Rh5CG299200

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000264
Physical Location & Seq
Forward (+)
32960478 .. 32966601
6124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG299200.1

Sequence Viewer

Length: 2250 bp
ATGGACCGTCCACCGGACACCATGGTTGAAGAGGAAGAAGAGCTCATGGTTTCACCTACTGGTGGAGACCCATTTCACAAAATAGCCCATTTTCTGAAACCGGTAGTGCCTTCCTCCGTTTTTAAGTTCCCTAATGAATCTTTCTCCTCCCTCCCTCCACATTTTGGGCCAAGAGAATGCCCTTTAGAGGTAGAATTCCCTGGGTGGAGAATTCAGCTTCAAGAAGATTGGACTGCTTGGGTTGACCGATTGGCTTCACTTCACCAATCCACATGGAAGAAAGCTGGTATATATGAAGCAATCTTCAACTCGACGTACCGAATAAGAAGAAACACCGAGTTGATATATGGGTTGGCAGAGAAATGGTGTTCTGAAACTAATAGTTTCATTTTTGCATGGGGTGAAGCAACAATCACATTAGAGGATTTGATGGTGATGGGAGGCTATTCCGTTCTTGGAGAGTCGACTTTCAACCCTCTTGAAAACAGAGAGCTCAAGGAAATAGAAGAGAAACTTAATGAAGTGAGAACAGAAATAAACAGGGGTGCGTCGCGCAGACCTTCCGCTAGCTCATGGTTGAAGAAGTTCAAAAACAATGGCAGTGAATTGGAGCATGAAGCATTTCTTGTGATGTGGTTGTGCAGGTATGTTTTTCCGGGTACTTATAATACAATACAAAAGGGTGTCTTTTCCATTGCAATTCATTTAGCTAGGGGCACCCGAGTTGCACTTGCACCCGCTATTCTTGCTAGCATTTATAAAGATTTGAGTTTATTGAATTCAGCAATTGTGGATTCAAGCAAGTTAGAGACAGGTTGTGATGGTGCTATGAAAGTCAGCATCAAGTCACCATTTCAATTTGTTCAGCTTTGGGCGTGGGAAAGATTTGTAGAGCTAAGTCCTATCCCCGGAGTGATCAATCTTGGGCAGCCAAGATTGGCTCGATGGGACAAAGTAAATGGTGTGGAAGTTGAAAACTTGAGGAGGGTTTTAGACTCCGCCGGAGATGGTTTCAAGTGGCGTCCTTATGCCTTGACCACTGAAAACTGGCAGTTGCCTAAATACTATCCTGAAGAGGAAATGCATGTATCAGATTGTTCAGGTTTGGATGATGAGTTGCATTCATTTTTCAGATGCTTGAGGGCCAGTGAGCTGTCTGGATTTGGTACTATTGAGCAGTACCTTCCGCATAGAGTAGCAATGCAGTTTGGATTTGATCAAGACATTCCATGTGTTGTCGCTCGATCCAATCAGAGTTCTGATATAGCTTGGAGTCATTACATCAAGAAATTTGGGAATGCAAGTTTATATGTTCCCCAGGTTTTTGAAGGCAGATATAAGCACAAGATACTTGATGTGGTGGAAGGAATCAATGTTGGGTCTCAAAAAGACTATCACGCAAAAGTAAAGAAATCAAAGTGTATTGGAGGATCACAAATGAGGGCTAAACCATCCCCTGTACATCCTGGTTCTGCCCCCAAGAAAGCTGTAGAAGGATCTAAGAAATGGAAGAAGAATCATGATTTCATCCTTCCTCCTGTTTCTAATCCAAAGGATTCTGAAAATTTGGAGCTGCTTTCAAAAGGTAATGAAGGTAATGATTCCCTTTTTCCTCCAGGATTTCCTCGCAAATGTAGTAGAATGGAAGCCGAAGGTTCAATGGATGAAGATGGACTAACTTTATCAGAACTTATGAAATATAATAAATTCAGAAGGGTTAATATGAGAACATGTGGTGACAGTGAAAAATTGCCATGTCAAGTTCAAAATCTGGCATCTTCAAGTTCTGTTCATACTATGAAGTCAGAAAGGTTTGAAGCTGGAGGTCCAATGGATGAAGCACAAATTATTAAATGTCATTCAAAACAAAAAAATGTCGAAACTAGAACATGTTGTGACAGTGAGAAGTTATCAAGTCGTGTTCAAAATCTGTCATTTTCAATTGCAGCAAGTTCCGCTGATATTATGAAGTCAAAGAGATCAGGGACAGAGGATGTGTTGAATGATGTTTTGATTGAAGGGTCCAAGGCCGACAGAAACTTGAAAAATGTTATTGGGAGTACTGCAAGAAGTTCAGACATGGCAAGCATCGTTGACAATGAATGTGCTAGCAACAGCTCTCTAAATGAGAAACGGGTGTCAGTGCTTAAAGATAGGGTCAGCAGGCTTGAAGTTATAATTAGTGTGTTAAAAGCAAATTATTCTGGGAACAAGTTAGAGGAAAAGCTTATGAAACAAGCCCCACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

