RLG00000033622

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
29686122 .. 29705212
19091 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033622

Sequence Viewer

Length: 2295 bp
ATGCACAACGGTAGAGAAGCATTGTGGCGGGGCGGCCCTTGGATCGGGGACAGCTGGAGCGGTCTACCTGTAATAACCGCTAACGTTGGAGTCTACAATACGAGTTTTGTCAACAATGAAGACGAGATATCCTTCGTGTATGCTGTTGCTAGGGACGCAATGATCACAAGGGGGGTGATAGATGAATCAGGAATATTTCAACTGTTCGCGTGGAATGATCAATGGATCAAATTCTACTTCTACCCCACTGAGTGGTGTGATGACTATGGACAGTGCGGTCCAAATACTAACTGTGACTCACATAAGGAGGTGGCTTGCACGTGCCTACCTGGGTTCAAATCCAAATCACCTCGTTTGACAGTTGGTGGGGCTGGGTGCATTAGAAAAGCGGAAGCGTCCACGTGTCAAAACGGAGAAGGGTTTGTGAAGGTGGCGAATGTAAAAGTACCGGACTCGTCTACTGCACGTGTGAACATGAGTATGAGTTTGGAAGGGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACGGCTTACACGAGTGCGGACAACCGGGCTGGTGGGATCGGATGTGTGACATGGCACGGGGACTTGATGGACATGAGGACTTTCTCCGATGTTGGTCAAGATTTATATGTTCGAGTCGATGCAACTTCTTTAGCTCAATATGAAAAGTCAGGTAGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGATGAAACAAGGAAAGCACTTTCAAGTTGGACAAGACGCTTCATGATTATCTTGGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTACAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTATTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTTGCAAAAAAAATGCTGGTTCCTATGAGAAGCATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGACAGAGCCGTGGAAATCATTGATTCATCTATAGAGCGAGAAAGTAGATCTAAAATCAATTCCTCTGCTCCCCCTTCTCCGAATTCCCGATCTGATTCAGCAGAGCGAAGCCCAGGTGTTGACAACGAAGTCTCCTTCACTATAGCCTATGACGCTGTGTTGATGACATTATCCGCTTCCCTCCGTAATACAAGCGAGTGGTACAATGAGACTACAACTTTGAGCAATGGGAATTCGGTTGAGTTCGATGGGTACATGAGGGTAGAAGTGGATACTGAGGTTCTTTACAGGGTAAAGACGAGAGTGGAAACGCCCGAAGCAGAACTCATTCGAGAAGTTGTTGATGAAATACAAAGGAAATTGGATTCCTCTTCTTCAGAACTTGCTGTTAAAAATCTGGCATCAACACATTCTTCGTCTTCTTCTTGTCGACAGAAGCATGATGTATTTTTAAGCTTCAGAGGGCAAGATACCCGCTTGACTTTTTTGAGAAATCTATATGATGCATTATATAAGCGCGAAATTTCCACATTTAGAGATGACAAAGATCTTGAGAAAGGAAAGTCTATTGGCCAACAACTTGACAAAGCAATTATAGAATCGAAAGTTTGGGTTGTCATTGTTTCACCAGACTATGCTTCTTCGAAATGGTGCTTGGATGAGCTTTTGAAGATTCTTGAATGCAGAAAAGCATCTAAAGTGGGAAAGAAGAATGAAAGTTTGATGAAGGCATTTGCAGAATATGAAGAACAAGCTCATCCTTTGGTGAATGGAGACAAAACACATAAGGGGAAGGCTAGTTTGCGGAAAAAGAAAAACATCACTAATCCTAATAAAAGGACAGAAGAAATAGTGGTTTCAGTAGACATTACTTATAATCAGCTTCTAGATCAATTGTATCATATTGTTGGAGTGGATCCAAATAAAAATGAGATCATGATCAGTACGATCGATGAATCAAAATCATTAGCTTATCATGTGGAGATATTGAATGATGATGACCTCAAAACTTTTATTGATCAAACCCTTTCTTCCGATGTGCACTTGAAGCATCCATTGCGGAATTCCACTGGGAGGTACTCTCGACTTTTAATTTTGTGA

