Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 20 - 190 | 3.6e-33 | Plant mobile domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 143 |
| AarI | CACCTGC | 1 cut(s) | 218 |
| Acc36I | ACCTGC | 3 cut(s) | 218, 706, 1038 |
| AccB1I | GGYRCC | 1 cut(s) | 246 |
| AciI | CCGC | 1 cut(s) | 1044 |
| AcoI | YGGCCR | 1 cut(s) | 261 |
| AcsI | RAATTY | 1 cut(s) | 697 |
| AcuI | CTGAAG | 2 cut(s) | 1007, 1014 |
| AcyI | GRCGYC | 1 cut(s) | 247 |
| AfaI | GTAC | 4 cut(s) | 400, 512, 946, 984 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 636 |
| AflIII | ACRYGT | 1 cut(s) | 776 |
| AgsI | TTSAA | 6 cut(s) | 27, 37, 299, 869, 914, 930 |
| AjnI | CCWGG | 1 cut(s) | 521 |
| AluBI | AGCT | 4 cut(s) | 23, 561, 758, 998 |
| AluI | AGCT | 4 cut(s) | 23, 561, 758, 998 |
| Alw21I | GWGCWC | 1 cut(s) | 1067 |
| Alw26I | GTCTC | 1 cut(s) | 527 |
| Alw44I | GTGCAC | 1 cut(s) | 1063 |
| Ama87I | CYCGRG | 1 cut(s) | 587 |
| AoxI | GGCC | 2 cut(s) | 125, 261 |
| ApaLI | GTGCAC | 1 cut(s) | 1063 |
| ApeKI | GCWGC | 2 cut(s) | 794, 1041 |
| ApoI | RAATTY | 1 cut(s) | 697 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 982, 1014 |
| AspLEI | GCGC | 2 cut(s) | 249, 820 |
| AspS9I | GGNCC | 2 cut(s) | 323, 639 |
| AsuHPI | GGTGA | 4 cut(s) | 66, 242, 661, 896 |
| AvaI | CYCGRG | 1 cut(s) | 587 |
| AvaII | GGWCC | 2 cut(s) | 323, 639 |
| BaeGI | GKGCMC | 1 cut(s) | 1067 |
| BalI | TGGCCA | 1 cut(s) | 263 |
| BanI | GGYRCC | 1 cut(s) | 246 |
| BbsI | GAAGAC | 1 cut(s) | 995 |
| Bbv12I | GWGCWC | 1 cut(s) | 1067 |
| BbvI | GCAGC | 2 cut(s) | 781, 1053 |
| BccI | CCATC | 2 cut(s) | 165, 526 |
| BceAI | ACGGC | 1 cut(s) | 614 |
| BciT130I | CCWGG | 1 cut(s) | 523 |
| BcoDI | GTCTC | 1 cut(s) | 527 |
| BfaI | CTAG | 6 cut(s) | 42, 402, 432, 543, 761, 1081 |
| BfmI | CTRYAG | 1 cut(s) | 795 |
| BfoI | RGCGCY | 1 cut(s) | 250 |
| BfuAI | ACCTGC | 3 cut(s) | 218, 706, 1038 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1016 |
| BisI | GCNGC | 2 cut(s) | 795, 1042 |
| BlpI | GCTNAGC | 1 cut(s) | 153 |
| BlsI | GCNGC | 2 cut(s) | 796, 1043 |
| Bme1390I | CCNGG | 1 cut(s) | 523 |
| Bme18I | GGWCC | 2 cut(s) | 323, 639 |
| BmeT110I | CYCGRG | 1 cut(s) | 587 |
| BmgT120I | GGNCC | 2 cut(s) | 323, 639 |
| BmiI | GGNNCC | 3 cut(s) | 248, 640, 1009 |
| BmrFI | CCNGG | 1 cut(s) | 523 |
| BmsI | GCATC | 2 cut(s) | 49, 805 |
| BpiI | GAAGAC | 1 cut(s) | 995 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 153 |