749

Amino Acids

84.23

Weight (kDa)

7.22

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 96 - 444 2.8e-103 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 666, 759, 2177
Acc36I ACCTGC 1 cut(s) 633
AccB1I GGYRCC 1 cut(s) 716
AccB7I CCANNNNNTGG 1 cut(s) 164
AccI GTMKAC 1 cut(s) 464
AccII CGCG 1 cut(s) 553
AciI CCGC 5 cut(s) 564, 738, 999, 1187, 1956
AclWI GGATC 3 cut(s) 1239, 1438, 1504
AcsI RAATTY 6 cut(s) 194, 210, 778, 1289, 1564, 1706
AcuI CTGAAG 1 cut(s) 1092
AcyI GRCGYC 1 cut(s) 1021
AfaI GTAC 6 cut(s) 317, 661, 1168, 1181, 1461, 2062
AfiI CCNNNNNNNGG 5 cut(s) 13, 62, 164, 187, 908
AflIII ACRYGT 2 cut(s) 1730, 1889
AgeI ACCGGT 1 cut(s) 100
AjnI CCWGG 4 cut(s) 199, 1317, 1465, 1615
Alw21I GWGCWC 2 cut(s) 45, 495
Alw26I GTCTC 3 cut(s) 60, 803, 1386
AlwI GGATC 3 cut(s) 1239, 1438, 1504
Ama87I CYCGRG 1 cut(s) 720
AoxI GGCC 3 cut(s) 167, 1143, 2028
ApeKI GCWGC 3 cut(s) 928, 1573, 1946
ApoI RAATTY 6 cut(s) 194, 210, 778, 1289, 1564, 1706
AsiGI ACCGGT 1 cut(s) 100
Asp700I GAANNNNTTC 2 cut(s) 584, 621
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 5 cut(s) 4, 167, 1143, 1826, 2022
AsuC2I CCSGG 2 cut(s) 657, 909
AsuHPI GGTGA 6 cut(s) 45, 254, 413, 445, 840, 1748
AsuNHI GCTAGC 3 cut(s) 566, 749, 2108
AvaI CYCGRG 1 cut(s) 720
AvaII GGWCC 3 cut(s) 4, 1826, 2022
BaeGI GKGCMC 1 cut(s) 719
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 2 cut(s) 45, 495
Bbv12I GWGCWC 2 cut(s) 45, 495
BbvI GCAGC 3 cut(s) 940, 1560, 1958
BccI CCATC 7 cut(s) 424, 430, 815, 939, 1001, 1459, 1664
BciT130I CCWGG 4 cut(s) 201, 1319, 1467, 1617
BclI TGATCA 2 cut(s) 915, 1216
BcnI CCSGG 2 cut(s) 657, 909
BcoDI GTCTC 3 cut(s) 60, 803, 1386
BfaI CTAG 5 cut(s) 567, 711, 750, 1884, 2109
BfmI CTRYAG 1 cut(s) 1488
BfuAI ACCTGC 1 cut(s) 633
BisI GCNGC 3 cut(s) 929, 1574, 1947
BlsI GCNGC 3 cut(s) 930, 1575, 1948
BmcAI AGTACT 1 cut(s) 2062
Bme1390I CCNGG 6 cut(s) 201, 657, 909, 1319, 1467, 1617
Bme18I GGWCC 3 cut(s) 4, 1826, 2022
BmeT110I CYCGRG 1 cut(s) 720
BmgT120I GGNCC 5 cut(s) 4, 167, 1143, 1826, 2022
BmiI GGNNCC 2 cut(s) 718, 2023
BmrFI CCNGG 6 cut(s) 201, 657, 909, 1319, 1467, 1617
BmsI GCATC 4 cut(s) 849, 1124, 1784, 2097
BmtI GCTAGC 3 cut(s) 570, 753, 2112
BpmI CTGGAG 2 cut(s) 1599, 1842
