Rmu_sc0009149.1_g000020

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009149.1
OG0000264
Physical Location & Seq
Forward (+)
75440 .. 77740
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009149.1_g000020.1.cds

Sequence Viewer

Length: 2301 bp
atgaatgaagagaaagaaatggccattgtttcaccaactggggaagacccatttcgcaaagacgcctactttctcaaacccattatccctaattcctccattgatgaacctttcaagctccctcagggtttcacctccctcccaccccgttttgacccaaaaaactggccattgaagcttcgattccgtggatggcgtctcgaccaccaagacttacagacttgggtcgcccacttggcccctattcaccaatctacatggaagaaagctggcatctttgaagccatcttcaattccacgtaccaaatcaaaaggaaaaaggatttgctttgtgggtttgcagagaaatggtgttgtgagaccaacaccttcatttttccatggggtgaagcaaccatcacattggaggatgttatggttttgggaggcttctctgttttgggggactctattttcagtcctcttgaaagcagagaactgagagaaatagaagagaagcttgagaaagagcgaaaaggactctacgattactctgttgggtgtaggaatgcttgcacaacgttatggatgcagaaattcatgaagagtgggagtgaattggagcatgaggcattccttgtgttttggctgtccaggtatgtgttccacaatactcctaatagttcagtcaataaggctgttttctccattgcgattcgtttagctagggggatcccaattgcgcttgcacctgctgttcttgcccacatttatagggatttgagtatgctgaaaatgacaattgtagcttcaaatggattgaatgctaggaatgaaattgtagatgccacaatcatgtcaccatttcatttagttcaggtttgggcatgggaaaggttcgtggaacttaggcctatacctaatgtaataagctgtgctgagccaagattggctcgatgggataaggtagattgtctgaatgttggaaatatgaggagcgttttagacaaagcaggtgaaggtttcattcggcgcccttataccatggccattaagaactgtgtttttcctgcatactatgttgaaatggaaaagtgggtgttggttggtccaaacttggatggtgaacatgatctaatgtcatttgccatgtttttgagggtggctgagttagttggatttggtactagacagaaatacctccctcatcgagtggctaggcaatttggatttaatcaagacattccatgttcttctgttgctggacacagccacagttttgagaatgcaaagttgtacgttccatccaggctttctgagacagatgctagcatgagatacttgagctggtggcaggaatcagagtcacgcctcgagcagaagagtattccactgaaaaagaaaccaaagaaagccgtagaggggtcaaaagaagcaaacaagatatttaaggccaccattgcttgtgattattctccaaagaattcagaaaaagtagtgcaggtatctacaagaagggatgatgatagtgataaccttgtagctcaaggatttcctcccacatgtaatgaaatgaatgctgcagatcctatggatgaagatgcactgtctatatcagaagttctgaaacatagcaagatagataaaactgttgaaaccaaggaaagtggtgactgtgagaaattatctggtcaaattccatgttcttctgttgctggacacagccacagttttgagaatgcaaagttgtacgttccatccaggctttctgagacagatactagcatgagatacttgagctggtggcaggaatcagagtcacgcctcgagcagaagagtgttccactgaaaaataaaccaaagaaagccgtagaggggtcaaaagaagcaaacaagatatttaaggccaccattgcttgtgattattctccaaagaattcagaaaaagtagtgcaggtagctacaagaaggaatgatgatagtgataaccttgtagctctaggatttcctcccacatgtaatgaaatgaatgctgcagatcctatggatgaagatgcactgtctatatcagaagttctgaaacatagcaagatagataaaactgttgaaaccaaggaaagtggtgactgtgagaaattatctggtcaagttcaagatttggtatattcaagtgtggaaaaaggtactggtaatactatgaggtcagagggaacaaagaaggtactgaagactgaaactttgaccggagcatctaaggctaagtgtaacctgctaaaatgcagcggacagcaacacaagaggtgcaaaaaatcacatggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

