Rmu_sc0032545.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032545.1
OG0000264
Physical Location & Seq
Reverse (-)
2 .. 1901
1900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032545.1_g000001.1.cds

Sequence Viewer

Length: 1900 bp
atgtttgaagccgttgagcactcccctcactccaaaaggccaaaactttctccctttcctagctgcaaggagactccgccggaaaccatggttgaagagaaagaagacctcatgatttcaccacctggtggacacccatttcacaaaacagcccactatctcaaacccatttcgccttcctcccttttcgagtctttcacctcccatatcccgacctcacccttggacccaaaaaagtggccatcccagcttcagttccgtggatggcgccgcgaccaccaagacttgctgacttgggttcaccacttggcttctactcaccaatccacgtggaagaaagccggcatttacgaacccatcttcaactcgacttaccagataagaagagacaacgacctggtttgtgggtttgcagagaaatggtgttgtgagaccaacaccttcgtttttccatggggtgaaaccacagtcacattggaggatgttatggttttgggaggcttctgtgttttgggagactctattttgagtcctattgaaagcagagagctgaaagaaatagaagagaaacttgagaaagagcgaaaagggctttacgattacagtgggcgtgggtctaaggtggccagcgcagagttatggatgaagaaattcatgaagagcgggagtaaactagagcacctagcatttctcgtcttttggttgtccaggtatgttttccacggcagtcgtgattcagtaaacaaggctgttttctctattgcaattcatttagataggggcattcggattgcgcttgcaccggctgttcttgctcacatttatggagatttgagtctgcttaaaaggacccttgtagcttcaaatggcagtaatgaattaaagctagagtcaccatttcatttagttcaggtttgggcatgggaaaggtttttggaacttaggccaaagcccaatgttatgatctatgctgagccaagattggctagatgggatagaatacatggtcaggatttcggaaatttgaggattgttttagactctgctggagaatgtttcatgtggcgcccttatgccattgccattgaaaactggaagcttcctagttactgttcagaaaaagataggtgcgttggtcctggtttggatgatgagttcctttcatttgctctatgcttgagggtggttgatttggttggatttggtcgaaatgagcgataccttccgcatagggtggctaggcaatttggatatgatcaagatattccgtgtgtcattgctcaatccaatgatggttctggtattttcattcctcatatatcctggaaatatcacatgaaggaaattaaggatgtaaaattgtatattccatctaggctgtctgaagcagatgtgagcacaagatacatgaaatggtgggaggaaacggtatcaggtctcaaacacataactaagcctaggatgccaccgaagaaaaaagcaaagactactgagggatcactactgacgggtaaacctgccctcaggcatcctggtttccagcgaacgaaagttgctgagggttcaaatgaaagaaacaggtttactggtttcaccattccttctgtttcttgtccaaagagttatgcaaaagtagtaaagatttccaaagtagataatgtaggtaatgattcccttgttcctcccggatttcctcccagatttcctcccacaggtaatatgatggaagttggagacactatggacaaagatgaactaactagtccagaaattttggaaaaagggaagcaaaaaaacgttgaaactagaaaaggggttggtgattcaattgctgatggaagttctgttgatgatattatgaagtcagaaagattggagaaagaggttatgctgagtccga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

633

Amino Acids

72.04

Weight (kDa)

8.64

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1525
AccB1I GGYRCC 2 cut(s) 267, 1065
AccB7I CCANNNNNTGG 1 cut(s) 128
AccBSI CCGCTC 1 cut(s) 663
AccII CGCG 1 cut(s) 273
AciI CCGC 4 cut(s) 77, 271, 663, 1226
AclI AACGTT 1 cut(s) 1797
AclWI GGATC 1 cut(s) 1504
AcoI YGGCCR 2 cut(s) 239, 624
AcsI RAATTY 3 cut(s) 650, 1021, 1770
AcuI CTGAAG 2 cut(s) 236, 1404
AcvI CACGTG 1 cut(s) 330
AcyI GRCGYC 2 cut(s) 268, 1066
AdeI CACNNNGTG 1 cut(s) 128
AfiI CCNNNNNNNGG 2 cut(s) 128, 1712
AgsI TTSAA 9 cut(s) 8, 95, 364, 539, 864, 1088, 1566, 1802, 1827
AhlI ACTAGT 1 cut(s) 1760
AjnI CCWGG 6 cut(s) 124, 396, 707, 1138, 1322, 1531
AloI GAACNNNNNNTCC 2 cut(s) 1139, 1171
AluBI AGCT 6 cut(s) 63, 250, 550, 860, 886, 1099
AluI AGCT 6 cut(s) 63, 250, 550, 860, 886, 1099
Alw21I GWGCWC 3 cut(s) 21, 681, 1400
Alw26I GTCTC 6 cut(s) 65, 381, 425, 510, 1442, 1728
AlwI GGATC 1 cut(s) 1504
AoxI GGCC 4 cut(s) 38, 239, 624, 944
ApeKI GCWGC 1 cut(s) 63
ApoI RAATTY 3 cut(s) 650, 1021, 1770
Asp700I GAANNNNTTC 1 cut(s) 650
AspA2I CCTAGG 1 cut(s) 1457
AspLEI GCGC 4 cut(s) 270, 632, 796, 1068
AspS9I GGNCC 3 cut(s) 226, 849, 1136
AsuC2I CCSGG 1 cut(s) 1686
AsuHPI GGTGA 9 cut(s) 111, 190, 210, 293, 311, 470, 885, 1585, 1832
AvaII GGWCC 3 cut(s) 226, 849, 1136
AvrII CCTAGG 1 cut(s) 1457
AxyI CCTNAGG 1 cut(s) 1523
BalI TGGCCA 2 cut(s) 241, 626
BanI GGYRCC 2 cut(s) 267, 1065
BbrPI CACGTG 1 cut(s) 330
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 3 cut(s) 21, 681, 1400
BbvCI CCTCAGC 1 cut(s) 1557
BbvI GCAGC 1 cut(s) 50
BccI CCATC 8 cut(s) 250, 258, 365, 984, 1286, 1378, 1717, 1829
BceAI ACGGC 1 cut(s) 739
BciT130I CCWGG 6 cut(s) 126, 398, 709, 1140, 1324, 1533
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 1 cut(s) 1686
BcoDI GTCTC 6 cut(s) 65, 381, 425, 510, 1442, 1728
BcuI ACTAGT 1 cut(s) 1760
BfoI RGCGCY 2 cut(s) 271, 1069
BfuAI ACCTGC 1 cut(s) 1525
BisI GCNGC 2 cut(s) 64, 271
BlnI CCTAGG 1 cut(s) 1457
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 2 cut(s) 65, 272
Bme1390I CCNGG 7 cut(s) 126, 398, 709, 1140, 1324, 1533, 1686
Bme18I GGWCC 3 cut(s) 226, 849, 1136
BmgT120I GGNCC 3 cut(s) 226, 849, 1136
BmiI GGNNCC 4 cut(s) 228, 269, 851, 1067
BmrFI CCNGG 7 cut(s) 126, 398, 709, 1140, 1324, 1533, 1686
BmsI GCATC 2 cut(s) 1452, 1537
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 1068
Bpu10I CCTNAGC 1 cut(s) 1557
Bpu1102I GCTNAGC 1 cut(s) 972
BpuEI CTTGAG 2 cut(s) 593, 1198
BpuMI CCSGG 1 cut(s) 1686
BsaAI YACGTR 1 cut(s) 330
BsaHI GRCGYC 2 cut(s) 268, 1066
BsaI GGTCTC 2 cut(s) 425, 1442
BsaJI CCNNGG 6 cut(s) 87, 222, 259, 452, 721, 1457
