Rh5CG298200

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000264
Physical Location & Seq
Forward (+)
32831601 .. 32833780
2180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG298200.1

Sequence Viewer

Length: 1758 bp
ATGGAGAGTCCAGCGGACGCCATTATTGAAGAAAGAGATGTCATGGTTTCACCAAATGATGGAGACCCATCTCTGAAAAAAGCCTACTTTCTGAAACCCACTGCCCCTATTTCCTCCATTGATCTTGAACCTCCTTTTGAGCTCCCTCAGTGTTTCTCTTCCCTCCCACCAAAAGAATGGCATTTGAAGGTCAGTTTCCGTGGATGGCGTCTCGAACAAAACGACTGGAGAACTTGGGTCGATCACATGGCTTCTCTCCACCAATCTACCTGGAAGAGAGCTGTTATTCATGAAGCCGTCATCAATTCGACTTTTGAAATCAAAAGGAAAACCAACTTGGTATATGGTCTTTCAGAGAAATGGTGTTGTGAGACCAACACTTTCGTTTTCCCTTGGGGTGAAGCTAGCATCACGTTGGAGGATATCATGATTTTGGGAGGCTTTTCGGTTTTGGGAGACTCTGTTTTCAGTTCACTTGATAGCAGCATTGAACTGAAAAAAATACAAGAGAAGCTTGAGAAAGAGCGTAGTGAACTTTACAAGAGTACATCCAAGAATGCTACTGAAAGCTTATGGTTGAAGAAGTTCAGGAAGAGTGGGAGTGAATTGGAGCACCAAGCATTCCTTGCCTTTTGGTTGTCCAGGTATGTTTTTCCTGAGGCTTGTAATGTAATACACAAACGTGTATTTCCCATTGCAATTCTTTTAGCTAGAGGTACCCGAATTGCACTTGCACCGGCTGTTCTTGCCTGCATTTATAGAGATTTGAGTGTGCTGAAAAGGGCTATTGTAGCTTCAAATGAATTAAAGGGTAGGAATGATGTTTCAAAACTCAAACTCAAGTCACCATTTCATTTAGTACAGGTTTGGGCATGGGAAAGATTTCTGGAATTTAGGCCAGTACCTAATGTTATTAGTTATGCTGAGCCAAGATTGGCCCTATGGAACAGGGTAGATGGTCTAAAAGTTGTAAATGTGAGGACAGTTTTAGAATCAGCCGGAGAATCTTTCGTGTGGCGCCCTTATGCCATGCCAATTGAGAACTGGAACTTCCCTAAATTCTATGCGGAGAAGGAAAAATGGGTTGGCCCGGGTCTGGAGGATGAATTATTGTCATTTGTCATGTGCTTGAGGGTGACTGAGTTAGCTGGATTGGATACTAGAGAGCAATACCTTCCGCATCGTGTGGCAAGGCAATTTGGATATGATCAAGACTTTCCATCTTCTGTTGCTCGGTCTGGTCACAGTTCTGATGAACCATGTGTAGAAGTAAATTCTGATGGATCCCGGAAAGATTGCATTGACGAAATGAAGAAGGTGAAATTGTATATTCCATCCAGGATGTCAAAGGCAGATATAATTAGCACAAGATACTTGAAGTGGTGGAAGGAATCCGTGTCAGTTCTCAAAAACAAAAGCGAGCCTACTATGCCAAAATTAAAGAAAGCAAAGTGCATGGAAGGATCACTTCCGAGAGCTAAACATGTCCCCATACATCATGGTTCTGCCCCAAAGAAAGTTGTAGAGGGTTCTAAGAGAGGTAGGAAGACTAATGGTTTCACCATTCCTTCAGTTTCTTATTCGAAGTTTTCAGAAAAAATAGAGCTGCCTTCCGAACCAAGGAATCAAGGTACTGATTCCCTTGTTCCTCCAGGATTTCGTCCCAGATGTAGGATGGAAGATGGAGGTTCAATGGATGAAGATAGACTTAACTTTATCAGATATATTTGGATGTTATATGAATCACAAAAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

585

Amino Acids

67.14

Weight (kDa)

9.06

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 96 - 463 2.5e-104 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 2 cut(s) 716, 1017
AccB7I CCANNNNNTGG 1 cut(s) 59
