Rroxscaffold_1G00042350

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Reverse (-)
60432054 .. 60435502
3449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042350.1

Sequence Viewer

Length: 1170 bp
ATGTTTGAAGCCGTTGAGCATTCCCCTCACTCCAAAAGGCCAAAACTTTCTCCCTTCCCTAGCTGCAAGGAGACTCCGCCGGAAACCATGGTTGAAGAGAAAGAAGACCTCATGATTTCACCAACTGGTGGACACCCATTTCACAAAACAGCCCACTATCTCAAACCCATTTCGCCTTCCTCCCTTTACGAGTCTTTCACCTCCCATATCCCCACCTCACCCTTAGACCAAAAAAAGTGGCCATCCCAGCTTCAGTTCCGTGGATGGCGCCGCGACCACCAAGACTTGCTGACTTGGGTTCACCACTTGGCTTCTACTCACCAATCCACGTGGAAGAAAGCCGGCATTTACGAACCCATCTTCAACTCGACTTACCAGATAAGAAGAAACAACGACCTGGTTTGTGGGTTTGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATTTTTCCATGGGGAGAAGCCACAATCACATTGGAGGATGTAATGGTTTTGGGAGGCTTCTCTGTTTTGGGAGACTGTATTTTGAGTCCTATTGAAAGCAGAGAGCTGAAAGAAATAGAAGAGAAACTTGAGAAAGAGCGAAAAAGACTTTACGATTACAGTGGGCGTGGGTCTAAGTTGGCCAGCGCAGAGTTATGGATGAAGAAATTCATGAAGAGCGGGAGTAAACTAGAGCACCTAGCATTTCTCGTCTTTTGGTTGTCCAGGTATGTTTTCCACGGCAGTCGTGATTCAGTAAACAAGGCTGTTTTCTCCATTGCAATTCATTTAGATAGGGGCATTCGGATTGCGCTTGCGCCGGCTGTTCTTGCTCACATTTATGGAGATTTGAGTCTGCTTAAAAGGACTATTGTAGCTTCAAATGCCAGTAATGAATTAAAGCTAGAGTCACCATTTCAGTTAGTTCAGGTTTGGGCATGGGAAAGGTTTTTGGAACTTAGGCCAAAGCCCAATGTTATGAGCTATGCTGAGCCAAGATTGGCTAGATGGGATAGAATGGATGGTCAGGATTTTAGAAATTTGAGGATTGTTTTAGACTCTGCTGGAGAATGTTTCATGTGGCGCCCTTATGCCATTGCCATTGAAAACTGGAAGCTTCCTAGCCAAGGTGATCGTAGCGATGTGGTTAGAGCTCTAACGTGTGGTCAAGATGGACCAAAGGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

389

Amino Acids

44.75

Weight (kDa)

