Rroxscaffold_1G00042320

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Forward (+)
60400080 .. 60401907
1828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042320.1

Sequence Viewer

Length: 1311 bp
ATGATGAGAGATAGAGGACAGCTGGGGACTGTTGTGAGAAAGAAAAGAGAAAGCAACGAGAAACCAGGAAAAGAAATAGAGAAAAGAAAGGGGAGCTTTTCGGTTTCCGGGGACTCTATTTTTAGTCCACTTGAAAGCATTGAACTGAAGGAACTGGAAGAGAAGTTGATTAAGGCAAGGAAACAAGTTAAGAGAGCGAGGGCAAGCAAATGGTTGCAGAAGTTTGTGAACAGTGAGAGTGAATTGGAGCATGAAGCATTTCTTGCCTTCTGGTTGTCAAGGTATGTTTTTTTCGATGGTGATAGTTTAATACAAAAGCGTGTTTTTCCCATTGCAATTCATTTAGCTAGGGGGACTCGAATTGCGCTTGCACAGCCTGTTCTTGCTGATATTTATAATGATTTGAGTTTGTTCAGTAATACAATTGTGGCTTCAAATAAATTAAAGACCGGTGATCGTGTCTTGAACGTGAAACTCAAGTCACCATTTCAATTAGTTCAGGTTTGGGCATGGGAAAGATTTTTGGAACTTAGGCCAATATTCAATGTCATCAAATATGGTGAGCCGAGATTGGCTCGATGGCATAAAGCAAATGGTCTGAGTATTGAAAATTTAAGAAGTGTTTTAGACTCAGCTGGAGATGCCTTCATGTGGCGCCCTTATGCCATGGCCATTGAGAACTGGAATTTTCCTAAATACTACTCGGAAAAGGAAATGTGGTTTGGTCCTGGTTTGGATGATGAGTTCCTGCAATTTTCCATGTTCTTGAGGGTGACGAAGTTAGTTGGATTCAATACTAGGAAACAATACTTTCCACATCGAGTTGCTATGCAATTTGGATATGATCAAGATATTCCATGTAAGATTGCTCAATCCAAAGTATCCAGGAAGCATTGCAGTGACAAACGTGAGATTGTAGGATTCTACATTGCATCCAGACTTTCTGAGCCGAATGTTAGTGCAAGATACTTGAAGTGGTGGAATGAATCAGTGTCAGGTCTCAAAGACACAAGTGAGGCCGGTATGCCCCAAAAGAAGAAAGCAAAGAGGATGGAAGGATCACTAGTAAGGGCTAAACAATCCCCAGTACATCCTGAATATCCTCTTAAGAAAAATTTAGAACGTTCTAAAAAGAGGAAGAGAAAGGAGAGCTTATGCTTTAGGCAGAGTGCCCCAGACATCATGGTTGAAGAAAAAGAAGAGCTTATGGTTTCACCAACTGGTGGAGAACCATTTTCCAAAAAAGCCTACTATCTGAAACCAGTTGTGCCTTCCTCCATTGAAAAGCCCCCTTTTAAGTTCCCTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

436

Amino Acids

50.6

Weight (kDa)

9.83

Isoelectric Point (pI)

