Rh5AG260200

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000264
Physical Location & Seq
Forward (+)
33958122 .. 33963001
4880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG260200.1

Sequence Viewer

Length: 1656 bp
ATGATTGAAGAGAAAGAAATGGTCATGGTTTCACCAACTGGTGGAGACCCATTCCGCAAAAATGCCTATTTTCTCAAACCCATTCTCCCTGATTCCTCCAATTATGAACCTCCTTTCAATCTCCCTCACTGTTTTTCCTCCCTCGCACCCCGTTTTGACCCAAAAAAGCTAGAGCTTCAAGTCCTTGGATGGCGTTTCGACCACCAAGATTTGCAGAGTTGGTTTCTCCACTTGGCTTCTAAGCACCAATCTACATGGAAGAAAGCTGGTGTCTTTGAAGCCATCTTCAATTCCACGTACCAAATCAAAAGGAAAAAGGATTTGGTTTGTGGGTTTGCAGAGAAATGGTGTTGTGAGACCAACACCTTCATCTTTCCATGGGGTGAAGCAACTATCACTTTGGAGGATGTTATGGTTTTGGGAGGCTTTTCGGTTTTGGGAGACTCCATTTTAAGTCCTATTGAAAGCAGAGAACTGAAAGAAATAGAAGACAAACTTGAGGTAGAGCGAATGGGACTTTACAACAAAAAGGCTGGAAGAGCTCCTGTTGCTAACACATACCTATGGACGAAGAAGTTCATGAAGAGTGGGAGCGAATTAGAGCACGAAGCATTCCTTGTGTTCTGGCTGTCCAGGTATGTTTTCCATAATTCTCTCAATGCAGTCAATAAGGCTGTTTTCTCCATTGCAATTCGTCTAGCTAGAGGGATTCCAGTTGCGCTTGCACCGGCTATTCTTTCTCACATTTATAGAGATTTGGGTCTACTCAAAAGGACAATTGCATCTTCAGATGAATTAAATGCCAAGAATGCTTTTGTAAAACTCATAATCAAGTCACAGTTTCAATTAGTTCAGATTTGGGCTTGGGAACGATTTCTGGAACTTAGGCCAAAGCCCAAAGTTATATGCTATGGTGAGCCGAGATTGGCTCGATGGGATAAAGTAGACTGTCTGAATGTTGGAGATATGAGGAGGGTTTTAGACTCAGCAGGTGAAGGTTTCATGTGGCGCCCTTATGCCATGGCCGTTAAGAACTGGAATTTTCCTAAATACTATGTTGAAAAGGAAGAGTGGGTTTTGGTTGGTGCAGGCTTGGATGATGAACTATTGTCATTTGCCATGTGCTTGAGGGTGGCTGAGTTAGTTGGATTTGATACTATACAGCACTACCTTCCACATAGAGTAGCTCGGCAATTTGGATTTGATCAAGACCTTCCGTGTTCTGTTCCTGGACATAGCCAAAATTATGACAACCCGAAATTGTATATTCCCTCCAGGCTTTCTGAGGCAGATGTTAGCATTAGATACTTAAATTGGTGGAAGGAATCAGTTTCAGGCCTCGAACAGAGACATATGCCATCGAAAAAGAAAGTTAAGAAATCTGTAGACTTGATAAATGATGCCACCATTCCTTGTATTTGTTCTCCAAAGAATTCAGAAGAACTTGTGCAGGTTTCTGCAGGAAGGAATGAGGCCACTTTGACACCATCTTTGATTGCATCCGCACGAGCAGACTTATATAGTCCCCACCAATATGAGTATCTAGCAGTTACACACGGCTCAAAAAACCGTCCTGGAAGAAAGAAACAAACATCGGTAGTGTCCGAGTTACCATCCAACCCTGAGCATGCAGCAGGATCCCCAGGAAGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

551

Amino Acids

62.8

Weight (kDa)

8.77

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 90 - 441 5.8e-103 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 980