8.55

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 115 - 370 4.5e-83 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 267, 1065
AccB7I CCANNNNNTGG 1 cut(s) 128
AccBSI CCGCTC 1 cut(s) 663
AccII CGCG 1 cut(s) 273
AciI CCGC 3 cut(s) 77, 271, 663
AcoI YGGCCR 2 cut(s) 239, 624
AcsI RAATTY 2 cut(s) 650, 1021
AcuI CTGAAG 1 cut(s) 236
AcvI CACGTG 1 cut(s) 330
AcyI GRCGYC 2 cut(s) 268, 1066
AfiI CCNNNNNNNGG 2 cut(s) 128, 1109
AflIII ACRYGT 1 cut(s) 1142
AgsI TTSAA 6 cut(s) 8, 95, 364, 539, 864, 1088
AjnI CCWGG 2 cut(s) 396, 707
AluBI AGCT 8 cut(s) 63, 250, 550, 860, 886, 966, 1099, 1136
AluI AGCT 8 cut(s) 63, 250, 550, 860, 886, 966, 1099, 1136
Alw21I GWGCWC 2 cut(s) 681, 1138
Alw26I GTCTC 3 cut(s) 65, 425, 510
AoxI GGCC 4 cut(s) 38, 239, 624, 944
ApeKI GCWGC 1 cut(s) 63
ApoI RAATTY 2 cut(s) 650, 1021
Asp700I GAANNNNTTC 1 cut(s) 650
AspLEI GCGC 5 cut(s) 270, 632, 796, 802, 1068
AspS9I GGNCC 1 cut(s) 1157
AsuHPI GGTGA 7 cut(s) 111, 190, 210, 293, 311, 885, 1124
AvaII GGWCC 1 cut(s) 1157
BalI TGGCCA 2 cut(s) 241, 626
BanI GGYRCC 2 cut(s) 267, 1065
BanII GRGCYC 1 cut(s) 1138
BbrPI CACGTG 1 cut(s) 330
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 2 cut(s) 681, 1138
BbvI GCAGC 1 cut(s) 50
BccI CCATC 6 cut(s) 250, 258, 365, 984, 998, 1148
BceAI ACGGC 1 cut(s) 739
BciT130I CCWGG 2 cut(s) 398, 709
BcoDI GTCTC 3 cut(s) 65, 425, 510
BfaI CTAG 6 cut(s) 60, 674, 683, 887, 987, 1104
BfoI RGCGCY 2 cut(s) 271, 1069
BisI GCNGC 2 cut(s) 64, 271
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 2 cut(s) 65, 272
Bme1390I CCNGG 2 cut(s) 398, 709
Bme18I GGWCC 1 cut(s) 1157
BmgT120I GGNCC 1 cut(s) 1157
BmiI GGNNCC 2 cut(s) 269, 1067
BmrFI CCNGG 2 cut(s) 398, 709
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 1068
Bpu1102I GCTNAGC 1 cut(s) 972
BpuEI CTTGAG 1 cut(s) 593
BsaAI YACGTR 1 cut(s) 330
BsaHI GRCGYC 2 cut(s) 268, 1066
BsaI GGTCTC 1 cut(s) 425
BsaJI CCNNGG 5 cut(s) 87, 259, 452, 721, 1108
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 1109
Bse118I RCCGGY 2 cut(s) 341, 802
Bse1I ACTGG 3 cut(s) 130, 870, 1097
Bse3DI GCAATG 2 cut(s) 759, 1077
BseBI CCWGG 2 cut(s) 398, 709
BseDI CCNNGG 5 cut(s) 87, 259, 452, 721, 1108
BseGI GGATG 5 cut(s) 242, 269, 487, 648, 1009
BseLI CCNNNNNNNGG 2 cut(s) 128, 1109
BseMI GCAATG 2 cut(s) 759, 1077
BseMII CTCAG 1 cut(s) 963
BseNI ACTGG 3 cut(s) 130, 870, 1097
BseXI GCAGC 1 cut(s) 50
BseYI CCCAGC 1 cut(s) 246
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 4 cut(s) 40, 241, 626, 946
BshNI GGYRCC 2 cut(s) 267, 1065
BsiHKAI GWGCWC 2 cut(s) 681, 1138
BsiSI CCGG 3 cut(s) 80, 342, 803
BslI CCNNNNNNNGG 2 cut(s) 128, 1109
