Rroxscaffold_1G00070700

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000099
Physical Location & Seq
Forward (+)
91628827 .. 91632679
3853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070700.1

Sequence Viewer

Length: 2343 bp
ATGAAGTCTAAAAAATGGTTCATCAGATTAACCTTACTGTGTATCTTCATTGTTCTTCCATCTTGCATTTCAACTGAAACCATTACCCTAAACGAAGCAATCAAAGATGGCGATGTATTAGTCTCTAGCCGGAAAATTTTTGCACTTGGGTTCTTCAGCCCAGGAAATTCTGGTAAGCGTTATGTTGGAGTATGGTATAACCAAGTTCCTAACAAAACCATCGTTTGGGTTGCAAACAGGGACAATCCAGTCAATGATACCTCCGGATTCCTAGCAATTCAAGGAAATGGAGGCCTTGTCATCTACGGAAGTGAACGAAATATCCCTCTTTGGTCAGCTAATGTCTTTCTCTCTTCGCCAAACAGTTCCATTGCCAAGCTTCTGGATTCAGGAAATCTTGTGTTGCTTGAGAATGGGGATAGTCAAAGGGTGGTGTGGCAAGGCTTTGATTATCCCACAGATACATTGCTTCCATCTATGAAACTTGGGGTGGACCGACGGTCTGGGTTGAACCGGTCCCTCACATCTTGGAAGTCCCAAACTGACCCGGGAAAGGGGAACTGTTCATATTGGGTTGATCCAGGTGGGTTACAGATGATTCTTTACAAGGATGGAGCTCCAAGGTGGCGGTCCGAAATTGGATCTTGGACTGGCCAGAGATGGGGTGTTGAAACAACTTTTGTGAACAATGAAGATGAGGTCTCCGTGGTGACTATCCCTACCACCAATCAGTCAACATTCTCCAGGACAGTCCTAGATGAATCGGGAATTCTTGGACGGTTCATGTGGGACGATAGGCTACATCAATGGACTGACTATTGGTCTGCCCCTAAAGAGCGTTGTGATTTCTATGGACAATGTGGTCCAAATGGTAACTGTGACCCATACACTGTTGACACCACACTGATTACAATCGGTTGCAGCTGCTTGCCCGGGTATGAACCCAAGTCTCCGGAAGATTGGTATATGAGAGATGGGTCAGGTGGCTGTGTAAAGGAAACAGGAATATCCATGTGCTGGAGTGGGGAAGGGTTCGTGAAGGTGAAAAATGTAAAACTACCAGATTCGTCTCTGGCAAGTGTAGACATGAGTTTAAGTTTGAAAGAGTGTGAGCAAAAGTGCTTGAAAAATTGTTCTTGCACTGCATACTCAAGTGCCAATGAGAGCAGCAGAGAGGTTGGATGTGTGACATGGTATGGGGAATTGATGGACACATCAACTAATCCAGATGTCGGGCAAGATTTATATGTCCGTGTTGATGCAGCGGTGTTAGCTAAGCAAACACAAGAGAAATATATATTCCGAGCTAGCATGGAAGACTCCACTGGAGATCTTAATGATGAAAATACGATGAACTCAGACGTGCCATTCTTTGACCTGAGAACCATAGCAGCTACTACAGACAACTTTTCAGTTGCAAACAAGCTTGGAAATGGTGGCTTTGGCTCAGTATATAAGGGCATCCTTTGTAATGGAACGGAAATAGCAGTTAAAAGGCTGTCGAAGCATTCTGGCCAAGGTGTCAAAGAGTTTAAGAATGAAGTTGTGCTGATTGCAAAACTCCAACACAGGAACCTTGTAAGGATTCTAGGTTATTGTGTTCAAGATGAAGAAAAGATGCTCGTCTATGAATACGTGCCAAACAGAAGTTTGGACTTTTTCATTTTTGATGAAACAAAAAGAGCACTTTTAGATTGGACAAAACGCTTTGGGATAATTTGTGGAATTGCTAGAGGGATCTTATACCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGATCTAAAGGCGAGCAATATTCTACTTGATGGTTCCATGAATCCCAAAATTGCAGATTTTGGAATGGCTAGAATATTTAGTGGAGATCAAAGTGAAGCAAGTACAAGTCGTGTTGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTTTTCAGTAAAGTCTGATGTGTATAGTTTTGGCGTTTTACTACTCGAAATCATTACAGGCAAAAGGAATGCTGGTTATTACCATGAGAAGTATCCGGATTCAAATTTGGTTGGCCATGTTTGGGAGTTGTGGAAAGAAGGTAAAGTCTTGGAAATAGTTGATTCCTGTCTAGACGAAGCGTATCCTGTCAATGGGGTTCTCAGATGCATCCAAATTGCGCTCTTGTGCGTGCAAGAATTTGCAACGGACCGACCAACCATGCCAACTGTTGTTTTCATGTTAGGTAATGATGCTGCTCTTCCTTCAGCAAGACGACCTGCATTTTCAGTGAAGAGAATCTATTCTGATGGAGAGCTATCCGTAAATGATGTCACATGTACAATGGTAGAAGCTCGCTAA

Protein Analysis

780

Amino Acids

86.9

Weight (kDa)

5.45

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 178 3.2e-35 D-mannose binding lectin
S_locus_glycop PF00954 223 - 317 5.3e-18 S-locus glycoprotein domain
PAN_2 PF08276 339 - 405 8.9e-21 PAN-like domain
Pkinase PF00069 471 - 670 2.3e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 472 - 739 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 248, 861
Acc36I ACCTGC 1 cut(s) 2269
AccB7I CCANNNNNTGG 2 cut(s) 225, 1017
AccI GTMKAC 1 cut(s) 1083
AccIII TCCGGA 3 cut(s) 263, 952, 2038
AciI CCGC 2 cut(s) 628, 1265
AclWI GGATC 3 cut(s) 572, 649, 1745
AcoI YGGCCR 3 cut(s) 652, 1513, 2056
AcsI RAATTY 5 cut(s) 135, 166, 768, 2047, 2180
AcuI CTGAAG 2 cut(s) 139, 2232
AfaI GTAC 2 cut(s) 1885, 2323
AfiI CCNNNNNNNGG 8 cut(s) 225, 553, 554, 661, 1017, 1232, 2065, 2135
AflIII ACRYGT 1 cut(s) 2318
AgeI ACCGGT 1 cut(s) 513
AgsI TTSAA 9 cut(s) 72, 281, 511, 671, 1102, 1126, 1604, 1761, 2046
AhdI GACNNNNNGTC 2 cut(s) 499, 820
AjiI CACGTC 1 cut(s) 1363
AjnI CCWGG 3 cut(s) 160, 580, 743
AloI GAACNNNNNNTCC 2 cut(s) 306, 338
Alw21I GWGCWC 2 cut(s) 619, 1687
Alw26I GTCTC 4 cut(s) 127, 706, 954, 1074
AlwI GGATC 3 cut(s) 572, 649, 1745
Ama87I CYCGRG 2 cut(s) 547, 932
Aor13HI TCCGGA 3 cut(s) 263, 952, 2038
AoxI GGCC 4 cut(s) 292, 652, 1513, 2056
ApeKI GCWGC 6 cut(s) 921, 924, 1167, 1262, 1391, 2237
ApoI RAATTY 5 cut(s) 135, 166, 768, 2047, 2180
AsiGI ACCGGT 1 cut(s) 513
Asp700I GAANNNNTTC 1 cut(s) 2284
AspLEI GCGC 1 cut(s) 2164
AspS9I GGNCC 5 cut(s) 493, 516, 630, 863, 2191
AsuC2I CCSGG 4 cut(s) 548, 549, 933, 934
AsuHPI GGTGA 3 cut(s) 721, 1054, 1911
AsuNHI GCTAGC 1 cut(s) 1307
AvaI CYCGRG 2 cut(s) 547, 932
AvaII GGWCC 5 cut(s) 493, 516, 630, 863, 2191
BalI TGGCCA 3 cut(s) 654, 1515, 2058
BanII GRGCYC 1 cut(s) 619
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 2 cut(s) 619, 1687
BbvI GCAGC 6 cut(s) 911, 933, 1179, 1274, 1403, 2224
