAT 2 cut(s) 281, 2298
BseDI CCNNGG 5 cut(s) 166, 641, 753, 947, 1714
BseGI GGATG 2 cut(s) 1171, 2495
BseJI GATNNNNATC 1 cut(s) 1820
BseLI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2226
BseMI GCAATG 2 cut(s) 2002, 2136
BseMII CTCAG 5 cut(s) 191, 471, 774, 924, 1955
BseNI ACTGG 6 cut(s) 254, 500, 671, 1341, 1525, 2203
BseRI GAGGAG 1 cut(s) 2078
BseXI GCAGC 1 cut(s) 1631
BshFI GGCC 4 cut(s) 300, 639, 1991, 2392
BshNI GGYRCC 1 cut(s) 516
BshVI ATCGAT 2 cut(s) 281, 2298
BsiHKCI CYCGRG 1 cut(s) 856
BsiSI CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1494, 2389
BslFI GGGAC 4 cut(s) 87, 665, 770, 1220
BslI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2226
BsmAI GTCTC 3 cut(s) 133, 853, 1954
BsmBI CGTCTC 1 cut(s) 853
BsmFI GGGAC 4 cut(s) 87, 665, 770, 1220
BsmI GAATGC 3 cut(s) 1165, 2215, 2346
BsnI GGCC 4 cut(s) 300, 639, 1991, 2392
BsoBI CYCGRG 1 cut(s) 856
Bsp119I TTCGAA 2 cut(s) 954, 1509
Bsp1407I TGTACA 3 cut(s) 563, 606, 2537
BspANI GGCC 4 cut(s) 300, 639, 1991, 2392
BspCNI CTCAG 5 cut(s) 190, 470, 773, 923, 1956
BspDI ATCGAT 2 cut(s) 281, 2298
BspHI TCATGA 2 cut(s) 1537, 1948
BspLI GGNNCC 4 cut(s) 518, 553, 694, 2218
BspPI GGATC 4 cut(s) 539, 653, 1190, 1348
BspQI GCTCTTC 2 cut(s) 1539, 2442
BspT104I TTCGAA 2 cut(s) 954, 1509
BspT107I GGYRCC 1 cut(s) 516
BsrBI CCGCTC 2 cut(s) 663, 1171
BsrDI GCAATG 2 cut(s) 2002, 2136
BsrFI RCCGGY 1 cut(s) 2388
BsrGI TGTACA 3 cut(s) 563, 606, 2537
BsrI ACTGG 6 cut(s) 254, 500, 671, 1341, 1525, 2203
BssAI RCCGGY 1 cut(s) 2388
BssECI CCNNGG 5 cut(s) 166, 641, 753, 947, 1714
BssNI GRCGYC 2 cut(s) 84, 1903
BssSI CACGAG 3 cut(s) 809, 1219, 1907
BssT1I CCWWGG 2 cut(s) 641, 1714
Bst2BI CACGAG 3 cut(s) 809, 1219, 1907
Bst2UI CCWGG 2 cut(s) 754, 948
Bst4CI ACNGT 5 cut(s) 101, 688, 885, 905, 1351
Bst6I CTCTTC 5 cut(s) 1539, 1719, 1803, 1873, 2442
BstACI GRCGYC 2 cut(s) 84, 1903
BstAUI TGTACA 3 cut(s) 563, 606, 2537
BstBAI YACGTR 2 cut(s) 939, 1085
BstBI TTCGAA 2 cut(s) 954, 1509
BstC8I GCNNGC 6 cut(s) 71, 137, 934, 1326, 1993, 2554
BstDEI CTNAG 6 cut(s) 177, 457, 760, 910, 1307, 1964
BstF5I GGATG 2 cut(s) 1171, 2495
BstHHI GCGC 2 cut(s) 595, 1054
BstMAI GTCTC 3 cut(s) 133, 853, 1954
BstMWI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
BstNI CCWGG 2 cut(s) 754, 948
BstNSI RCATGY 2 cut(s) 1058, 2538
BstSCI CCNGG 6 cut(s) 166, 547, 554, 752, 946, 1493
BstV1I GCAGC 1 cut(s) 1631