Protein Analysis

765

Amino Acids

85.95

Weight (kDa)

6.36

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 9 - 115 2.9e-23 S-locus glycoprotein domain
PAN_2 PF08276 135 - 201 1.8e-22 PAN-like domain
Pkinase PF00069 264 - 377 3.4e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 269 - 376 1.5e-24 Protein tyrosine and serine/threonine kinase
TIR PF01582 544 - 631 1.3e-28 TIR domain
TIR_2 PF13676 547 - 628 1.3e-13 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2070
AasI GACNNNNNNGTC 2 cut(s) 276, 1322
AccB7I CCANNNNNTGG 1 cut(s) 252
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 5 cut(s) 64, 93, 458, 1624, 2058
AccII CGCG 2 cut(s) 209, 1713
AclI AACGTT 1 cut(s) 84
AclWI GGATC 6 cut(s) 50, 233, 572, 730, 2105, 2118
AcoI YGGCCR 1 cut(s) 1765
AcsI RAATTY 6 cut(s) 230, 1159, 1276, 1426, 1716, 2257
AcuI CTGAAG 3 cut(s) 1011, 1554, 1636
AcvI CACGTG 3 cut(s) 321, 402, 467
AdeI CACNNNGTG 1 cut(s) 252
AfaI GTAC 5 cut(s) 447, 1397, 1448, 2140, 2273
AfiI CCNNNNNNNGG 4 cut(s) 44, 252, 759, 2268
AflIII ACRYGT 3 cut(s) 401, 466, 1171
AjnI CCWGG 2 cut(s) 328, 1306
AjuI GAANNNNNNNTTGG 2 cut(s) 1832, 1864
AluBI AGCT 7 cut(s) 54, 662, 1650, 1858, 1949, 2077, 2165
AluI AGCT 7 cut(s) 54, 662, 1650, 1858, 1949, 2077, 2165
Alw21I GWGCWC 1 cut(s) 2238
Alw26I GTCTC 3 cut(s) 1330, 1397, 1962
Alw44I GTGCAC 1 cut(s) 2234
AlwI GGATC 6 cut(s) 50, 233, 572, 730, 2105, 2118
AoxI GGCC 3 cut(s) 34, 906, 1765
ApaLI GTGCAC 1 cut(s) 2234
ApoI RAATTY 6 cut(s) 230, 1159, 1276, 1426, 1716, 2257
ArsI GACNNNNNNTTYG 2 cut(s) 1396, 1428
Asp700I GAANNNNTTC 1 cut(s) 1521
AspLEI GCGC 1 cut(s) 1713
AspS9I GGNCC 2 cut(s) 35, 278
AsuC2I CCSGG 1 cut(s) 554
AsuHPI GGTGA 5 cut(s) 187, 339, 1026, 1812, 1972
AsuII TTCGAA 1 cut(s) 1838
AvaII GGWCC 1 cut(s) 278
BaeGI GKGCMC 1 cut(s) 2238
BaeI ACNNNNGTAYC 2 cut(s) 1458, 1491
BalI TGGCCA 1 cut(s) 1767
BamHI GGATCC 1 cut(s) 2110
BauI CACGAG 1 cut(s) 538
BbrPI CACGTG 3 cut(s) 321, 402, 467
BbsI GAAGAC 3 cut(s) 126, 1200, 1605
Bbv12I GWGCWC 1 cut(s) 2238
BccI CCATC 3 cut(s) 508, 589, 1436
BceAI ACGGC 2 cut(s) 546, 1187
BciT130I CCWGG 2 cut(s) 330, 1308
BciVI GTATCC 1 cut(s) 1459
BclI TGATCA 4 cut(s) 162, 217, 2133, 2212
BcnI CCSGG 1 cut(s) 554
BcoDI GTCTC 3 cut(s) 1330, 1397, 1962