52.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 32 - 328 3.8e-72 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
AccB1I GGYRCC 1 cut(s) 654
AccB7I CCANNNNNTGG 1 cut(s) 1223
AclI AACGTT 1 cut(s) 1123
AclWI GGATC 1 cut(s) 1066
AcoI YGGCCR 1 cut(s) 669
AcsI RAATTY 3 cut(s) 610, 685, 1114
AcuI CTGAAG 1 cut(s) 167
AcyI GRCGYC 1 cut(s) 655
AfaI GTAC 1 cut(s) 1089
AfiI CCNNNNNNNGG 2 cut(s) 651, 1223
AflII CTTAAG 1 cut(s) 1106
AgeI ACCGGT 1 cut(s) 449
AhlI ACTAGT 1 cut(s) 1063
AjnI CCWGG 3 cut(s) 64, 727, 884
AjuI GAANNNNNNNTTGG 2 cut(s) 705, 737
AloI GAACNNNNNNTCC 2 cut(s) 728, 760
AluBI AGCT 6 cut(s) 22, 96, 347, 635, 1152, 1204
AluI AGCT 6 cut(s) 22, 96, 347, 635, 1152, 1204
Alw26I GTCTC 1 cut(s) 1004
AlwI GGATC 1 cut(s) 1066
AoxI GGCC 3 cut(s) 533, 669, 1017
ApoI RAATTY 3 cut(s) 610, 685, 1114
AsiGI ACCGGT 1 cut(s) 449
Asp700I GAANNNNTTC 1 cut(s) 258
AspLEI GCGC 2 cut(s) 367, 657
AspS9I GGNCC 1 cut(s) 725
AsuC2I CCSGG 1 cut(s) 109
AsuHPI GGTGA 6 cut(s) 311, 464, 474, 572, 784, 1206
AvaII GGWCC 1 cut(s) 725
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 671
BanI GGYRCC 1 cut(s) 654
BccI CCATC 3 cut(s) 290, 573, 1045
BciT130I CCWGG 3 cut(s) 66, 729, 886
BciVI GTATCC 1 cut(s) 892
BclI TGATCA 1 cut(s) 844
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 1 cut(s) 1004
BcuI ACTAGT 1 cut(s) 1063
BfaI CTAG 4 cut(s) 348, 798, 1064, 1305
BfoI RGCGCY 1 cut(s) 658
BfrI CTTAAG 1 cut(s) 1106
BfuI GTATCC 1 cut(s) 892
Bme1390I CCNGG 4 cut(s) 66, 109, 729, 886
Bme18I GGWCC 1 cut(s) 725
BmgT120I GGNCC 1 cut(s) 725
BmiI GGNNCC 1 cut(s) 656
BmrFI CCNGG 4 cut(s) 66, 109, 729, 886
BmrI ACTGGG 1 cut(s) 1079
BmsI GCATC 2 cut(s) 631, 941
BmuI ACTGGG 1 cut(s) 1079
BplI GAGNNNNNCTC 2 cut(s) 559, 591
BpmI CTGGAG 1 cut(s) 657
BpuEI CTTGAG 2 cut(s) 461, 787
BpuMI CCSGG 1 cut(s) 109
BsaHI GRCGYC 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 1004
BsaJI CCNNGG 2 cut(s) 108, 666
BsaWI WCCGGW 1 cut(s) 449
Bsc4I CCNNNNNNNGG 2 cut(s) 651, 1223
Bse118I RCCGGY 2 cut(s) 449, 1019
Bse1I ACTGG 5 cut(s) 159, 686, 1085, 1225, 1262
Bse3DI GCAATG 3 cut(s) 330, 892, 927
BseBI CCWGG 3 cut(s) 66, 729, 886
BseDI CCNNGG 2 cut(s) 108, 666
BseGI GGATG 4 cut(s) 742, 932, 1056, 1090
BseLI CCNNNNNNNGG 2 cut(s) 651, 1223
BseMI GCAATG 3 cut(s) 330, 892, 927
BseMII CTCAG 3 cut(s) 590, 645, 936
BseNI ACTGG 5 cut(s) 159, 686, 1085, 1225, 1262
BseSI GKGCMC 1 cut(s) 1174