AciI CCGC 3 cut(s) 14, 1067, 1178
AclWI GGATC 3 cut(s) 1278, 1291, 1471
AcsI RAATTY 3 cut(s) 890, 1058, 1273
AcuI CTGAAG 1 cut(s) 1554
AcyI GRCGYC 3 cut(s) 18, 208, 1018
AfaI GTAC 5 cut(s) 547, 718, 861, 903, 1633
AfiI CCNNNNNNNGG 4 cut(s) 59, 1096, 1620, 1671
AflIII ACRYGT 2 cut(s) 682, 1483
AjnI CCWGG 4 cut(s) 269, 641, 1337, 1651
AjuI GAANNNNNNNTTGG 4 cut(s) 320, 352, 1068, 1100
AleI CACNNNNGTG 1 cut(s) 681
Alw21I GWGCWC 2 cut(s) 144, 615
Alw26I GTCTC 4 cut(s) 57, 215, 365, 450
AlwI GGATC 3 cut(s) 1278, 1291, 1471
Ama87I CYCGRG 1 cut(s) 1090
AoxI GGCC 3 cut(s) 896, 936, 1087
ApeKI GCWGC 2 cut(s) 483, 1606
ApoI RAATTY 3 cut(s) 890, 1058, 1273
Asp700I GAANNNNTTC 2 cut(s) 584, 882
Asp718I GGTACC 1 cut(s) 716
AspLEI GCGC 1 cut(s) 1020
AspS9I GGNCC 2 cut(s) 937, 1088
AsuC2I CCSGG 3 cut(s) 1091, 1092, 1288
AsuHPI GGTGA 6 cut(s) 42, 410, 837, 1147, 1330, 1552
AsuII TTCGAA 1 cut(s) 1583
AsuNHI GCTAGC 1 cut(s) 404
AvaI CYCGRG 1 cut(s) 1090
AxyI CCTNAGG 1 cut(s) 657
BamHI GGATCC 1 cut(s) 1283
BanI GGYRCC 2 cut(s) 716, 1017
BanII GRGCYC 1 cut(s) 144
BbsI GAAGAC 1 cut(s) 1553
Bbv12I GWGCWC 2 cut(s) 144, 615
BbvI GCAGC 2 cut(s) 495, 1593
BccI CCATC 9 cut(s) 53, 76, 198, 950, 1228, 1274, 1342, 1669, 1676
BceAI ACGGC 1 cut(s) 281
BciT130I CCWGG 4 cut(s) 271, 643, 1339, 1653
BciVI GTATCC 1 cut(s) 1150
BclI TGATCA 1 cut(s) 1207
BcnI CCSGG 3 cut(s) 1091, 1092, 1288
BcoDI GTCTC 4 cut(s) 57, 215, 365, 450
BfaI CTAG 3 cut(s) 405, 711, 1161
BfoI RGCGCY 1 cut(s) 1021
BfuI GTATCC 1 cut(s) 1150
BisI GCNGC 2 cut(s) 484, 1607
BlpI GCTNAGC 1 cut(s) 924
BlsI GCNGC 2 cut(s) 485, 1608
Bme1390I CCNGG 7 cut(s) 271, 643, 1091, 1092, 1288, 1339, 1653
BmeT110I CYCGRG 1 cut(s) 1090
BmgT120I GGNCC 2 cut(s) 937, 1088
BmiI GGNNCC 3 cut(s) 718, 1019, 1285
BmrFI CCNGG 7 cut(s) 271, 643, 1091, 1092, 1288, 1339, 1653
BmsI GCATC 2 cut(s) 417, 1189
BmtI GCTAGC 1 cut(s) 408
BpiI GAAGAC 1 cut(s) 1553
BpmI CTGGAG 3 cut(s) 247, 1118, 1635
Bpu1102I GCTNAGC 1 cut(s) 924
Bpu14I TTCGAA 1 cut(s) 1583
BpuEI CTTGAG 3 cut(s) 536, 824, 1150
BpuMI CCSGG 3 cut(s) 1091, 1092, 1288
BsaHI GRCGYC 3 cut(s) 18, 208, 1018
BsaI GGTCTC 2 cut(s) 57, 365
BsaJI CCNNGG 4 cut(s) 199, 392, 1090, 1619
BsaXI ACNNNNNCTCC 2 cut(s) 447, 477
Bsc4I CCNNNNNNNGG 4 cut(s) 59, 1096, 1620, 1671