BpuEI CTTGAG 3 cut(s) 479, 1000, 1159
BpuMI CCSGG 2 cut(s) 657, 909
BsaHI GRCGYC 1 cut(s) 1021
BsaI GGTCTC 2 cut(s) 60, 1386
BsaJI CCNNGG 6 cut(s) 21, 199, 200, 907, 1317, 2025
BsaWI WCCGGW 2 cut(s) 13, 100
Bsc4I CCNNNNNNNGG 5 cut(s) 13, 62, 164, 187, 908
Bse118I RCCGGY 1 cut(s) 100
Bse1I ACTGG 3 cut(s) 64, 1052, 1146
Bse3DI GCAATG 2 cut(s) 693, 1206
BseBI CCWGG 4 cut(s) 201, 1319, 1467, 1617
BseDI CCNNGG 6 cut(s) 21, 199, 200, 907, 1317, 2025
BseGI GGATG 7 cut(s) 1114, 1451, 1462, 1527, 1669, 1840, 1999
BseLI CCNNNNNNNGG 5 cut(s) 13, 62, 164, 187, 908
BseMI GCAATG 2 cut(s) 693, 1206
BseNI ACTGG 3 cut(s) 64, 1052, 1146
BseRI GAGGAG 2 cut(s) 136, 997
BseSI GKGCMC 1 cut(s) 719
BseXI GCAGC 3 cut(s) 940, 1560, 1958
BsgI GTGCAG 1 cut(s) 661
Bsh1236I CGCG 1 cut(s) 553
BshFI GGCC 3 cut(s) 169, 1145, 2030
BshNI GGYRCC 1 cut(s) 716
BshTI ACCGGT 1 cut(s) 100
BsiHKAI GWGCWC 2 cut(s) 45, 495
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 5 cut(s) 14, 101, 656, 909, 1002
BslFI GGGAC 2 cut(s) 962, 1999
BslI CCNNNNNNNGG 5 cut(s) 13, 62, 164, 187, 908
BsmAI GTCTC 3 cut(s) 60, 803, 1386
BsmFI GGGAC 2 cut(s) 962, 1999
BsmI GAATGC 3 cut(s) 182, 1120, 1303
BsnI GGCC 3 cut(s) 169, 1145, 2030
Bso31I GGTCTC 2 cut(s) 60, 1386
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 3 cut(s) 45, 495, 719
Bsp1407I TGTACA 1 cut(s) 1459
Bsp143I GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 5 cut(s) 564, 738, 999, 1187, 1956
BspANI GGCC 3 cut(s) 169, 1145, 2030
BspFNI CGCG 1 cut(s) 553
BspHI TCATGA 1 cut(s) 1519
BspLI GGNNCC 2 cut(s) 718, 2023
BspMI ACCTGC 1 cut(s) 633
BspOI GCTAGC 3 cut(s) 570, 753, 2112
BspPI GGATC 3 cut(s) 1239, 1438, 1504
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 1 cut(s) 716
BspTNI GGTCTC 2 cut(s) 60, 1386
BsrDI GCAATG 2 cut(s) 693, 1206
BsrFI RCCGGY 1 cut(s) 100
BsrGI TGTACA 1 cut(s) 1459
BsrI ACTGG 3 cut(s) 64, 1052, 1146
BssAI RCCGGY 1 cut(s) 100
BssECI CCNNGG 6 cut(s) 21, 199, 200, 907, 1317, 2025
BssMI GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
BssNI GRCGYC 1 cut(s) 1021
BssT1I CCWWGG 2 cut(s) 21, 2025
Bst2UI CCWGG 4 cut(s) 201, 1319, 1467, 1617
Bst4CI ACNGT 3 cut(s) 8, 1742, 1901
Bst6I CTCTTC 4 cut(s) 24, 33, 501, 1068
BstACI GRCGYC 1 cut(s) 1021
BstAUI TGTACA 1 cut(s) 1459
BstC8I GCNNGC 5 cut(s) 568, 751, 2086, 2110, 2165
BstDEI CTNAG 2 cut(s) 896, 1500
BstDSI CCRYGG 1 cut(s) 21