| BpuEI | CTTGAG | 1 cut(s) | 577 |
| BsaHI | GRCGYC | 1 cut(s) | 247 |
| BsaJI | CCNNGG | 2 cut(s) | 258, 873 |
| BsaWI | WCCGGW | 1 cut(s) | 1004 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 636 |
| Bse1I | ACTGG | 1 cut(s) | 952 |
| BseBI | CCWGG | 1 cut(s) | 523 |
| BseDI | CCNNGG | 2 cut(s) | 258, 873 |
| BseGI | GGATG | 3 cut(s) | 340, 518, 814 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 636 |
| BseMII | CTCAG | 3 cut(s) | 144, 372, 522 |
| BseNI | ACTGG | 1 cut(s) | 952 |
| BseRI | GAGGAG | 1 cut(s) | 223 |
| BseSI | GKGCMC | 1 cut(s) | 1067 |
| BseXI | GCAGC | 2 cut(s) | 781, 1053 |
| BsgI | GTGCAG | 1 cut(s) | 734 |
| BshFI | GGCC | 2 cut(s) | 127, 263 |
| BshNI | GGYRCC | 1 cut(s) | 246 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1067 |
| BsiHKCI | CYCGRG | 1 cut(s) | 587 |
| BsiSI | CCGG | 1 cut(s) | 1005 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 636 |
| BsmAI | GTCTC | 1 cut(s) | 527 |
| BsmI | GAATGC | 3 cut(s) | 43, 505, 796 |
| BsnI | GGCC | 2 cut(s) | 127, 263 |
| BsoBI | CYCGRG | 1 cut(s) | 587 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1067 |
| Bsp143I | GATC | 1 cut(s) | 346 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 153 |
| Bsp19I | CCATGG | 1 cut(s) | 258 |
| BspACI | CCGC | 1 cut(s) | 1044 |
| BspANI | GGCC | 2 cut(s) | 127, 263 |
| BspCNI | CTCAG | 3 cut(s) | 145, 373, 523 |
| BspLI | GGNNCC | 3 cut(s) | 248, 640, 1009 |
| BspMAI | CTGCAG | 1 cut(s) | 799 |
| BspMI | ACCTGC | 3 cut(s) | 218, 706, 1038 |
| BspT107I | GGYRCC | 1 cut(s) | 246 |
| BsrI | ACTGG | 1 cut(s) | 952 |
| BssECI | CCNNGG | 2 cut(s) | 258, 873 |
| BssMI | GATC | 1 cut(s) | 346 |
| BssNI | GRCGYC | 1 cut(s) | 247 |
| BssT1I | CCWWGG | 2 cut(s) | 258, 873 |
| Bst2UI | CCWGG | 1 cut(s) | 523 |
| Bst4CI | ACNGT | 4 cut(s) | 275, 491, 865, 890 |
| Bst6I | CTCTTC | 1 cut(s) | 590 |
| BstACI | GRCGYC | 1 cut(s) | 247 |
| BstDEI | CTNAG | 6 cut(s) | 122, 153, 381, 531, 1014, 1020 |
| BstDSI | CCRYGG | 1 cut(s) | 258 |
| BstEII | GGTNACC | 1 cut(s) | 667 |
| BstF5I | GGATG | 3 cut(s) | 340, 518, 814 |
| BstH2I | RGCGCY | 1 cut(s) | 250 |
| BstHHI | GCGC | 2 cut(s) | 249, 820 |
| BstKTI | GATC | 1 cut(s) | 349 |
| BstMAI | GTCTC | 1 cut(s) | 527 |
| BstMBI | GATC | 1 cut(s) | 346 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1016 |
| BstNI | CCWGG | 1 cut(s) | 523 |
| BstNSI | RCATGY | 1 cut(s) | 780 |