Bse118I RCCGGY 1 cut(s) 736
Bse1I ACTGG 3 cut(s) 230, 899, 1049
Bse21I CCTNAGG 1 cut(s) 657
Bse3DI GCAATG 1 cut(s) 693
BseBI CCWGG 4 cut(s) 271, 643, 1339, 1653
BseDI CCNNGG 4 cut(s) 199, 392, 1090, 1619
BseGI GGATG 8 cut(s) 209, 548, 1108, 1334, 1347, 1680, 1702, 1737
BseLI CCNNNNNNNGG 4 cut(s) 59, 1096, 1620, 1671
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 4 cut(s) 161, 648, 915, 1131
BseNI ACTGG 3 cut(s) 230, 899, 1049
BseXI GCAGC 2 cut(s) 495, 1593
BshFI GGCC 3 cut(s) 898, 938, 1089
BshNI GGYRCC 2 cut(s) 716, 1017
BsiHKAI GWGCWC 2 cut(s) 144, 615
BsiHKCI CYCGRG 1 cut(s) 1090
BsiSI CCGG 4 cut(s) 737, 999, 1091, 1288
BslFI GGGAC 2 cut(s) 1472, 1647
BslI CCNNNNNNNGG 4 cut(s) 59, 1096, 1620, 1671
BsmAI GTCTC 4 cut(s) 57, 215, 365, 450
BsmBI CGTCTC 1 cut(s) 215
BsmFI GGGAC 2 cut(s) 1472, 1647
BsmI GAATGC 2 cut(s) 562, 620
BsnI GGCC 3 cut(s) 898, 938, 1089
Bso31I GGTCTC 2 cut(s) 57, 365
BsoBI CYCGRG 1 cut(s) 1090
Bsp119I TTCGAA 1 cut(s) 1583
Bsp1286I GDGCHC 2 cut(s) 144, 615
Bsp143I GATC 5 cut(s) 121, 241, 1207, 1283, 1463
Bsp1720I GCTNAGC 1 cut(s) 924
BspACI CCGC 3 cut(s) 14, 1067, 1178
BspANI GGCC 3 cut(s) 898, 938, 1089
BspCNI CTCAG 4 cut(s) 160, 649, 916, 1132
BspHI TCATGA 2 cut(s) 289, 426
BspLI GGNNCC 3 cut(s) 718, 1019, 1285
BspOI GCTAGC 1 cut(s) 408
BspPI GGATC 3 cut(s) 1278, 1291, 1471
BspT104I TTCGAA 1 cut(s) 1583
BspT107I GGYRCC 2 cut(s) 716, 1017
BspTNI GGTCTC 2 cut(s) 57, 365
BsrDI GCAATG 1 cut(s) 693
BsrFI RCCGGY 1 cut(s) 736
BsrI ACTGG 3 cut(s) 230, 899, 1049
BssAI RCCGGY 1 cut(s) 736
BssECI CCNNGG 4 cut(s) 199, 392, 1090, 1619
BssMI GATC 5 cut(s) 121, 241, 1207, 1283, 1463
BssNI GRCGYC 3 cut(s) 18, 208, 1018
BssT1I CCWWGG 2 cut(s) 392, 1619
Bst2UI CCWGG 4 cut(s) 271, 643, 1339, 1653
Bst4CI ACNGT 2 cut(s) 985, 1247
Bst6I CTCTTC 3 cut(s) 163, 269, 587
BstACI GRCGYC 3 cut(s) 18, 208, 1018
BstAPI GCANNNNNTGC 1 cut(s) 626
BstBI TTCGAA 1 cut(s) 1583
BstC8I GCNNGC 3 cut(s) 406, 751, 1421
BstDEI CTNAG 5 cut(s) 147, 657, 924, 1140, 1533
BstDSI CCRYGG 1 cut(s) 199
BstF5I GGATG 8 cut(s) 209, 548, 1108, 1334, 1347, 1680, 1702, 1737
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 1 cut(s) 1020
BstKTI GATC 5 cut(s) 124, 244, 1210, 1286, 1466
BstMAI GTCTC 4 cut(s) 57, 215, 365, 450