BciT130I CCWGG 3 cut(s) 162, 582, 745
BciVI GTATCC 2 cut(s) 2046, 2136
BcnI CCSGG 4 cut(s) 548, 549, 933, 934
BcoDI GTCTC 4 cut(s) 127, 706, 954, 1074
BfaI CTAG 8 cut(s) 126, 272, 755, 1308, 1589, 1731, 1851, 2114
BfmI CTRYAG 1 cut(s) 1398
BfuAI ACCTGC 1 cut(s) 2269
BfuI GTATCC 2 cut(s) 2046, 2136
BglII AGATCT 2 cut(s) 1330, 1783
BisI GCNGC 6 cut(s) 922, 925, 1168, 1263, 1392, 2238
BlpI GCTNAGC 1 cut(s) 1275
BlsI GCNGC 6 cut(s) 923, 926, 1169, 1264, 1393, 2239
Bme1390I CCNGG 7 cut(s) 162, 548, 549, 582, 745, 933, 934
Bme18I GGWCC 5 cut(s) 493, 516, 630, 863, 2191
BmeRI GACNNNNNGTC 2 cut(s) 499, 820
BmeT110I CYCGRG 2 cut(s) 547, 932
BmgBI CACGTC 1 cut(s) 1363
BmgT120I GGNCC 5 cut(s) 493, 516, 630, 863, 2191
BmiI GGNNCC 3 cut(s) 518, 1574, 1816
BmrFI CCNGG 7 cut(s) 162, 548, 549, 582, 745, 933, 934
BmsI GCATC 6 cut(s) 1249, 1470, 1608, 2138, 2160, 2224
BmtI GCTAGC 1 cut(s) 1311
BpiI GAAGAC 1 cut(s) 1323
BpmI CTGGAG 3 cut(s) 727, 1039, 1347
Bpu1102I GCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 2 cut(s) 428, 1135
BpuMI CCSGG 4 cut(s) 548, 549, 933, 934
BsaAI YACGTR 1 cut(s) 1636
BsaBI GATNNNNATC 1 cut(s) 911
BsaI GGTCTC 1 cut(s) 706
BsaJI CCNNGG 6 cut(s) 160, 547, 620, 705, 932, 1516
BsaWI WCCGGW 5 cut(s) 263, 513, 952, 1921, 2038
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bsc4I CCNNNNNNNGG 8 cut(s) 225, 553, 554, 661, 1017, 1232, 2065, 2135
Bse118I RCCGGY 1 cut(s) 513
Bse1I ACTGG 3 cut(s) 248, 655, 1330
Bse3DI GCAATG 3 cut(s) 369, 464, 1938
Bse8I GATNNNNATC 1 cut(s) 911
BseAI TCCGGA 3 cut(s) 263, 952, 2038
BseBI CCWGG 3 cut(s) 162, 582, 745
BseDI CCNNGG 6 cut(s) 160, 547, 620, 705, 932, 1516
BseGI GGATG 5 cut(s) 616, 1187, 1461, 1773, 2151
BseJI GATNNNNATC 1 cut(s) 911
BseLI CCNNNNNNNGG 8 cut(s) 225, 553, 554, 661, 1017, 1232, 2065, 2135
BseMI GCAATG 3 cut(s) 369, 464, 1938
BseMII CTCAG 4 cut(s) 1370, 1371, 1461, 2158
BseNI ACTGG 3 cut(s) 248, 655, 1330
BseXI GCAGC 6 cut(s) 911, 933, 1179, 1274, 1403, 2224
BshFI GGCC 4 cut(s) 294, 654, 1515, 2058
BshTI ACCGGT 1 cut(s) 513
BsiHKAI GWGCWC 2 cut(s) 619, 1687
BsiHKCI CYCGRG 2 cut(s) 547, 932
BsiSI CCGG 8 cut(s) 130, 264, 514, 548, 933, 953, 1922, 2039
BslFI GGGAC 4 cut(s) 254, 502, 520, 803
BslI CCNNNNNNNGG 8 cut(s) 225, 553, 554, 661, 1017, 1232, 2065, 2135