BstX2I RGATCY 2 cut(s) 1340, 1981
BstXI CCANNNNNNTGG 2 cut(s) 388, 2092
BstYI RGATCY 2 cut(s) 1340, 1981
Bsu15I ATCGAT 2 cut(s) 281, 2298
BsuI GTATCC 2 cut(s) 385, 2241
BsuRI GGCC 4 cut(s) 300, 639, 1991, 2392
BsuTUI ATCGAT 2 cut(s) 281, 2298
BtrI CACGTC 1 cut(s) 1020
BtsCI GGATG 2 cut(s) 1171, 2495
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 5 cut(s) 261, 464, 768, 890, 1334
Cac8I GCNNGC 6 cut(s) 71, 137, 934, 1326, 1993, 2554
CciI TCATGA 2 cut(s) 1537, 1948
CfoI GCGC 2 cut(s) 595, 1054
Cfr10I RCCGGY 1 cut(s) 2388
Cfr13I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
ClaI ATCGAT 2 cut(s) 281, 2298
CpoI CGGWCCG 1 cut(s) 501
CseI GACGC 3 cut(s) 92, 1002, 1911
Csp6I GTAC 5 cut(s) 327, 564, 607, 1883, 2538
CspI CGGWCCG 1 cut(s) 501
CviQI GTAC 5 cut(s) 327, 564, 607, 1883, 2538
DdeI CTNAG 6 cut(s) 177, 457, 760, 910, 1307, 1964
DrdI GACNNNNNNGTC 1 cut(s) 888
DseDI GACNNNNNNGTC 1 cut(s) 888
EaeI YGGCCR 1 cut(s) 2390
Eam1104I CTCTTC 5 cut(s) 1539, 1719, 1803, 1873, 2442
EarI CTCTTC 5 cut(s) 1539, 1719, 1803, 1873, 2442
Eco130I CCWWGG 2 cut(s) 641, 1714
Eco147I AGGCCT 1 cut(s) 300
Eco47I GGWCC 5 cut(s) 319, 339, 501, 837, 890
Eco57I CTGAAG 2 cut(s) 145, 2094
Eco72I CACGTG 2 cut(s) 939, 1085
Eco88I CYCGRG 1 cut(s) 856
EcoRII CCWGG 2 cut(s) 752, 946
EcoT14I CCWWGG 2 cut(s) 641, 1714
ErhI CCWWGG 2 cut(s) 641, 1714
Esp3I CGTCTC 1 cut(s) 853
FaqI GGGAC 4 cut(s) 87, 665, 770, 1220
FauI CCCGC 4 cut(s) 624, 977, 1164, 2464
FauNDI CATATG 2 cut(s) 568, 2104
FbaI TGATCA 3 cut(s) 765, 820, 871
FblI GTMKAC 3 cut(s) 667, 1016, 1076
Fnu4HI GCNGC 2 cut(s) 637, 1645
FokI GGATG 2 cut(s) 1178, 2482
Fsp4HI GCNGC 2 cut(s) 637, 1645
FspBI CTAG 8 cut(s) 60, 132, 152, 1710, 1929, 2049, 2186, 2484
FspI TGCGCA 1 cut(s) 594
GlaI GCGC 2 cut(s) 594, 1053
GluI GCNGC 2 cut(s) 637, 1645
GsuI CTGGAG 1 cut(s) 1029
HaeIII GGCC 4 cut(s) 300, 639, 1991, 2392
HapII CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1494, 2389
HgaI GACGC 3 cut(s) 92, 1002, 1911
HhaI GCGC 2 cut(s) 595, 1054
Hin1I GRCGYC 2 cut(s) 84, 1903
Hin6I GCGC 2 cut(s) 593, 1052
HinP1I GCGC 2 cut(s) 593, 1052
HincII GTYRAC 3 cut(s) 1017, 1264, 1500
HindII GTYRAC 3 cut(s) 1017, 1264, 1500
HindIII AAGCTT 3 cut(s) 383, 1416, 1622
HpaII CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1494, 2389
HphI GGTGA 7 cut(s) 302, 354, 790, 957, 2109, 2324, 2436
