RchiOBHm_Chr5g0038791

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000264
Physical Location & Seq
Forward (+)
33575434 .. 33584863
9430 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31739

Sequence Viewer

Length: 1812 bp
ATGGTTTTGGGAGGCTTCTGTGTTTTGGGGGACTCTATTTTGAGTCCTATTGAAAGCAGAGAGCTGAAAGAAATAGAAGAGAAACTTGAGAAAGAGCGAAAAGGGCTTTACGATTACAGTGGGCGTGGGTCTAAGGTGGCCAGCGCAGAGTTATGGATGAAGAAATTCATGAAGAGCGGGAGTAAACTAGAGCACCTAGCATTTCTCGTCTTTTGGTTGTCCAGGTATGTTTTCCACGGCAGTCGTGATTCAGTAAACAAGGCTGTTTTCTCTGTTGCAATTCATTTAGATAGGGGCATTCGGATTGCTCTTGCACCGGCTGTTCTTGCTCACATTTATGGAGATTTGAGTCTGCTTAAAAGGACTATTGTAGCTTCAAATGGCAGTAATGAATTAAAGCTAGAGTCACCATTTCATTTAGTTCAGGTTTGGGCATGGGAAAGGTTTTTGGAACTTAGGCCAAAGCCGAATGTTATGAGCTATGCTGAGCCAAGATTGGCTAGATGGGATAGAATACATGGTCAGGATTTCGGAAATTTGAGGATTGTTTTAGACTCTGCTGGAGAATGTTTCATGTGGCGCCCTTATGCCATTGCCATTGAAAACTGGAAGCTTCCTGGTTACTGTTCAGAAAAAGATAGGTGCGTTGGTCCTGGTTTGGATGATGAGTTCCTTTCATTTGCTCTATGCTTGAGGGTGATTGATTTGGTTGGATTTGGTCGAAATGAGCGATACCTTCCGCACAGGGTGGCTAGGCAATTTGGATATGATCAAGATATTCCGTGTGTCATTGCTCAATCCAATGATGGTTCTGGTATTTTCATTCCTCATATATCGTGGAATGATCACATGAAGGAAATTAAGGATGTAAAATTGTATATTCCATCTAGGCTGTCTGAAGCAGATGTGAGCACAAGATACATGAAATGGTGGGAGGAAACAGTATCAGGTCTCAAACACATAACGAAGCCTAGGATGCCACTGAAGAAGAAAGCAAAGACTGTTGAGGGATCACTACTGACGGGTAAACCTGCCCTCAGGCATCCTGGTTTCCGGCGAACAAAAGTTGCTGAGGGTTCAAATGAAAGAAACAGGTTTACTGGTTTCACCATTCCTTCTGTTTCTTGTCCAAAGAGTTATGCAAAAGTAGTAAAGATTTCCAAAGTACATAATGTAGGTAATGATTCCCTTGTTCCTCCCGGATTTCCTCCCAGATTTCCTCCCACAGGTAATATGATGGAAGTTGGAGACACTATGGACAAAGATGAACCGACTAGTCCAGAAATTTTGGAAAAAGGGAAGCAAAAAAACGTTGAAACTAGAAAAGGGGTTGATGATTCAATTGCTGATGGAAGTTCTGTTGATGATATTATGAAGTCAGAAAGATTGGAGGAAGAGGTTATGCTGAGTCCGACTTTGGTTTGGGGAACTAAGGCCAAGAGGAACATTAAATATGTAATTGTGAGTAATGCAAGAAGTCTAGATAATGACATGGTAAGAACTATTGGCAATGAATGGGCGAGCAGGGTTGAGAGACAGGTTTCAGAGCTTAAAAATCTTGTAAGAAGCTTTAAAGAATCAGACATTTTGAAATATTGTAAGAAGCATAAAAATATTGAAACTAGAAGAGATGGTGACTGCGTGAAGTTATCAGGTGAAGTTCAAGATTTGGCATCTTCAACTGTGGAAGAAGGTTCTGTTATGAAACAGGTTTCAGAGCTTAAAGCTAGGGTTAGCAAGCTTGAAAGTTTGGCTGACATGTTTCAAACAAACACTAGTGGAGCAGGTGTGGGAACAGCTAAGGAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

603

Amino Acids

68.03

Weight (kDa)

