Rorug02G0225800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
22151190 .. 22151609
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0225800.1

Sequence Viewer

Length: 351 bp
ATGAAATGGAAGGCACCTCCTCAGTGTTGGGTGAAGTTGAATTTTGATGGGGCCTATATTTTTGGGATTGGAAGAGCTGCTGTGGATTTCTTGGTTAGGGATGCTCAGGGCACTTTCTTAAGTGATGTTGGTAAAATAGTACACCATGTTCAATCAGCTGAACATGCTGAGCTTTTGGCTTGTAAGGAAGTGCAGTTGGCTTATAGAGATGTTCAGAACATATCAATGCTTGGGAGACTTTATGATGATATCAATGTTGAGTTACAACTCATGACCAGTTCAAGATTGGTTTATACTAGAAGGGAAGCAAATAAAGCTGCCCATACTTTGGTAGCTTATGGTGCTGCATAA

Protein Analysis

116

Amino Acids

13.0

Weight (kDa)

7.81

Isoelectric Point (pI)

28.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 13
AccB7I CCANNNNNTGG 1 cut(s) 328
AcsI RAATTY 1 cut(s) 40
AfaI GTAC 1 cut(s) 141
AfiI CCNNNNNNNGG 1 cut(s) 328
AflII CTTAAG 1 cut(s) 118
AgsI TTSAA 3 cut(s) 40, 152, 282
AluBI AGCT 5 cut(s) 77, 158, 172, 317, 335
AluI AGCT 5 cut(s) 77, 158, 172, 317, 335
Alw26I GTCTC 1 cut(s) 229
AoxI GGCC 1 cut(s) 51
ApeKI GCWGC 3 cut(s) 77, 317, 344
ApoI RAATTY 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 51
AsuHPI GGTGA 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 113
BanI GGYRCC 1 cut(s) 13
BbvI GCAGC 3 cut(s) 64, 304, 331
BccI CCATC 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 229
BfaI CTAG 1 cut(s) 297
BfrI CTTAAG 1 cut(s) 118
BisI GCNGC 3 cut(s) 78, 318, 345
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 3 cut(s) 79, 319, 346
BmgT120I GGNCC 1 cut(s) 51
BmiI GGNNCC 2 cut(s) 15, 52
BmsI GCATC 1 cut(s) 91
Bpu10I CCTNAGC 1 cut(s) 105
Bpu1102I GCTNAGC 1 cut(s) 168
Bsc4I CCNNNNNNNGG 1 cut(s) 328
Bse1I ACTGG 1 cut(s) 276
BseGI GGATG 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 328
BseMII CTCAG 3 cut(s) 35, 119, 159
BseNI ACTGG 1 cut(s) 276
BseRI GAGGAG 1 cut(s) 9
BseSI GKGCMC 1 cut(s) 113
BseXI GCAGC 3 cut(s) 64, 304, 331
BsgI GTGCAG 1 cut(s) 212
BshFI GGCC 1 cut(s) 53
BshNI GGYRCC 1 cut(s) 13
BslI CCNNNNNNNGG 1 cut(s) 328
BsmAI GTCTC 1 cut(s) 229
BsnI GGCC 1 cut(s) 53
Bsp1286I GDGCHC 1 cut(s) 113
Bsp1720I GCTNAGC 1 cut(s) 168
BspANI GGCC 1 cut(s) 53
BspCNI CTCAG 3 cut(s) 34, 118, 160
BspHI TCATGA 1 cut(s) 270
BspLI GGNNCC 2 cut(s) 15, 52
BspQI GCTCTTC 1 cut(s) 67
BspT107I GGYRCC 1 cut(s) 13
BspTI CTTAAG 1 cut(s) 118
BsrI ACTGG 1 cut(s) 276
Bst6I CTCTTC 1 cut(s) 67
BstAFI CTTAAG 1 cut(s) 118
BstDEI CTNAG 3 cut(s) 21, 105, 168
BstF5I GGATG 1 cut(s) 106
BstMAI GTCTC 1 cut(s) 229
BstMWI GCNNNNNNNGC 3 cut(s) 164, 314, 341
BstNSI RCATGY 1 cut(s) 167
BstSLI GKGCMC 1 cut(s) 113
BstV1I GCAGC 3 cut(s) 64, 304, 331
BsuRI GGCC 1 cut(s) 53
BtsCI GGATG 1 cut(s) 106
BtsIMutI CAGTG 1 cut(s) 29