| BstPI | GGTNACC | 1 cut(s) | 667 |
| BstSCI | CCNGG | 1 cut(s) | 521 |
| BstSFI | CTRYAG | 1 cut(s) | 795 |
| BstSLI | GKGCMC | 1 cut(s) | 1067 |
| BstV1I | GCAGC | 2 cut(s) | 781, 1053 |
| BstV2I | GAAGAC | 1 cut(s) | 995 |
| BsuRI | GGCC | 2 cut(s) | 127, 263 |
| BtgI | CCRYGG | 1 cut(s) | 258 |
| BtsCI | GGATG | 3 cut(s) | 340, 518, 814 |
| BtsIMutI | CAGTG | 1 cut(s) | 605 |
| BveI | ACCTGC | 3 cut(s) | 218, 706, 1038 |
| CfoI | GCGC | 2 cut(s) | 249, 820 |
| Cfr13I | GGNCC | 2 cut(s) | 323, 639 |
| Csp6I | GTAC | 4 cut(s) | 399, 511, 945, 983 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 862, 897 |
| CviAII | CATG | 8 cut(s) | 70, 102, 259, 364, 462, 547, 777, 1076 |
| CviQI | GTAC | 4 cut(s) | 399, 511, 945, 983 |
| DdeI | CTNAG | 6 cut(s) | 122, 153, 381, 531, 1014, 1020 |
| DinI | GGCGCC | 1 cut(s) | 248 |
| DpnI | GATC | 1 cut(s) | 348 |
| DpnII | GATC | 1 cut(s) | 346 |
| EaeI | YGGCCR | 1 cut(s) | 261 |
| Eam1104I | CTCTTC | 1 cut(s) | 590 |
| EarI | CTCTTC | 1 cut(s) | 590 |
| Eco130I | CCWWGG | 2 cut(s) | 258, 873 |
| Eco147I | AGGCCT | 1 cut(s) | 127 |
| Eco47I | GGWCC | 2 cut(s) | 323, 639 |
| Eco57I | CTGAAG | 2 cut(s) | 1007, 1014 |
| Eco88I | CYCGRG | 1 cut(s) | 587 |
| Eco91I | GGTNACC | 1 cut(s) | 667 |
| EcoO65I | GGTNACC | 1 cut(s) | 667 |
| EcoRI | GAATTC | 1 cut(s) | 697 |
| EcoRII | CCWGG | 1 cut(s) | 521 |
| EcoT14I | CCWWGG | 2 cut(s) | 258, 873 |
| EgeI | GGCGCC | 1 cut(s) | 248 |
| EheI | GGCGCC | 1 cut(s) | 248 |
| ErhI | CCWWGG | 2 cut(s) | 258, 873 |
| FaeI | CATG | 8 cut(s) | 73, 105, 262, 367, 465, 550, 780, 1079 |
| FatI | CATG | 8 cut(s) | 69, 101, 258, 363, 461, 546, 776, 1075 |
| Fnu4HI | GCNGC | 2 cut(s) | 795, 1042 |
| FokI | GGATG | 3 cut(s) | 347, 505, 821 |
| Fsp4HI | GCNGC | 2 cut(s) | 795, 1042 |
| FspBI | CTAG | 6 cut(s) | 42, 402, 432, 543, 761, 1081 |
| GlaI | GCGC | 2 cut(s) | 248, 819 |
| GluI | GCNGC | 2 cut(s) | 795, 1042 |
| HaeII | RGCGCY | 1 cut(s) | 250 |
| HaeIII | GGCC | 2 cut(s) | 127, 263 |
| HapII | CCGG | 1 cut(s) | 1005 |
| HhaI | GCGC | 2 cut(s) | 249, 820 |
| Hin1I | GRCGYC | 1 cut(s) | 247 |
| Hin1II | CATG | 8 cut(s) | 73, 105, 262, 367, 465, 550, 780, 1079 |
| Hin6I | GCGC | 2 cut(s) | 247, 818 |
| HinP1I | GCGC | 2 cut(s) | 247, 818 |
| HindIII | AAGCTT | 1 cut(s) | 996 |
| HinfI | GANTC | 2 cut(s) | 572, 578 |
| HpaII | CCGG | 1 cut(s) | 1005 |
| HphI | GGTGA | 4 cut(s) | 66, 242, 661, 896 |