9.08

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 1 - 312 3.4e-82 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1775
Acc36I ACCTGC 2 cut(s) 1039, 1775
AccB1I GGYRCC 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 177
AciI CCGC 2 cut(s) 177, 740
AclI AACGTT 1 cut(s) 1311
AclWI GGATC 1 cut(s) 1018
AcoI YGGCCR 1 cut(s) 138
AcsI RAATTY 3 cut(s) 164, 535, 1284
AcuI CTGAAG 2 cut(s) 918, 1004
AcyI GRCGYC 1 cut(s) 580
AdeI CACNNNGTG 1 cut(s) 748
AfaI GTAC 1 cut(s) 1167
AfiI CCNNNNNNNGG 1 cut(s) 1226
AflIII ACRYGT 1 cut(s) 1758
AhlI ACTAGT 2 cut(s) 1274, 1775
AjnI CCWGG 4 cut(s) 221, 616, 652, 1045
AloI GAACNNNNNNTCC 2 cut(s) 653, 685
Alw21I GWGCWC 2 cut(s) 195, 914
Alw26I GTCTC 3 cut(s) 956, 1242, 1528
AlwI GGATC 1 cut(s) 1018
AoxI GGCC 3 cut(s) 138, 458, 1434
ApoI RAATTY 3 cut(s) 164, 535, 1284
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 971
AspLEI GCGC 2 cut(s) 146, 582
AspS9I GGNCC 1 cut(s) 650
AsuC2I CCSGG 1 cut(s) 1200
AsuHPI GGTGA 5 cut(s) 399, 709, 1099, 1646, 1667
AvaII GGWCC 1 cut(s) 650
AvrII CCTAGG 1 cut(s) 971
AxyI CCTNAGG 1 cut(s) 1037
BalI TGGCCA 1 cut(s) 140
BanI GGYRCC 1 cut(s) 579
Bbv12I GWGCWC 2 cut(s) 195, 914
BbvCI CCTCAGC 1 cut(s) 1071
BccI CCATC 6 cut(s) 498, 800, 892, 1231, 1343, 1625
BceAI ACGGC 1 cut(s) 253
BciT130I CCWGG 4 cut(s) 223, 618, 654, 1047
BclI TGATCA 2 cut(s) 769, 844
BcnI CCSGG 1 cut(s) 1200
BcoDI GTCTC 3 cut(s) 956, 1242, 1528
BcuI ACTAGT 2 cut(s) 1274, 1775
BfoI RGCGCY 1 cut(s) 583
BfuAI ACCTGC 2 cut(s) 1039, 1775
BlnI CCTAGG 1 cut(s) 971
BlpI GCTNAGC 1 cut(s) 486
Bme1390I CCNGG 5 cut(s) 223, 618, 654, 1047, 1200
Bme18I GGWCC 1 cut(s) 650
BmgT120I GGNCC 1 cut(s) 650
BmiI GGNNCC 1 cut(s) 581
BmrFI CCNGG 5 cut(s) 223, 618, 654, 1047, 1200
BmsI GCATC 3 cut(s) 966, 1051, 1682
BpmI CTGGAG 1 cut(s) 582
Bpu10I CCTNAGC 2 cut(s) 1071, 1800
Bpu1102I GCTNAGC 1 cut(s) 486
BpuEI CTTGAG 2 cut(s) 107, 712
BpuMI CCSGG 1 cut(s) 1200
BsaHI GRCGYC 1 cut(s) 580
BsaI GGTCTC 1 cut(s) 956
BsaJI CCNNGG 2 cut(s) 235, 971
BsaXI ACNNNNNCTCC 2 cut(s) 1773, 1803
Bsc4I CCNNNNNNNGG 1 cut(s) 1226
Bse118I RCCGGY 1 cut(s) 316
Bse1I ACTGG 2 cut(s) 611, 1105
Bse21I CCTNAGG 1 cut(s) 1037
Bse3DI GCAATG 3 cut(s) 591, 789, 1516
BseBI CCWGG 4 cut(s) 223, 618, 654, 1047
BseDI CCNNGG 2 cut(s) 235, 971
BseGI GGATG 5 cut(s) 162, 667, 871, 981, 1042
BseLI CCNNNNNNNGG 1 cut(s) 1226
BseMI GCAATG 3 cut(s) 591, 789, 1516
BseMII CTCAG 4 cut(s) 477, 1051, 1062, 1397
BseNI ACTGG 2 cut(s) 611, 1105
BshFI GGCC 3 cut(s) 140, 460, 1436
