Rroxscaffold_1G00042400

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000264
Physical Location & Seq
Reverse (-)
60493791 .. 60495710
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042400.1

Sequence Viewer

Length: 1563 bp
ATGCAGGACAGAACCACAGACACCATGATTGAAGTGCAAGAAGATGTGGCCATGGTTTCACCAACTGGAGGAGACCCATTTCGGAAAAGTGCCTACTTTCTCAAACCCATTGTTGCTTCCTCCATTGATGAACCTCCTCCTGAGCTTTCCCAGTGTTTTACCTCCCTCTCATCAGGTTTTGAGCCCAAGAAATTGGTTCTTGAAATCCGTGGATGGCGTCTGGACCACAAAGATTTGAAGACTTGGGTGGAGCACTTGGCTTTAACTCACCAAGGTACATGGAGGAGAGCTGGAATCAATGATGCCATCTTCAACTCCATGTGCGAAATCCGAAAGAAGAATGATTTGGTTCGTGGGCTTGGTGAGAAATGGTGCTGTGACACCAACACGTTCATTTTTGATTGGGGTGAAGCAACTATTTCTTTGGAAGATGTGATGGTGTTGGGAGGGTTTTCTGTTTTGGGAGACTCTGTTTTCAGTCCTCTTGAGAGCAGAGAACTGAGAGAAGTGGAGGATAGACTTGAGGAAGTGCGGAAGGGATTTCAAAATAAAAGAGGTGGTCAGGGCTGGGGAGTTGCCTACACTGATTTGTGGATGAAGGAATTCATGAAAGGTGGGAGTGATTTGGAGCATGAGGCATTTCTTGTGTTCTGGTTGTCTAGGTATGTTTTTCATGATGCTCGTAATTCAGTGAACAAGGCTGTGTTTTCCATTGCAATTCGTTTAGCTAGAGGGACTCGGATTGCGCTTGCGCCTGCTGTTCTTGCAAACATTTATAGAGATTTGGGTATGTTGAAGGGGAGTATTGCAGCTTCGAATGAGTTGAAATTGACGATCAAGTCGCCATTCCATTTGGTTCAGGTTTGGGCTTGGGAGAGATTTCTGGAACTTCGGCCAAGGCCAAATGGTATCAGAAATGCTGAGCCGAGATTGGCTCGATGGGATAAAGTACTTGGTCTAAATGTTGGAAACTTGAGGAGCGTTTTGGATTCGGCGGGAGAAGGTTTCTTGTGGCGCCCTTATGCCATTGCCATTGAGAATTGGAAACTTCCCAAGTATTTTCTGGAGAAGGAGAAGTGGGTGGTGGTTGGTCCCAGTTTGAATGATGATGAATTGCTGTCATTTTCGATATGCCTGAGGGTGAATGAGTTGGTTGGATTTGGCACTAAACAGCAGTACCTTCCACACCGAGTGGCTATGCAATTTGGTTATGATCAGGAAATCCCAGGTTTTGTTGCTCCATTGATTCACAATACCAATATGACCTGGAAGCAGTACTTGAAAGAACTTGAGTATGTGATATTGTATATACCGTCGAGGCTTTCTGAGGCGGATGCTAGCACAAGATACTTAAAGTGGTGGAAGGAATCCATGGCAGGCCTCAAACACAGAAGTATGTCACCAGAAAAGAAAGCAAGGGAAGCTGTCAATGAGATATATGATGTCAGCATTCCTTGTATCCGTTCTCCAAAGAAGGCAGAAGTACTCGTGCAGGTTTCTGCAGGAAGGAATGTATACGATGTAAGATCAAATATGGACATAACACATATCATCATAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

520

Amino Acids

59.51

Weight (kDa)