Hpy166II GTNNAC 6 cut(s) 668, 1017, 1077, 1090, 1264, 1500
Hpy188I TCNGA 8 cut(s) 97, 110, 460, 913, 1558, 1749, 2158, 2252
Hpy8I GTNNAC 6 cut(s) 668, 1017, 1077, 1090, 1264, 1500
Hpy99I CGWCG 2 cut(s) 1018, 1021
HpyAV CCTTC 9 cut(s) 434, 745, 1028, 1039, 1309, 1625, 2129, 2270, 2451
HpyCH4III ACNGT 5 cut(s) 101, 688, 885, 905, 1351
HpyCH4IV ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
HpyF10VI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
HpyF3I CTNAG 6 cut(s) 177, 457, 760, 910, 1307, 1964
HpySE526I ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
Hsp92I GRCGYC 2 cut(s) 84, 1903
HspAI GCGC 2 cut(s) 593, 1052
Ksp22I TGATCA 3 cut(s) 765, 820, 871
LguI GCTCTTC 2 cut(s) 1539, 2442
LmnI GCTCC 5 cut(s) 660, 692, 1010, 2065, 2510
Lsp1109I GCAGC 1 cut(s) 1631
LweI GCATC 2 cut(s) 21, 632
MaeI CTAG 8 cut(s) 60, 132, 152, 1710, 1929, 2049, 2186, 2484
MaeII ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
MaeIII GTNAC 7 cut(s) 349, 905, 1192, 1345, 2115, 2194, 2530
MbiI CCGCTC 2 cut(s) 663, 1171
MfeI CAATTG 1 cut(s) 2541
MflI RGATCY 2 cut(s) 1340, 1981
MlyI GAGTC 6 cut(s) 204, 752, 902, 1064, 2292, 2488
MmeI TCCRAC 5 cut(s) 172, 670, 1786, 1874, 2077
MroXI GAANNNNTTC 1 cut(s) 1743
MseI TTAA 4 cut(s) 1482, 1731, 1866, 1889
MslI CAYNNNNRTG 3 cut(s) 1097, 1394, 2362
MspI CCGG 7 cut(s) 168, 504, 548, 555, 1067, 1494, 2389
MspR9I CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1495
MunI CAATTG 1 cut(s) 2541
Mva1269I GAATGC 3 cut(s) 1165, 2215, 2346
MvaI CCWGG 2 cut(s) 754, 948
MwoI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
NciI CCSGG 4 cut(s) 168, 549, 556, 1495
NdeI CATATG 2 cut(s) 568, 2104
NlaIV GGNNCC 4 cut(s) 518, 553, 694, 2218
NmuCI GTSAC 4 cut(s) 905, 1192, 2115, 2530
NsbI TGCGCA 1 cut(s) 594
NspI RCATGY 2 cut(s) 1058, 2538
NspV TTCGAA 2 cut(s) 954, 1509
OliI CACNNNNGTG 1 cut(s) 2362
PagI TCATGA 2 cut(s) 1537, 1948
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 1 cut(s) 2534
PciSI GCTCTTC 2 cut(s) 1539, 2442
PctI GAATGC 3 cut(s) 1165, 2215, 2346
PdmI GAANNNNTTC 1 cut(s) 1743
PfeI GAWTC 8 cut(s) 263, 788, 956, 1816, 1955, 2300, 2315, 2429
PflMI CCANNNNNTGG 2 cut(s) 231, 336
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 2 cut(s) 638, 1646
PleI GAGTC 6 cut(s) 203, 752, 902, 1064, 2291, 2487
PmaCI CACGTG 2 cut(s) 939, 1085
PmlI CACGTG 2 cut(s) 939, 1085
PpsI GAGTC 6 cut(s) 203, 752, 902, 1064, 2291, 2487