BseYI CCCAGC 1 cut(s) 22
BshFI GGCC 3 cut(s) 535, 671, 1019
BshNI GGYRCC 1 cut(s) 654
BshTI ACCGGT 1 cut(s) 449
BsiSI CCGG 3 cut(s) 108, 450, 1020
BslFI GGGAC 3 cut(s) 40, 125, 367
BslI CCNNNNNNNGG 2 cut(s) 651, 1223
BsmAI GTCTC 1 cut(s) 1004
BsmFI GGGAC 3 cut(s) 40, 125, 367
BsnI GGCC 3 cut(s) 535, 671, 1019
Bso31I GGTCTC 1 cut(s) 1004
Bsp1286I GDGCHC 1 cut(s) 1174
Bsp143I GATC 3 cut(s) 454, 844, 1058
Bsp19I CCATGG 1 cut(s) 666
BspANI GGCC 3 cut(s) 535, 671, 1019
BspCNI CTCAG 3 cut(s) 591, 644, 937
BspLI GGNNCC 1 cut(s) 656
BspPI GGATC 1 cut(s) 1066
BspQI GCTCTTC 1 cut(s) 1194
BspT107I GGYRCC 1 cut(s) 654
BspTI CTTAAG 1 cut(s) 1106
BspTNI GGTCTC 1 cut(s) 1004
BsrDI GCAATG 3 cut(s) 330, 892, 927
BsrFI RCCGGY 2 cut(s) 449, 1019
BsrI ACTGG 5 cut(s) 159, 686, 1085, 1225, 1262
BssAI RCCGGY 2 cut(s) 449, 1019
BssECI CCNNGG 2 cut(s) 108, 666
BssMI GATC 3 cut(s) 454, 844, 1058
BssNI GRCGYC 1 cut(s) 655
BssT1I CCWWGG 1 cut(s) 666
Bst2UI CCWGG 3 cut(s) 66, 729, 886
Bst4CI ACNGT 2 cut(s) 31, 233
Bst6I CTCTTC 3 cut(s) 153, 1133, 1194
BstACI GRCGYC 1 cut(s) 655
BstAFI CTTAAG 1 cut(s) 1106
BstAPI GCANNNNNTGC 1 cut(s) 263
BstC8I GCNNGC 2 cut(s) 205, 369
BstDEI CTNAG 4 cut(s) 530, 599, 631, 945
BstDSI CCRYGG 1 cut(s) 666
BstF5I GGATG 4 cut(s) 742, 932, 1056, 1090
BstH2I RGCGCY 1 cut(s) 658
BstHHI GCGC 2 cut(s) 367, 657
BstKTI GATC 3 cut(s) 457, 847, 1061
BstMAI GTCTC 1 cut(s) 1004
BstMBI GATC 3 cut(s) 454, 844, 1058
BstMWI GCNNNNNNNGC 3 cut(s) 263, 373, 641
BstNI CCWGG 3 cut(s) 66, 729, 886
BstSCI CCNGG 4 cut(s) 64, 107, 727, 884
BstSLI GKGCMC 1 cut(s) 1174
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 3 cut(s) 535, 671, 1019
BtgI CCRYGG 1 cut(s) 666
BtsCI GGATG 4 cut(s) 742, 932, 1056, 1090
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 3 cut(s) 238, 904, 996
Cac8I GCNNGC 2 cut(s) 205, 369
CfoI GCGC 2 cut(s) 367, 657
Cfr10I RCCGGY 2 cut(s) 449, 1019
Cfr13I GGNCC 1 cut(s) 725
Csp6I GTAC 1 cut(s) 1088
CspAI ACCGGT 1 cut(s) 449
CviAII CATG 7 cut(s) 251, 510, 649, 667, 760, 858, 1183
CviQI GTAC 1 cut(s) 1088
DdeI CTNAG 4 cut(s) 530, 599, 631, 945
DinI GGCGCC 1 cut(s) 656
DpnI GATC 3 cut(s) 456, 846, 1060
DpnII GATC 3 cut(s) 454, 844, 1058
EaeI YGGCCR 1 cut(s) 669
Eam1104I CTCTTC 3 cut(s) 153, 1133, 1194
EarI CTCTTC 3 cut(s) 153, 1133, 1194
Eco130I CCWWGG 1 cut(s) 666
Eco31I GGTCTC 1 cut(s) 1004
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 1 cut(s) 167