Acc36I ACCTGC 2 cut(s) 980, 1441
AccB1I GGYRCC 1 cut(s) 1008
AccB7I CCANNNNNTGG 1 cut(s) 41
AccI GTMKAC 3 cut(s) 763, 945, 1386
AciI CCGC 2 cut(s) 55, 1503
AclWI GGATC 2 cut(s) 1632, 1645
AcoI YGGCCR 1 cut(s) 1023
AcsI RAATTY 2 cut(s) 1039, 1432
AcuI CTGAAG 1 cut(s) 771
AcyI GRCGYC 1 cut(s) 1009
AfaI GTAC 1 cut(s) 299
AfiI CCNNNNNNNGG 2 cut(s) 41, 1647
AgsI TTSAA 8 cut(s) 8, 118, 179, 278, 289, 464, 845, 1061
AjnI CCWGG 5 cut(s) 632, 1228, 1274, 1573, 1642
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
AluBI AGCT 6 cut(s) 169, 175, 266, 542, 701, 1187
AluI AGCT 6 cut(s) 169, 175, 266, 542, 701, 1187
Alw21I GWGCWC 2 cut(s) 544, 606
Alw26I GTCTC 4 cut(s) 39, 350, 435, 1342
AlwI GGATC 2 cut(s) 1632, 1645
AoxI GGCC 4 cut(s) 887, 1023, 1336, 1473
ApeKI GCWGC 1 cut(s) 1631
ApoI RAATTY 2 cut(s) 1039, 1432
ArsI GACNNNNNNTTYG 2 cut(s) 1474, 1506
Asp700I GAANNNNTTC 2 cut(s) 575, 873
AspLEI GCGC 2 cut(s) 721, 1011
AsuHPI GGTGA 4 cut(s) 24, 395, 926, 1004
BamHI GGATCC 1 cut(s) 1637
BanI GGYRCC 1 cut(s) 1008
BanII GRGCYC 1 cut(s) 544
BauI CACGAG 1 cut(s) 1506
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 2 cut(s) 544, 606
BbvI GCAGC 1 cut(s) 1643
BccI CCATC 6 cut(s) 183, 290, 927, 1366, 1495, 1621
BceAI ACGGC 2 cut(s) 1010, 1573
BciT130I CCWGG 5 cut(s) 634, 1230, 1276, 1575, 1644
BclI TGATCA 1 cut(s) 1204
BcoDI GTCTC 4 cut(s) 39, 350, 435, 1342
BfaI CTAG 4 cut(s) 170, 698, 702, 1544
BfmI CTRYAG 2 cut(s) 1383, 1458
BfoI RGCGCY 1 cut(s) 1012
BfuAI ACCTGC 2 cut(s) 980, 1441
BisI GCNGC 1 cut(s) 1632
BlsI GCNGC 1 cut(s) 1633
Bme1390I CCNGG 5 cut(s) 634, 1230, 1276, 1575, 1644
BmiI GGNNCC 2 cut(s) 1010, 1639
BmrFI CCNGG 5 cut(s) 634, 1230, 1276, 1575, 1644
BmsI GCATC 3 cut(s) 791, 1390, 1508
BpiI GAAGAC 1 cut(s) 495
BplI GAGNNNNNCTC 2 cut(s) 913, 945
BpmI CTGGAG 1 cut(s) 1258
Bpu10I CCTNAGC 1 cut(s) 1623
BpuEI CTTGAG 2 cut(s) 518, 1147
BsaAI YACGTR 1 cut(s) 297
BsaHI GRCGYC 1 cut(s) 1009
BsaI GGTCTC 2 cut(s) 39, 350
BsaJI CCNNGG 4 cut(s) 184, 377, 1020, 1642
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 1647
Bse118I RCCGGY 1 cut(s) 727