BsmAI GTCTC 4 cut(s) 127, 706, 954, 1074
BsmBI CGTCTC 1 cut(s) 1074
BsmFI GGGAC 4 cut(s) 254, 502, 520, 803
BsmI GAATGC 2 cut(s) 1507, 2017
BsnI GGCC 4 cut(s) 294, 654, 1515, 2058
Bso31I GGTCTC 1 cut(s) 706
BsoBI CYCGRG 2 cut(s) 547, 932
Bsp1286I GDGCHC 2 cut(s) 619, 1687
Bsp13I TCCGGA 3 cut(s) 263, 952, 2038
Bsp1407I TGTACA 1 cut(s) 2321
Bsp143I GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
Bsp1720I GCTNAGC 1 cut(s) 1275
BspACI CCGC 2 cut(s) 628, 1265
BspANI GGCC 4 cut(s) 294, 654, 1515, 2058
BspCNI CTCAG 4 cut(s) 1370, 1371, 1460, 2157
BspEI TCCGGA 3 cut(s) 263, 952, 2038
BspLI GGNNCC 3 cut(s) 518, 1574, 1816
BspMI ACCTGC 1 cut(s) 2269
BspOI GCTAGC 1 cut(s) 1311
BspPI GGATC 3 cut(s) 572, 649, 1745
BspQI GCTCTTC 1 cut(s) 2247
BspTNI GGTCTC 1 cut(s) 706
BsrDI GCAATG 3 cut(s) 369, 464, 1938
BsrFI RCCGGY 1 cut(s) 513
BsrGI TGTACA 1 cut(s) 2321
BsrI ACTGG 3 cut(s) 248, 655, 1330
BssAI RCCGGY 1 cut(s) 513
BssECI CCNNGG 6 cut(s) 160, 547, 620, 705, 932, 1516
BssMI GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
BssT1I CCWWGG 2 cut(s) 620, 1516
Bst2UI CCWGG 3 cut(s) 162, 582, 745
Bst6I CTCTTC 3 cut(s) 358, 2247, 2270
BstAUI TGTACA 1 cut(s) 2321
BstBAI YACGTR 1 cut(s) 1636
BstC8I GCNNGC 5 cut(s) 929, 1309, 1795, 2174, 2338
BstDEI CTNAG 5 cut(s) 1275, 1357, 1379, 1447, 2144
BstDSI CCRYGG 1 cut(s) 705
BstF5I GGATG 5 cut(s) 616, 1187, 1461, 1773, 2151
BstHHI GCGC 1 cut(s) 2164
BstKTI GATC 6 cut(s) 580, 644, 1333, 1740, 1786, 1870
BstMAI GTCTC 4 cut(s) 127, 706, 954, 1074
BstMBI GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
BstMWI GCNNNNNNNGC 2 cut(s) 1271, 1504
BstNI CCWGG 3 cut(s) 162, 582, 745
BstNSI RCATGY 1 cut(s) 2322
BstSCI CCNGG 7 cut(s) 160, 546, 547, 580, 743, 931, 932
BstSFI CTRYAG 1 cut(s) 1398
BstV1I GCAGC 6 cut(s) 911, 933, 1179, 1274, 1403, 2224
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 4 cut(s) 641, 1330, 1737, 1783
BstXI CCANNNNNNTGG 1 cut(s) 382
BstYI RGATCY 4 cut(s) 641, 1330, 1737, 1783
BsuI GTATCC 2 cut(s) 2046, 2136
BsuRI GGCC 4 cut(s) 294, 654, 1515, 2058
BtgI CCRYGG 1 cut(s) 705
BtgZI GCGATG 1 cut(s) 126
BtrI CACGTC 1 cut(s) 1363
BtsCI GGATG 5 cut(s) 616, 1187, 1461, 1773, 2151
BtsI GCAGTG 1 cut(s) 1140
BtsIMutI CAGTG 5 cut(s) 888, 902, 1140, 1323, 2277
BveI ACCTGC 1 cut(s) 2269