| Hpy166II | GTNNAC | 1 cut(s) | 1065 |
| Hpy188I | TCNGA | 7 cut(s) | 192, 532, 577, 703, 832, 840, 967 |
| Hpy188III | TCNNGA | 2 cut(s) | 452, 914 |
| Hpy8I | GTNNAC | 1 cut(s) | 1065 |
| HpyAV | CCTTC | 3 cut(s) | 227, 467, 723 |
| HpyCH4III | ACNGT | 4 cut(s) | 275, 491, 865, 890 |
| HpyCH4IV | ACGT | 2 cut(s) | 343, 513 |
| HpyCH4V | TGCA | 5 cut(s) | 287, 503, 715, 797, 1065 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1016 |
| HpyF3I | CTNAG | 6 cut(s) | 122, 153, 381, 531, 1014, 1020 |
| HpySE526I | ACGT | 2 cut(s) | 343, 513 |
| Hsp92I | GRCGYC | 1 cut(s) | 247 |
| Hsp92II | CATG | 8 cut(s) | 73, 105, 262, 367, 465, 550, 780, 1079 |
| HspAI | GCGC | 2 cut(s) | 247, 818 |
| KasI | GGCGCC | 1 cut(s) | 246 |
| Kzo9I | GATC | 1 cut(s) | 346 |
| LmnI | GCTCC | 2 cut(s) | 210, 1007 |
| Lsp1109I | GCAGC | 2 cut(s) | 781, 1053 |
| LweI | GCATC | 2 cut(s) | 49, 805 |
| MaeI | CTAG | 6 cut(s) | 42, 402, 432, 543, 761, 1081 |
| MaeII | ACGT | 2 cut(s) | 343, 513 |
| MaeIII | GTNAC | 5 cut(s) | 72, 579, 667, 884, 1025 |
| MalI | GATC | 1 cut(s) | 348 |
| MboI | GATC | 1 cut(s) | 346 |
| MboII | GAAGA | 4 cut(s) | 459, 607, 824, 1000 |
| MfeI | CAATTG | 1 cut(s) | 15 |
| MhlI | GDGCHC | 1 cut(s) | 1067 |
| MlsI | TGGCCA | 1 cut(s) | 263 |
| MluCI | AATT | 5 cut(s) | 15, 51, 437, 697, 896 |
| MluNI | TGGCCA | 1 cut(s) | 263 |
| Mly113I | GGCGCC | 1 cut(s) | 247 |
| MlyI | GAGTC | 1 cut(s) | 587 |
| MmeI | TCCRAC | 2 cut(s) | 178, 370 |
| Mox20I | TGGCCA | 1 cut(s) | 263 |
| MscI | TGGCCA | 1 cut(s) | 263 |
| MseI | TTAA | 3 cut(s) | 267, 447, 663 |
| MslI | CAYNNNNRTG | 1 cut(s) | 68 |
| Msp20I | TGGCCA | 1 cut(s) | 263 |
| MspA1I | CMGCKG | 1 cut(s) | 1044 |
| MspI | CCGG | 1 cut(s) | 1005 |
| MspR9I | CCNGG | 1 cut(s) | 523 |
| MunI | CAATTG | 1 cut(s) | 15 |
| Mva1269I | GAATGC | 3 cut(s) | 43, 505, 796 |
| MvaI | CCWGG | 1 cut(s) | 523 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1016 |
| NarI | GGCGCC | 1 cut(s) | 247 |
| NcoI | CCATGG | 1 cut(s) | 258 |
| NdeII | GATC | 1 cut(s) | 346 |
| NlaIII | CATG | 8 cut(s) | 73, 105, 262, 367, 465, 550, 780, 1079 |
| NlaIV | GGNNCC | 3 cut(s) | 248, 640, 1009 |
| NmuCI | GTSAC | 5 cut(s) | 72, 579, 667, 884, 1025 |
| NspI | RCATGY | 1 cut(s) | 780 |
| PaeR7I | CTCGAG | 1 cut(s) | 587 |
| PaqCI | CACCTGC | 1 cut(s) | 218 |
| PceI | AGGCCT | 1 cut(s) | 127 |
| PciI | ACATGT | 1 cut(s) | 776 |
| PctI | GAATGC | 3 cut(s) | 43, 505, 796 |