Bse1I ACTGG 3 cut(s) 43, 713, 1040
Bse3DI GCAATG 1 cut(s) 684
BseBI CCWGG 5 cut(s) 634, 1230, 1276, 1575, 1644
BseDI CCNNGG 4 cut(s) 184, 377, 1020, 1642
BseGI GGATG 5 cut(s) 194, 412, 1102, 1499, 1613
BseLI CCNNNNNNNGG 2 cut(s) 41, 1647
BseMI GCAATG 1 cut(s) 684
BseMII CTCAG 4 cut(s) 999, 1128, 1275, 1614
BseNI ACTGG 3 cut(s) 43, 713, 1040
BseRI GAGGAG 1 cut(s) 985
BseXI GCAGC 1 cut(s) 1643
BsgI GTGCAG 2 cut(s) 1107, 1469
BshFI GGCC 4 cut(s) 889, 1025, 1338, 1475
BshNI GGYRCC 1 cut(s) 1008
BsiHKAI GWGCWC 2 cut(s) 544, 606
BsiSI CCGG 1 cut(s) 728
BslFI GGGAC 2 cut(s) 528, 1509
BslI CCNNNNNNNGG 2 cut(s) 41, 1647
BsmAI GTCTC 4 cut(s) 39, 350, 435, 1342
BsmFI GGGAC 2 cut(s) 528, 1509
BsmI GAATGC 2 cut(s) 611, 814
BsnI GGCC 4 cut(s) 889, 1025, 1338, 1475
Bso31I GGTCTC 2 cut(s) 39, 350
Bsp1286I GDGCHC 2 cut(s) 544, 606
Bsp143I GATC 2 cut(s) 1204, 1637
Bsp19I CCATGG 2 cut(s) 377, 1020
BspACI CCGC 2 cut(s) 55, 1503
BspANI GGCC 4 cut(s) 889, 1025, 1338, 1475
BspCNI CTCAG 4 cut(s) 998, 1129, 1276, 1615
BspHI TCATGA 1 cut(s) 579
BspLI GGNNCC 2 cut(s) 1010, 1639
BspMAI CTGCAG 1 cut(s) 1462
BspMI ACCTGC 2 cut(s) 980, 1441
BspPI GGATC 2 cut(s) 1632, 1645
BspQI GCTCTTC 1 cut(s) 532
BspT107I GGYRCC 1 cut(s) 1008
BspTNI GGTCTC 2 cut(s) 39, 350
BsrDI GCAATG 1 cut(s) 684
BsrFI RCCGGY 1 cut(s) 727
BsrI ACTGG 3 cut(s) 43, 713, 1040
BssAI RCCGGY 1 cut(s) 727
BssECI CCNNGG 4 cut(s) 184, 377, 1020, 1642
BssMI GATC 2 cut(s) 1204, 1637
BssNI GRCGYC 1 cut(s) 1009
BssSI CACGAG 1 cut(s) 1506
BssT1I CCWWGG 3 cut(s) 184, 377, 1020
Bst2BI CACGAG 1 cut(s) 1506
Bst2UI CCWGG 5 cut(s) 634, 1230, 1276, 1575, 1644
Bst4CI ACNGT 4 cut(s) 131, 840, 950, 1571
Bst6I CTCTTC 4 cut(s) 3, 532, 578, 1062
BstACI GRCGYC 1 cut(s) 1009
BstBAI YACGTR 1 cut(s) 297
BstC8I GCNNGC 3 cut(s) 723, 1090, 1629
BstDEI CTNAG 6 cut(s) 240, 884, 985, 1137, 1284, 1623
BstDSI CCRYGG 2 cut(s) 377, 1020
BstF5I GGATG 5 cut(s) 194, 412, 1102, 1499, 1613
BstH2I RGCGCY 1 cut(s) 1012
BstHHI GCGC 2 cut(s) 721, 1011
BstKTI GATC 2 cut(s) 1207, 1640
BstMAI GTCTC 4 cut(s) 39, 350, 435, 1342
BstMBI GATC 2 cut(s) 1204, 1637
BstMWI GCNNNNNNNGC 3 cut(s) 539, 548, 809