BstF5I GGATG 7 cut(s) 1114, 1451, 1462, 1527, 1669, 1840, 1999
BstFNI CGCG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 555
BstKTI GATC 6 cut(s) 918, 1219, 1247, 1433, 1499, 1982
BstMAI GTCTC 3 cut(s) 60, 803, 1386
BstMBI GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
BstMWI GCNNNNNNNGC 2 cut(s) 746, 1955
BstNI CCWGG 4 cut(s) 201, 1319, 1467, 1617
BstNSI RCATGY 3 cut(s) 1088, 1734, 1893
BstSCI CCNGG 6 cut(s) 199, 655, 907, 1317, 1465, 1615
BstSFI CTRYAG 1 cut(s) 1488
BstSLI GKGCMC 1 cut(s) 719
BstUI CGCG 1 cut(s) 553
BstV1I GCAGC 3 cut(s) 940, 1560, 1958
BstX2I RGATCY 1 cut(s) 1496
BstYI RGATCY 1 cut(s) 1496
BsuRI GGCC 3 cut(s) 169, 1145, 2030
BtgI CCRYGG 1 cut(s) 21
BtsCI GGATG 7 cut(s) 1114, 1451, 1462, 1527, 1669, 1840, 1999
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 6 cut(s) 607, 1038, 1153, 1747, 1906, 2148
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 5 cut(s) 568, 751, 2086, 2110, 2165
CciI TCATGA 1 cut(s) 1519
CfoI GCGC 1 cut(s) 555
Cfr10I RCCGGY 1 cut(s) 100
Cfr13I GGNCC 5 cut(s) 4, 167, 1143, 1826, 2022
CseI GACGC 2 cut(s) 537, 1010
Csp6I GTAC 6 cut(s) 316, 660, 1167, 1180, 1460, 2061
CspAI ACCGGT 1 cut(s) 100
CviQI GTAC 6 cut(s) 316, 660, 1167, 1180, 1460, 2061
DdeI CTNAG 2 cut(s) 896, 1500
DpnI GATC 6 cut(s) 917, 1218, 1246, 1432, 1498, 1981
DpnII GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
Eam1104I CTCTTC 4 cut(s) 24, 33, 501, 1068
EarI CTCTTC 4 cut(s) 24, 33, 501, 1068
EciI GGCGGA 1 cut(s) 988
Ecl136II GAGCTC 2 cut(s) 43, 493
Eco130I CCWWGG 2 cut(s) 21, 2025
Eco24I GRGCYC 2 cut(s) 45, 495
Eco31I GGTCTC 2 cut(s) 60, 1386
Eco47I GGWCC 3 cut(s) 4, 1826, 2022
Eco53kI GAGCTC 2 cut(s) 43, 493
Eco57I CTGAAG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 720
EcoICRI GAGCTC 2 cut(s) 43, 493
EcoRI GAATTC 3 cut(s) 194, 210, 778
EcoRII CCWGG 4 cut(s) 199, 1317, 1465, 1615
EcoT14I CCWWGG 2 cut(s) 21, 2025
EcoT22I ATGCAT 1 cut(s) 1086
EcoT38I GRGCYC 2 cut(s) 45, 495
ErhI CCWWGG 2 cut(s) 21, 2025
FalI AAGNNNNNCTT 6 cut(s) 498, 530, 609, 641, 671, 703
FaqI GGGAC 2 cut(s) 962, 1999
FauI CCCGC 1 cut(s) 745
FbaI TGATCA 2 cut(s) 915, 1216
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 3 cut(s) 929, 1574, 1947
FokI GGATG 7 cut(s) 1121, 1438, 1449, 1514, 1676, 1847, 2006
FriOI GRGCYC 2 cut(s) 45, 495
Fsp4HI GCNGC 3 cut(s) 929, 1574, 1947
FspBI CTAG 5 cut(s) 567, 711, 750, 1884, 2109
GlaI GCGC 1 cut(s) 554