EcoRII CCWGG 3 cut(s) 64, 727, 884
EcoT14I CCWWGG 1 cut(s) 666
EgeI GGCGCC 1 cut(s) 656
EheI GGCGCC 1 cut(s) 656
ErhI CCWWGG 1 cut(s) 666
FaeI CATG 7 cut(s) 254, 513, 652, 670, 763, 861, 1186
FalI AAGNNNNNCTT 8 cut(s) 80, 112, 246, 278, 1136, 1168, 1188, 1220
FaqI GGGAC 3 cut(s) 40, 125, 367
FatI CATG 7 cut(s) 250, 509, 648, 666, 759, 857, 1182
FbaI TGATCA 1 cut(s) 844
FokI GGATG 4 cut(s) 749, 919, 1063, 1077
FspBI CTAG 4 cut(s) 348, 798, 1064, 1305
GlaI GCGC 2 cut(s) 366, 656
GsaI CCCAGC 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 657
HaeII RGCGCY 1 cut(s) 658
HaeIII GGCC 3 cut(s) 535, 671, 1019
HapII CCGG 3 cut(s) 108, 450, 1020
HhaI GCGC 2 cut(s) 367, 657
Hin1I GRCGYC 1 cut(s) 655
Hin1II CATG 7 cut(s) 254, 513, 652, 670, 763, 861, 1186
Hin6I GCGC 2 cut(s) 365, 655
HinP1I GCGC 2 cut(s) 365, 655
HinfI GANTC 6 cut(s) 113, 355, 629, 789, 921, 986
HpaII CCGG 3 cut(s) 108, 450, 1020
HphI GGTGA 6 cut(s) 311, 464, 474, 572, 784, 1206
Hpy166II GTNNAC 2 cut(s) 128, 229
Hpy188I TCNGA 4 cut(s) 600, 706, 946, 1257
Hpy188III TCNNGA 5 cut(s) 463, 766, 848, 936, 1094
Hpy8I GTNNAC 2 cut(s) 128, 229
HpyAV CCTTC 5 cut(s) 142, 277, 655, 1049, 1281
HpyCH4III ACNGT 2 cut(s) 31, 233
HpyCH4IV ACGT 3 cut(s) 468, 907, 1123
HpyCH4V TGCA 8 cut(s) 217, 335, 371, 751, 832, 897, 932, 962
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 373, 641
HpyF3I CTNAG 4 cut(s) 530, 599, 631, 945
HpySE526I ACGT 3 cut(s) 468, 907, 1123
Hsp92I GRCGYC 1 cut(s) 655
Hsp92II CATG 7 cut(s) 254, 513, 652, 670, 763, 861, 1186
HspAI GCGC 2 cut(s) 365, 655
KasI GGCGCC 1 cut(s) 654
Ksp22I TGATCA 1 cut(s) 844
Kzo9I GATC 3 cut(s) 454, 844, 1058
LguI GCTCTTC 1 cut(s) 1194
LmnI GCTCC 2 cut(s) 93, 247
LweI GCATC 2 cut(s) 631, 941
MaeI CTAG 4 cut(s) 348, 798, 1064, 1305
MaeII ACGT 3 cut(s) 468, 907, 1123
MaeIII GTNAC 3 cut(s) 480, 772, 899
MalI GATC 3 cut(s) 456, 846, 1060
MboI GATC 3 cut(s) 454, 844, 1058
MboII GAAGA 5 cut(s) 170, 1048, 1150, 1202, 1211
MfeI CAATTG 1 cut(s) 423
MhlI GDGCHC 1 cut(s) 1174
MlsI TGGCCA 1 cut(s) 671
MluNI TGGCCA 1 cut(s) 671
Mly113I GGCGCC 1 cut(s) 655
MlyI GAGTC 3 cut(s) 107, 349, 623
MmeI TCCRAC 1 cut(s) 766
MnlI CCTC 8 cut(s) 8, 192, 762, 1009, 1041, 1113, 1128, 1285
Mox20I TGGCCA 1 cut(s) 671
MroXI GAANNNNTTC 1 cut(s) 258
MscI TGGCCA 1 cut(s) 671
MseI TTAA 8 cut(s) 171, 189, 308, 443, 614, 1107, 1296, 1309
MslI CAYNNNNRTG 1 cut(s) 897
Msp20I TGGCCA 1 cut(s) 671