BstMBI GATC 5 cut(s) 121, 241, 1207, 1283, 1463
BstMWI GCNNNNNNNGC 4 cut(s) 626, 746, 791, 1429
BstNI CCWGG 4 cut(s) 271, 643, 1339, 1653
BstNSI RCATGY 1 cut(s) 1487
BstSCI CCNGG 7 cut(s) 269, 641, 1089, 1090, 1286, 1337, 1651
BstV1I GCAGC 2 cut(s) 495, 1593
BstV2I GAAGAC 1 cut(s) 1553
BstX2I RGATCY 1 cut(s) 1283
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 1 cut(s) 1283
Bsu36I CCTNAGG 1 cut(s) 657
BsuI GTATCC 1 cut(s) 1150
BsuRI GGCC 3 cut(s) 898, 938, 1089
BtgI CCRYGG 1 cut(s) 199
BtsCI GGATG 8 cut(s) 209, 548, 1108, 1334, 1347, 1680, 1702, 1737
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 2 cut(s) 99, 155
Cac8I GCNNGC 3 cut(s) 406, 751, 1421
CciI TCATGA 2 cut(s) 289, 426
CfoI GCGC 1 cut(s) 1020
Cfr10I RCCGGY 1 cut(s) 736
Cfr13I GGNCC 2 cut(s) 937, 1088
Cfr9I CCCGGG 1 cut(s) 1090
CseI GACGC 2 cut(s) 26, 197
Csp6I GTAC 5 cut(s) 546, 717, 860, 902, 1632
CviQI GTAC 5 cut(s) 546, 717, 860, 902, 1632
DdeI CTNAG 5 cut(s) 147, 657, 924, 1140, 1533
DinI GGCGCC 1 cut(s) 1019
DpnI GATC 5 cut(s) 123, 243, 1209, 1285, 1465
DpnII GATC 5 cut(s) 121, 241, 1207, 1283, 1463
Eam1104I CTCTTC 3 cut(s) 163, 269, 587
EarI CTCTTC 3 cut(s) 163, 269, 587
Ecl136II GAGCTC 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 392, 1619
Eco24I GRGCYC 1 cut(s) 144
Eco31I GGTCTC 2 cut(s) 57, 365
Eco32I GATATC 1 cut(s) 424
Eco53kI GAGCTC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 1554
Eco81I CCTNAGG 1 cut(s) 657
Eco88I CYCGRG 1 cut(s) 1090
EcoICRI GAGCTC 1 cut(s) 142
EcoRII CCWGG 4 cut(s) 269, 641, 1337, 1651
EcoRV GATATC 1 cut(s) 424
EcoT14I CCWWGG 2 cut(s) 392, 1619
EcoT38I GRGCYC 1 cut(s) 144
EgeI GGCGCC 1 cut(s) 1019
EheI GGCGCC 1 cut(s) 1019
ErhI CCWWGG 2 cut(s) 392, 1619
Esp3I CGTCTC 1 cut(s) 215
FalI AAGNNNNNCTT 8 cut(s) 498, 530, 609, 641, 1452, 1484, 1692, 1724
FaqI GGGAC 2 cut(s) 1472, 1647
FbaI TGATCA 1 cut(s) 1207
Fnu4HI GCNGC 2 cut(s) 484, 1607
FokI GGATG 8 cut(s) 216, 535, 1115, 1321, 1354, 1687, 1709, 1744
FriOI GRGCYC 1 cut(s) 144
Fsp4HI GCNGC 2 cut(s) 484, 1607
FspBI CTAG 3 cut(s) 405, 711, 1161
GlaI GCGC 1 cut(s) 1019
GluI GCNGC 2 cut(s) 484, 1607
GsuI CTGGAG 3 cut(s) 247, 1118, 1635
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 3 cut(s) 898, 938, 1089
HapII CCGG 4 cut(s) 737, 999, 1091, 1288