766

Amino Acids

86.5

Weight (kDa)

8.23

Isoelectric Point (pI)

37.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 739, 983
Acc36I ACCTGC 5 cut(s) 739, 983, 1471, 1924, 2256
AccB1I GGYRCC 1 cut(s) 1011
AciI CCGC 1 cut(s) 2262
AclI AACGTT 1 cut(s) 560
AclWI GGATC 4 cut(s) 706, 719, 1559, 2012
AcoI YGGCCR 3 cut(s) 21, 167, 1026
AcsI RAATTY 4 cut(s) 575, 1462, 1674, 1915
AcuI CTGAAG 1 cut(s) 2225
AcyI GRCGYC 3 cut(s) 63, 196, 1012
AfaI GTAC 6 cut(s) 302, 1165, 1277, 1730, 2164, 2202
AfiI CCNNNNNNNGG 2 cut(s) 1401, 1854
AflIII ACRYGT 2 cut(s) 1541, 1994
AjnI CCWGG 3 cut(s) 632, 1286, 1739
Alw26I GTCTC 4 cut(s) 203, 353, 1292, 1745
AlwI GGATC 4 cut(s) 706, 719, 1559, 2012
Ama87I CYCGRG 2 cut(s) 1352, 1805
AoxI GGCC 7 cut(s) 21, 167, 237, 890, 1026, 1431, 1884
ApeKI GCWGC 3 cut(s) 1559, 2012, 2259
ApoI RAATTY 4 cut(s) 575, 1462, 1674, 1915
ArsI GACNNNNNNTTYG 2 cut(s) 2200, 2232
AspLEI GCGC 2 cut(s) 724, 1014
AspS9I GGNCC 2 cut(s) 238, 1088
AsuHPI GGTGA 9 cut(s) 24, 124, 239, 398, 831, 1007, 1115, 1661, 2114
AsuNHI GCTAGC 1 cut(s) 1307
AvaI CYCGRG 2 cut(s) 1352, 1805
AvaII GGWCC 1 cut(s) 1088
AxyI CCTNAGG 1 cut(s) 123
BalI TGGCCA 3 cut(s) 23, 169, 1028
BamHI GGATCC 1 cut(s) 711
BanI GGYRCC 1 cut(s) 1011
BbsI GAAGAC 2 cut(s) 51, 2213
BbvI GCAGC 3 cut(s) 1546, 1999, 2271
BccI CCATC 7 cut(s) 186, 293, 404, 930, 1094, 1291, 1744
BceAI ACGGC 2 cut(s) 1379, 1832
BciT130I CCWGG 3 cut(s) 634, 1288, 1741
BcoDI GTCTC 4 cut(s) 203, 353, 1292, 1745
BfaI CTAG 8 cut(s) 705, 807, 1167, 1197, 1308, 1761, 1979, 2299
BfmI CTRYAG 2 cut(s) 1560, 2013
BfoI RGCGCY 1 cut(s) 1015
BfuAI ACCTGC 5 cut(s) 739, 983, 1471, 1924, 2256
BglI GCCNNNNNGGC 1 cut(s) 236
BisI GCNGC 3 cut(s) 1560, 2013, 2260
BlpI GCTNAGC 1 cut(s) 918
BlsI GCNGC 3 cut(s) 1561, 2014, 2261
Bme1390I CCNGG 3 cut(s) 634, 1288, 1741
Bme18I GGWCC 1 cut(s) 1088
BmeT110I CYCGRG 2 cut(s) 1352, 1805
BmgT120I GGNCC 2 cut(s) 238, 1088
BmiI GGNNCC 3 cut(s) 240, 713, 1013
BmrFI CCNGG 3 cut(s) 634, 1288, 1741
BmrI ACTGGG 1 cut(s) 48
BmsI GCATC 7 cut(s) 282, 558, 814, 1294, 1570, 2023, 2237
BmtI GCTAGC 1 cut(s) 1311
BmuI ACTGGG 1 cut(s) 48
BoxI GACNNNNGTC 1 cut(s) 224
BpiI GAAGAC 2 cut(s) 51, 2213
Bpu1102I GCTNAGC 1 cut(s) 918
