FvH4_3g22321

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000264
Physical Location & Seq
Forward (+)
15344620 .. 15347242
2623 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g22321.t1

Sequence Viewer

Length: 2145 bp
ATGTTCGACCATTCCTCTCAGTCCAAAAGGCCAAAGCTTTCTCTGTTCAAGGAGACTCCACCGGACACGATGGTAGAAGAGCAACAAGACGCGGCCATGGTTTCTTCAACTGGTGGAGACCCATTTCGTAAAAAGGCCCACTTTCTCAAACCCATTCTCCCTTCTTCCTCCATTCATGTACCTCCTCTCAAACTACCTCTCTCTTTCTCCTCCCTCCCTTCTTGTTTCGACCCAAAAGGCTGGCCTTTGAAGCTTCATTTTCCCGGGTGGCGTCTCGACCACTATGATTTGCAGACGTGGGTCCAACACTTGGCCCCTGTTTACCAATCTATATGGAAGAAAGCTGGTATCTTTGAAGCCATCTTGAGTTCCACTTATGAAATCAAAAAGAAAAAGGATTTAGTTTTTGGGTTAGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATTTTCCCTTGGGGTGAAGCAACAATCACATTGGAGGATGTTATGGTTTTGGGAGGCTTCTCTGTTTTGGGGGACTCTATTTTCAGCCCTCTTGAAAGCAGAGAGCTGAGAGAAGTTGAAGAGAAACTCGAGAAAGAGCGAAAAGGACTTTTCGATTACTCTCTTGGGTGTGCCTATGCTTGCACAAGGGTGTGGATGCAGAAATTTATGAAGAGTGGGAGTGAACTAGAGCATGAAGCATTCCTTGTGTTTTGGCTGTCCAGGTATGTTTTTAGACATCAATTTTTAGTGAGTAAGGCTGTGATTTCCACTGCGGTTCGTTTAGCTAGGGGGATCCGAATTGCGCTGGCACCCGCTGTTCTTGCCAGCATTTATAGAGATATGAGCTTGTTGAAATGGACTCTTGTATCAGATGAATTCAAAAACTGCGATGATGCCTTAAAACTCACCATTAACTCACCGTTTCATTTAGTTCAGGTTTGGGCATGGGAAAGGTTTCTAGAACTTAGGCCAAAACCCAATGTTATAAGCTGTGGTGAGCCAAGGTTGGTTCGATGGGATAAAGTAGATGGTATGAATGTTGAAAATTGGAGGAGAGTTATAGACTCTTCCGGGGAAGATTTCATGTGGCGCCCTTATGCCATGGCCATTGACAACTGGAATCCTAGATACTATTTGGAAAAGGAAATGTGGGTTTGTCCTGGTTTTGATGATGAACTCCTGTCATTTGCCATATGCTTGAGGGTGACTGAGTTAGATGGATTCGGTACTACTGCGCAATACCTTCCTCATAGAGTAGCTAGGCAATTTGGATTTGACCAAGACATTCCTTGTTTAGTTGCTAGGTCCAATATGCACTGTGGAAAAGAAGATCCTCATAGAGCCTGGAAACGTCAAATTAGGGAAATTAAGAATGTAAAGTTGTATATTCCATCTAGGCTTTCTGAAGCAGATGTGAGCACAAGATACCTAAAATGGTGGGAGGAAACAGTGTCAAGTATCAAGCATATAAGTGAACCTAGCATGCCACAGATAAAGAAAGCCAACGGTACTCACAGTTTACCAGCAAAGGATAAACATTGCCCCTTACTTCCTGGGATTCTACCGAAGAAAGTTGTGGAAGGTTTGAAAGAAAGTAACACGATTACTGATTTCACCATCTCTTCTGGTTCTTACCTAAAGAATTCAGAAAAACCACCGCATGTCTCAGACGGAAGCAATGAGAGTAATGATTCCTTTTTTCCTCCAGGGTTTGCTCCCAGAGGTAATAGGATTGAAGATGGAAATCCTATGAGCAAACATGAAAATGTCGAAACTAGGAAACATGGTGATAGCAAGAAGTTATCAGGTGGAGTTCAGAATTCAGCACCTTCAGTTTCCTTTCAAGGTTCTAATAACTGTATGCAATCAGAAAAAATTGAGAAAGAGATAAGCTTGAGTGAAGGTTTGCTTGGAGGATCCAAGGCCAAGCCGAATGTTGAAACTATAAAGGGGTGTACTACAAGAAGTCAAGCCATGAACACTGAAAGCATCACGGCCAATAATTGTGCTTGCAGTAGCTCTTTATTGGAGATACTGCTTACCATAAAAGAGTTCCAGAACCAGTTCTCGGAACTTAAAGCAAAGGTTAGCAGGCTTGAAACTATGGTGGGCGTATCACAAGCAAACACTAATGGATCGAGTTTTAGGAATAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

