FvH4_3g22331

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000264
Physical Location & Seq
Forward (+)
15356309 .. 15357811
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g22331.t1

Sequence Viewer

Length: 1380 bp
ATGGAGGAGAGTCCTATTCAAGAGCAAGAAGATGCTCTCATGGTTTCCCCAACTGGCGGAGGTGACCCATTTCACAAAAAAGCCTTCTTTCTGAAACCCATTGTCCCTATTTCCGCCATTGATCATGAACCTCCTTTGACGCTCACTCAGTGCCCTTTTCGATTTGACCCAAAAAAGTGGCCTCTGGAGGTTGAATTCCACGGTTGGCGACAAGGTCAAGAAGATTCGAATTGGAATTCTTGGGTTGATCGCTTGGCTCCTCTTCACCAATCCACTTGGAAAAGAGCTGGTATTTATGATGCAATCTTTAGTTCTAAGTACCAAATTAGAAGAAAGACTGATTTGGTTTACGGGGTTGCGGAGAAATGGTGTTGTGAGACCAATACCTTCCTTTTCCCATGGGTTGAAGCATCAATTACATTGGAGGATGTCATGGTTTTGGGAGGCTTTTCAGTTTCAGGGGACTCTGTTTTCAGTTCACTTGAGAGCATTGAACTGAAACAAGTGGAAGATAGATTGGTGAAGGCAAGGAAAGAAGTTAAGAGAGCAAGGGCAAGCCAATGGCTGCAGAAGTTTGTGAACAGTGGGAGTGAATTGGAGCATGAAGCATTTCTTGCCTTTTGGTTGTCAAGGTATGTCTTTCATGATCTTGATAGGTCTATACAAAAGCGTGCTTTTCCCATTGCGATTCATTTAGCTAGGGGGACTCGGATTGCGCTGGCACAGTCTGTTCTTGCTGATATTTATAATGATTTGAGTTTGTTGAAAAAGGCAATTGTAGCTTCAAATAAGTTAAAGACTAGTGATTGTGTCTTGAAGGTCAAACTCAAGTCACCATTTCATTTAGTCCAGGTTTGGGCATGGGAAAGATTTTTGAAGCTTACGCCAATACCCAATGTTATCAAATATGCTGAGCTGAGATTGGCTCGATGGGATAAAGTACATGGTCTGAGTATTGAAAATCTAAGAAGTGTTTTAGACTCAGCTGGAGAAGCTTTTATGTGGCGCCCTTATGCAATGTCCATTGAGAACTGGAATTTTCCTAAATACTACTCGGAAAAGGAAATGTGGATCGGTCCTGGTTTGGATGATGAGTTTCTGCCATTTTCCATATGCTTGAGGGTGACAGAGTTAGTTGGATTCGATAATAGAAAACAAAACCTTCCACATAGAGTAGCTATGCAATTCGGATATGATCAAGATGTTCCATGTAAGATTGCTGAATCCAAAGTATCCAGGAAGTGTTGCAATGAAAAAACTGAGATTGTAGGATTCTACATTCCATCCAGACTTTCTAAGCTGAATGTTACTGCAAGATACTTGAAGTGGTGGAATGAATCAGTGTCAGAGCTTCGGCTCTTGATCCTGATCCTATCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

460

Amino Acids

53.11

Weight (kDa)