BshNI GGYRCC 1 cut(s) 579
BsiHKAI GWGCWC 2 cut(s) 195, 914
BsiSI CCGG 3 cut(s) 317, 1054, 1200
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 1226
BsmAI GTCTC 3 cut(s) 956, 1242, 1528
BsmFI GGGAC 1 cut(s) 44
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 3 cut(s) 140, 460, 1436
Bso31I GGTCTC 1 cut(s) 956
Bsp1286I GDGCHC 2 cut(s) 195, 914
Bsp143I GATC 3 cut(s) 769, 844, 1010
Bsp1720I GCTNAGC 1 cut(s) 486
BspACI CCGC 2 cut(s) 177, 740
BspANI GGCC 3 cut(s) 140, 460, 1436
BspCNI CTCAG 4 cut(s) 478, 1050, 1063, 1398
BspHI TCATGA 1 cut(s) 168
BspLI GGNNCC 1 cut(s) 581
BspMI ACCTGC 2 cut(s) 1039, 1775
BspPI GGATC 1 cut(s) 1018
BspQI GCTCTTC 1 cut(s) 167
BspT107I GGYRCC 1 cut(s) 579
BspTNI GGTCTC 1 cut(s) 956
BsrBI CCGCTC 1 cut(s) 177
BsrDI GCAATG 3 cut(s) 591, 789, 1516
BsrFI RCCGGY 1 cut(s) 316
BsrI ACTGG 2 cut(s) 611, 1105
BssAI RCCGGY 1 cut(s) 316
BssECI CCNNGG 2 cut(s) 235, 971
BssMI GATC 3 cut(s) 769, 844, 1010
BssNI GRCGYC 1 cut(s) 580
BssT1I CCWWGG 1 cut(s) 971
Bst2UI CCWGG 4 cut(s) 223, 618, 654, 1047
Bst4CI ACNGT 5 cut(s) 119, 626, 943, 1003, 1684
Bst6I CTCTTC 4 cut(s) 72, 167, 1389, 1621
BstACI GRCGYC 1 cut(s) 580
BstC8I GCNNGC 3 cut(s) 142, 1522, 1739
BstDEI CTNAG 8 cut(s) 132, 455, 486, 1037, 1071, 1406, 1431, 1800
BstDSI CCRYGG 1 cut(s) 235
BstENI CCTNNNNNAGG 1 cut(s) 1224
BstF5I GGATG 5 cut(s) 162, 667, 871, 981, 1042
BstH2I RGCGCY 1 cut(s) 583
BstHHI GCGC 2 cut(s) 146, 582
BstKTI GATC 3 cut(s) 772, 847, 1013
BstMAI GTCTC 3 cut(s) 956, 1242, 1528
BstMBI GATC 3 cut(s) 769, 844, 1010
BstMWI GCNNNNNNNGC 3 cut(s) 103, 326, 976
BstNI CCWGG 4 cut(s) 223, 618, 654, 1047
BstNSI RCATGY 1 cut(s) 1762
BstSCI CCNGG 5 cut(s) 221, 616, 652, 1045, 1198
Bsu36I CCTNAGG 1 cut(s) 1037
BsuRI GGCC 3 cut(s) 140, 460, 1436
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 5 cut(s) 162, 667, 871, 981, 1042
BtsIMutI CAGTG 2 cut(s) 124, 980
BveI ACCTGC 2 cut(s) 1039, 1775
Cac8I GCNNGC 3 cut(s) 142, 1522, 1739
CciI TCATGA 1 cut(s) 168
CfoI GCGC 2 cut(s) 146, 582
Cfr10I RCCGGY 1 cut(s) 316
Cfr13I GGNCC 1 cut(s) 650
Csp6I GTAC 1 cut(s) 1166
CviAII CATG 8 cut(s) 169, 435, 518, 574, 850, 922, 1492, 1759
CviQI GTAC 1 cut(s) 1166
DdeI CTNAG 8 cut(s) 132, 455, 486, 1037, 1071, 1406, 1431, 1800
DinI GGCGCC 1 cut(s) 581
DpnI GATC 3 cut(s) 771, 846, 1012
DpnII GATC 3 cut(s) 769, 844, 1010
DraI TTTAAA 1 cut(s) 1573
DraIII CACNNNGTG 1 cut(s) 748
EaeI YGGCCR 1 cut(s) 138
Eam1104I CTCTTC 4 cut(s) 72, 167, 1389, 1621
EarI CTCTTC 4 cut(s) 72, 167, 1389, 1621