8.34

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 98 - 455 1.1e-105 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 838
Acc36I ACCTGC 1 cut(s) 1483
AccB1I GGYRCC 1 cut(s) 1014
AccI GTMKAC 1 cut(s) 1515
AciI CCGC 3 cut(s) 532, 995, 1331
AcoI YGGCCR 2 cut(s) 48, 893
AcsI RAATTY 1 cut(s) 602
AcyI GRCGYC 2 cut(s) 217, 1015
AdeI CACNNNGTG 1 cut(s) 1192
AfaI GTAC 5 cut(s) 277, 951, 1178, 1277, 1485
AfiI CCNNNNNNNGG 1 cut(s) 68
AflIII ACRYGT 1 cut(s) 387
AgsI TTSAA 9 cut(s) 32, 203, 238, 313, 545, 796, 826, 1102, 1282
AjnI CCWGG 2 cut(s) 1225, 1265
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 5 cut(s) 145, 290, 728, 812, 1424
AluI AGCT 5 cut(s) 145, 290, 728, 812, 1424
Alw21I GWGCWC 1 cut(s) 255
Alw26I GTCTC 2 cut(s) 66, 459
AoxI GGCC 4 cut(s) 48, 893, 899, 1378
ApeKI GCWGC 1 cut(s) 809
ApoI RAATTY 1 cut(s) 602
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 3 cut(s) 748, 754, 1017
AspS9I GGNCC 2 cut(s) 223, 1091
AsuHPI GGTGA 6 cut(s) 51, 260, 374, 419, 1153, 1392
AsuII TTCGAA 1 cut(s) 815
AsuNHI GCTAGC 1 cut(s) 1337
AvaII GGWCC 2 cut(s) 223, 1091
AxyI CCTNAGG 1 cut(s) 1136
BaeI ACNNNNGTAYC 2 cut(s) 1160, 1193
BalI TGGCCA 1 cut(s) 50
BanI GGYRCC 1 cut(s) 1014
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BauI CACGAG 1 cut(s) 1487
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 1 cut(s) 255
BbvI GCAGC 1 cut(s) 821
BccI CCATC 4 cut(s) 207, 314, 430, 933
BciT130I CCWGG 2 cut(s) 1227, 1267
BciVI GTATCC 1 cut(s) 1469
BclI TGATCA 1 cut(s) 1213
BcoDI GTCTC 2 cut(s) 66, 459
BfaI CTAG 3 cut(s) 660, 729, 1338
BfmI CTRYAG 1 cut(s) 1500
BfoI RGCGCY 1 cut(s) 1018
BfuAI ACCTGC 1 cut(s) 1483
BfuI GTATCC 1 cut(s) 1469
BisI GCNGC 1 cut(s) 810
BlpI GCTNAGC 1 cut(s) 921
BlsI GCNGC 1 cut(s) 811
BmcAI AGTACT 3 cut(s) 951, 1277, 1485
Bme1390I CCNGG 2 cut(s) 1227, 1267
Bme18I GGWCC 2 cut(s) 223, 1091
BmgT120I GGNCC 2 cut(s) 223, 1091
BmiI GGNNCC 2 cut(s) 1016, 1093
BmrFI CCNGG 2 cut(s) 1227, 1267
BmrI ACTGGG 2 cut(s) 145, 1089
BmsI GCATC 3 cut(s) 292, 667, 1324
BmtI GCTAGC 1 cut(s) 1341
BmuI ACTGGG 2 cut(s) 145, 1089
BpiI GAAGAC 1 cut(s) 245
BplI GAGNNNNNCTC 2 cut(s) 919, 951
BpmI CTGGAG 2 cut(s) 87, 1085
Bpu10I CCTNAGC 1 cut(s) 141
Bpu1102I GCTNAGC 1 cut(s) 921
Bpu14I TTCGAA 1 cut(s) 815
BpuEI CTTGAG 4 cut(s) 506, 542, 994, 1310
BsaHI GRCGYC 2 cut(s) 217, 1015
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 3 cut(s) 70, 151, 1095
Bse21I CCTNAGG 1 cut(s) 1136
Bse3DI GCAATG 2 cut(s) 711, 1026
BseBI CCWGG 2 cut(s) 1227, 1267
BseDI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BseGI GGATG 3 cut(s) 218, 600, 1339
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMI GCAATG 2 cut(s) 711, 1026
BseMII CTCAG 5 cut(s) 132, 491, 912, 1127, 1317
BseNI ACTGG 3 cut(s) 70, 151, 1095