HgaI GACGC 2 cut(s) 26, 197
HhaI GCGC 1 cut(s) 1020
Hin1I GRCGYC 3 cut(s) 18, 208, 1018
Hin6I GCGC 1 cut(s) 1018
HinP1I GCGC 1 cut(s) 1018
HindIII AAGCTT 2 cut(s) 512, 568
HinfI GANTC 8 cut(s) 7, 458, 992, 1004, 1391, 1624, 1637, 1742
HpaII CCGG 4 cut(s) 737, 999, 1091, 1288
HphI GGTGA 6 cut(s) 42, 410, 837, 1147, 1330, 1552
Hpy166II GTNNAC 2 cut(s) 473, 533
Hpy188I TCNGA 9 cut(s) 75, 93, 355, 1252, 1279, 1473, 1594, 1615, 1721
Hpy188III TCNNGA 9 cut(s) 125, 212, 290, 427, 589, 656, 887, 1097, 1211
Hpy8I GTNNAC 2 cut(s) 473, 533
HpyAV CCTTC 8 cut(s) 181, 1066, 1184, 1309, 1381, 1454, 1578, 1620
HpyCH4III ACNGT 2 cut(s) 985, 1247
HpyCH4IV ACGT 2 cut(s) 413, 682
HpyCH4V TGCA 6 cut(s) 698, 728, 734, 753, 1299, 1455
HpyF10VI GCNNNNNNNGC 4 cut(s) 626, 746, 791, 1429
HpyF3I CTNAG 5 cut(s) 147, 657, 924, 1140, 1533
HpySE526I ACGT 2 cut(s) 413, 682
Hsp92I GRCGYC 3 cut(s) 18, 208, 1018
HspAI GCGC 1 cut(s) 1018
KasI GGCGCC 1 cut(s) 1017
KpnI GGTACC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 1207
Kzo9I GATC 5 cut(s) 121, 241, 1207, 1283, 1463
LmnI GCTCC 2 cut(s) 147, 610
Lsp1109I GCAGC 2 cut(s) 495, 1593
LweI GCATC 2 cut(s) 417, 1189
MaeI CTAG 3 cut(s) 405, 711, 1161
MaeII ACGT 2 cut(s) 413, 682
MaeIII GTNAC 3 cut(s) 843, 1135, 1241
MalI GATC 5 cut(s) 123, 243, 1209, 1285, 1465
MboI GATC 5 cut(s) 121, 241, 1207, 1283, 1463
MfeI CAATTG 1 cut(s) 1035
MflI RGATCY 1 cut(s) 1283
MhlI GDGCHC 2 cut(s) 144, 615
Mly113I GGCGCC 1 cut(s) 1018
MlyI GAGTC 2 cut(s) 16, 452
MmeI TCCRAC 1 cut(s) 396
MroXI GAANNNNTTC 2 cut(s) 584, 882
MseI TTAA 3 cut(s) 806, 1439, 1710
MslI CAYNNNNRTG 1 cut(s) 681
MspA1I CMGCKG 1 cut(s) 14
MspI CCGG 4 cut(s) 737, 999, 1091, 1288
MspR9I CCNGG 7 cut(s) 271, 643, 1091, 1092, 1288, 1339, 1653
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 2 cut(s) 562, 620
MvaI CCWGG 4 cut(s) 271, 643, 1339, 1653
MwoI GCNNNNNNNGC 4 cut(s) 626, 746, 791, 1429
NarI GGCGCC 1 cut(s) 1018
NciI CCSGG 3 cut(s) 1091, 1092, 1288
NdeII GATC 5 cut(s) 121, 241, 1207, 1283, 1463
NheI GCTAGC 1 cut(s) 404
NlaIV GGNNCC 3 cut(s) 718, 1019, 1285
NmuCI GTSAC 3 cut(s) 843, 1135, 1241
NspI RCATGY 1 cut(s) 1487
NspV TTCGAA 1 cut(s) 1583
OliI CACNNNNGTG 1 cut(s) 681
PagI TCATGA 2 cut(s) 289, 426
PciI ACATGT 1 cut(s) 1483