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 1712
Bse118I RCCGGY 2 cut(s) 341, 802
Bse1I ACTGG 2 cut(s) 1097, 1591
Bse21I CCTNAGG 1 cut(s) 1523
Bse3DI GCAATG 2 cut(s) 1077, 1275
BseBI CCWGG 6 cut(s) 126, 398, 709, 1140, 1324, 1533
BseDI CCNNGG 6 cut(s) 87, 222, 259, 452, 721, 1457
BseGI GGATG 8 cut(s) 242, 269, 487, 648, 1153, 1357, 1467, 1528
BseLI CCNNNNNNNGG 2 cut(s) 128, 1712
BseMI GCAATG 2 cut(s) 1077, 1275
BseMII CTCAG 5 cut(s) 963, 1482, 1537, 1548, 1883
BseNI ACTGG 2 cut(s) 1097, 1591
BseXI GCAGC 1 cut(s) 50
BseYI CCCAGC 1 cut(s) 246
Bsh1236I CGCG 1 cut(s) 273
BshFI GGCC 4 cut(s) 40, 241, 626, 946
BshNI GGYRCC 2 cut(s) 267, 1065
BsiHKAI GWGCWC 3 cut(s) 21, 681, 1400
BsiSI CCGG 4 cut(s) 80, 342, 803, 1686
BslI CCNNNNNNNGG 2 cut(s) 128, 1712
BsmAI GTCTC 6 cut(s) 65, 381, 425, 510, 1442, 1728
BsmI GAATGC 1 cut(s) 783
BsnI GGCC 4 cut(s) 40, 241, 626, 946
Bso31I GGTCTC 2 cut(s) 425, 1442
Bsp1286I GDGCHC 3 cut(s) 21, 681, 1400
Bsp143I GATC 3 cut(s) 963, 1255, 1496
Bsp1720I GCTNAGC 1 cut(s) 972
Bsp19I CCATGG 2 cut(s) 87, 452
BspACI CCGC 4 cut(s) 77, 271, 663, 1226
BspANI GGCC 4 cut(s) 40, 241, 626, 946
BspCNI CTCAG 5 cut(s) 964, 1483, 1536, 1549, 1884
BspFNI CGCG 1 cut(s) 273
BspHI TCATGA 2 cut(s) 111, 654
BspLI GGNNCC 4 cut(s) 228, 269, 851, 1067
BspMI ACCTGC 1 cut(s) 1525
BspPI GGATC 1 cut(s) 1504
BspQI GCTCTTC 1 cut(s) 653
BspT107I GGYRCC 2 cut(s) 267, 1065
BspTNI GGTCTC 2 cut(s) 425, 1442
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 2 cut(s) 1077, 1275
BsrFI RCCGGY 2 cut(s) 341, 802
BsrI ACTGG 2 cut(s) 1097, 1591
BssAI RCCGGY 2 cut(s) 341, 802
BssECI CCNNGG 6 cut(s) 87, 222, 259, 452, 721, 1457
BssMI GATC 3 cut(s) 963, 1255, 1496
BssNI GRCGYC 2 cut(s) 268, 1066
BssT1I CCWWGG 4 cut(s) 87, 222, 452, 1457
Bst2UI CCWGG 6 cut(s) 126, 398, 709, 1140, 1324, 1533
Bst4CI ACNGT 4 cut(s) 469, 605, 1112, 1429
Bst6I CTCTTC 4 cut(s) 90, 379, 558, 653
BstACI GRCGYC 2 cut(s) 268, 1066
BstBAI YACGTR 1 cut(s) 330
BstC8I GCNNGC 3 cut(s) 343, 628, 798
BstDEI CTNAG 8 cut(s) 618, 941, 972, 1452, 1491, 1523, 1557, 1892
BstDSI CCRYGG 4 cut(s) 87, 259, 452, 721
BstENI CCTNNNNNAGG 1 cut(s) 1710
BstF5I GGATG 8 cut(s) 242, 269, 487, 648, 1153, 1357, 1467, 1528
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 2 cut(s) 271, 1069
BstHHI GCGC 4 cut(s) 270, 632, 796, 1068
BstKTI GATC 3 cut(s) 966, 1258, 1499
BstMAI GTCTC 6 cut(s) 65, 381, 425, 510, 1442, 1728