BfaI CTAG 6 cut(s) 150, 846, 966, 1103, 1992, 2081
BfmI CTRYAG 2 cut(s) 1224, 1335
BfuI GTATCC 1 cut(s) 1459
BglII AGATCT 3 cut(s) 898, 1241, 1741
BisI GCNGC 1 cut(s) 34
BlsI GCNGC 1 cut(s) 35
Bme1390I CCNGG 3 cut(s) 330, 554, 1308
Bme18I GGWCC 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 35, 278
BmiI GGNNCC 2 cut(s) 1135, 2112
BmrFI CCNGG 3 cut(s) 330, 554, 1308
BmrI ACTGGG 1 cut(s) 2274
BmsI GCATC 6 cut(s) 637, 1156, 1604, 1687, 1895, 2254
BmuI ACTGGG 1 cut(s) 2274
BpiI GAAGAC 3 cut(s) 126, 1200, 1605
BplI GAGNNNNNCTC 2 cut(s) 2260, 2292
BpmI CTGGAG 1 cut(s) 76
Bpu14I TTCGAA 1 cut(s) 1838
BpuEI CTTGAG 1 cut(s) 1766
BpuMI CCSGG 1 cut(s) 554
Bsa29I ATCGAT 1 cut(s) 2145
BsaAI YACGTR 3 cut(s) 321, 402, 467
BsaBI GATNNNNATC 1 cut(s) 2132
BsaJI CCNNGG 4 cut(s) 38, 329, 1203, 1306
BsaWI WCCGGW 2 cut(s) 448, 1036
BsaXI ACNNNNNCTCC 2 cut(s) 1310, 1340
Bsc4I CCNNNNNNNGG 4 cut(s) 44, 252, 759, 2268
Bse1I ACTGG 1 cut(s) 2269
Bse3DI GCAATG 5 cut(s) 165, 919, 1053, 1426, 2249
Bse8I GATNNNNATC 1 cut(s) 2132
BseBI CCWGG 2 cut(s) 330, 1308
BseCI ATCGAT 1 cut(s) 2145
BseDI CCNNGG 4 cut(s) 38, 329, 1203, 1306
BseGI GGATG 6 cut(s) 575, 777, 1147, 1858, 1951, 2245
BseJI GATNNNNATC 1 cut(s) 2132
BseLI CCNNNNNNNGG 4 cut(s) 44, 252, 759, 2268
BseMI GCAATG 5 cut(s) 165, 919, 1053, 1426, 2249
BseMII CTCAG 2 cut(s) 240, 1461
BseNI ACTGG 1 cut(s) 2269
BseSI GKGCMC 1 cut(s) 2238
BseYI CCCAGC 1 cut(s) 371
BsgI GTGCAG 1 cut(s) 447
Bsh1236I CGCG 2 cut(s) 209, 1713
Bsh1285I CGRYCG 1 cut(s) 2145
BshFI GGCC 3 cut(s) 36, 908, 1767
BshVI ATCGAT 1 cut(s) 2145
BsiEI CGRYCG 1 cut(s) 2145
BsiHKAI GWGCWC 1 cut(s) 2238
BsiSI CCGG 3 cut(s) 449, 553, 1037
BslFI GGGAC 3 cut(s) 62, 167, 602
BslI CCNNNNNNNGG 4 cut(s) 44, 252, 759, 2268
BsmAI GTCTC 3 cut(s) 1330, 1397, 1962
BsmFI GGGAC 3 cut(s) 62, 167, 602
BsmI GAATGC 1 cut(s) 1880
BsnI GGCC 3 cut(s) 36, 908, 1767
Bsp119I TTCGAA 1 cut(s) 1838
Bsp1286I GDGCHC 1 cut(s) 2238
BspANI GGCC 3 cut(s) 36, 908, 1767
BspCNI CTCAG 2 cut(s) 241, 1462
BspDI ATCGAT 1 cut(s) 2145
BspFNI CGCG 2 cut(s) 209, 1713
BspHI TCATGA 3 cut(s) 825, 865, 2130
BspLI GGNNCC 2 cut(s) 1135, 2112
BspPI GGATC 6 cut(s) 50, 233, 572, 730, 2105, 2118
BspT104I TTCGAA 1 cut(s) 1838
BsrBI CCGCTC 1 cut(s) 60
BsrDI GCAATG 5 cut(s) 165, 919, 1053, 1426, 2249
BsrI ACTGG 1 cut(s) 2269
BssECI CCNNGG 4 cut(s) 38, 329, 1203, 1306