CciI TCATGA 1 cut(s) 270
Cfr13I GGNCC 1 cut(s) 51
Csp6I GTAC 1 cut(s) 140
CviAII CATG 3 cut(s) 146, 164, 271
CviJI RGCY 8 cut(s) 53, 77, 158, 172, 179, 200, 317, 335
CviKI_1 RGCY 8 cut(s) 53, 77, 158, 172, 179, 200, 317, 335
CviQI GTAC 1 cut(s) 140
DdeI CTNAG 3 cut(s) 21, 105, 168
Eam1104I CTCTTC 1 cut(s) 67
EarI CTCTTC 1 cut(s) 67
Eco32I GATATC 1 cut(s) 250
EcoO109I RGGNCCY 1 cut(s) 51
EcoRV GATATC 1 cut(s) 250
FaeI CATG 3 cut(s) 149, 167, 274
FatI CATG 3 cut(s) 145, 163, 270
Fnu4HI GCNGC 3 cut(s) 78, 318, 345
FokI GGATG 1 cut(s) 113
Fsp4HI GCNGC 3 cut(s) 78, 318, 345
FspBI CTAG 1 cut(s) 297
GluI GCNGC 3 cut(s) 78, 318, 345
HaeIII GGCC 1 cut(s) 53
Hin1II CATG 3 cut(s) 149, 167, 274
HphI GGTGA 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 1 cut(s) 216
Hpy188III TCNNGA 2 cut(s) 271, 282
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 2 cut(s) 4, 294
HpyCH4V TGCA 2 cut(s) 193, 347
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 314, 341
HpyF3I CTNAG 3 cut(s) 21, 105, 168
Hsp92II CATG 3 cut(s) 149, 167, 274
LguI GCTCTTC 1 cut(s) 67
LpnPI CCDG 2 cut(s) 92, 289
Lsp1109I GCAGC 3 cut(s) 64, 304, 331
LweI GCATC 1 cut(s) 91
MaeI CTAG 1 cut(s) 297
MaeIII GTNAC 1 cut(s) 261
MboII GAAGA 1 cut(s) 84
MhlI GDGCHC 1 cut(s) 113
MluCI AATT 1 cut(s) 40
MnlI CCTC 2 cut(s) 27, 30
MseI TTAA 1 cut(s) 119
MslI CAYNNNNRTG 1 cut(s) 224
MspA1I CMGCKG 1 cut(s) 158
MspCI CTTAAG 1 cut(s) 118
MwoI GCNNNNNNNGC 3 cut(s) 164, 314, 341
NlaIII CATG 3 cut(s) 149, 167, 274
NlaIV GGNNCC 2 cut(s) 15, 52
NspI RCATGY 1 cut(s) 167
PagI TCATGA 1 cut(s) 270
PciSI GCTCTTC 1 cut(s) 67
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 3 cut(s) 79, 319, 346
PspN4I GGNNCC 2 cut(s) 15, 52
PspPI GGNCC 1 cut(s) 51
PsrI GAACNNNNNNTAC 2 cut(s) 132, 164
PvuII CAGCTG 1 cut(s) 158
RsaI GTAC 1 cut(s) 141
RsaNI GTAC 1 cut(s) 140
RseI CAYNNNNRTG 1 cut(s) 224
SapI GCTCTTC 1 cut(s) 67
SaqAI TTAA 1 cut(s) 119
SatI GCNGC 3 cut(s) 78, 318, 345
Sau96I GGNCC 1 cut(s) 51
SduI GDGCHC 1 cut(s) 113
SetI ASST 6 cut(s) 19, 79, 160, 174, 319, 337
SfaNI GCATC 1 cut(s) 91
SmiMI CAYNNNNRTG 1 cut(s) 224
SmlI CTYRAG 1 cut(s) 118
SmoI CTYRAG 1 cut(s) 118
Sse9I AATT 1 cut(s) 40
SspMI CTAG 1 cut(s) 297
TasI AATT 1 cut(s) 40
TatI WGTACW 1 cut(s) 139
Tru1I TTAA 1 cut(s) 119
Tru9I TTAA 1 cut(s) 119
TscAI CASTG 1 cut(s) 29
TseI GCWGC 3 cut(s) 77, 317, 344
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 29
Van91I CCANNNNNTGG 1 cut(s) 328
Vha464I CTTAAG 1 cut(s) 118
XapI RAATTY 1 cut(s) 40
XceI RCATGY 1 cut(s) 167
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XspI CTAG 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.