MspA1I CMGCKG 2 cut(s) 22, 635
MspCI CTTAAG 1 cut(s) 1106
MspI CCGG 3 cut(s) 108, 450, 1020
MspR9I CCNGG 4 cut(s) 66, 109, 729, 886
MunI CAATTG 1 cut(s) 423
MvaI CCWGG 3 cut(s) 66, 729, 886
MwoI GCNNNNNNNGC 3 cut(s) 263, 373, 641
NarI GGCGCC 1 cut(s) 655
NciI CCSGG 1 cut(s) 109
NcoI CCATGG 1 cut(s) 666
NdeII GATC 3 cut(s) 454, 844, 1058
NlaIII CATG 7 cut(s) 254, 513, 652, 670, 763, 861, 1186
NlaIV GGNNCC 1 cut(s) 656
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 3 cut(s) 480, 772, 899
PciSI GCTCTTC 1 cut(s) 1194
PdmI GAANNNNTTC 1 cut(s) 258
PfeI GAWTC 3 cut(s) 789, 921, 986
PflMI CCANNNNNTGG 1 cut(s) 1223
PfoI TCCNGGA 1 cut(s) 884
PinAI ACCGGT 1 cut(s) 449
PleI GAGTC 3 cut(s) 107, 349, 623
PluTI GGCGCC 1 cut(s) 658
PpsI GAGTC 3 cut(s) 107, 349, 623
PsiI TTATAA 1 cut(s) 396
Psp1406I AACGTT 1 cut(s) 1123
Psp6I CCWGG 3 cut(s) 64, 727, 884
PspFI CCCAGC 1 cut(s) 22
PspGI CCWGG 3 cut(s) 64, 727, 884
PspN4I GGNNCC 1 cut(s) 656
PspPI GGNCC 1 cut(s) 725
PvuII CAGCTG 2 cut(s) 22, 635
RsaI GTAC 1 cut(s) 1089
RsaNI GTAC 1 cut(s) 1088
RseI CAYNNNNRTG 1 cut(s) 897
SapI GCTCTTC 1 cut(s) 1194
SaqAI TTAA 8 cut(s) 171, 189, 308, 443, 614, 1107, 1296, 1309
Sau3AI GATC 3 cut(s) 454, 844, 1058
Sau96I GGNCC 1 cut(s) 725
SchI GAGTC 3 cut(s) 107, 349, 623
ScrFI CCNGG 4 cut(s) 66, 109, 729, 886
SduI GDGCHC 1 cut(s) 1174
SfaNI GCATC 2 cut(s) 631, 941
SfoI GGCGCC 1 cut(s) 656
SinI GGWCC 1 cut(s) 725
SmiMI CAYNNNNRTG 1 cut(s) 897
SmlI CTYRAG 3 cut(s) 476, 766, 1106
SmoI CTYRAG 3 cut(s) 476, 766, 1106
SpeI ACTAGT 1 cut(s) 1063
SspDI GGCGCC 1 cut(s) 654
SspI AATATT 1 cut(s) 540
SspMI CTAG 4 cut(s) 348, 798, 1064, 1305
StyD4I CCNGG 4 cut(s) 64, 107, 727, 884
StyI CCWWGG 1 cut(s) 666
TaaI ACNGT 2 cut(s) 31, 233
TaiI ACGT 3 cut(s) 471, 910, 1126
TaqI TCGA 4 cut(s) 294, 358, 577, 820
TatI WGTACW 1 cut(s) 1087
TfiI GAWTC 3 cut(s) 789, 921, 986
Tru1I TTAA 8 cut(s) 171, 189, 308, 443, 614, 1107, 1296, 1309
Tru9I TTAA 8 cut(s) 171, 189, 308, 443, 614, 1107, 1296, 1309
TscAI CASTG 3 cut(s) 238, 904, 996
TseFI GTSAC 3 cut(s) 480, 772, 899
Tsp45I GTSAC 3 cut(s) 480, 772, 899
TspDTI ATGAA 4 cut(s) 267, 329, 637, 999
TspRI CASTG 3 cut(s) 238, 904, 996
Van91I CCANNNNNTGG 1 cut(s) 1223
Vha464I CTTAAG 1 cut(s) 1106
VpaK11BI GGWCC 1 cut(s) 725
XapI RAATTY 3 cut(s) 610, 685, 1114
XmnI GAANNNNTTC 1 cut(s) 258
XspI CTAG 4 cut(s) 348, 798, 1064, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.