BssSI CACGAG 1 cut(s) 538
BssT1I CCWWGG 1 cut(s) 38
Bst2BI CACGAG 1 cut(s) 538
Bst2UI CCWGG 2 cut(s) 330, 1308
Bst4CI ACNGT 7 cut(s) 11, 204, 273, 293, 361, 733, 1059
Bst6I CTCTTC 1 cut(s) 1570
BstAPI GCANNNNNTGC 1 cut(s) 2251
BstBAI YACGTR 3 cut(s) 321, 402, 467
BstBI TTCGAA 1 cut(s) 1838
BstC8I GCNNGC 3 cut(s) 316, 708, 910
BstDEI CTNAG 4 cut(s) 249, 689, 881, 1470
BstDSI CCRYGG 1 cut(s) 1203
BstF5I GGATG 6 cut(s) 575, 777, 1147, 1858, 1951, 2245
BstFNI CGCG 2 cut(s) 209, 1713
BstHHI GCGC 1 cut(s) 1713
BstMAI GTCTC 3 cut(s) 1330, 1397, 1962
BstMCI CGRYCG 1 cut(s) 2145
BstMWI GCNNNNNNNGC 5 cut(s) 155, 707, 1346, 2242, 2251
BstNI CCWGG 2 cut(s) 330, 1308
BstNSI RCATGY 1 cut(s) 1175
BstSCI CCNGG 3 cut(s) 328, 552, 1306
BstSFI CTRYAG 2 cut(s) 1224, 1335
BstSLI GKGCMC 1 cut(s) 2238
BstUI CGCG 2 cut(s) 209, 1713
BstV2I GAAGAC 3 cut(s) 126, 1200, 1605
BstX2I RGATCY 5 cut(s) 722, 898, 1241, 1741, 2110
BstYI RGATCY 5 cut(s) 722, 898, 1241, 1741, 2110
Bsu15I ATCGAT 1 cut(s) 2145
BsuI GTATCC 1 cut(s) 1459
BsuRI GGCC 3 cut(s) 36, 908, 1767
BsuTUI ATCGAT 1 cut(s) 2145
BtgI CCRYGG 1 cut(s) 1203
BtsCI GGATG 6 cut(s) 575, 777, 1147, 1858, 1951, 2245
BtsIMutI CAGTG 3 cut(s) 246, 278, 2262
Cac8I GCNNGC 3 cut(s) 316, 708, 910
CciI TCATGA 3 cut(s) 825, 865, 2130
CfoI GCGC 1 cut(s) 1713
Cfr13I GGNCC 2 cut(s) 35, 278
ClaI ATCGAT 1 cut(s) 2145
CseI GACGC 4 cut(s) 164, 384, 828, 1355
Csp6I GTAC 5 cut(s) 446, 1396, 1447, 2139, 2272
CspCI CAANNNNNGTGG 2 cut(s) 990, 1025
CviQI GTAC 5 cut(s) 446, 1396, 1447, 2139, 2272
DdeI CTNAG 4 cut(s) 249, 689, 881, 1470
DraIII CACNNNGTG 1 cut(s) 252
DrdI GACNNNNNNGTC 2 cut(s) 276, 1322
DseDI GACNNNNNNGTC 2 cut(s) 276, 1322
EaeI YGGCCR 1 cut(s) 1765
Eam1104I CTCTTC 1 cut(s) 1570
EarI CTCTTC 1 cut(s) 1570
Eco130I CCWWGG 1 cut(s) 38
Eco32I GATATC 1 cut(s) 129
Eco47I GGWCC 1 cut(s) 278
Eco57I CTGAAG 3 cut(s) 1011, 1554, 1636
Eco72I CACGTG 3 cut(s) 321, 402, 467
EcoRI GAATTC 3 cut(s) 1276, 1426, 2257
EcoRII CCWGG 2 cut(s) 328, 1306
EcoRV GATATC 1 cut(s) 129
EcoT14I CCWWGG 1 cut(s) 38
EcoT22I ATGCAT 1 cut(s) 1702
ErhI CCWWGG 1 cut(s) 38
FaqI GGGAC 3 cut(s) 62, 167, 602
FauI CCCGC 2 cut(s) 21, 1676
FauNDI CATATG 1 cut(s) 1021
FbaI TGATCA 4 cut(s) 162, 217, 2133, 2212
FblI GTMKAC 5 cut(s) 64, 93, 458, 1624, 2058
Fnu4HI GCNGC 1 cut(s) 34