BpuEI CTTGAG 4 cut(s) 521, 1342, 1509, 1795
BsaAI YACGTR 1 cut(s) 300
BsaHI GRCGYC 3 cut(s) 63, 196, 1012
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 5 cut(s) 187, 380, 1023, 1638, 2091
BsaWI WCCGGW 1 cut(s) 2222
Bsc4I CCNNNNNNNGG 2 cut(s) 1401, 1854
Bse1I ACTGG 3 cut(s) 43, 170, 2170
Bse21I CCTNAGG 1 cut(s) 123
Bse3DI GCAATG 3 cut(s) 687, 1437, 1890
BseBI CCWGG 3 cut(s) 634, 1288, 1741
BseDI CCNNGG 5 cut(s) 187, 380, 1023, 1638, 2091
BseGI GGATG 9 cut(s) 197, 415, 573, 1105, 1283, 1504, 1579, 1736, 2032
BseLI CCNNNNNNNGG 2 cut(s) 1401, 1854
BseMI GCAATG 3 cut(s) 687, 1437, 1890
BseMII CTCAG 6 cut(s) 137, 470, 909, 1137, 1287, 1740
BseNI ACTGG 3 cut(s) 43, 170, 2170
BseRI GAGGAG 1 cut(s) 988
BseXI GCAGC 3 cut(s) 1546, 1999, 2271
BsgI GTGCAG 2 cut(s) 1499, 1952
BshFI GGCC 7 cut(s) 23, 169, 239, 892, 1028, 1433, 1886
BshNI GGYRCC 1 cut(s) 1011
BsiHKCI CYCGRG 2 cut(s) 1352, 1805
BsiSI CCGG 1 cut(s) 2223
BslFI GGGAC 1 cut(s) 458
BslI CCNNNNNNNGG 2 cut(s) 1401, 1854
BsmAI GTCTC 4 cut(s) 203, 353, 1292, 1745
BsmBI CGTCTC 1 cut(s) 203
BsmFI GGGAC 1 cut(s) 458
BsmI GAATGC 7 cut(s) 553, 611, 808, 1270, 1561, 1723, 2014
BsnI GGCC 7 cut(s) 23, 169, 239, 892, 1028, 1433, 1886
Bso31I GGTCTC 1 cut(s) 353
BsoBI CYCGRG 2 cut(s) 1352, 1805
Bsp143I GATC 4 cut(s) 711, 1111, 1564, 2017
Bsp1720I GCTNAGC 1 cut(s) 918
Bsp19I CCATGG 2 cut(s) 380, 1023
BspACI CCGC 1 cut(s) 2262
BspANI GGCC 7 cut(s) 23, 169, 239, 892, 1028, 1433, 1886
BspCNI CTCAG 6 cut(s) 136, 471, 910, 1138, 1288, 1741
BspHI TCATGA 1 cut(s) 579
BspLI GGNNCC 3 cut(s) 240, 713, 1013
BspMAI CTGCAG 2 cut(s) 1564, 2017
BspMI ACCTGC 5 cut(s) 739, 983, 1471, 1924, 2256
BspOI GCTAGC 1 cut(s) 1311
BspPI GGATC 4 cut(s) 706, 719, 1559, 2012
BspT107I GGYRCC 1 cut(s) 1011
BspTNI GGTCTC 1 cut(s) 353
BsrDI GCAATG 3 cut(s) 687, 1437, 1890
BsrI ACTGG 3 cut(s) 43, 170, 2170
BssECI CCNNGG 5 cut(s) 187, 380, 1023, 1638, 2091
BssMI GATC 4 cut(s) 711, 1111, 1564, 2017
BssNI GRCGYC 3 cut(s) 63, 196, 1012
BssT1I CCWWGG 4 cut(s) 380, 1023, 1638, 2091
Bst2UI CCWGG 3 cut(s) 634, 1288, 1741
Bst4CI ACNGT 9 cut(s) 1040, 1256, 1587, 1630, 1655, 1709, 2040, 2083, 2108
Bst6I CTCTTC 5 cut(s) 3, 486, 578, 1355, 1808
BstACI GRCGYC 3 cut(s) 63, 196, 1012
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 4 cut(s) 271, 553, 726, 1309
BstDEI CTNAG 9 cut(s) 123, 479, 887, 918, 1146, 1296, 1749, 2232, 2238
BstDSI CCRYGG 3 cut(s) 187, 380, 1023