Cac8I GCNNGC 5 cut(s) 929, 1309, 1795, 2174, 2338
CfoI GCGC 1 cut(s) 2164
Cfr10I RCCGGY 1 cut(s) 513
Cfr13I GGNCC 5 cut(s) 493, 516, 630, 863, 2191
Cfr9I CCCGGG 2 cut(s) 547, 932
CpoI CGGWCCG 2 cut(s) 630, 2191
Csp6I GTAC 2 cut(s) 1884, 2322
CspAI ACCGGT 1 cut(s) 513
CspI CGGWCCG 2 cut(s) 630, 2191
CviQI GTAC 2 cut(s) 1884, 2322
DdeI CTNAG 5 cut(s) 1275, 1357, 1379, 1447, 2144
DpnI GATC 6 cut(s) 579, 643, 1332, 1739, 1785, 1869
DpnII GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
DrdI GACNNNNNNGTC 2 cut(s) 248, 861
DriI GACNNNNNGTC 2 cut(s) 499, 820
DseDI GACNNNNNNGTC 2 cut(s) 248, 861
EaeI YGGCCR 3 cut(s) 652, 1513, 2056
Eam1104I CTCTTC 3 cut(s) 358, 2247, 2270
Eam1105I GACNNNNNGTC 2 cut(s) 499, 820
EarI CTCTTC 3 cut(s) 358, 2247, 2270
Ecl136II GAGCTC 1 cut(s) 617
Eco130I CCWWGG 2 cut(s) 620, 1516
Eco147I AGGCCT 1 cut(s) 294
Eco24I GRGCYC 1 cut(s) 619
Eco31I GGTCTC 1 cut(s) 706
Eco47I GGWCC 5 cut(s) 493, 516, 630, 863, 2191
Eco53kI GAGCTC 1 cut(s) 617
Eco57I CTGAAG 2 cut(s) 139, 2232
Eco88I CYCGRG 2 cut(s) 547, 932
EcoICRI GAGCTC 1 cut(s) 617
EcoRI GAATTC 1 cut(s) 768
EcoRII CCWGG 3 cut(s) 160, 580, 743
EcoT14I CCWWGG 2 cut(s) 620, 1516
EcoT22I ATGCAT 1 cut(s) 2153
EcoT38I GRGCYC 1 cut(s) 619
ErhI CCWWGG 2 cut(s) 620, 1516
Esp3I CGTCTC 1 cut(s) 1074
FaqI GGGAC 4 cut(s) 254, 502, 520, 803
FauNDI CATATG 1 cut(s) 1906
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 6 cut(s) 922, 925, 1168, 1263, 1392, 2238
FokI GGATG 5 cut(s) 623, 1194, 1448, 1760, 2138
FriOI GRGCYC 1 cut(s) 619
Fsp4HI GCNGC 6 cut(s) 922, 925, 1168, 1263, 1392, 2238
FspBI CTAG 8 cut(s) 126, 272, 755, 1308, 1589, 1731, 1851, 2114
GlaI GCGC 1 cut(s) 2163
GluI GCNGC 6 cut(s) 922, 925, 1168, 1263, 1392, 2238
GsuI CTGGAG 3 cut(s) 727, 1039, 1347
HaeIII GGCC 4 cut(s) 294, 654, 1515, 2058
HapII CCGG 8 cut(s) 130, 264, 514, 548, 933, 953, 1922, 2039
HhaI GCGC 1 cut(s) 2164
Hin6I GCGC 1 cut(s) 2162
HinP1I GCGC 1 cut(s) 2162
HincII GTYRAC 2 cut(s) 735, 895
HindII GTYRAC 2 cut(s) 735, 895
HindIII AAGCTT 2 cut(s) 377, 1424
HpaII CCGG 8 cut(s) 130, 264, 514, 548, 933, 953, 1922, 2039
HphI GGTGA 3 cut(s) 721, 1054, 1911
Hpy166II GTNNAC 6 cut(s) 314, 493, 685, 735, 895, 1084
Hpy188I TCNGA 7 cut(s) 26, 634, 1304, 1360, 1960, 2147, 2290
Hpy8I GTNNAC 6 cut(s) 314, 493, 685, 735, 895, 1084