BstNI CCWGG 5 cut(s) 634, 1230, 1276, 1575, 1644
BstNSI RCATGY 1 cut(s) 1631
BstSCI CCNGG 5 cut(s) 632, 1228, 1274, 1573, 1642
BstSFI CTRYAG 2 cut(s) 1383, 1458
BstV1I GCAGC 1 cut(s) 1643
BstV2I GAAGAC 1 cut(s) 495
BstX2I RGATCY 1 cut(s) 1637
BstYI RGATCY 1 cut(s) 1637
BsuRI GGCC 4 cut(s) 889, 1025, 1338, 1475
BtgI CCRYGG 2 cut(s) 377, 1020
BtsCI GGATG 5 cut(s) 194, 412, 1102, 1499, 1613
BtsIMutI CAGTG 1 cut(s) 127
BveI ACCTGC 2 cut(s) 980, 1441
Cac8I GCNNGC 3 cut(s) 723, 1090, 1629
CciI TCATGA 1 cut(s) 579
CfoI GCGC 2 cut(s) 721, 1011
Cfr10I RCCGGY 1 cut(s) 727
Csp6I GTAC 1 cut(s) 298
CviAII CATG 8 cut(s) 25, 255, 378, 580, 1003, 1021, 1120, 1628
CviQI GTAC 1 cut(s) 298
DdeI CTNAG 6 cut(s) 240, 884, 985, 1137, 1284, 1623
DinI GGCGCC 1 cut(s) 1010
DpnI GATC 2 cut(s) 1206, 1639
DpnII GATC 2 cut(s) 1204, 1637
EaeI YGGCCR 1 cut(s) 1023
Eam1104I CTCTTC 4 cut(s) 3, 532, 578, 1062
EarI CTCTTC 4 cut(s) 3, 532, 578, 1062
Ecl136II GAGCTC 1 cut(s) 542
Eco130I CCWWGG 3 cut(s) 184, 377, 1020
Eco147I AGGCCT 1 cut(s) 1338
Eco24I GRGCYC 1 cut(s) 544
Eco31I GGTCTC 2 cut(s) 39, 350
Eco53kI GAGCTC 1 cut(s) 542
Eco57I CTGAAG 1 cut(s) 771
EcoICRI GAGCTC 1 cut(s) 542
EcoRI GAATTC 1 cut(s) 1432
EcoRII CCWGG 5 cut(s) 632, 1228, 1274, 1573, 1642
EcoT14I CCWWGG 3 cut(s) 184, 377, 1020
EcoT38I GRGCYC 1 cut(s) 544
EgeI GGCGCC 1 cut(s) 1010
EheI GGCGCC 1 cut(s) 1010
ErhI CCWWGG 3 cut(s) 184, 377, 1020
FaeI CATG 8 cut(s) 28, 258, 381, 583, 1006, 1024, 1123, 1631
FalI AAGNNNNNCTT 4 cut(s) 480, 512, 600, 632
FaqI GGGAC 2 cut(s) 528, 1509
FatI CATG 8 cut(s) 24, 254, 377, 579, 1002, 1020, 1119, 1627
FauNDI CATATG 1 cut(s) 1353
FbaI TGATCA 1 cut(s) 1204
FblI GTMKAC 3 cut(s) 763, 945, 1386
Fnu4HI GCNGC 1 cut(s) 1632
FokI GGATG 5 cut(s) 201, 419, 1109, 1486, 1600
FriOI GRGCYC 1 cut(s) 544
Fsp4HI GCNGC 1 cut(s) 1632
FspBI CTAG 4 cut(s) 170, 698, 702, 1544
GlaI GCGC 2 cut(s) 720, 1010
GluI GCNGC 1 cut(s) 1632
GsuI CTGGAG 1 cut(s) 1258
HaeII RGCGCY 1 cut(s) 1012
HaeIII GGCC 4 cut(s) 889, 1025, 1338, 1475
HapII CCGG 1 cut(s) 728
HhaI GCGC 2 cut(s) 721, 1011
Hin1I GRCGYC 1 cut(s) 1009