BstMBI GATC 3 cut(s) 963, 1255, 1496
BstMWI GCNNNNNNNGC 4 cut(s) 247, 589, 812, 1462
BstNI CCWGG 6 cut(s) 126, 398, 709, 1140, 1324, 1533
BstSCI CCNGG 7 cut(s) 124, 396, 707, 1138, 1322, 1531, 1684
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 1 cut(s) 50
BstV2I GAAGAC 1 cut(s) 111
BstXI CCANNNNNNTGG 1 cut(s) 237
Bsu36I CCTNAGG 1 cut(s) 1523
BsuRI GGCC 4 cut(s) 40, 241, 626, 946
BtgI CCRYGG 4 cut(s) 87, 259, 452, 721
BtsCI GGATG 8 cut(s) 242, 269, 487, 648, 1153, 1357, 1467, 1528
BtsIMutI CAGTG 1 cut(s) 610
BveI ACCTGC 1 cut(s) 1525
Cac8I GCNNGC 3 cut(s) 343, 628, 798
CciI TCATGA 2 cut(s) 111, 654
CfoI GCGC 4 cut(s) 270, 632, 796, 1068
Cfr10I RCCGGY 2 cut(s) 341, 802
Cfr13I GGNCC 3 cut(s) 226, 849, 1136
CsiI ACCWGGT 2 cut(s) 124, 396
CspCI CAANNNNNGTGG 2 cut(s) 311, 346
CviAII CATG 9 cut(s) 88, 112, 453, 655, 921, 1004, 1060, 1336, 1408
DdeI CTNAG 8 cut(s) 618, 941, 972, 1452, 1491, 1523, 1557, 1892
DinI GGCGCC 2 cut(s) 269, 1067
DpnI GATC 3 cut(s) 965, 1257, 1498
DpnII GATC 3 cut(s) 963, 1255, 1496
DraIII CACNNNGTG 1 cut(s) 128
EaeI YGGCCR 2 cut(s) 239, 624
Eam1104I CTCTTC 4 cut(s) 90, 379, 558, 653
EarI CTCTTC 4 cut(s) 90, 379, 558, 653
EciI GGCGGA 1 cut(s) 66
Eco130I CCWWGG 4 cut(s) 87, 222, 452, 1457
Eco31I GGTCTC 2 cut(s) 425, 1442
Eco47I GGWCC 3 cut(s) 226, 849, 1136
Eco57I CTGAAG 2 cut(s) 236, 1404
Eco72I CACGTG 1 cut(s) 330
Eco81I CCTNAGG 1 cut(s) 1523
EcoNI CCTNNNNNAGG 1 cut(s) 1710
EcoO109I RGGNCCY 1 cut(s) 849
EcoRII CCWGG 6 cut(s) 124, 396, 707, 1138, 1322, 1531
EcoT14I CCWWGG 4 cut(s) 87, 222, 452, 1457
EgeI GGCGCC 2 cut(s) 269, 1067
EheI GGCGCC 2 cut(s) 269, 1067
ErhI CCWWGG 4 cut(s) 87, 222, 452, 1457
FaeI CATG 9 cut(s) 91, 115, 456, 658, 924, 1007, 1063, 1339, 1411
FalI AAGNNNNNCTT 2 cut(s) 555, 587
FatI CATG 9 cut(s) 87, 111, 452, 654, 920, 1003, 1059, 1335, 1407
FauI CCCGC 1 cut(s) 656
FbaI TGATCA 1 cut(s) 1255
Fnu4HI GCNGC 2 cut(s) 64, 271
FokI GGATG 8 cut(s) 229, 276, 494, 655, 1160, 1364, 1474, 1515
Fsp4HI GCNGC 2 cut(s) 64, 271
GlaI GCGC 4 cut(s) 269, 631, 795, 1067
GluI GCNGC 2 cut(s) 64, 271
GsaI CCCAGC 1 cut(s) 250
GsuI CTGGAG 1 cut(s) 1068
HaeII RGCGCY 2 cut(s) 271, 1069
HaeIII GGCC 4 cut(s) 40, 241, 626, 946
HapII CCGG 4 cut(s) 80, 342, 803, 1686
HhaI GCGC 4 cut(s) 270, 632, 796, 1068
Hin1I GRCGYC 2 cut(s) 268, 1066
Hin1II CATG 9 cut(s) 91, 115, 456, 658, 924, 1007, 1063, 1339, 1411
Hin6I GCGC 4 cut(s) 268, 630, 794, 1066