BstF5I GGATG 9 cut(s) 197, 415, 573, 1105, 1283, 1504, 1579, 1736, 2032
BstH2I RGCGCY 1 cut(s) 1015
BstHHI GCGC 2 cut(s) 724, 1014
BstKTI GATC 4 cut(s) 714, 1114, 1567, 2020
BstMAI GTCTC 4 cut(s) 203, 353, 1292, 1745
BstMBI GATC 4 cut(s) 711, 1111, 1564, 2017
BstMWI GCNNNNNNNGC 6 cut(s) 175, 236, 740, 1439, 1892, 2234
BstNI CCWGG 3 cut(s) 634, 1288, 1741
BstNSI RCATGY 2 cut(s) 1545, 1998
BstPAI GACNNNNGTC 1 cut(s) 224
BstSCI CCNGG 3 cut(s) 632, 1286, 1739
BstSFI CTRYAG 2 cut(s) 1560, 2013
BstV1I GCAGC 3 cut(s) 1546, 1999, 2271
BstV2I GAAGAC 2 cut(s) 51, 2213
BstX2I RGATCY 3 cut(s) 711, 1564, 2017
BstXI CCANNNNNNTGG 2 cut(s) 165, 403
BstYI RGATCY 3 cut(s) 711, 1564, 2017
Bsu36I CCTNAGG 1 cut(s) 123
BsuRI GGCC 7 cut(s) 23, 169, 239, 892, 1028, 1433, 1886
BtgI CCRYGG 3 cut(s) 187, 380, 1023
BtsCI GGATG 9 cut(s) 197, 415, 573, 1105, 1283, 1504, 1579, 1736, 2032
BtsIMutI CAGTG 4 cut(s) 1370, 1583, 1823, 2036
BveI ACCTGC 5 cut(s) 739, 983, 1471, 1924, 2256
Cac8I GCNNGC 4 cut(s) 271, 553, 726, 1309
CciI TCATGA 1 cut(s) 579
CfoI GCGC 2 cut(s) 724, 1014
Cfr13I GGNCC 2 cut(s) 238, 1088
CseI GACGC 2 cut(s) 71, 185
Csp6I GTAC 6 cut(s) 301, 1164, 1276, 1729, 2163, 2201
CspCI CAANNNNNGTGG 4 cut(s) 1627, 1662, 2080, 2115
CviQI GTAC 6 cut(s) 301, 1164, 1276, 1729, 2163, 2201
DdeI CTNAG 9 cut(s) 123, 479, 887, 918, 1146, 1296, 1749, 2232, 2238
DinI GGCGCC 1 cut(s) 1013
DpnI GATC 4 cut(s) 713, 1113, 1566, 2019
DpnII GATC 4 cut(s) 711, 1111, 1564, 2017
EaeI YGGCCR 3 cut(s) 21, 167, 1026
Eam1104I CTCTTC 5 cut(s) 3, 486, 578, 1355, 1808
EarI CTCTTC 5 cut(s) 3, 486, 578, 1355, 1808
Eco130I CCWWGG 4 cut(s) 380, 1023, 1638, 2091
Eco147I AGGCCT 1 cut(s) 892
Eco31I GGTCTC 1 cut(s) 353
Eco47I GGWCC 1 cut(s) 1088
Eco57I CTGAAG 1 cut(s) 2225
Eco81I CCTNAGG 1 cut(s) 123
Eco88I CYCGRG 2 cut(s) 1352, 1805
EcoRI GAATTC 2 cut(s) 1462, 1915
EcoRII CCWGG 3 cut(s) 632, 1286, 1739
EcoT14I CCWWGG 4 cut(s) 380, 1023, 1638, 2091
EgeI GGCGCC 1 cut(s) 1013
EheI GGCGCC 1 cut(s) 1013
ErhI CCWWGG 4 cut(s) 380, 1023, 1638, 2091
Esp3I CGTCTC 1 cut(s) 203
FalI AAGNNNNNCTT 2 cut(s) 483, 515
FaqI GGGAC 1 cut(s) 458
Fnu4HI GCNGC 3 cut(s) 1560, 2013, 2260
FokI GGATG 9 cut(s) 204, 422, 580, 1112, 1270, 1511, 1586, 1723, 2039
Fsp4HI GCNGC 3 cut(s) 1560, 2013, 2260
FspBI CTAG 8 cut(s) 705, 807, 1167, 1197, 1308, 1761, 1979, 2299
GlaI GCGC 2 cut(s) 723, 1013
GluI GCNGC 3 cut(s) 1560, 2013, 2260
HaeII RGCGCY 1 cut(s) 1015
HaeIII GGCC 7 cut(s) 23, 169, 239, 892, 1028, 1433, 1886