BseRI GAGGAG 4 cut(s) 84, 126, 298, 991
BseXI GCAGC 1 cut(s) 821
BseYI CCCAGC 1 cut(s) 567
BsgI GTGCAG 1 cut(s) 1511
BshFI GGCC 4 cut(s) 50, 895, 901, 1380
BshNI GGYRCC 1 cut(s) 1014
BsiHKAI GWGCWC 1 cut(s) 255
BslFI GGGAC 2 cut(s) 748, 1077
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 2 cut(s) 66, 459
BsmFI GGGAC 2 cut(s) 748, 1077
BsmI GAATGC 1 cut(s) 1449
BsnI GGCC 4 cut(s) 50, 895, 901, 1380
Bso31I GGTCTC 1 cut(s) 66
Bsp119I TTCGAA 1 cut(s) 815
Bsp1286I GDGCHC 2 cut(s) 186, 255
Bsp143I GATC 3 cut(s) 834, 1213, 1526
Bsp1720I GCTNAGC 1 cut(s) 921
Bsp19I CCATGG 2 cut(s) 51, 1371
BspACI CCGC 3 cut(s) 532, 995, 1331
BspANI GGCC 4 cut(s) 50, 895, 901, 1380
BspCNI CTCAG 5 cut(s) 133, 492, 913, 1128, 1318
BspHI TCATGA 2 cut(s) 606, 673
BspLI GGNNCC 2 cut(s) 1016, 1093
BspMAI CTGCAG 1 cut(s) 1504
BspMI ACCTGC 1 cut(s) 1483
BspOI GCTAGC 1 cut(s) 1341
BspT104I TTCGAA 1 cut(s) 815
BspT107I GGYRCC 1 cut(s) 1014
BspTNI GGTCTC 1 cut(s) 66
BsrDI GCAATG 2 cut(s) 711, 1026
BsrI ACTGG 3 cut(s) 70, 151, 1095
BssECI CCNNGG 6 cut(s) 51, 208, 271, 896, 1225, 1371
BssMI GATC 3 cut(s) 834, 1213, 1526
BssNAI GTATAC 1 cut(s) 1516
BssNI GRCGYC 2 cut(s) 217, 1015
BssSI CACGAG 1 cut(s) 1487
BssT1I CCWWGG 4 cut(s) 51, 271, 896, 1371
Bst1107I GTATAC 1 cut(s) 1516
Bst2BI CACGAG 1 cut(s) 1487
Bst2UI CCWGG 2 cut(s) 1227, 1267
Bst4CI ACNGT 1 cut(s) 1314
BstACI GRCGYC 2 cut(s) 217, 1015
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 4 cut(s) 750, 756, 1339, 1378
BstDEI CTNAG 5 cut(s) 141, 500, 921, 1136, 1326
BstDSI CCRYGG 3 cut(s) 51, 208, 1371
BstF5I GGATG 3 cut(s) 218, 600, 1339
BstH2I RGCGCY 1 cut(s) 1018
BstHHI GCGC 3 cut(s) 748, 754, 1017
BstKTI GATC 3 cut(s) 837, 1216, 1529
BstMAI GTCTC 2 cut(s) 66, 459
BstMBI GATC 3 cut(s) 834, 1213, 1526
BstMWI GCNNNNNNNGC 2 cut(s) 764, 1421
BstNI CCWGG 2 cut(s) 1227, 1267
BstSCI CCNGG 2 cut(s) 1225, 1265
BstSFI CTRYAG 1 cut(s) 1500
BstV1I GCAGC 1 cut(s) 821
BstV2I GAAGAC 1 cut(s) 245
BstXI CCANNNNNNTGG 1 cut(s) 193
BstZ17I GTATAC 1 cut(s) 1516
Bsu36I CCTNAGG 1 cut(s) 1136
BsuI GTATCC 1 cut(s) 1469
BsuRI GGCC 4 cut(s) 50, 895, 901, 1380
BtgI CCRYGG 3 cut(s) 51, 208, 1371
BtsCI GGATG 3 cut(s) 218, 600, 1339
BtsIMutI CAGTG 3 cut(s) 158, 582, 696
BveI ACCTGC 1 cut(s) 1483
Cac8I GCNNGC 4 cut(s) 750, 756, 1339, 1378
CciI TCATGA 2 cut(s) 606, 673
CfoI GCGC 3 cut(s) 748, 754, 1017
Cfr13I GGNCC 2 cut(s) 223, 1091
CseI GACGC 1 cut(s) 206
Csp6I GTAC 5 cut(s) 276, 950, 1177, 1276, 1484
CviAII CATG 8 cut(s) 25, 52, 279, 319, 607, 632, 674, 1372
CviQI GTAC 5 cut(s) 276, 950, 1177, 1276, 1484
DdeI CTNAG 5 cut(s) 141, 500, 921, 1136, 1326
DinI GGCGCC 1 cut(s) 1016
DpnI GATC 3 cut(s) 836, 1215, 1528
DpnII GATC 3 cut(s) 834, 1213, 1526
DraIII CACNNNGTG 1 cut(s) 1192