BsmAI GTCTC 3 cut(s) 65, 425, 510
BsmI GAATGC 2 cut(s) 19, 783
BsnI GGCC 4 cut(s) 40, 241, 626, 946
Bso31I GGTCTC 1 cut(s) 425
Bsp1286I GDGCHC 2 cut(s) 681, 1138
Bsp143I GATC 1 cut(s) 1114
Bsp1720I GCTNAGC 1 cut(s) 972
Bsp19I CCATGG 2 cut(s) 87, 452
BspACI CCGC 3 cut(s) 77, 271, 663
BspANI GGCC 4 cut(s) 40, 241, 626, 946
BspCNI CTCAG 1 cut(s) 964
BspFNI CGCG 1 cut(s) 273
BspHI TCATGA 2 cut(s) 111, 654
BspLI GGNNCC 2 cut(s) 269, 1067
BspQI GCTCTTC 1 cut(s) 653
BspT107I GGYRCC 2 cut(s) 267, 1065
BspTNI GGTCTC 1 cut(s) 425
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 2 cut(s) 759, 1077
BsrFI RCCGGY 2 cut(s) 341, 802
BsrI ACTGG 3 cut(s) 130, 870, 1097
BssAI RCCGGY 2 cut(s) 341, 802
BssECI CCNNGG 5 cut(s) 87, 259, 452, 721, 1108
BssMI GATC 1 cut(s) 1114
BssNI GRCGYC 2 cut(s) 268, 1066
BssT1I CCWWGG 3 cut(s) 87, 452, 1108
Bst2UI CCWGG 2 cut(s) 398, 709
Bst4CI ACNGT 2 cut(s) 521, 605
Bst6I CTCTTC 3 cut(s) 90, 558, 653
BstACI GRCGYC 2 cut(s) 268, 1066
BstBAI YACGTR 1 cut(s) 330
BstC8I GCNNGC 4 cut(s) 343, 628, 798, 804
BstDEI CTNAG 4 cut(s) 223, 618, 941, 972
BstDSI CCRYGG 4 cut(s) 87, 259, 452, 721
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 5 cut(s) 242, 269, 487, 648, 1009
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 2 cut(s) 271, 1069
BstHHI GCGC 5 cut(s) 270, 632, 796, 802, 1068
BstKTI GATC 1 cut(s) 1117
BstMAI GTCTC 3 cut(s) 65, 425, 510
BstMBI GATC 1 cut(s) 1114
BstMWI GCNNNNNNNGC 3 cut(s) 247, 812, 866
BstNI CCWGG 2 cut(s) 398, 709
BstSCI CCNGG 2 cut(s) 396, 707
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 1 cut(s) 50
BstV2I GAAGAC 1 cut(s) 111
BsuRI GGCC 4 cut(s) 40, 241, 626, 946
BtgI CCRYGG 4 cut(s) 87, 259, 452, 721
BtgZI GCGATG 1 cut(s) 1137
BtsCI GGATG 5 cut(s) 242, 269, 487, 648, 1009
BtsIMutI CAGTG 1 cut(s) 610
Cac8I GCNNGC 4 cut(s) 343, 628, 798, 804
CciI TCATGA 2 cut(s) 111, 654
CfoI GCGC 5 cut(s) 270, 632, 796, 802, 1068
Cfr10I RCCGGY 2 cut(s) 341, 802
Cfr13I GGNCC 1 cut(s) 1157
CsiI ACCWGGT 1 cut(s) 396
CspCI CAANNNNNGTGG 4 cut(s) 218, 253, 311, 346
CviAII CATG 6 cut(s) 88, 112, 453, 655, 921, 1060
DdeI CTNAG 4 cut(s) 223, 618, 941, 972
DinI GGCGCC 2 cut(s) 269, 1067
DpnI GATC 1 cut(s) 1116
DpnII GATC 1 cut(s) 1114
EaeI YGGCCR 2 cut(s) 239, 624
Eam1104I CTCTTC 3 cut(s) 90, 558, 653
EarI CTCTTC 3 cut(s) 90, 558, 653
EciI GGCGGA 1 cut(s) 66
Ecl136II GAGCTC 1 cut(s) 1136
Eco130I CCWWGG 3 cut(s) 87, 452, 1108
Eco24I GRGCYC 1 cut(s) 1138
Eco31I GGTCTC 1 cut(s) 425
Eco47I GGWCC 1 cut(s) 1157
Eco53kI GAGCTC 1 cut(s) 1136
Eco57I CTGAAG 1 cut(s) 236
Eco72I CACGTG 1 cut(s) 330
EcoICRI GAGCTC 1 cut(s) 1136