FokI GGATG 6 cut(s) 582, 784, 1134, 1865, 1938, 2232
Fsp4HI GCNGC 1 cut(s) 34
FspBI CTAG 6 cut(s) 150, 846, 966, 1103, 1992, 2081
GlaI GCGC 1 cut(s) 1712
GluI GCNGC 1 cut(s) 34
GsaI CCCAGC 1 cut(s) 375
GsuI CTGGAG 1 cut(s) 76
HaeIII GGCC 3 cut(s) 36, 908, 1767
HapII CCGG 3 cut(s) 449, 553, 1037
HgaI GACGC 4 cut(s) 164, 384, 828, 1355
HhaI GCGC 1 cut(s) 1713
Hin6I GCGC 1 cut(s) 1711
HinP1I GCGC 1 cut(s) 1711
HincII GTYRAC 3 cut(s) 112, 1315, 1625
HindII GTYRAC 3 cut(s) 112, 1315, 1625
HindIII AAGCTT 1 cut(s) 1648
HpaII CCGG 3 cut(s) 449, 553, 1037
HphI GGTGA 5 cut(s) 187, 339, 1026, 1812, 1972
Hpy188I TCNGA 8 cut(s) 569, 616, 1075, 1275, 1288, 1573, 1655, 2230
HpyCH4III ACNGT 7 cut(s) 11, 204, 273, 293, 361, 733, 1059
HpyCH4IV ACGT 4 cut(s) 84, 320, 401, 466
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 707, 1346, 2242, 2251
HpyF3I CTNAG 4 cut(s) 249, 689, 881, 1470
HpySE526I ACGT 4 cut(s) 84, 320, 401, 466
HspAI GCGC 1 cut(s) 1711
Ksp22I TGATCA 4 cut(s) 162, 217, 2133, 2212
LmnI GCTCC 3 cut(s) 57, 982, 1267
LweI GCATC 6 cut(s) 637, 1156, 1604, 1687, 1895, 2254
MaeI CTAG 6 cut(s) 150, 846, 966, 1103, 1992, 2081
MaeII ACGT 4 cut(s) 84, 320, 401, 466
MaeIII GTNAC 4 cut(s) 293, 574, 727, 1032
MbiI CCGCTC 1 cut(s) 60
MfeI CAATTG 1 cut(s) 2087
MflI RGATCY 5 cut(s) 722, 898, 1241, 1741, 2110
MhlI GDGCHC 1 cut(s) 2238
MlsI TGGCCA 1 cut(s) 1767
MluNI TGGCCA 1 cut(s) 1767
MlyI GAGTC 4 cut(s) 99, 290, 446, 651
MmeI TCCRAC 4 cut(s) 67, 791, 994, 2083
Mox20I TGGCCA 1 cut(s) 1767
Mph1103I ATGCAT 1 cut(s) 1702
MroXI GAANNNNTTC 1 cut(s) 1521
MscI TGGCCA 1 cut(s) 1767
MseI TTAA 3 cut(s) 1584, 1646, 2285
MslI CAYNNNNRTG 1 cut(s) 479
Msp20I TGGCCA 1 cut(s) 1767
MspA1I CMGCKG 1 cut(s) 54
MspI CCGG 3 cut(s) 449, 553, 1037
MspR9I CCNGG 3 cut(s) 330, 554, 1308
MunI CAATTG 1 cut(s) 2087
Mva1269I GAATGC 1 cut(s) 1880
MvaI CCWGG 2 cut(s) 330, 1308
MvnI CGCG 2 cut(s) 209, 1713
MwoI GCNNNNNNNGC 5 cut(s) 155, 707, 1346, 2242, 2251
NciI CCSGG 1 cut(s) 554
NdeI CATATG 1 cut(s) 1021
NlaIV GGNNCC 2 cut(s) 1135, 2112
NmuCI GTSAC 3 cut(s) 293, 574, 1032
NsiI ATGCAT 1 cut(s) 1702
NspI RCATGY 1 cut(s) 1175
NspV TTCGAA 1 cut(s) 1838
PagI TCATGA 3 cut(s) 825, 865, 2130
PciI ACATGT 1 cut(s) 1171
PcsI WCGNNNNNNNCGW 1 cut(s) 536
PctI GAATGC 1 cut(s) 1880
PdmI GAANNNNTTC 1 cut(s) 1521
PfeI GAWTC 8 cut(s) 185, 872, 1217, 1289, 1559, 1793, 1867, 2150