HinP1I GCGC 4 cut(s) 268, 630, 794, 1066
HindIII AAGCTT 1 cut(s) 1097
HpaII CCGG 4 cut(s) 80, 342, 803, 1686
HphI GGTGA 9 cut(s) 111, 190, 210, 293, 311, 470, 885, 1585, 1832
Hpy166II GTNNAC 6 cut(s) 131, 301, 671, 742, 1514, 1584
Hpy188I TCNGA 6 cut(s) 789, 1019, 1117, 1384, 1867, 1899
Hpy188III TCNNGA 7 cut(s) 112, 211, 655, 731, 1010, 1259, 1766
Hpy8I GTNNAC 6 cut(s) 131, 301, 671, 742, 1514, 1584
HpyAV CCTTC 5 cut(s) 186, 451, 1232, 1333, 1611
HpyCH4III ACNGT 4 cut(s) 469, 605, 1112, 1429
HpyCH4IV ACGT 2 cut(s) 329, 1797
HpyCH4V TGCA 5 cut(s) 66, 413, 764, 800, 1628
HpyF10VI GCNNNNNNNGC 4 cut(s) 247, 589, 812, 1462
HpyF3I CTNAG 8 cut(s) 618, 941, 972, 1452, 1491, 1523, 1557, 1892
HpySE526I ACGT 2 cut(s) 329, 1797
Hsp92I GRCGYC 2 cut(s) 268, 1066
Hsp92II CATG 9 cut(s) 91, 115, 456, 658, 924, 1007, 1063, 1339, 1411
HspAI GCGC 4 cut(s) 268, 630, 794, 1066
KasI GGCGCC 2 cut(s) 267, 1065
KroI GCCGGC 1 cut(s) 341
KroNI GCCGGC 1 cut(s) 343
Ksp22I TGATCA 1 cut(s) 1255
Kzo9I GATC 3 cut(s) 963, 1255, 1496
LguI GCTCTTC 1 cut(s) 653
Lsp1109I GCAGC 1 cut(s) 50
LweI GCATC 2 cut(s) 1452, 1537
MabI ACCWGGT 2 cut(s) 124, 396
MaeII ACGT 2 cut(s) 329, 1797
MaeIII GTNAC 3 cut(s) 469, 891, 1106
MalI GATC 3 cut(s) 965, 1257, 1498
MbiI CCGCTC 1 cut(s) 663
MboI GATC 3 cut(s) 963, 1255, 1496
MboII GAAGA 9 cut(s) 107, 116, 346, 352, 396, 575, 658, 670, 1483
MfeI CAATTG 1 cut(s) 1827
MhlI GDGCHC 3 cut(s) 21, 681, 1400
MlsI TGGCCA 2 cut(s) 241, 626
MluCI AATT 9 cut(s) 650, 765, 878, 1021, 1244, 1344, 1358, 1770, 1827
MluNI TGGCCA 2 cut(s) 241, 626
Mly113I GGCGCC 2 cut(s) 268, 1066
MlyI GAGTC 7 cut(s) 67, 200, 512, 538, 844, 899, 1034
MmeI TCCRAC 2 cut(s) 1177, 1711
Mox20I TGGCCA 2 cut(s) 241, 626
MroNI GCCGGC 1 cut(s) 341
MroXI GAANNNNTTC 1 cut(s) 650
MscI TGGCCA 2 cut(s) 241, 626
MseI TTAA 3 cut(s) 843, 881, 1347
MslI CAYNNNNRTG 1 cut(s) 822
Msp20I TGGCCA 2 cut(s) 241, 626
MspI CCGG 4 cut(s) 80, 342, 803, 1686
MspR9I CCNGG 7 cut(s) 126, 398, 709, 1140, 1324, 1533, 1686
MunI CAATTG 1 cut(s) 1827
Mva1269I GAATGC 1 cut(s) 783
MvaI CCWGG 6 cut(s) 126, 398, 709, 1140, 1324, 1533
MvnI CGCG 1 cut(s) 273
MwoI GCNNNNNNNGC 4 cut(s) 247, 589, 812, 1462
NaeI GCCGGC 1 cut(s) 343
NarI GGCGCC 2 cut(s) 268, 1066
NciI CCSGG 1 cut(s) 1686
NcoI CCATGG 2 cut(s) 87, 452
NdeII GATC 3 cut(s) 963, 1255, 1496
NgoMIV GCCGGC 1 cut(s) 341
NlaIII CATG 9 cut(s) 91, 115, 456, 658, 924, 1007, 1063, 1339, 1411