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 2 cut(s) 562, 620
PdmI GAANNNNTTC 2 cut(s) 584, 882
PfeI GAWTC 6 cut(s) 992, 1004, 1391, 1624, 1637, 1742
PflMI CCANNNNNTGG 1 cut(s) 59
PfoI TCCNGGA 3 cut(s) 1286, 1337, 1651
PkrI GCNGC 2 cut(s) 485, 1608
PleI GAGTC 2 cut(s) 15, 452
PluTI GGCGCC 1 cut(s) 1021
PpsI GAGTC 2 cut(s) 15, 452
PscI ACATGT 1 cut(s) 1483
Psp124BI GAGCTC 1 cut(s) 144
Psp6I CCWGG 4 cut(s) 269, 641, 1337, 1651
PspGI CCWGG 4 cut(s) 269, 641, 1337, 1651
PspN4I GGNNCC 3 cut(s) 718, 1019, 1285
PspPI GGNCC 2 cut(s) 937, 1088
PsuI RGATCY 1 cut(s) 1283
RsaI GTAC 5 cut(s) 547, 718, 861, 903, 1633
RsaNI GTAC 5 cut(s) 546, 717, 860, 902, 1632
RseI CAYNNNNRTG 1 cut(s) 681
SacI GAGCTC 1 cut(s) 144
SaqAI TTAA 3 cut(s) 806, 1439, 1710
SatI GCNGC 2 cut(s) 484, 1607
Sau3AI GATC 5 cut(s) 121, 241, 1207, 1283, 1463
Sau96I GGNCC 2 cut(s) 937, 1088
SchI GAGTC 2 cut(s) 16, 452
ScrFI CCNGG 7 cut(s) 271, 643, 1091, 1092, 1288, 1339, 1653
SduI GDGCHC 2 cut(s) 144, 615
SfaNI GCATC 2 cut(s) 417, 1189
SfoI GGCGCC 1 cut(s) 1019
SfuI TTCGAA 1 cut(s) 1583
SmaI CCCGGG 1 cut(s) 1092
SmiMI CAYNNNNRTG 1 cut(s) 681
SmlI CTYRAG 3 cut(s) 515, 839, 1129
SmoI CTYRAG 3 cut(s) 515, 839, 1129
SsiI CCGC 3 cut(s) 14, 1067, 1178
SspDI GGCGCC 1 cut(s) 1017
SspMI CTAG 3 cut(s) 405, 711, 1161
SstI GAGCTC 1 cut(s) 144
StyD4I CCNGG 7 cut(s) 269, 641, 1089, 1090, 1286, 1337, 1651
StyI CCWWGG 2 cut(s) 392, 1619
TaaI ACNGT 2 cut(s) 985, 1247
TaiI ACGT 2 cut(s) 416, 685
TaqI TCGA 4 cut(s) 213, 240, 308, 1583
TaqII GACCGA 1 cut(s) 1224
TatI WGTACW 2 cut(s) 545, 859
TfiI GAWTC 6 cut(s) 992, 1004, 1391, 1624, 1637, 1742
Tru1I TTAA 3 cut(s) 806, 1439, 1710
Tru9I TTAA 3 cut(s) 806, 1439, 1710
TscAI CASTG 2 cut(s) 106, 155
TseFI GTSAC 3 cut(s) 843, 1135, 1241
TseI GCWGC 2 cut(s) 483, 1606
Tsp45I GTSAC 3 cut(s) 843, 1135, 1241
TspDTI ATGAA 9 cut(s) 278, 306, 816, 842, 1119, 1269, 1325, 1713, 1755
TspGWI ACGGA 2 cut(s) 188, 1384
TspMI CCCGGG 1 cut(s) 1090
TspRI CASTG 2 cut(s) 106, 155
Van91I CCANNNNNTGG 1 cut(s) 59
XapI RAATTY 3 cut(s) 890, 1058, 1273
XceI RCATGY 1 cut(s) 1487
XcmI CCANNNNNNNNNTGG 3 cut(s) 174, 1041, 1672
XmaI CCCGGG 1 cut(s) 1090
XmnI GAANNNNTTC 2 cut(s) 584, 882
XspI CTAG 3 cut(s) 405, 711, 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.