715

Amino Acids

80.93

Weight (kDa)

8.42

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 116 - 477 1.8e-110 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
Acc16I TGCGCA 1 cut(s) 1224
AccB1I GGYRCC 2 cut(s) 796, 1077
AccB7I CCANNNNNTGG 1 cut(s) 310
AccII CGCG 1 cut(s) 92
AciI CCGC 4 cut(s) 92, 761, 801, 1646
AclWI GGATC 6 cut(s) 775, 788, 1313, 1899, 1912, 2131
AcoI YGGCCR 3 cut(s) 93, 1092, 1983
AcsI RAATTY 4 cut(s) 650, 863, 1630, 1807
AcuI CTGAAG 2 cut(s) 1413, 1803
AcyI GRCGYC 2 cut(s) 271, 1078
AfaI GTAC 4 cut(s) 180, 1216, 1498, 1945
AfiI CCNNNNNNNGG 2 cut(s) 310, 2056
AjiI CACGTC 1 cut(s) 297
AjnI CCWGG 5 cut(s) 707, 1147, 1331, 1540, 1693
AjuI GAANNNNNNNTTGG 2 cut(s) 1881, 1913
AleI CACNNNNGTG 1 cut(s) 635
Alw21I GWGCWC 1 cut(s) 1409
Alw26I GTCTC 5 cut(s) 47, 111, 278, 428, 1657
AlwI GGATC 6 cut(s) 775, 788, 1313, 1899, 1912, 2131
Ama87I CYCGRG 2 cut(s) 263, 575
AoxI GGCC 9 cut(s) 29, 93, 135, 242, 312, 956, 1092, 1911, 1983
ApoI RAATTY 4 cut(s) 650, 863, 1630, 1807
Asp700I GAANNNNTTC 2 cut(s) 942, 2051
AspLEI GCGC 3 cut(s) 793, 1080, 1225
AspS9I GGNCC 4 cut(s) 136, 301, 313, 1293
AsuC2I CCSGG 3 cut(s) 264, 265, 1060
AsuHPI GGTGA 7 cut(s) 473, 886, 897, 995, 1204, 1594, 1787
AvaI CYCGRG 2 cut(s) 263, 575
AvaII GGWCC 2 cut(s) 301, 1293
BaeI ACNNNNGTAYC 2 cut(s) 837, 870
BalI TGGCCA 1 cut(s) 1094
BamHI GGATCC 2 cut(s) 780, 1904
BanI GGYRCC 2 cut(s) 796, 1077
Bbv12I GWGCWC 1 cut(s) 1409
BccI CCATC 8 cut(s) 64, 368, 996, 1010, 1199, 1387, 1613, 1721
BceAI ACGGC 1 cut(s) 1998
BciT130I CCWGG 5 cut(s) 709, 1149, 1333, 1542, 1695
BcnI CCSGG 3 cut(s) 264, 265, 1060
BcoDI GTCTC 5 cut(s) 47, 111, 278, 428, 1657
BfaI CTAG 9 cut(s) 674, 774, 947, 1113, 1248, 1290, 1383, 1467, 1764
BfoI RGCGCY 1 cut(s) 1081
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
Bme1390I CCNGG 8 cut(s) 264, 265, 709, 1060, 1149, 1333, 1542, 1695
Bme18I GGWCC 2 cut(s) 301, 1293
BmeT110I CYCGRG 2 cut(s) 263, 575
BmgBI CACGTC 1 cut(s) 297
BmgT120I GGNCC 4 cut(s) 136, 301, 313, 1293
BmiI GGNNCC 6 cut(s) 302, 315, 782, 798, 1079, 1906
BmrFI CCNGG 8 cut(s) 264, 265, 709, 1060, 1149, 1333, 1542, 1695
BmsI GCATC 3 cut(s) 633, 871, 1986
BoxI GACNNNNGTC 1 cut(s) 299
BpmI CTGGAG 1 cut(s) 1677
BpuEI CTTGAG 3 cut(s) 385, 1207, 1903
BpuMI CCSGG 3 cut(s) 264, 265, 1060
BsaBI GATNNNNATC 1 cut(s) 1731
BsaHI GRCGYC 2 cut(s) 271, 1078