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoRII CCWGG 2 cut(s) 396, 707
EcoT14I CCWWGG 3 cut(s) 87, 452, 1108
EcoT38I GRGCYC 1 cut(s) 1138
EgeI GGCGCC 2 cut(s) 269, 1067
EheI GGCGCC 2 cut(s) 269, 1067
ErhI CCWWGG 3 cut(s) 87, 452, 1108
FaeI CATG 6 cut(s) 91, 115, 456, 658, 924, 1063
FalI AAGNNNNNCTT 2 cut(s) 555, 587
FatI CATG 6 cut(s) 87, 111, 452, 654, 920, 1059
FauI CCCGC 1 cut(s) 656
Fnu4HI GCNGC 2 cut(s) 64, 271
FokI GGATG 5 cut(s) 229, 276, 494, 655, 1016
FriOI GRGCYC 1 cut(s) 1138
Fsp4HI GCNGC 2 cut(s) 64, 271
FspBI CTAG 6 cut(s) 60, 674, 683, 887, 987, 1104
GlaI GCGC 5 cut(s) 269, 631, 795, 801, 1067
GluI GCNGC 2 cut(s) 64, 271
GsaI CCCAGC 1 cut(s) 250
GsuI CTGGAG 1 cut(s) 1068
HaeII RGCGCY 2 cut(s) 271, 1069
HaeIII GGCC 4 cut(s) 40, 241, 626, 946
HapII CCGG 3 cut(s) 80, 342, 803
HhaI GCGC 5 cut(s) 270, 632, 796, 802, 1068
Hin1I GRCGYC 2 cut(s) 268, 1066
Hin1II CATG 6 cut(s) 91, 115, 456, 658, 924, 1063
Hin6I GCGC 5 cut(s) 268, 630, 794, 800, 1066
HinP1I GCGC 5 cut(s) 268, 630, 794, 800, 1066
HindIII AAGCTT 1 cut(s) 1097
HinfI GANTC 7 cut(s) 73, 191, 529, 734, 835, 890, 1040
HpaII CCGG 3 cut(s) 80, 342, 803
HphI GGTGA 7 cut(s) 111, 190, 210, 293, 311, 885, 1124
Hpy166II GTNNAC 4 cut(s) 131, 301, 671, 742
Hpy188I TCNGA 1 cut(s) 789
Hpy188III TCNNGA 5 cut(s) 112, 655, 731, 1010, 1151
Hpy8I GTNNAC 4 cut(s) 131, 301, 671, 742
HpyAV CCTTC 3 cut(s) 64, 186, 451
HpyCH4III ACNGT 2 cut(s) 521, 605
HpyCH4IV ACGT 2 cut(s) 329, 1142
HpyCH4V TGCA 3 cut(s) 66, 413, 764
HpyF10VI GCNNNNNNNGC 3 cut(s) 247, 812, 866
HpyF3I CTNAG 4 cut(s) 223, 618, 941, 972
HpySE526I ACGT 2 cut(s) 329, 1142
Hsp92I GRCGYC 2 cut(s) 268, 1066
Hsp92II CATG 6 cut(s) 91, 115, 456, 658, 924, 1063
HspAI GCGC 5 cut(s) 268, 630, 794, 800, 1066
KasI GGCGCC 2 cut(s) 267, 1065
KroI GCCGGC 2 cut(s) 341, 802
KroNI GCCGGC 2 cut(s) 343, 804
Kzo9I GATC 1 cut(s) 1114
LguI GCTCTTC 1 cut(s) 653
Lsp1109I GCAGC 1 cut(s) 50
MabI ACCWGGT 1 cut(s) 396
MaeI CTAG 6 cut(s) 60, 674, 683, 887, 987, 1104
MaeII ACGT 2 cut(s) 329, 1142
MaeIII GTNAC 1 cut(s) 891
MalI GATC 1 cut(s) 1116
MbiI CCGCTC 1 cut(s) 663
MboI GATC 1 cut(s) 1114
MboII GAAGA 8 cut(s) 107, 116, 346, 352, 396, 575, 658, 670
MhlI GDGCHC 2 cut(s) 681, 1138
MlsI TGGCCA 2 cut(s) 241, 626
MluCI AATT 4 cut(s) 650, 765, 878, 1021
MluNI TGGCCA 2 cut(s) 241, 626
Mly113I GGCGCC 2 cut(s) 268, 1066
MlyI GAGTC 6 cut(s) 67, 200, 538, 844, 899, 1034
MnlI CCTC 8 cut(s) 36, 119, 190, 211, 226, 472, 491, 1020
Mox20I TGGCCA 2 cut(s) 241, 626
MroNI GCCGGC 2 cut(s) 341, 802
MroXI GAANNNNTTC 1 cut(s) 650
MscI TGGCCA 2 cut(s) 241, 626