8.6

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 97 - 445 5.8e-99 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 1005
AciI CCGC 3 cut(s) 57, 114, 359
AclWI GGATC 3 cut(s) 1079, 1357, 1363
AcsI RAATTY 3 cut(s) 194, 235, 1036
AcyI GRCGYC 1 cut(s) 1006
AdeI CACNNNGTG 1 cut(s) 150
AfaI GTAC 2 cut(s) 320, 942
AfiI CCNNNNNNNGG 2 cut(s) 56, 856
AhlI ACTAGT 1 cut(s) 800
AjnI CCWGG 3 cut(s) 849, 1078, 1235
Alw26I GTCTC 1 cut(s) 371
AlwI GGATC 3 cut(s) 1079, 1357, 1363
AoxI GGCC 1 cut(s) 179
ApeKI GCWGC 1 cut(s) 565
ApoI RAATTY 3 cut(s) 194, 235, 1036
Asp700I GAANNNNTTC 1 cut(s) 609
AspLEI GCGC 2 cut(s) 718, 1008
AspS9I GGNCC 1 cut(s) 1076
AsuHPI GGTGA 5 cut(s) 74, 257, 532, 825, 1135
AsuII TTCGAA 1 cut(s) 227
AvaII GGWCC 1 cut(s) 1076
BaeGI GKGCMC 1 cut(s) 155
BanI GGYRCC 1 cut(s) 1005
BbvI GCAGC 1 cut(s) 552
BccI CCATC 2 cut(s) 924, 1291
BciT130I CCWGG 3 cut(s) 851, 1080, 1237
BciVI GTATCC 1 cut(s) 1243
BclI TGATCA 2 cut(s) 121, 1195
BcoDI GTCTC 1 cut(s) 371
BcuI ACTAGT 1 cut(s) 800
BfaI CTAG 3 cut(s) 699, 801, 1378
BfmI CTRYAG 1 cut(s) 566
BfoI RGCGCY 1 cut(s) 1009
BfuI GTATCC 1 cut(s) 1243
BisI GCNGC 1 cut(s) 566
BlpI GCTNAGC 1 cut(s) 912
BlsI GCNGC 1 cut(s) 567
Bme1390I CCNGG 3 cut(s) 851, 1080, 1237
Bme18I GGWCC 1 cut(s) 1076
BmgT120I GGNCC 1 cut(s) 1076
BmiI GGNNCC 2 cut(s) 258, 1007
BmrFI CCNGG 3 cut(s) 851, 1080, 1237
BmsI GCATC 3 cut(s) 22, 289, 419
BplI GAGNNNNNCTC 2 cut(s) 910, 942
BpmI CTGGAG 2 cut(s) 206, 1008
Bpu1102I GCTNAGC 1 cut(s) 912
Bpu14I TTCGAA 1 cut(s) 227
BpuEI CTTGAG 3 cut(s) 503, 812, 1138
BsaBI GATNNNNATC 1 cut(s) 1367
BsaHI GRCGYC 1 cut(s) 1006
BsaI GGTCTC 1 cut(s) 371
BsaJI CCNNGG 2 cut(s) 199, 398
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 856
Bse1I ACTGG 2 cut(s) 58, 1037
Bse3DI GCAATG 3 cut(s) 681, 1023, 1255
Bse8I GATNNNNATC 1 cut(s) 1367
BseBI CCWGG 3 cut(s) 851, 1080, 1237
BseDI CCNNGG 2 cut(s) 199, 398
BseGI GGATG 3 cut(s) 433, 1093, 1283
BseJI GATNNNNATC 1 cut(s) 1367
BseLI CCNNNNNNNGG 2 cut(s) 56, 856
BseMI GCAATG 3 cut(s) 681, 1023, 1255
BseMII CTCAG 6 cut(s) 161, 903, 908, 941, 996, 1251
BseNI ACTGG 2 cut(s) 58, 1037
BseRI GAGGAG 2 cut(s) 20, 249
BseSI GKGCMC 1 cut(s) 155
BseXI GCAGC 1 cut(s) 552
BshFI GGCC 1 cut(s) 181
BshNI GGYRCC 1 cut(s) 1005
BslFI GGGAC 3 cut(s) 89, 476, 718
BslI CCNNNNNNNGG 2 cut(s) 56, 856
BsmAI GTCTC 1 cut(s) 371
BsmFI GGGAC 3 cut(s) 89, 476, 718
BsnI GGCC 1 cut(s) 181
Bso31I GGTCTC 1 cut(s) 371