BsaI GGTCTC 2 cut(s) 111, 428
BsaJI CCNNGG 9 cut(s) 96, 263, 455, 989, 1059, 1089, 1541, 1694, 1908
BsaWI WCCGGW 1 cut(s) 61
BsaXI ACNNNNNCTCC 2 cut(s) 141, 171
Bsc4I CCNNNNNNNGG 2 cut(s) 310, 2056
Bse1I ACTGG 3 cut(s) 115, 1109, 2050
Bse3DI GCAATG 2 cut(s) 1525, 1672
Bse8I GATNNNNATC 1 cut(s) 1731
BseBI CCWGG 5 cut(s) 709, 1149, 1333, 1542, 1695
BseDI CCNNGG 9 cut(s) 96, 263, 455, 989, 1059, 1089, 1541, 1694, 1908
BseGI GGATG 2 cut(s) 490, 648
BseJI GATNNNNATC 1 cut(s) 1731
BseLI CCNNNNNNNGG 2 cut(s) 310, 2056
BseMI GCAATG 2 cut(s) 1525, 1672
BseMII CTCAG 4 cut(s) 32, 545, 1188, 1668
BseNI ACTGG 3 cut(s) 115, 1109, 2050
BseRI GAGGAG 3 cut(s) 174, 199, 1054
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 9 cut(s) 31, 95, 137, 244, 314, 958, 1094, 1913, 1985
BshNI GGYRCC 2 cut(s) 796, 1077
BsiHKAI GWGCWC 1 cut(s) 1409
BsiHKCI CYCGRG 2 cut(s) 263, 575
BsiSI CCGG 3 cut(s) 62, 264, 1059
BslFI GGGAC 1 cut(s) 533
BslI CCNNNNNNNGG 2 cut(s) 310, 2056
BsmAI GTCTC 5 cut(s) 47, 111, 278, 428, 1657
BsmBI CGTCTC 1 cut(s) 278
BsmFI GGGAC 1 cut(s) 533
BsmI GAATGC 1 cut(s) 686
BsnI GGCC 9 cut(s) 31, 95, 137, 244, 314, 958, 1094, 1913, 1985
Bso31I GGTCTC 2 cut(s) 111, 428
BsoBI CYCGRG 2 cut(s) 263, 575
Bsp1286I GDGCHC 1 cut(s) 1409
Bsp143I GATC 4 cut(s) 780, 1318, 1904, 2123
Bsp19I CCATGG 2 cut(s) 96, 1089
BspACI CCGC 4 cut(s) 92, 761, 801, 1646
BspANI GGCC 9 cut(s) 31, 95, 137, 244, 314, 958, 1094, 1913, 1985
BspCNI CTCAG 4 cut(s) 31, 546, 1189, 1667
BspFNI CGCG 1 cut(s) 92
BspLI GGNNCC 6 cut(s) 302, 315, 782, 798, 1079, 1906
BspPI GGATC 6 cut(s) 775, 788, 1313, 1899, 1912, 2131
BspQI GCTCTTC 1 cut(s) 72
BspT107I GGYRCC 2 cut(s) 796, 1077
BspTNI GGTCTC 2 cut(s) 111, 428
BsrDI GCAATG 2 cut(s) 1525, 1672
BsrI ACTGG 3 cut(s) 115, 1109, 2050
BssECI CCNNGG 9 cut(s) 96, 263, 455, 989, 1059, 1089, 1541, 1694, 1908
BssMI GATC 4 cut(s) 780, 1318, 1904, 2123
BssNI GRCGYC 2 cut(s) 271, 1078
BssT1I CCWWGG 5 cut(s) 96, 455, 989, 1089, 1908
Bst2UI CCWGG 5 cut(s) 709, 1149, 1333, 1542, 1695
Bst4CI ACNGT 6 cut(s) 909, 1307, 1438, 1496, 1505, 1847
Bst6I CTCTTC 5 cut(s) 72, 561, 653, 1060, 1615
BstACI GRCGYC 2 cut(s) 271, 1078
BstC8I GCNNGC 7 cut(s) 242, 628, 795, 814, 1472, 1999, 2081
BstDEI CTNAG 5 cut(s) 18, 554, 953, 1197, 1654
BstDSI CCRYGG 2 cut(s) 96, 1089
BstF5I GGATG 2 cut(s) 490, 648
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 1081
BstHHI GCGC 3 cut(s) 793, 1080, 1225