Eco130I CCWWGG 1 cut(s) 971
Eco31I GGTCTC 1 cut(s) 956
Eco47I GGWCC 1 cut(s) 650
Eco57I CTGAAG 2 cut(s) 918, 1004
Eco81I CCTNAGG 1 cut(s) 1037
EcoNI CCTNNNNNAGG 1 cut(s) 1224
EcoRII CCWGG 4 cut(s) 221, 616, 652, 1045
EcoT14I CCWWGG 1 cut(s) 971
EgeI GGCGCC 1 cut(s) 581
EheI GGCGCC 1 cut(s) 581
ErhI CCWWGG 1 cut(s) 971
FaeI CATG 8 cut(s) 172, 438, 521, 577, 853, 925, 1495, 1762
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FaqI GGGAC 1 cut(s) 44
FatI CATG 8 cut(s) 168, 434, 517, 573, 849, 921, 1491, 1758
FauI CCCGC 1 cut(s) 170
FbaI TGATCA 2 cut(s) 769, 844
FokI GGATG 5 cut(s) 169, 674, 878, 988, 1029
GlaI GCGC 2 cut(s) 145, 581
GsuI CTGGAG 1 cut(s) 582
HaeII RGCGCY 1 cut(s) 583
HaeIII GGCC 3 cut(s) 140, 460, 1436
HapII CCGG 3 cut(s) 317, 1054, 1200
HhaI GCGC 2 cut(s) 146, 582
Hin1I GRCGYC 1 cut(s) 580
Hin1II CATG 8 cut(s) 172, 438, 521, 577, 853, 925, 1495, 1762
Hin6I GCGC 2 cut(s) 144, 580
HinP1I GCGC 2 cut(s) 144, 580
HindIII AAGCTT 3 cut(s) 611, 1567, 1739
HpaII CCGG 3 cut(s) 317, 1054, 1200
HphI GGTGA 5 cut(s) 399, 709, 1099, 1646, 1667
Hpy166II GTNNAC 4 cut(s) 185, 256, 1028, 1098
Hpy188I TCNGA 9 cut(s) 303, 533, 631, 898, 1381, 1413, 1546, 1582, 1717
Hpy188III TCNNGA 7 cut(s) 169, 245, 524, 773, 1280, 1481, 1664
Hpy8I GTNNAC 4 cut(s) 185, 256, 1028, 1098
HpyAV CCTTC 4 cut(s) 746, 847, 1125, 1685
HpyCH4III ACNGT 5 cut(s) 119, 626, 943, 1003, 1684
HpyCH4IV ACGT 1 cut(s) 1311
HpyCH4V TGCA 4 cut(s) 278, 314, 1142, 1472
HpyF10VI GCNNNNNNNGC 3 cut(s) 103, 326, 976
HpyF3I CTNAG 8 cut(s) 132, 455, 486, 1037, 1071, 1406, 1431, 1800
HpySE526I ACGT 1 cut(s) 1311
Hsp92I GRCGYC 1 cut(s) 580
Hsp92II CATG 8 cut(s) 172, 438, 521, 577, 853, 925, 1495, 1762
HspAI GCGC 2 cut(s) 144, 580
KasI GGCGCC 1 cut(s) 579
Ksp22I TGATCA 2 cut(s) 769, 844
Kzo9I GATC 3 cut(s) 769, 844, 1010
LguI GCTCTTC 1 cut(s) 167
LmnI GCTCC 1 cut(s) 1781
LweI GCATC 3 cut(s) 966, 1051, 1682
MaeII ACGT 1 cut(s) 1311
MaeIII GTNAC 3 cut(s) 405, 620, 1634
MalI GATC 3 cut(s) 771, 846, 1012
MbiI CCGCTC 1 cut(s) 177
MboI GATC 3 cut(s) 769, 844, 1010
MboII GAAGA 9 cut(s) 89, 172, 184, 997, 1000, 1406, 1638, 1668, 1700
MfeI CAATTG 1 cut(s) 1341
MhlI GDGCHC 2 cut(s) 195, 914
MlsI TGGCCA 1 cut(s) 140
MluNI TGGCCA 1 cut(s) 140
Mly113I GGCGCC 1 cut(s) 580
MlyI GAGTC 6 cut(s) 26, 52, 358, 413, 548, 1417
MmeI TCCRAC 3 cut(s) 691, 1225, 1436
Mox20I TGGCCA 1 cut(s) 140
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 140
MseI TTAA 7 cut(s) 357, 395, 861, 1449, 1551, 1572, 1722