GluI GCNGC 3 cut(s) 929, 1574, 1947
GsuI CTGGAG 2 cut(s) 1599, 1842
HaeIII GGCC 3 cut(s) 169, 1145, 2030
HapII CCGG 5 cut(s) 14, 101, 656, 909, 1002
HgaI GACGC 2 cut(s) 537, 1010
HhaI GCGC 1 cut(s) 555
Hin1I GRCGYC 1 cut(s) 1021
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HincII GTYRAC 3 cut(s) 244, 465, 2095
HindII GTYRAC 3 cut(s) 244, 465, 2095
HindIII AAGCTT 1 cut(s) 2225
HinfI GANTC 9 cut(s) 137, 461, 794, 995, 1273, 1368, 1516, 1556, 1601
HpaII CCGG 5 cut(s) 14, 101, 656, 909, 1002
HphI GGTGA 6 cut(s) 45, 254, 413, 445, 840, 1748
Hpy166II GTNNAC 4 cut(s) 11, 244, 465, 2095
Hpy188III TCNNGA 7 cut(s) 221, 479, 1070, 1158, 1220, 1285, 1520
Hpy8I GTNNAC 4 cut(s) 11, 244, 465, 2095
Hpy99I CGWCG 2 cut(s) 316, 553
HpyCH4III ACNGT 3 cut(s) 8, 1742, 1901
HpyCH4IV ACGT 1 cut(s) 314
HpyF10VI GCNNNNNNNGC 2 cut(s) 746, 1955
HpyF3I CTNAG 2 cut(s) 896, 1500
HpySE526I ACGT 1 cut(s) 314
Hsp92I GRCGYC 1 cut(s) 1021
HspAI GCGC 1 cut(s) 553
Ksp22I TGATCA 2 cut(s) 915, 1216
Kzo9I GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 2 cut(s) 610, 1570
Lsp1109I GCAGC 3 cut(s) 940, 1560, 1958
LweI GCATC 4 cut(s) 849, 1124, 1784, 2097
MaeI CTAG 5 cut(s) 567, 711, 750, 1884, 2109
MaeII ACGT 1 cut(s) 314
MaeIII GTNAC 3 cut(s) 846, 1736, 1895
MalI GATC 6 cut(s) 917, 1218, 1246, 1432, 1498, 1981
MboI GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
MfeI CAATTG 2 cut(s) 786, 1941
MflI RGATCY 1 cut(s) 1496
MhlI GDGCHC 3 cut(s) 45, 495, 719
MlyI GAGTC 3 cut(s) 470, 989, 1282
Mph1103I ATGCAT 1 cut(s) 1086
MroXI GAANNNNTTC 2 cut(s) 584, 621
MseI TTAA 6 cut(s) 123, 516, 1719, 1851, 2148, 2189
MspA1I CMGCKG 1 cut(s) 1958
MspI CCGG 5 cut(s) 14, 101, 656, 909, 1002
MspR9I CCNGG 6 cut(s) 201, 657, 909, 1319, 1467, 1617
MunI CAATTG 2 cut(s) 786, 1941
Mva1269I GAATGC 3 cut(s) 182, 1120, 1303
MvaI CCWGG 4 cut(s) 201, 1319, 1467, 1617
MvnI CGCG 1 cut(s) 553
MwoI GCNNNNNNNGC 2 cut(s) 746, 1955
NciI CCSGG 2 cut(s) 657, 909
NcoI CCATGG 1 cut(s) 21
NdeII GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
NheI GCTAGC 3 cut(s) 566, 749, 2108
NlaIV GGNNCC 2 cut(s) 718, 2023
NmuCI GTSAC 3 cut(s) 846, 1736, 1895
NsiI ATGCAT 1 cut(s) 1086
NspI RCATGY 3 cut(s) 1088, 1734, 1893
PagI TCATGA 1 cut(s) 1519
PasI CCCWGGG 1 cut(s) 200
PciI ACATGT 2 cut(s) 1730, 1889
PciSI GCTCTTC 1 cut(s) 33
PctI GAATGC 3 cut(s) 182, 1120, 1303
PdmI GAANNNNTTC 2 cut(s) 584, 621