BstKTI GATC 4 cut(s) 783, 1321, 1907, 2126
BstMAI GTCTC 5 cut(s) 47, 111, 278, 428, 1657
BstMBI GATC 4 cut(s) 780, 1318, 1904, 2123
BstMWI GCNNNNNNNGC 2 cut(s) 250, 809
BstNI CCWGG 5 cut(s) 709, 1149, 1333, 1542, 1695
BstNSI RCATGY 2 cut(s) 1474, 1652
BstPAI GACNNNNGTC 1 cut(s) 299
BstSCI CCNGG 8 cut(s) 262, 263, 707, 1058, 1147, 1331, 1540, 1693
BstUI CGCG 1 cut(s) 92
BstX2I RGATCY 3 cut(s) 780, 1318, 1904
BstXI CCANNNNNNTGG 1 cut(s) 240
BstYI RGATCY 3 cut(s) 780, 1318, 1904
BsuRI GGCC 9 cut(s) 31, 95, 137, 244, 314, 958, 1094, 1913, 1985
BtgI CCRYGG 2 cut(s) 96, 1089
BtgZI GCGATG 1 cut(s) 891
BtrI CACGTC 1 cut(s) 297
BtsCI GGATG 2 cut(s) 490, 648
BtsI GCAGTG 1 cut(s) 756
BtsIMutI CAGTG 4 cut(s) 756, 1303, 1443, 1968
Cac8I GCNNGC 7 cut(s) 242, 628, 795, 814, 1472, 1999, 2081
CfoI GCGC 3 cut(s) 793, 1080, 1225
Cfr13I GGNCC 4 cut(s) 136, 301, 313, 1293
Cfr9I CCCGGG 1 cut(s) 263
CseI GACGC 2 cut(s) 98, 260
Csp6I GTAC 4 cut(s) 179, 1215, 1497, 1944
CviQI GTAC 4 cut(s) 179, 1215, 1497, 1944
DdeI CTNAG 5 cut(s) 18, 554, 953, 1197, 1654
DinI GGCGCC 1 cut(s) 1079
DpnI GATC 4 cut(s) 782, 1320, 1906, 2125
DpnII GATC 4 cut(s) 780, 1318, 1904, 2123
EaeI YGGCCR 3 cut(s) 93, 1092, 1983
Eam1104I CTCTTC 5 cut(s) 72, 561, 653, 1060, 1615
EarI CTCTTC 5 cut(s) 72, 561, 653, 1060, 1615
Eco130I CCWWGG 5 cut(s) 96, 455, 989, 1089, 1908
Eco31I GGTCTC 2 cut(s) 111, 428
Eco47I GGWCC 2 cut(s) 301, 1293
Eco57I CTGAAG 2 cut(s) 1413, 1803
Eco88I CYCGRG 2 cut(s) 263, 575
EcoRI GAATTC 3 cut(s) 863, 1630, 1807
EcoRII CCWGG 5 cut(s) 707, 1147, 1331, 1540, 1693
EcoT14I CCWWGG 5 cut(s) 96, 455, 989, 1089, 1908
EgeI GGCGCC 1 cut(s) 1079
EheI GGCGCC 1 cut(s) 1079
ErhI CCWWGG 5 cut(s) 96, 455, 989, 1089, 1908
Esp3I CGTCTC 1 cut(s) 278
FalI AAGNNNNNCTT 6 cut(s) 125, 157, 675, 707, 1881, 1913
FaqI GGGAC 1 cut(s) 533
FauI CCCGC 1 cut(s) 808
FauNDI CATATG 1 cut(s) 1181
Fnu4HI GCNGC 1 cut(s) 93
FokI GGATG 2 cut(s) 497, 655
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 9 cut(s) 674, 774, 947, 1113, 1248, 1290, 1383, 1467, 1764
FspI TGCGCA 1 cut(s) 1224
GlaI GCGC 3 cut(s) 792, 1079, 1224
GluI GCNGC 1 cut(s) 93
GsuI CTGGAG 1 cut(s) 1677
HaeII RGCGCY 1 cut(s) 1081
HaeIII GGCC 9 cut(s) 31, 95, 137, 244, 314, 958, 1094, 1913, 1985
HapII CCGG 3 cut(s) 62, 264, 1059
HgaI GACGC 2 cut(s) 98, 260
HhaI GCGC 3 cut(s) 793, 1080, 1225
Hin1I GRCGYC 2 cut(s) 271, 1078
Hin6I GCGC 3 cut(s) 791, 1078, 1223