MslI CAYNNNNRTG 1 cut(s) 336
Msp20I TGGCCA 1 cut(s) 140
MspI CCGG 3 cut(s) 317, 1054, 1200
MspR9I CCNGG 5 cut(s) 223, 618, 654, 1047, 1200
MunI CAATTG 1 cut(s) 1341
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 4 cut(s) 223, 618, 654, 1047
MwoI GCNNNNNNNGC 3 cut(s) 103, 326, 976
NarI GGCGCC 1 cut(s) 580
NciI CCSGG 1 cut(s) 1200
NdeII GATC 3 cut(s) 769, 844, 1010
NlaIII CATG 8 cut(s) 172, 438, 521, 577, 853, 925, 1495, 1762
NlaIV GGNNCC 1 cut(s) 581
NmuCI GTSAC 2 cut(s) 405, 1634
NspI RCATGY 1 cut(s) 1762
PagI TCATGA 1 cut(s) 168
PaqCI CACCTGC 1 cut(s) 1775
PciI ACATGT 1 cut(s) 1758
PciSI GCTCTTC 1 cut(s) 167
PcsI WCGNNNNNNNCGW 1 cut(s) 727
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 164
PfeI GAWTC 4 cut(s) 248, 1184, 1337, 1577
PfoI TCCNGGA 1 cut(s) 1198
PleI GAGTC 6 cut(s) 26, 51, 357, 412, 548, 1416
PluTI GGCGCC 1 cut(s) 583
PpsI GAGTC 6 cut(s) 26, 51, 357, 412, 548, 1416
PscI ACATGT 1 cut(s) 1758
Psp1406I AACGTT 1 cut(s) 1311
Psp6I CCWGG 4 cut(s) 221, 616, 652, 1045
PspGI CCWGG 4 cut(s) 221, 616, 652, 1045
PspN4I GGNNCC 1 cut(s) 581
PspPI GGNCC 1 cut(s) 650
RsaI GTAC 1 cut(s) 1167
RsaNI GTAC 1 cut(s) 1166
RseI CAYNNNNRTG 1 cut(s) 336
SapI GCTCTTC 1 cut(s) 167
SaqAI TTAA 7 cut(s) 357, 395, 861, 1449, 1551, 1572, 1722
Sau3AI GATC 3 cut(s) 769, 844, 1010
Sau96I GGNCC 1 cut(s) 650
SchI GAGTC 6 cut(s) 26, 52, 358, 413, 548, 1417
ScrFI CCNGG 5 cut(s) 223, 618, 654, 1047, 1200
SduI GDGCHC 2 cut(s) 195, 914
SfaNI GCATC 3 cut(s) 966, 1051, 1682
SfoI GGCGCC 1 cut(s) 581
SinI GGWCC 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 2 cut(s) 86, 691
SmoI CTYRAG 2 cut(s) 86, 691
SpeI ACTAGT 2 cut(s) 1274, 1775
SsiI CCGC 2 cut(s) 177, 740
SspDI GGCGCC 1 cut(s) 579
SspI AATATT 2 cut(s) 1595, 1615
StyD4I CCNGG 5 cut(s) 221, 616, 652, 1045, 1198
StyI CCWWGG 1 cut(s) 971
TaaI ACNGT 5 cut(s) 119, 626, 943, 1003, 1684
TaiI ACGT 1 cut(s) 1314
TaqI TCGA 1 cut(s) 721
TatI WGTACW 1 cut(s) 1165
TfiI GAWTC 4 cut(s) 248, 1184, 1337, 1577
Tru1I TTAA 7 cut(s) 357, 395, 861, 1449, 1551, 1572, 1722
Tru9I TTAA 7 cut(s) 357, 395, 861, 1449, 1551, 1572, 1722
TscAI CASTG 2 cut(s) 124, 987
TseFI GTSAC 2 cut(s) 405, 1634
Tsp45I GTSAC 2 cut(s) 405, 1634
TspGWI ACGGA 1 cut(s) 771
TspRI CASTG 2 cut(s) 124, 987
VpaK11BI GGWCC 1 cut(s) 650
XagI CCTNNNNNAGG 1 cut(s) 1224
XapI RAATTY 3 cut(s) 164, 535, 1284
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 1 cut(s) 1762
XmaJI CCTAGG 1 cut(s) 971
XmnI GAANNNNTTC 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.