Bsp119I TTCGAA 1 cut(s) 227
Bsp1286I GDGCHC 1 cut(s) 155
Bsp143I GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
Bsp1720I GCTNAGC 1 cut(s) 912
Bsp19I CCATGG 1 cut(s) 398
BspACI CCGC 3 cut(s) 57, 114, 359
BspANI GGCC 1 cut(s) 181
BspCNI CTCAG 6 cut(s) 160, 904, 909, 942, 995, 1252
BspHI TCATGA 2 cut(s) 124, 643
BspLI GGNNCC 2 cut(s) 258, 1007
BspMAI CTGCAG 1 cut(s) 570
BspPI GGATC 3 cut(s) 1079, 1357, 1363
BspT104I TTCGAA 1 cut(s) 227
BspT107I GGYRCC 1 cut(s) 1005
BspTNI GGTCTC 1 cut(s) 371
BsrDI GCAATG 3 cut(s) 681, 1023, 1255
BsrI ACTGG 2 cut(s) 58, 1037
BssECI CCNNGG 2 cut(s) 199, 398
BssMI GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
BssNI GRCGYC 1 cut(s) 1006
BssT1I CCWWGG 1 cut(s) 398
Bst2UI CCWGG 3 cut(s) 851, 1080, 1237
Bst4CI ACNGT 3 cut(s) 203, 584, 726
Bst6I CTCTTC 1 cut(s) 267
BstACI GRCGYC 1 cut(s) 1006
BstAPI GCANNNNNTGC 1 cut(s) 614
BstBI TTCGAA 1 cut(s) 227
BstC8I GCNNGC 3 cut(s) 556, 672, 720
BstDEI CTNAG 9 cut(s) 147, 315, 912, 917, 950, 965, 982, 1260, 1296
BstDSI CCRYGG 2 cut(s) 199, 398
BstEII GGTNACC 1 cut(s) 62
BstF5I GGATG 3 cut(s) 433, 1093, 1283
BstH2I RGCGCY 1 cut(s) 1009
BstHHI GCGC 2 cut(s) 718, 1008
BstKTI GATC 7 cut(s) 124, 250, 649, 1074, 1198, 1365, 1371
BstMAI GTCTC 1 cut(s) 371
BstMBI GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
BstMWI GCNNNNNNNGC 3 cut(s) 614, 779, 992
BstNI CCWGG 3 cut(s) 851, 1080, 1237
BstPI GGTNACC 1 cut(s) 62
BstSCI CCNGG 3 cut(s) 849, 1078, 1235
BstSFI CTRYAG 1 cut(s) 566
BstSLI GKGCMC 1 cut(s) 155
BstV1I GCAGC 1 cut(s) 552
BstXI CCANNNNNNTGG 1 cut(s) 177
BsuI GTATCC 1 cut(s) 1243
BsuRI GGCC 1 cut(s) 181
BtgI CCRYGG 2 cut(s) 199, 398
BtsCI GGATG 3 cut(s) 433, 1093, 1283
BtsIMutI CAGTG 3 cut(s) 155, 589, 1347
Cac8I GCNNGC 3 cut(s) 556, 672, 720
CciI TCATGA 2 cut(s) 124, 643
CfoI GCGC 2 cut(s) 718, 1008
Cfr13I GGNCC 1 cut(s) 1076
CseI GACGC 1 cut(s) 148
Csp6I GTAC 2 cut(s) 319, 941
CviAII CATG 9 cut(s) 40, 125, 399, 433, 602, 644, 861, 944, 1209
CviQI GTAC 2 cut(s) 319, 941
DdeI CTNAG 9 cut(s) 147, 315, 912, 917, 950, 965, 982, 1260, 1296
DinI GGCGCC 1 cut(s) 1007
DpnI GATC 7 cut(s) 123, 249, 648, 1073, 1197, 1364, 1370
DpnII GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
DraIII CACNNNGTG 1 cut(s) 150
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
EciI GGCGGA 2 cut(s) 72, 103
Eco130I CCWWGG 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 371