HinP1I GCGC 3 cut(s) 791, 1078, 1223
HindIII AAGCTT 3 cut(s) 35, 251, 1879
HinfI GANTC 8 cut(s) 55, 521, 847, 1052, 1108, 1209, 1546, 1679
HpaII CCGG 3 cut(s) 62, 264, 1059
HphI GGTGA 7 cut(s) 473, 886, 897, 995, 1204, 1594, 1787
Hpy166II GTNNAC 5 cut(s) 322, 671, 1463, 1508, 1944
Hpy188I TCNGA 8 cut(s) 785, 859, 1393, 1636, 1657, 1806, 1858, 2059
Hpy188III TCNNGA 6 cut(s) 275, 364, 539, 577, 947, 2044
Hpy8I GTNNAC 5 cut(s) 322, 671, 1463, 1508, 1944
HpyAV CCTTC 7 cut(s) 171, 228, 454, 1241, 1562, 1827, 1883
HpyCH4III ACNGT 6 cut(s) 909, 1307, 1438, 1496, 1505, 1847
HpyCH4IV ACGT 2 cut(s) 296, 1339
HpyCH4V TGCA 6 cut(s) 292, 630, 646, 1303, 1852, 2001
HpyF10VI GCNNNNNNNGC 2 cut(s) 250, 809
HpyF3I CTNAG 5 cut(s) 18, 554, 953, 1197, 1654
HpySE526I ACGT 2 cut(s) 296, 1339
Hsp92I GRCGYC 2 cut(s) 271, 1078
HspAI GCGC 3 cut(s) 791, 1078, 1223
KasI GGCGCC 1 cut(s) 1077
Kzo9I GATC 4 cut(s) 780, 1318, 1904, 2123
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 1 cut(s) 1708
LweI GCATC 3 cut(s) 633, 871, 1986
MaeI CTAG 9 cut(s) 674, 774, 947, 1113, 1248, 1290, 1383, 1467, 1764
MaeII ACGT 2 cut(s) 296, 1339
MaeIII GTNAC 2 cut(s) 1192, 1583
MalI GATC 4 cut(s) 782, 1320, 1906, 2125
MboI GATC 4 cut(s) 780, 1318, 1904, 2123
MflI RGATCY 3 cut(s) 780, 1318, 1904
MhlI GDGCHC 1 cut(s) 1409
MlsI TGGCCA 1 cut(s) 1094
MluNI TGGCCA 1 cut(s) 1094
Mly113I GGCGCC 1 cut(s) 1078
MlyI GAGTC 4 cut(s) 49, 515, 841, 1046
MmeI TCCRAC 1 cut(s) 328
Mox20I TGGCCA 1 cut(s) 1094
MroXI GAANNNNTTC 2 cut(s) 942, 2051
MscI TGGCCA 1 cut(s) 1094
MseI TTAA 4 cut(s) 887, 900, 1356, 2064
MslI CAYNNNNRTG 3 cut(s) 635, 1458, 1752
Msp20I TGGCCA 1 cut(s) 1094
MspA1I CMGCKG 1 cut(s) 803
MspI CCGG 3 cut(s) 62, 264, 1059
MspR9I CCNGG 8 cut(s) 264, 265, 709, 1060, 1149, 1333, 1542, 1695
Mva1269I GAATGC 1 cut(s) 686
MvaI CCWGG 5 cut(s) 709, 1149, 1333, 1542, 1695
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 2 cut(s) 250, 809
NarI GGCGCC 1 cut(s) 1078
NciI CCSGG 3 cut(s) 264, 265, 1060
NcoI CCATGG 2 cut(s) 96, 1089
NdeI CATATG 1 cut(s) 1181
NdeII GATC 4 cut(s) 780, 1318, 1904, 2123
NlaIV GGNNCC 6 cut(s) 302, 315, 782, 798, 1079, 1906
NmuCI GTSAC 1 cut(s) 1192
NsbI TGCGCA 1 cut(s) 1224
NspI RCATGY 2 cut(s) 1474, 1652
OliI CACNNNNGTG 1 cut(s) 635
PaeI GCATGC 1 cut(s) 1474
PaeR7I CTCGAG 1 cut(s) 575
PciSI GCTCTTC 1 cut(s) 72
PctI GAATGC 1 cut(s) 686
PdmI GAANNNNTTC 2 cut(s) 942, 2051
PfeI GAWTC 4 cut(s) 1108, 1209, 1546, 1679