PflMI CCANNNNNTGG 1 cut(s) 252
PkrI GCNGC 1 cut(s) 35
Ple19I CGATCG 1 cut(s) 2145
PleI GAGTC 4 cut(s) 98, 290, 446, 650
PmaCI CACGTG 3 cut(s) 321, 402, 467
PmlI CACGTG 3 cut(s) 321, 402, 467
PpsI GAGTC 4 cut(s) 98, 290, 446, 650
Ppu21I YACGTR 3 cut(s) 321, 402, 467
PscI ACATGT 1 cut(s) 1171
PsiI TTATAA 1 cut(s) 2070
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 2 cut(s) 328, 1306
PspCI CACGTG 3 cut(s) 321, 402, 467
PspFI CCCAGC 1 cut(s) 371
PspGI CCWGG 2 cut(s) 328, 1306
PspN4I GGNNCC 2 cut(s) 1135, 2112
PspPI GGNCC 2 cut(s) 35, 278
PsuI RGATCY 5 cut(s) 722, 898, 1241, 1741, 2110
PvuI CGATCG 1 cut(s) 2145
PvuII CAGCTG 1 cut(s) 54
RsaI GTAC 5 cut(s) 447, 1397, 1448, 2140, 2273
RsaNI GTAC 5 cut(s) 446, 1396, 1447, 2139, 2272
RseI CAYNNNNRTG 1 cut(s) 479
SalI GTCGAC 1 cut(s) 1623
SaqAI TTAA 3 cut(s) 1584, 1646, 2285
SatI GCNGC 1 cut(s) 34
Sau96I GGNCC 2 cut(s) 35, 278
SchI GAGTC 4 cut(s) 99, 290, 446, 651
ScrFI CCNGG 3 cut(s) 330, 554, 1308
SduI GDGCHC 1 cut(s) 2238
SfaNI GCATC 6 cut(s) 637, 1156, 1604, 1687, 1895, 2254
SfcI CTRYAG 2 cut(s) 1224, 1335
SfuI TTCGAA 1 cut(s) 1838
SinI GGWCC 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 479
SmlI CTYRAG 1 cut(s) 1745
SmoI CTYRAG 1 cut(s) 1745
SspI AATATT 2 cut(s) 195, 972
SspMI CTAG 6 cut(s) 150, 846, 966, 1103, 1992, 2081
StyD4I CCNGG 3 cut(s) 328, 552, 1306
StyI CCWWGG 1 cut(s) 38
TaaI ACNGT 7 cut(s) 11, 204, 273, 293, 361, 733, 1059
TaiI ACGT 4 cut(s) 87, 323, 404, 469
TaqI TCGA 9 cut(s) 640, 645, 1440, 1525, 1624, 1796, 1838, 2145, 2278
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 8 cut(s) 185, 872, 1217, 1289, 1559, 1793, 1867, 2150
Tru1I TTAA 3 cut(s) 1584, 1646, 2285
Tru9I TTAA 3 cut(s) 1584, 1646, 2285
TscAI CASTG 3 cut(s) 253, 278, 2269
TseFI GTSAC 3 cut(s) 293, 574, 1032
Tsp45I GTSAC 3 cut(s) 293, 574, 1032
TspGWI ACGGA 2 cut(s) 426, 1367
TspRI CASTG 3 cut(s) 253, 278, 2269
Van91I CCANNNNNTGG 1 cut(s) 252
VneI GTGCAC 1 cut(s) 2234
VpaK11BI GGWCC 1 cut(s) 278
XapI RAATTY 6 cut(s) 230, 1159, 1276, 1426, 1716, 2257
XbaI TCTAGA 1 cut(s) 2080
XceI RCATGY 1 cut(s) 1175
XmiI GTMKAC 5 cut(s) 64, 93, 458, 1624, 2058
XmnI GAANNNNTTC 1 cut(s) 1521
XspI CTAG 6 cut(s) 150, 846, 966, 1103, 1992, 2081
Zsp2I ATGCAT 1 cut(s) 1702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.