HapII CCGG 1 cut(s) 2223
HgaI GACGC 2 cut(s) 71, 185
HhaI GCGC 2 cut(s) 724, 1014
Hin1I GRCGYC 3 cut(s) 63, 196, 1012
Hin6I GCGC 2 cut(s) 722, 1012
HinP1I GCGC 2 cut(s) 722, 1012
HindIII AAGCTT 2 cut(s) 176, 497
HinfI GANTC 8 cut(s) 183, 446, 519, 694, 1337, 1343, 1790, 1796
HpaII CCGG 1 cut(s) 2223
HphI GGTGA 9 cut(s) 24, 124, 239, 398, 831, 1007, 1115, 1661, 2114
Hpy166II GTNNAC 1 cut(s) 1106
Hpy188III TCNNGA 5 cut(s) 200, 464, 580, 1217, 2132
Hpy8I GTNNAC 1 cut(s) 1106
HpyAV CCTTC 5 cut(s) 379, 992, 1488, 1941, 2191
HpyCH4III ACNGT 9 cut(s) 1040, 1256, 1587, 1630, 1655, 1709, 2040, 2083, 2108
HpyCH4IV ACGT 4 cut(s) 299, 560, 1278, 1731
HpyF10VI GCNNNNNNNGC 6 cut(s) 175, 236, 740, 1439, 1892, 2234
HpyF3I CTNAG 9 cut(s) 123, 479, 887, 918, 1146, 1296, 1749, 2232, 2238
HpySE526I ACGT 4 cut(s) 299, 560, 1278, 1731
Hsp92I GRCGYC 3 cut(s) 63, 196, 1012
HspAI GCGC 2 cut(s) 722, 1012
KasI GGCGCC 1 cut(s) 1011
Kzo9I GATC 4 cut(s) 711, 1111, 1564, 2017
LmnI GCTCC 4 cut(s) 123, 601, 975, 2225
Lsp1109I GCAGC 3 cut(s) 1546, 1999, 2271
LweI GCATC 7 cut(s) 282, 558, 814, 1294, 1570, 2023, 2237
MaeI CTAG 8 cut(s) 705, 807, 1167, 1197, 1308, 1761, 1979, 2299
MaeII ACGT 4 cut(s) 299, 560, 1278, 1731
MaeIII GTNAC 6 cut(s) 837, 1344, 1649, 1797, 2102, 2243
MalI GATC 4 cut(s) 713, 1113, 1566, 2019
MboI GATC 4 cut(s) 711, 1111, 1564, 2017
MfeI CAATTG 2 cut(s) 717, 780
MflI RGATCY 3 cut(s) 711, 1564, 2017
MlsI TGGCCA 3 cut(s) 23, 169, 1028
MluNI TGGCCA 3 cut(s) 23, 169, 1028
Mly113I GGCGCC 1 cut(s) 1012
MlyI GAGTC 4 cut(s) 440, 513, 1352, 1805
MmeI TCCRAC 2 cut(s) 943, 1135
Mox20I TGGCCA 3 cut(s) 23, 169, 1028
MscI TGGCCA 3 cut(s) 23, 169, 1028
MseI TTAA 4 cut(s) 1032, 1212, 1428, 1881
MslI CAYNNNNRTG 1 cut(s) 833
Msp20I TGGCCA 3 cut(s) 23, 169, 1028
MspA1I CMGCKG 1 cut(s) 2262
MspI CCGG 1 cut(s) 2223
MspR9I CCNGG 3 cut(s) 634, 1288, 1741
MunI CAATTG 2 cut(s) 717, 780
Mva1269I GAATGC 7 cut(s) 553, 611, 808, 1270, 1561, 1723, 2014
MvaI CCWGG 3 cut(s) 634, 1288, 1741
MwoI GCNNNNNNNGC 6 cut(s) 175, 236, 740, 1439, 1892, 2234
NarI GGCGCC 1 cut(s) 1012
NcoI CCATGG 2 cut(s) 380, 1023
NdeII GATC 4 cut(s) 711, 1111, 1564, 2017
NheI GCTAGC 1 cut(s) 1307
NlaIV GGNNCC 3 cut(s) 240, 713, 1013
NmuCI GTSAC 5 cut(s) 837, 1344, 1649, 1797, 2102
NspI RCATGY 2 cut(s) 1545, 1998
PaeR7I CTCGAG 2 cut(s) 1352, 1805
PagI TCATGA 1 cut(s) 579
PaqCI CACCTGC 2 cut(s) 739, 983
PceI AGGCCT 1 cut(s) 892