PflMI CCANNNNNTGG 1 cut(s) 310
PkrI GCNGC 1 cut(s) 94
PleI GAGTC 4 cut(s) 49, 515, 841, 1046
PluTI GGCGCC 1 cut(s) 1081
PpsI GAGTC 4 cut(s) 49, 515, 841, 1046
PshAI GACNNNNGTC 1 cut(s) 299
PsiI TTATAA 1 cut(s) 974
Psp6I CCWGG 5 cut(s) 707, 1147, 1331, 1540, 1693
PspGI CCWGG 5 cut(s) 707, 1147, 1331, 1540, 1693
PspN4I GGNNCC 6 cut(s) 302, 315, 782, 798, 1079, 1906
PspPI GGNCC 4 cut(s) 136, 301, 313, 1293
PsuI RGATCY 3 cut(s) 780, 1318, 1904
RsaI GTAC 4 cut(s) 180, 1216, 1498, 1945
RsaNI GTAC 4 cut(s) 179, 1215, 1497, 1944
RseI CAYNNNNRTG 3 cut(s) 635, 1458, 1752
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 4 cut(s) 887, 900, 1356, 2064
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 4 cut(s) 780, 1318, 1904, 2123
Sau96I GGNCC 4 cut(s) 136, 301, 313, 1293
SchI GAGTC 4 cut(s) 49, 515, 841, 1046
ScrFI CCNGG 8 cut(s) 264, 265, 709, 1060, 1149, 1333, 1542, 1695
SduI GDGCHC 1 cut(s) 1409
SfaNI GCATC 3 cut(s) 633, 871, 1986
SfoI GGCGCC 1 cut(s) 1079
Sfr274I CTCGAG 1 cut(s) 575
SinI GGWCC 2 cut(s) 301, 1293
SlaI CTCGAG 1 cut(s) 575
SmaI CCCGGG 1 cut(s) 265
SmiMI CAYNNNNRTG 3 cut(s) 635, 1458, 1752
SmlI CTYRAG 4 cut(s) 364, 575, 1186, 1882
SmoI CTYRAG 4 cut(s) 364, 575, 1186, 1882
SphI GCATGC 1 cut(s) 1474
SsiI CCGC 4 cut(s) 92, 761, 801, 1646
SspDI GGCGCC 1 cut(s) 1077
SspMI CTAG 9 cut(s) 674, 774, 947, 1113, 1248, 1290, 1383, 1467, 1764
StyD4I CCNGG 8 cut(s) 262, 263, 707, 1058, 1147, 1331, 1540, 1693
StyI CCWWGG 5 cut(s) 96, 455, 989, 1089, 1908
TaaI ACNGT 6 cut(s) 909, 1307, 1438, 1496, 1505, 1847
TaiI ACGT 2 cut(s) 299, 1342
TaqI TCGA 8 cut(s) 6, 228, 276, 576, 600, 1000, 1758, 2126
TatI WGTACW 1 cut(s) 1943
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 4 cut(s) 1108, 1209, 1546, 1679
Tru1I TTAA 4 cut(s) 887, 900, 1356, 2064
Tru9I TTAA 4 cut(s) 887, 900, 1356, 2064
TscAI CASTG 4 cut(s) 763, 1310, 1443, 1975
TseFI GTSAC 1 cut(s) 1192
Tsp45I GTSAC 1 cut(s) 1192
TspGWI ACGGA 1 cut(s) 1674
TspMI CCCGGG 1 cut(s) 263
TspRI CASTG 4 cut(s) 763, 1310, 1443, 1975
Van91I CCANNNNNTGG 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 301, 1293
XapI RAATTY 4 cut(s) 650, 863, 1630, 1807
XbaI TCTAGA 1 cut(s) 946
XceI RCATGY 2 cut(s) 1474, 1652
XhoI CTCGAG 1 cut(s) 575
XmaI CCCGGG 1 cut(s) 263
XmnI GAANNNNTTC 2 cut(s) 942, 2051
XspI CTAG 9 cut(s) 674, 774, 947, 1113, 1248, 1290, 1383, 1467, 1764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.