Hin1II CATG 8 cut(s) 28, 258, 381, 583, 1006, 1024, 1123, 1631
Hin6I GCGC 2 cut(s) 719, 1009
HinP1I GCGC 2 cut(s) 719, 1009
HinfI GANTC 5 cut(s) 92, 443, 709, 983, 1325
HpaII CCGG 1 cut(s) 728
HphI GGTGA 4 cut(s) 24, 395, 926, 1004
Hpy166II GTNNAC 3 cut(s) 764, 946, 1387
Hpy188I TCNGA 6 cut(s) 790, 855, 954, 1285, 1438, 1606
Hpy188III TCNNGA 4 cut(s) 580, 878, 1208, 1653
Hpy8I GTNNAC 3 cut(s) 764, 946, 1387
HpyAV CCTTC 7 cut(s) 376, 989, 1181, 1223, 1315, 1458, 1641
HpyCH4III ACNGT 4 cut(s) 131, 840, 950, 1571
HpyCH4IV ACGT 1 cut(s) 296
HpyF10VI GCNNNNNNNGC 3 cut(s) 539, 548, 809
HpyF3I CTNAG 6 cut(s) 240, 884, 985, 1137, 1284, 1623
HpySE526I ACGT 1 cut(s) 296
Hsp92I GRCGYC 1 cut(s) 1009
Hsp92II CATG 8 cut(s) 28, 258, 381, 583, 1006, 1024, 1123, 1631
HspAI GCGC 2 cut(s) 719, 1009
KasI GGCGCC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 1204
Kzo9I GATC 2 cut(s) 1204, 1637
LguI GCTCTTC 1 cut(s) 532
LmnI GCTCC 2 cut(s) 547, 591
Lsp1109I GCAGC 1 cut(s) 1643
LweI GCATC 3 cut(s) 791, 1390, 1508
MaeI CTAG 4 cut(s) 170, 698, 702, 1544
MaeII ACGT 1 cut(s) 296
MaeIII GTNAC 3 cut(s) 834, 1549, 1608
MalI GATC 2 cut(s) 1206, 1639
MboI GATC 2 cut(s) 1204, 1637
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 1 cut(s) 1637
MhlI GDGCHC 2 cut(s) 544, 606
Mly113I GGCGCC 1 cut(s) 1009
MlyI GAGTC 2 cut(s) 437, 977
MmeI TCCRAC 3 cut(s) 940, 1126, 1641
MroXI GAANNNNTTC 2 cut(s) 575, 873
MseI TTAA 5 cut(s) 452, 797, 1029, 1310, 1374
MslI CAYNNNNRTG 2 cut(s) 562, 1533
MspI CCGG 1 cut(s) 728
MspR9I CCNGG 5 cut(s) 634, 1230, 1276, 1575, 1644
MunI CAATTG 1 cut(s) 777
Mva1269I GAATGC 2 cut(s) 611, 814
MvaI CCWGG 5 cut(s) 634, 1230, 1276, 1575, 1644
MwoI GCNNNNNNNGC 3 cut(s) 539, 548, 809
NarI GGCGCC 1 cut(s) 1009
NcoI CCATGG 2 cut(s) 377, 1020
NdeI CATATG 1 cut(s) 1353
NdeII GATC 2 cut(s) 1204, 1637
NlaIII CATG 8 cut(s) 28, 258, 381, 583, 1006, 1024, 1123, 1631
NlaIV GGNNCC 2 cut(s) 1010, 1639
NmeAIII GCCGAG 2 cut(s) 945, 1168
NmuCI GTSAC 1 cut(s) 834
NspI RCATGY 1 cut(s) 1631
PaeI GCATGC 1 cut(s) 1631
PagI TCATGA 1 cut(s) 579
PaqCI CACCTGC 1 cut(s) 980