PfeI GAWTC 6 cut(s) 137, 794, 1368, 1516, 1556, 1601
PflMI CCANNNNNTGG 1 cut(s) 164
PfoI TCCNGGA 1 cut(s) 1615
PinAI ACCGGT 1 cut(s) 100
PkrI GCNGC 3 cut(s) 930, 1575, 1948
PleI GAGTC 3 cut(s) 469, 989, 1281
PpsI GAGTC 3 cut(s) 469, 989, 1281
PscI ACATGT 2 cut(s) 1730, 1889
PsiI TTATAA 3 cut(s) 666, 759, 2177
Psp124BI GAGCTC 2 cut(s) 45, 495
Psp6I CCWGG 4 cut(s) 199, 1317, 1465, 1615
PspGI CCWGG 4 cut(s) 199, 1317, 1465, 1615
PspN4I GGNNCC 2 cut(s) 718, 2023
PspPI GGNCC 5 cut(s) 4, 167, 1143, 1826, 2022
PsuI RGATCY 1 cut(s) 1496
RsaI GTAC 6 cut(s) 317, 661, 1168, 1181, 1461, 2062
RsaNI GTAC 6 cut(s) 316, 660, 1167, 1180, 1460, 2061
SacI GAGCTC 2 cut(s) 45, 495
SalI GTCGAC 1 cut(s) 463
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 6 cut(s) 123, 516, 1719, 1851, 2148, 2189
SatI GCNGC 3 cut(s) 929, 1574, 1947
Sau3AI GATC 6 cut(s) 915, 1216, 1244, 1430, 1496, 1979
Sau96I GGNCC 5 cut(s) 4, 167, 1143, 1826, 2022
ScaI AGTACT 1 cut(s) 2062
SchI GAGTC 3 cut(s) 470, 989, 1282
ScrFI CCNGG 6 cut(s) 201, 657, 909, 1319, 1467, 1617
SduI GDGCHC 3 cut(s) 45, 495, 719
SfaNI GCATC 4 cut(s) 849, 1124, 1784, 2097
SfcI CTRYAG 1 cut(s) 1488
SinI GGWCC 3 cut(s) 4, 1826, 2022
SmlI CTYRAG 3 cut(s) 494, 979, 1138
SmoI CTYRAG 3 cut(s) 494, 979, 1138
SsiI CCGC 5 cut(s) 564, 738, 999, 1187, 1956
SspMI CTAG 5 cut(s) 567, 711, 750, 1884, 2109
SstI GAGCTC 2 cut(s) 45, 495
StyD4I CCNGG 6 cut(s) 199, 655, 907, 1317, 1465, 1615
StyI CCWWGG 2 cut(s) 21, 2025
TaaI ACNGT 3 cut(s) 8, 1742, 1901
TaiI ACGT 1 cut(s) 317
TaqI TCGA 5 cut(s) 311, 464, 943, 1243, 1878
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 2 cut(s) 1459, 2060
TfiI GAWTC 6 cut(s) 137, 794, 1368, 1516, 1556, 1601
Tru1I TTAA 6 cut(s) 123, 516, 1719, 1851, 2148, 2189
Tru9I TTAA 6 cut(s) 123, 516, 1719, 1851, 2148, 2189
TscAI CASTG 6 cut(s) 607, 1045, 1153, 1747, 1906, 2148
TseFI GTSAC 3 cut(s) 846, 1736, 1895
TseI GCWGC 3 cut(s) 928, 1573, 1946
Tsp45I GTSAC 3 cut(s) 846, 1736, 1895
TspGWI ACGGA 2 cut(s) 106, 439
TspRI CASTG 6 cut(s) 607, 1045, 1153, 1747, 1906, 2148
Van91I CCANNNNNTGG 1 cut(s) 164
VpaK11BI GGWCC 3 cut(s) 4, 1826, 2022
XapI RAATTY 6 cut(s) 194, 210, 778, 1289, 1564, 1706
XceI RCATGY 3 cut(s) 1088, 1734, 1893
XmiI GTMKAC 1 cut(s) 464
XmnI GAANNNNTTC 2 cut(s) 584, 621
XspI CTAG 5 cut(s) 567, 711, 750, 1884, 2109
ZrmI AGTACT 1 cut(s) 2062
Zsp2I ATGCAT 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.