MseI TTAA 2 cut(s) 843, 881
MslI CAYNNNNRTG 1 cut(s) 822
Msp20I TGGCCA 2 cut(s) 241, 626
MspI CCGG 3 cut(s) 80, 342, 803
MspR9I CCNGG 2 cut(s) 398, 709
Mva1269I GAATGC 2 cut(s) 19, 783
MvaI CCWGG 2 cut(s) 398, 709
MvnI CGCG 1 cut(s) 273
MwoI GCNNNNNNNGC 3 cut(s) 247, 812, 866
NaeI GCCGGC 2 cut(s) 343, 804
NarI GGCGCC 2 cut(s) 268, 1066
NcoI CCATGG 2 cut(s) 87, 452
NdeII GATC 1 cut(s) 1114
NgoMIV GCCGGC 2 cut(s) 341, 802
NlaIII CATG 6 cut(s) 91, 115, 456, 658, 924, 1063
NlaIV GGNNCC 2 cut(s) 269, 1067
NmuCI GTSAC 1 cut(s) 891
PagI TCATGA 2 cut(s) 111, 654
PciSI GCTCTTC 1 cut(s) 653
PctI GAATGC 2 cut(s) 19, 783
PdiI GCCGGC 2 cut(s) 343, 804
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 1 cut(s) 734
PflMI CCANNNNNTGG 1 cut(s) 128
PkrI GCNGC 2 cut(s) 65, 272
PleI GAGTC 6 cut(s) 67, 199, 537, 843, 898, 1034
PluTI GGCGCC 2 cut(s) 271, 1069
PmaCI CACGTG 1 cut(s) 330
PmlI CACGTG 1 cut(s) 330
PpsI GAGTC 6 cut(s) 67, 199, 537, 843, 898, 1034
Ppu21I YACGTR 1 cut(s) 330
Psp124BI GAGCTC 1 cut(s) 1138
Psp6I CCWGG 2 cut(s) 396, 707
PspCI CACGTG 1 cut(s) 330
PspFI CCCAGC 1 cut(s) 246
PspGI CCWGG 2 cut(s) 396, 707
PspN4I GGNNCC 2 cut(s) 269, 1067
PspPI GGNCC 1 cut(s) 1157
RseI CAYNNNNRTG 1 cut(s) 822
SacI GAGCTC 1 cut(s) 1138
SapI GCTCTTC 1 cut(s) 653
SaqAI TTAA 2 cut(s) 843, 881
SatI GCNGC 2 cut(s) 64, 271
Sau3AI GATC 1 cut(s) 1114
Sau96I GGNCC 1 cut(s) 1157
SchI GAGTC 6 cut(s) 67, 200, 538, 844, 899, 1034
ScrFI CCNGG 2 cut(s) 398, 709
SduI GDGCHC 2 cut(s) 681, 1138
SexAI ACCWGGT 1 cut(s) 396
SfoI GGCGCC 2 cut(s) 269, 1067
SinI GGWCC 1 cut(s) 1157
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 4 cut(s) 650, 765, 878, 1021
SsiI CCGC 3 cut(s) 77, 271, 663
SspDI GGCGCC 2 cut(s) 267, 1065
SspMI CTAG 6 cut(s) 60, 674, 683, 887, 987, 1104
SstI GAGCTC 1 cut(s) 1138
StyD4I CCNGG 2 cut(s) 396, 707
StyI CCWWGG 3 cut(s) 87, 452, 1108
TaaI ACNGT 2 cut(s) 521, 605
TaiI ACGT 2 cut(s) 332, 1145
TaqI TCGA 1 cut(s) 368
TasI AATT 4 cut(s) 650, 765, 878, 1021
TauI GCSGC 1 cut(s) 273
TfiI GAWTC 1 cut(s) 734
Tru1I TTAA 2 cut(s) 843, 881
Tru9I TTAA 2 cut(s) 843, 881
TscAI CASTG 1 cut(s) 610
TseFI GTSAC 1 cut(s) 891
TseI GCWGC 1 cut(s) 63
Tsp45I GTSAC 1 cut(s) 891
TspDTI ATGAA 7 cut(s) 433, 643, 659, 671, 758, 891, 1048
TspGWI ACGGA 1 cut(s) 248
TspRI CASTG 1 cut(s) 610
Van91I CCANNNNNTGG 1 cut(s) 128
VpaK11BI GGWCC 1 cut(s) 1157
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 2 cut(s) 650, 1021
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XmnI GAANNNNTTC 1 cut(s) 650
XspI CTAG 6 cut(s) 60, 674, 683, 887, 987, 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.