PciI ACATGT 2 cut(s) 1541, 1994
PctI GAATGC 7 cut(s) 553, 611, 808, 1270, 1561, 1723, 2014
PfeI GAWTC 4 cut(s) 183, 694, 1337, 1790
PkrI GCNGC 3 cut(s) 1561, 2014, 2261
PleI GAGTC 4 cut(s) 440, 513, 1351, 1804
PluTI GGCGCC 1 cut(s) 1015
PpsI GAGTC 4 cut(s) 440, 513, 1351, 1804
Ppu21I YACGTR 1 cut(s) 300
PscI ACATGT 2 cut(s) 1541, 1994
PshAI GACNNNNGTC 1 cut(s) 224
Psp1406I AACGTT 1 cut(s) 560
Psp6I CCWGG 3 cut(s) 632, 1286, 1739
PspGI CCWGG 3 cut(s) 632, 1286, 1739
PspN4I GGNNCC 3 cut(s) 240, 713, 1013
PspPI GGNCC 2 cut(s) 238, 1088
PspXI VCTCGAGB 2 cut(s) 1352, 1805
PstI CTGCAG 2 cut(s) 1564, 2017
PsuI RGATCY 3 cut(s) 711, 1564, 2017
RsaI GTAC 6 cut(s) 302, 1165, 1277, 1730, 2164, 2202
RsaNI GTAC 6 cut(s) 301, 1164, 1276, 1729, 2163, 2201
RseI CAYNNNNRTG 1 cut(s) 833
SaqAI TTAA 4 cut(s) 1032, 1212, 1428, 1881
SatI GCNGC 3 cut(s) 1560, 2013, 2260
Sau3AI GATC 4 cut(s) 711, 1111, 1564, 2017
Sau96I GGNCC 2 cut(s) 238, 1088
SchI GAGTC 4 cut(s) 440, 513, 1352, 1805
ScrFI CCNGG 3 cut(s) 634, 1288, 1741
SfaNI GCATC 7 cut(s) 282, 558, 814, 1294, 1570, 2023, 2237
SfcI CTRYAG 2 cut(s) 1560, 2013
SfoI GGCGCC 1 cut(s) 1013
Sfr274I CTCGAG 2 cut(s) 1352, 1805
SinI GGWCC 1 cut(s) 1088
SlaI CTCGAG 2 cut(s) 1352, 1805
SmiMI CAYNNNNRTG 1 cut(s) 833
SmlI CTYRAG 6 cut(s) 500, 1321, 1352, 1524, 1774, 1805
SmoI CTYRAG 6 cut(s) 500, 1321, 1352, 1524, 1774, 1805
SseBI AGGCCT 1 cut(s) 892
SsiI CCGC 1 cut(s) 2262
SspDI GGCGCC 1 cut(s) 1011
SspMI CTAG 8 cut(s) 705, 807, 1167, 1197, 1308, 1761, 1979, 2299
StuI AGGCCT 1 cut(s) 892
StyD4I CCNGG 3 cut(s) 632, 1286, 1739
StyI CCWWGG 4 cut(s) 380, 1023, 1638, 2091
TaaI ACNGT 9 cut(s) 1040, 1256, 1587, 1630, 1655, 1709, 2040, 2083, 2108
TaiI ACGT 4 cut(s) 302, 563, 1281, 1734
TaqI TCGA 6 cut(s) 181, 201, 934, 1189, 1353, 1806
TfiI GAWTC 4 cut(s) 183, 694, 1337, 1790
Tru1I TTAA 4 cut(s) 1032, 1212, 1428, 1881
Tru9I TTAA 4 cut(s) 1032, 1212, 1428, 1881
TscAI CASTG 4 cut(s) 1377, 1590, 1830, 2043
TseFI GTSAC 5 cut(s) 837, 1344, 1649, 1797, 2102
TseI GCWGC 3 cut(s) 1559, 2012, 2259
Tsp45I GTSAC 5 cut(s) 837, 1344, 1649, 1797, 2102
TspGWI ACGGA 1 cut(s) 176
TspRI CASTG 4 cut(s) 1377, 1590, 1830, 2043
VpaK11BI GGWCC 1 cut(s) 1088
XapI RAATTY 4 cut(s) 575, 1462, 1674, 1915
XceI RCATGY 2 cut(s) 1545, 1998
XhoI CTCGAG 2 cut(s) 1352, 1805
XspI CTAG 8 cut(s) 705, 807, 1167, 1197, 1308, 1761, 1979, 2299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.