Hpy99I CGWCG 1 cut(s) 501
HpyAV CCTTC 6 cut(s) 1022, 1033, 1757, 1931, 2075, 2256
HpyCH4IV ACGT 2 cut(s) 1362, 1635
HpyF10VI GCNNNNNNNGC 2 cut(s) 1271, 1504
HpyF3I CTNAG 5 cut(s) 1275, 1357, 1379, 1447, 2144
HpySE526I ACGT 2 cut(s) 1362, 1635
HspAI GCGC 1 cut(s) 2162
Kpn2I TCCGGA 3 cut(s) 263, 952, 2038
Kzo9I GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
LguI GCTCTTC 1 cut(s) 2247
LmnI GCTCC 2 cut(s) 614, 622
Lsp1109I GCAGC 6 cut(s) 911, 933, 1179, 1274, 1403, 2224
LweI GCATC 6 cut(s) 1249, 1470, 1608, 2138, 2160, 2224
MaeI CTAG 8 cut(s) 126, 272, 755, 1308, 1589, 1731, 1851, 2114
MaeII ACGT 2 cut(s) 1362, 1635
MaeIII GTNAC 7 cut(s) 588, 709, 872, 878, 1186, 1917, 2314
MalI GATC 6 cut(s) 579, 643, 1332, 1739, 1785, 1869
MboI GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
MflI RGATCY 4 cut(s) 641, 1330, 1737, 1783
MhlI GDGCHC 2 cut(s) 619, 1687
MlsI TGGCCA 3 cut(s) 654, 1515, 2058
MluNI TGGCCA 3 cut(s) 654, 1515, 2058
MlyI GAGTC 1 cut(s) 1313
MmeI TCCRAC 4 cut(s) 166, 1159, 1588, 1879
MnlI CCTC 7 cut(s) 271, 284, 336, 530, 691, 1168, 1727
Mox20I TGGCCA 3 cut(s) 654, 1515, 2058
Mph1103I ATGCAT 1 cut(s) 2153
MroI TCCGGA 3 cut(s) 263, 952, 2038
MroXI GAANNNNTTC 1 cut(s) 2284
MscI TGGCCA 3 cut(s) 654, 1515, 2058
MseI TTAA 6 cut(s) 29, 1094, 1335, 1491, 1533, 1766
Msp20I TGGCCA 3 cut(s) 654, 1515, 2058
MspA1I CMGCKG 2 cut(s) 924, 1265
MspI CCGG 8 cut(s) 130, 264, 514, 548, 933, 953, 1922, 2039
MspR9I CCNGG 7 cut(s) 162, 548, 549, 582, 745, 933, 934
Mva1269I GAATGC 2 cut(s) 1507, 2017
MvaI CCWGG 3 cut(s) 162, 582, 745
MwoI GCNNNNNNNGC 2 cut(s) 1271, 1504
NciI CCSGG 4 cut(s) 548, 549, 933, 934
NdeI CATATG 1 cut(s) 1906
NdeII GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
NheI GCTAGC 1 cut(s) 1307
NlaIV GGNNCC 3 cut(s) 518, 1574, 1816
NmuCI GTSAC 5 cut(s) 709, 878, 1186, 1917, 2314
NsiI ATGCAT 1 cut(s) 2153
NspI RCATGY 1 cut(s) 2322
PceI AGGCCT 1 cut(s) 294
PciI ACATGT 1 cut(s) 2318
PciSI GCTCTTC 1 cut(s) 2247
PctI GAATGC 2 cut(s) 1507, 2017
PdmI GAANNNNTTC 1 cut(s) 2284
PflMI CCANNNNNTGG 2 cut(s) 225, 1017
PfoI TCCNGGA 1 cut(s) 743
PinAI ACCGGT 1 cut(s) 513
PkrI GCNGC 6 cut(s) 923, 926, 1169, 1264, 1393, 2239
PleI GAGTC 1 cut(s) 1313
PpsI GAGTC 1 cut(s) 1313
Ppu21I YACGTR 1 cut(s) 1636