Eco47I GGWCC 1 cut(s) 1076
Eco91I GGTNACC 1 cut(s) 62
EcoO65I GGTNACC 1 cut(s) 62
EcoRI GAATTC 2 cut(s) 194, 235
EcoRII CCWGG 3 cut(s) 849, 1078, 1235
EcoT14I CCWWGG 1 cut(s) 398
EgeI GGCGCC 1 cut(s) 1007
EheI GGCGCC 1 cut(s) 1007
ErhI CCWWGG 1 cut(s) 398
FaeI CATG 9 cut(s) 43, 128, 402, 436, 605, 647, 864, 947, 1212
FalI AAGNNNNNCTT 2 cut(s) 597, 629
FaqI GGGAC 3 cut(s) 89, 476, 718
FatI CATG 9 cut(s) 39, 124, 398, 432, 601, 643, 860, 943, 1208
FauNDI CATATG 1 cut(s) 1112
FbaI TGATCA 2 cut(s) 121, 1195
Fnu4HI GCNGC 1 cut(s) 566
FokI GGATG 3 cut(s) 440, 1100, 1270
Fsp4HI GCNGC 1 cut(s) 566
FspBI CTAG 3 cut(s) 699, 801, 1378
GlaI GCGC 2 cut(s) 717, 1007
GluI GCNGC 1 cut(s) 566
GsuI CTGGAG 2 cut(s) 206, 1008
HaeII RGCGCY 1 cut(s) 1009
HaeIII GGCC 1 cut(s) 181
HgaI GACGC 1 cut(s) 148
HhaI GCGC 2 cut(s) 718, 1008
Hin1I GRCGYC 1 cut(s) 1006
Hin1II CATG 9 cut(s) 43, 128, 402, 436, 605, 647, 864, 947, 1212
Hin6I GCGC 2 cut(s) 716, 1006
HinP1I GCGC 2 cut(s) 716, 1006
HindIII AAGCTT 2 cut(s) 878, 993
HphI GGTGA 5 cut(s) 74, 257, 532, 825, 1135
Hpy166II GTNNAC 3 cut(s) 349, 479, 580
Hpy188I TCNGA 6 cut(s) 93, 711, 951, 1057, 1190, 1348
Hpy8I GTNNAC 3 cut(s) 349, 479, 580
HpyAV CCTTC 5 cut(s) 94, 397, 517, 811, 1172
HpyCH4III ACNGT 3 cut(s) 203, 584, 726
HpyCH4V TGCA 6 cut(s) 302, 568, 1016, 1183, 1248, 1313
HpyF10VI GCNNNNNNNGC 3 cut(s) 614, 779, 992
HpyF3I CTNAG 9 cut(s) 147, 315, 912, 917, 950, 965, 982, 1260, 1296
Hsp92I GRCGYC 1 cut(s) 1006
Hsp92II CATG 9 cut(s) 43, 128, 402, 436, 605, 647, 864, 947, 1212
HspAI GCGC 2 cut(s) 716, 1006
KasI GGCGCC 1 cut(s) 1005
Ksp22I TGATCA 2 cut(s) 121, 1195
Kzo9I GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
LmnI GCTCC 2 cut(s) 262, 598
Lsp1109I GCAGC 1 cut(s) 552
LweI GCATC 3 cut(s) 22, 289, 419
MaeI CTAG 3 cut(s) 699, 801, 1378
MaeIII GTNAC 4 cut(s) 62, 831, 1123, 1306
MalI GATC 7 cut(s) 123, 249, 648, 1073, 1197, 1364, 1370
MboI GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
MboII GAAGA 5 cut(s) 41, 233, 254, 342, 521
MfeI CAATTG 1 cut(s) 774
MhlI GDGCHC 1 cut(s) 155
MluCI AATT 9 cut(s) 194, 229, 235, 324, 414, 593, 774, 1036, 1184
Mly113I GGCGCC 1 cut(s) 1006
MlyI GAGTC 4 cut(s) 19, 458, 700, 974
MmeI TCCRAC 1 cut(s) 1117
MnlI CCTC 8 cut(s) 53, 141, 181, 192, 270, 418, 437, 1113
MroXI GAANNNNTTC 1 cut(s) 609
MseI TTAA 2 cut(s) 540, 794
MspA1I CMGCKG 1 cut(s) 986
MspR9I CCNGG 3 cut(s) 851, 1080, 1237
MunI CAATTG 1 cut(s) 774