DrdI GACNNNNNNGTC 1 cut(s) 838
DseDI GACNNNNNNGTC 1 cut(s) 838
EaeI YGGCCR 2 cut(s) 48, 893
EciI GGCGGA 1 cut(s) 1346
Eco130I CCWWGG 4 cut(s) 51, 271, 896, 1371
Eco147I AGGCCT 1 cut(s) 1380
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 66
Eco47I GGWCC 2 cut(s) 223, 1091
Eco81I CCTNAGG 1 cut(s) 1136
EcoRI GAATTC 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 1225, 1265
EcoT14I CCWWGG 4 cut(s) 51, 271, 896, 1371
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 1016
EheI GGCGCC 1 cut(s) 1016
ErhI CCWWGG 4 cut(s) 51, 271, 896, 1371
FaeI CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1375
FalI AAGNNNNNCTT 2 cut(s) 1262, 1294
FaqI GGGAC 2 cut(s) 748, 1077
FatI CATG 8 cut(s) 24, 51, 278, 318, 606, 631, 673, 1371
FauI CCCGC 1 cut(s) 988
FbaI TGATCA 1 cut(s) 1213
FblI GTMKAC 1 cut(s) 1515
Fnu4HI GCNGC 1 cut(s) 810
FokI GGATG 3 cut(s) 225, 607, 1346
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 1 cut(s) 810
FspBI CTAG 3 cut(s) 660, 729, 1338
GlaI GCGC 3 cut(s) 747, 753, 1016
GluI GCNGC 1 cut(s) 810
GsaI CCCAGC 1 cut(s) 571
GsuI CTGGAG 2 cut(s) 87, 1085
HaeII RGCGCY 1 cut(s) 1018
HaeIII GGCC 4 cut(s) 50, 895, 901, 1380
HgaI GACGC 1 cut(s) 206
HhaI GCGC 3 cut(s) 748, 754, 1017
Hin1I GRCGYC 2 cut(s) 217, 1015
Hin1II CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1375
Hin6I GCGC 3 cut(s) 746, 752, 1015
HinP1I GCGC 3 cut(s) 746, 752, 1015
HinfI GANTC 6 cut(s) 294, 467, 736, 989, 1246, 1367
HphI GGTGA 6 cut(s) 51, 260, 374, 419, 1153, 1392
Hpy166II GTNNAC 2 cut(s) 694, 1516
Hpy188I TCNGA 5 cut(s) 84, 332, 741, 914, 1327
Hpy188III TCNNGA 9 cut(s) 140, 200, 221, 485, 607, 674, 884, 1064, 1217
Hpy8I GTNNAC 2 cut(s) 694, 1516
Hpy99I CGWCG 1 cut(s) 1318
HpyAV CCTTC 9 cut(s) 529, 592, 790, 995, 1063, 1190, 1357, 1468, 1500
HpyCH4III ACNGT 1 cut(s) 1314
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 8 cut(s) 4, 37, 716, 767, 809, 1201, 1492, 1502
HpyF10VI GCNNNNNNNGC 2 cut(s) 764, 1421
HpyF3I CTNAG 5 cut(s) 141, 500, 921, 1136, 1326
HpySE526I ACGT 1 cut(s) 389
Hsp92I GRCGYC 2 cut(s) 217, 1015
Hsp92II CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1375
HspAI GCGC 3 cut(s) 746, 752, 1015
KasI GGCGCC 1 cut(s) 1014
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 3 cut(s) 834, 1213, 1526
LmnI GCTCC 4 cut(s) 250, 628, 978, 1243
Lsp1109I GCAGC 1 cut(s) 821
LweI GCATC 3 cut(s) 292, 667, 1324
MaeI CTAG 3 cut(s) 660, 729, 1338
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 2 cut(s) 377, 1398
MalI GATC 3 cut(s) 836, 1215, 1528
MboI GATC 3 cut(s) 834, 1213, 1526
MboII GAAGA 5 cut(s) 53, 250, 301, 349, 440
MhlI GDGCHC 2 cut(s) 186, 255
MlsI TGGCCA 1 cut(s) 50
MluCI AATT 8 cut(s) 191, 602, 685, 717, 827, 1039, 1112, 1202
MluNI TGGCCA 1 cut(s) 50
Mly113I GGCGCC 1 cut(s) 1015