PscI ACATGT 1 cut(s) 2318
Psp124BI GAGCTC 1 cut(s) 619
Psp6I CCWGG 3 cut(s) 160, 580, 743
PspGI CCWGG 3 cut(s) 160, 580, 743
PspN4I GGNNCC 3 cut(s) 518, 1574, 1816
PspPI GGNCC 5 cut(s) 493, 516, 630, 863, 2191
PsuI RGATCY 4 cut(s) 641, 1330, 1737, 1783
PvuII CAGCTG 1 cut(s) 924
RsaI GTAC 2 cut(s) 1885, 2323
RsaNI GTAC 2 cut(s) 1884, 2322
Rsr2I CGGWCCG 2 cut(s) 630, 2191
RsrII CGGWCCG 2 cut(s) 630, 2191
SacI GAGCTC 1 cut(s) 619
SapI GCTCTTC 1 cut(s) 2247
SaqAI TTAA 6 cut(s) 29, 1094, 1335, 1491, 1533, 1766
SatI GCNGC 6 cut(s) 922, 925, 1168, 1263, 1392, 2238
Sau3AI GATC 6 cut(s) 577, 641, 1330, 1737, 1783, 1867
Sau96I GGNCC 5 cut(s) 493, 516, 630, 863, 2191
SchI GAGTC 1 cut(s) 1313
ScrFI CCNGG 7 cut(s) 162, 548, 549, 582, 745, 933, 934
SduI GDGCHC 2 cut(s) 619, 1687
SfaNI GCATC 6 cut(s) 1249, 1470, 1608, 2138, 2160, 2224
SfcI CTRYAG 1 cut(s) 1398
SinI GGWCC 5 cut(s) 493, 516, 630, 863, 2191
SmaI CCCGGG 2 cut(s) 549, 934
SmlI CTYRAG 2 cut(s) 407, 1150
SmoI CTYRAG 2 cut(s) 407, 1150
SseBI AGGCCT 1 cut(s) 294
SsiI CCGC 2 cut(s) 628, 1265
SspI AATATT 2 cut(s) 1801, 1857
SspMI CTAG 8 cut(s) 126, 272, 755, 1308, 1589, 1731, 1851, 2114
SstI GAGCTC 1 cut(s) 619
StuI AGGCCT 1 cut(s) 294
StyD4I CCNGG 7 cut(s) 160, 546, 547, 580, 743, 931, 932
StyI CCWWGG 2 cut(s) 620, 1516
TaiI ACGT 2 cut(s) 1365, 1638
TaqI TCGA 2 cut(s) 1502, 1989
TaqII GACCGA 2 cut(s) 510, 2208
TatI WGTACW 2 cut(s) 1883, 2321
Tru1I TTAA 6 cut(s) 29, 1094, 1335, 1491, 1533, 1766
Tru9I TTAA 6 cut(s) 29, 1094, 1335, 1491, 1533, 1766
TscAI CASTG 5 cut(s) 895, 909, 1147, 1330, 2277
TseFI GTSAC 5 cut(s) 709, 878, 1186, 1917, 2314
TseI GCWGC 6 cut(s) 921, 924, 1167, 1262, 1391, 2237
Tsp45I GTSAC 5 cut(s) 709, 878, 1186, 1917, 2314
TspGWI ACGGA 6 cut(s) 321, 694, 1241, 1493, 2204, 2293
TspMI CCCGGG 2 cut(s) 547, 932
TspRI CASTG 5 cut(s) 895, 909, 1147, 1330, 2277
Van91I CCANNNNNTGG 2 cut(s) 225, 1017
VpaK11BI GGWCC 5 cut(s) 493, 516, 630, 863, 2191
XapI RAATTY 5 cut(s) 135, 166, 768, 2047, 2180
XbaI TCTAGA 1 cut(s) 2113
XceI RCATGY 1 cut(s) 2322
XmaI CCCGGG 2 cut(s) 547, 932
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 2284
XspI CTAG 8 cut(s) 126, 272, 755, 1308, 1589, 1731, 1851, 2114
Zsp2I ATGCAT 1 cut(s) 2153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.