| PfeI | GAWTC | 1 cut(s) | 572 |
| PkrI | GCNGC | 2 cut(s) | 796, 1043 |
| PleI | GAGTC | 1 cut(s) | 586 |
| PluTI | GGCGCC | 1 cut(s) | 250 |
| PpsI | GAGTC | 1 cut(s) | 586 |
| PscI | ACATGT | 1 cut(s) | 776 |
| PsiI | TTATAA | 1 cut(s) | 143 |
| Psp6I | CCWGG | 1 cut(s) | 521 |
| PspEI | GGTNACC | 1 cut(s) | 667 |
| PspGI | CCWGG | 1 cut(s) | 521 |
| PspN4I | GGNNCC | 3 cut(s) | 248, 640, 1009 |
| PspPI | GGNCC | 2 cut(s) | 323, 639 |
| PspXI | VCTCGAGB | 1 cut(s) | 587 |
| PstI | CTGCAG | 1 cut(s) | 799 |
| RsaI | GTAC | 4 cut(s) | 400, 512, 946, 984 |
| RsaNI | GTAC | 4 cut(s) | 399, 511, 945, 983 |
| RseI | CAYNNNNRTG | 1 cut(s) | 68 |
| SaqAI | TTAA | 3 cut(s) | 267, 447, 663 |
| SatI | GCNGC | 2 cut(s) | 795, 1042 |
| Sau3AI | GATC | 1 cut(s) | 346 |
| Sau96I | GGNCC | 2 cut(s) | 323, 639 |
| SchI | GAGTC | 1 cut(s) | 587 |
| ScrFI | CCNGG | 1 cut(s) | 523 |
| SduI | GDGCHC | 1 cut(s) | 1067 |
| SfaNI | GCATC | 2 cut(s) | 49, 805 |
| SfcI | CTRYAG | 1 cut(s) | 795 |
| SfoI | GGCGCC | 1 cut(s) | 248 |
| Sfr274I | CTCGAG | 1 cut(s) | 587 |
| SinI | GGWCC | 2 cut(s) | 323, 639 |
| SlaI | CTCGAG | 1 cut(s) | 587 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 68 |
| SmlI | CTYRAG | 2 cut(s) | 556, 587 |
| SmoI | CTYRAG | 2 cut(s) | 556, 587 |
| Sse9I | AATT | 5 cut(s) | 15, 51, 437, 697, 896 |
| SseBI | AGGCCT | 1 cut(s) | 127 |
| SsiI | CCGC | 1 cut(s) | 1044 |
| SspDI | GGCGCC | 1 cut(s) | 246 |
| SspMI | CTAG | 6 cut(s) | 42, 402, 432, 543, 761, 1081 |
| StuI | AGGCCT | 1 cut(s) | 127 |
| StyD4I | CCNGG | 1 cut(s) | 521 |
| StyI | CCWWGG | 2 cut(s) | 258, 873 |
| TaaI | ACNGT | 4 cut(s) | 275, 491, 865, 890 |
| TaiI | ACGT | 2 cut(s) | 346, 516 |
| TaqI | TCGA | 3 cut(s) | 169, 424, 588 |
| TasI | AATT | 5 cut(s) | 15, 51, 437, 697, 896 |
| TfiI | GAWTC | 1 cut(s) | 572 |
| Tru1I | TTAA | 3 cut(s) | 267, 447, 663 |
| Tru9I | TTAA | 3 cut(s) | 267, 447, 663 |
| TscAI | CASTG | 1 cut(s) | 612 |
| TseFI | GTSAC | 5 cut(s) | 72, 579, 667, 884, 1025 |
| TseI | GCWGC | 2 cut(s) | 794, 1041 |
| Tsp45I | GTSAC | 5 cut(s) | 72, 579, 667, 884, 1025 |
| TspDTI | ATGAA | 7 cut(s) | 63, 71, 229, 354, 798, 803, 825 |
| TspRI | CASTG | 1 cut(s) | 612 |
| VneI | GTGCAC | 1 cut(s) | 1063 |
| VpaK11BI | GGWCC | 2 cut(s) | 323, 639 |
| XapI | RAATTY | 1 cut(s) | 697 |
| XceI | RCATGY | 1 cut(s) | 780 |
| XhoI | CTCGAG | 1 cut(s) | 587 |
| XspI | CTAG | 6 cut(s) | 42, 402, 432, 543, 761, 1081 |