MvaI CCWGG 3 cut(s) 851, 1080, 1237
MwoI GCNNNNNNNGC 3 cut(s) 614, 779, 992
NarI GGCGCC 1 cut(s) 1006
NcoI CCATGG 1 cut(s) 398
NdeI CATATG 1 cut(s) 1112
NdeII GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
NlaIII CATG 9 cut(s) 43, 128, 402, 436, 605, 647, 864, 947, 1212
NlaIV GGNNCC 2 cut(s) 258, 1007
NmuCI GTSAC 3 cut(s) 62, 831, 1123
NspV TTCGAA 1 cut(s) 227
PagI TCATGA 2 cut(s) 124, 643
PdmI GAANNNNTTC 1 cut(s) 609
PfeI GAWTC 6 cut(s) 224, 688, 1140, 1223, 1272, 1337
PflFI GACNNNGTC 1 cut(s) 213
PfoI TCCNGGA 1 cut(s) 1235
PkrI GCNGC 1 cut(s) 567
PleI GAGTC 4 cut(s) 18, 458, 700, 974
PluTI GGCGCC 1 cut(s) 1009
PpsI GAGTC 4 cut(s) 18, 458, 700, 974
PsiI TTATAA 1 cut(s) 747
Psp6I CCWGG 3 cut(s) 849, 1078, 1235
PspEI GGTNACC 1 cut(s) 62
PspGI CCWGG 3 cut(s) 849, 1078, 1235
PspN4I GGNNCC 2 cut(s) 258, 1007
PspPI GGNCC 1 cut(s) 1076
PstI CTGCAG 1 cut(s) 570
PsyI GACNNNGTC 1 cut(s) 213
PvuII CAGCTG 1 cut(s) 986
RsaI GTAC 2 cut(s) 320, 942
RsaNI GTAC 2 cut(s) 319, 941
SaqAI TTAA 2 cut(s) 540, 794
SatI GCNGC 1 cut(s) 566
Sau3AI GATC 7 cut(s) 121, 247, 646, 1071, 1195, 1362, 1368
Sau96I GGNCC 1 cut(s) 1076
SchI GAGTC 4 cut(s) 19, 458, 700, 974
ScrFI CCNGG 3 cut(s) 851, 1080, 1237
SduI GDGCHC 1 cut(s) 155
SfaNI GCATC 3 cut(s) 22, 289, 419
SfcI CTRYAG 1 cut(s) 566
SfoI GGCGCC 1 cut(s) 1007
SfuI TTCGAA 1 cut(s) 227
SinI GGWCC 1 cut(s) 1076
SmlI CTYRAG 3 cut(s) 482, 827, 1117
SmoI CTYRAG 3 cut(s) 482, 827, 1117
SpeI ACTAGT 1 cut(s) 800
Sse9I AATT 9 cut(s) 194, 229, 235, 324, 414, 593, 774, 1036, 1184
SsiI CCGC 3 cut(s) 57, 114, 359
SspDI GGCGCC 1 cut(s) 1005
SspMI CTAG 3 cut(s) 699, 801, 1378
StyD4I CCNGG 3 cut(s) 849, 1078, 1235
StyI CCWWGG 1 cut(s) 398
TaaI ACNGT 3 cut(s) 203, 584, 726
TaqI TCGA 4 cut(s) 160, 227, 928, 1143
TaqII GACCGA 1 cut(s) 1064
TasI AATT 9 cut(s) 194, 229, 235, 324, 414, 593, 774, 1036, 1184
TatI WGTACW 1 cut(s) 940
TfiI GAWTC 6 cut(s) 224, 688, 1140, 1223, 1272, 1337
Tru1I TTAA 2 cut(s) 540, 794
Tru9I TTAA 2 cut(s) 540, 794
TscAI CASTG 3 cut(s) 155, 589, 1347
TseFI GTSAC 3 cut(s) 62, 831, 1123
TseI GCWGC 1 cut(s) 565
Tsp45I GTSAC 3 cut(s) 62, 831, 1123
TspDTI ATGAA 7 cut(s) 141, 618, 632, 680, 830, 1266, 1350
TspRI CASTG 3 cut(s) 155, 589, 1347
Tth111I GACNNNGTC 1 cut(s) 213
VpaK11BI GGWCC 1 cut(s) 1076
XapI RAATTY 3 cut(s) 194, 235, 1036
XmnI GAANNNNTTC 1 cut(s) 609
XspI CTAG 3 cut(s) 699, 801, 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.