Ppu21I YACGTR 2 cut(s) 939, 1085
PscI ACATGT 1 cut(s) 2534
PsiI TTATAA 3 cut(s) 1422, 1653, 2339
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 2 cut(s) 752, 946
PspCI CACGTG 2 cut(s) 939, 1085
PspGI CCWGG 2 cut(s) 752, 946
PspN4I GGNNCC 4 cut(s) 518, 553, 694, 2218
PspPI GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
PsuI RGATCY 2 cut(s) 1340, 1981
RsaI GTAC 5 cut(s) 328, 565, 608, 1884, 2539
RsaNI GTAC 5 cut(s) 327, 564, 607, 1883, 2538
RseI CAYNNNNRTG 3 cut(s) 1097, 1394, 2362
Rsr2I CGGWCCG 1 cut(s) 501
RsrII CGGWCCG 1 cut(s) 501
SalI GTCGAC 1 cut(s) 1015
SapI GCTCTTC 2 cut(s) 1539, 2442
SaqAI TTAA 4 cut(s) 1482, 1731, 1866, 1889
SatI GCNGC 2 cut(s) 637, 1645
Sau96I GGNCC 6 cut(s) 319, 339, 501, 638, 837, 890
ScaI AGTACT 1 cut(s) 1884
SchI GAGTC 6 cut(s) 204, 752, 902, 1064, 2292, 2488
ScrFI CCNGG 6 cut(s) 168, 549, 556, 754, 948, 1495
SfaNI GCATC 2 cut(s) 21, 632
SfuI TTCGAA 2 cut(s) 954, 1509
SgrDI CGTCGACG 1 cut(s) 1015
SinI GGWCC 5 cut(s) 319, 339, 501, 837, 890
SmiMI CAYNNNNRTG 3 cut(s) 1097, 1394, 2362
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
SseBI AGGCCT 1 cut(s) 300
SspMI CTAG 8 cut(s) 60, 132, 152, 1710, 1929, 2049, 2186, 2484
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 6 cut(s) 166, 547, 554, 752, 946, 1493
StyI CCWWGG 2 cut(s) 641, 1714
TaaI ACNGT 5 cut(s) 101, 688, 885, 905, 1351
TaiI ACGT 6 cut(s) 95, 192, 351, 941, 1022, 1087
TaqI TCGA 8 cut(s) 15, 281, 954, 1016, 1258, 1509, 1958, 2298
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 4 cut(s) 563, 606, 1882, 2537
TauI GCSGC 1 cut(s) 639
TfiI GAWTC 8 cut(s) 263, 788, 956, 1816, 1955, 2300, 2315, 2429
Tru1I TTAA 4 cut(s) 1482, 1731, 1866, 1889
Tru9I TTAA 4 cut(s) 1482, 1731, 1866, 1889
TscAI CASTG 5 cut(s) 261, 471, 768, 890, 1341
TseFI GTSAC 4 cut(s) 905, 1192, 2115, 2530
TseI GCWGC 1 cut(s) 1644
Tsp45I GTSAC 4 cut(s) 905, 1192, 2115, 2530
TspRI CASTG 5 cut(s) 261, 471, 768, 890, 1341
Van91I CCANNNNNTGG 2 cut(s) 231, 336
VpaK11BI GGWCC 5 cut(s) 319, 339, 501, 837, 890
XapI RAATTY 7 cut(s) 63, 172, 842, 1246, 1603, 2242, 2375
XbaI TCTAGA 1 cut(s) 59
XceI RCATGY 2 cut(s) 1058, 2538
XmiI GTMKAC 3 cut(s) 667, 1016, 1076
XmnI GAANNNNTTC 1 cut(s) 1743
XspI CTAG 8 cut(s) 60, 132, 152, 1710, 1929, 2049, 2186, 2484
ZrmI AGTACT 1 cut(s) 1884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.