MlyI GAGTC 2 cut(s) 461, 730
MmeI TCCRAC 2 cut(s) 946, 1135
Mox20I TGGCCA 1 cut(s) 50
MroXI GAANNNNTTC 1 cut(s) 602
MscI TGGCCA 1 cut(s) 50
MseI TTAA 2 cut(s) 263, 1352
Msp20I TGGCCA 1 cut(s) 50
MspR9I CCNGG 2 cut(s) 1227, 1267
Mva1269I GAATGC 1 cut(s) 1449
MvaI CCWGG 2 cut(s) 1227, 1267
MwoI GCNNNNNNNGC 2 cut(s) 764, 1421
NarI GGCGCC 1 cut(s) 1015
NcoI CCATGG 2 cut(s) 51, 1371
NdeII GATC 3 cut(s) 834, 1213, 1526
NheI GCTAGC 1 cut(s) 1337
NlaIII CATG 8 cut(s) 28, 55, 282, 322, 610, 635, 677, 1375
NlaIV GGNNCC 2 cut(s) 1016, 1093
NmeAIII GCCGAG 1 cut(s) 951
NmuCI GTSAC 2 cut(s) 377, 1398
NspV TTCGAA 1 cut(s) 815
PagI TCATGA 2 cut(s) 606, 673
PceI AGGCCT 1 cut(s) 1380
PctI GAATGC 1 cut(s) 1449
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 4 cut(s) 294, 989, 1246, 1367
PkrI GCNGC 1 cut(s) 811
PleI GAGTC 2 cut(s) 461, 730
PluTI GGCGCC 1 cut(s) 1018
PpsI GAGTC 2 cut(s) 461, 730
Psp6I CCWGG 2 cut(s) 1225, 1265
PspFI CCCAGC 1 cut(s) 567
PspGI CCWGG 2 cut(s) 1225, 1265
PspN4I GGNNCC 2 cut(s) 1016, 1093
PspPI GGNCC 2 cut(s) 223, 1091
PstI CTGCAG 1 cut(s) 1504
RsaI GTAC 5 cut(s) 277, 951, 1178, 1277, 1485
RsaNI GTAC 5 cut(s) 276, 950, 1177, 1276, 1484
SaqAI TTAA 2 cut(s) 263, 1352
SatI GCNGC 1 cut(s) 810
Sau3AI GATC 3 cut(s) 834, 1213, 1526
Sau96I GGNCC 2 cut(s) 223, 1091
ScaI AGTACT 3 cut(s) 951, 1277, 1485
SchI GAGTC 2 cut(s) 461, 730
ScrFI CCNGG 2 cut(s) 1227, 1267
SduI GDGCHC 2 cut(s) 186, 255
SfaNI GCATC 3 cut(s) 292, 667, 1324
SfcI CTRYAG 1 cut(s) 1500
SfoI GGCGCC 1 cut(s) 1016
SfuI TTCGAA 1 cut(s) 815
SinI GGWCC 2 cut(s) 223, 1091
SmlI CTYRAG 4 cut(s) 485, 521, 973, 1289
SmoI CTYRAG 4 cut(s) 485, 521, 973, 1289
Sse9I AATT 8 cut(s) 191, 602, 685, 717, 827, 1039, 1112, 1202
SseBI AGGCCT 1 cut(s) 1380
SsiI CCGC 3 cut(s) 532, 995, 1331
SspDI GGCGCC 1 cut(s) 1014
SspMI CTAG 3 cut(s) 660, 729, 1338
StuI AGGCCT 1 cut(s) 1380
StyD4I CCNGG 2 cut(s) 1225, 1265
StyI CCWWGG 4 cut(s) 51, 271, 896, 1371
TaaI ACNGT 1 cut(s) 1314
TaiI ACGT 1 cut(s) 392
TaqI TCGA 4 cut(s) 815, 937, 1127, 1316
TasI AATT 8 cut(s) 191, 602, 685, 717, 827, 1039, 1112, 1202
TatI WGTACW 3 cut(s) 949, 1275, 1483
TfiI GAWTC 4 cut(s) 294, 989, 1246, 1367
Tru1I TTAA 2 cut(s) 263, 1352
Tru9I TTAA 2 cut(s) 263, 1352
TscAI CASTG 3 cut(s) 158, 589, 696
TseFI GTSAC 2 cut(s) 377, 1398
TseI GCWGC 1 cut(s) 809
Tsp45I GTSAC 2 cut(s) 377, 1398
TspDTI ATGAA 7 cut(s) 144, 382, 595, 611, 623, 662, 1125
TspGWI ACGGA 2 cut(s) 197, 1451
TspRI CASTG 3 cut(s) 158, 589, 696
VpaK11BI GGWCC 2 cut(s) 223, 1091
XapI RAATTY 1 cut(s) 602
XcmI CCANNNNNNNNNTGG 1 cut(s) 1060
XmiI GTMKAC 1 cut(s) 1515
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 3 cut(s) 660, 729, 1338
ZrmI AGTACT 3 cut(s) 951, 1277, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.