PceI AGGCCT 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 532
PctI GAATGC 2 cut(s) 611, 814
PdmI GAANNNNTTC 2 cut(s) 575, 873
PfeI GAWTC 3 cut(s) 92, 709, 1325
PflMI CCANNNNNTGG 1 cut(s) 41
PfoI TCCNGGA 2 cut(s) 1228, 1573
PkrI GCNGC 1 cut(s) 1633
PleI GAGTC 2 cut(s) 437, 977
PluTI GGCGCC 1 cut(s) 1012
PpsI GAGTC 2 cut(s) 437, 977
Ppu21I YACGTR 1 cut(s) 297
Psp124BI GAGCTC 1 cut(s) 544
Psp6I CCWGG 5 cut(s) 632, 1228, 1274, 1573, 1642
PspGI CCWGG 5 cut(s) 632, 1228, 1274, 1573, 1642
PspN4I GGNNCC 2 cut(s) 1010, 1639
PstI CTGCAG 1 cut(s) 1462
PsuI RGATCY 1 cut(s) 1637
RsaI GTAC 1 cut(s) 299
RsaNI GTAC 1 cut(s) 298
RseI CAYNNNNRTG 2 cut(s) 562, 1533
SacI GAGCTC 1 cut(s) 544
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 5 cut(s) 452, 797, 1029, 1310, 1374
SatI GCNGC 1 cut(s) 1632
Sau3AI GATC 2 cut(s) 1204, 1637
SchI GAGTC 2 cut(s) 437, 977
ScrFI CCNGG 5 cut(s) 634, 1230, 1276, 1575, 1644
SduI GDGCHC 2 cut(s) 544, 606
SfaNI GCATC 3 cut(s) 791, 1390, 1508
SfcI CTRYAG 2 cut(s) 1383, 1458
SfoI GGCGCC 1 cut(s) 1010
SmiMI CAYNNNNRTG 2 cut(s) 562, 1533
SmlI CTYRAG 2 cut(s) 497, 1126
SmoI CTYRAG 2 cut(s) 497, 1126
SphI GCATGC 1 cut(s) 1631
SseBI AGGCCT 1 cut(s) 1338
SsiI CCGC 2 cut(s) 55, 1503
SspDI GGCGCC 1 cut(s) 1008
SspMI CTAG 4 cut(s) 170, 698, 702, 1544
SstI GAGCTC 1 cut(s) 544
StuI AGGCCT 1 cut(s) 1338
StyD4I CCNGG 5 cut(s) 632, 1228, 1274, 1573, 1642
StyI CCWWGG 3 cut(s) 184, 377, 1020
TaaI ACNGT 4 cut(s) 131, 840, 950, 1571
TaiI ACGT 1 cut(s) 299
TaqI TCGA 4 cut(s) 198, 931, 1341, 1361
TfiI GAWTC 3 cut(s) 92, 709, 1325
Tru1I TTAA 5 cut(s) 452, 797, 1029, 1310, 1374
Tru9I TTAA 5 cut(s) 452, 797, 1029, 1310, 1374
TscAI CASTG 1 cut(s) 134
TseFI GTSAC 1 cut(s) 834
TseI GCWGC 1 cut(s) 1631
Tsp45I GTSAC 1 cut(s) 834
TspDTI ATGAA 7 cut(s) 120, 358, 568, 596, 807, 991, 1116
TspGWI ACGGA 1 cut(s) 1206
TspRI CASTG 1 cut(s) 134
Van91I CCANNNNNTGG 1 cut(s) 41
XapI RAATTY 2 cut(s) 1039, 1432
XceI RCATGY 1 cut(s) 1631
XmiI GTMKAC 3 cut(s) 763, 945, 1386
XmnI GAANNNNTTC 2 cut(s) 575, 873
XspI CTAG 4 cut(s) 170, 698, 702, 1544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.