NlaIV GGNNCC 4 cut(s) 228, 269, 851, 1067
NmuCI GTSAC 2 cut(s) 469, 891
PagI TCATGA 2 cut(s) 111, 654
PciSI GCTCTTC 1 cut(s) 653
PcsI WCGNNNNNNNCGW 1 cut(s) 1213
PctI GAATGC 1 cut(s) 783
PdiI GCCGGC 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 3 cut(s) 734, 1670, 1823
PflMI CCANNNNNTGG 1 cut(s) 128
PfoI TCCNGGA 2 cut(s) 1322, 1684
PkrI GCNGC 2 cut(s) 65, 272
PleI GAGTC 7 cut(s) 67, 199, 512, 537, 843, 898, 1034
PluTI GGCGCC 2 cut(s) 271, 1069
PmaCI CACGTG 1 cut(s) 330
PmlI CACGTG 1 cut(s) 330
PpsI GAGTC 7 cut(s) 67, 199, 512, 537, 843, 898, 1034
Ppu21I YACGTR 1 cut(s) 330
PpuMI RGGWCCY 1 cut(s) 849
Psp1406I AACGTT 1 cut(s) 1797
Psp5II RGGWCCY 1 cut(s) 849
Psp6I CCWGG 6 cut(s) 124, 396, 707, 1138, 1322, 1531
PspCI CACGTG 1 cut(s) 330
PspFI CCCAGC 1 cut(s) 246
PspGI CCWGG 6 cut(s) 124, 396, 707, 1138, 1322, 1531
PspN4I GGNNCC 4 cut(s) 228, 269, 851, 1067
PspPI GGNCC 3 cut(s) 226, 849, 1136
PspPPI RGGWCCY 1 cut(s) 849
RseI CAYNNNNRTG 1 cut(s) 822
SapI GCTCTTC 1 cut(s) 653
SaqAI TTAA 3 cut(s) 843, 881, 1347
SatI GCNGC 2 cut(s) 64, 271
Sau3AI GATC 3 cut(s) 963, 1255, 1496
Sau96I GGNCC 3 cut(s) 226, 849, 1136
SchI GAGTC 7 cut(s) 67, 200, 512, 538, 844, 899, 1034
ScrFI CCNGG 7 cut(s) 126, 398, 709, 1140, 1324, 1533, 1686
SduI GDGCHC 3 cut(s) 21, 681, 1400
SexAI ACCWGGT 2 cut(s) 124, 396
SfaNI GCATC 2 cut(s) 1452, 1537
SfoI GGCGCC 2 cut(s) 269, 1067
SinI GGWCC 3 cut(s) 226, 849, 1136
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 2 cut(s) 572, 1177
SmoI CTYRAG 2 cut(s) 572, 1177
SpeI ACTAGT 1 cut(s) 1760
Sse9I AATT 9 cut(s) 650, 765, 878, 1021, 1244, 1344, 1358, 1770, 1827
SsiI CCGC 4 cut(s) 77, 271, 663, 1226
SspDI GGCGCC 2 cut(s) 267, 1065
StyD4I CCNGG 7 cut(s) 124, 396, 707, 1138, 1322, 1531, 1684
StyI CCWWGG 4 cut(s) 87, 222, 452, 1457
TaaI ACNGT 4 cut(s) 469, 605, 1112, 1429
TaiI ACGT 2 cut(s) 332, 1800
TaqI TCGA 3 cut(s) 189, 368, 1207
TasI AATT 9 cut(s) 650, 765, 878, 1021, 1244, 1344, 1358, 1770, 1827
TauI GCSGC 1 cut(s) 273
TfiI GAWTC 3 cut(s) 734, 1670, 1823
Tru1I TTAA 3 cut(s) 843, 881, 1347
Tru9I TTAA 3 cut(s) 843, 881, 1347
TscAI CASTG 1 cut(s) 610
TseFI GTSAC 2 cut(s) 469, 891
TseI GCWGC 1 cut(s) 63
Tsp45I GTSAC 2 cut(s) 469, 891
TspGWI ACGGA 2 cut(s) 248, 1257
TspRI CASTG 1 cut(s) 610
Van91I CCANNNNNTGG 1 cut(s) 128
VpaK11BI GGWCC 3 cut(s) 226, 849, 1136
XagI CCTNNNNNAGG 1 cut(s) 1710
XapI RAATTY 3 cut(s) 650, 1021, 1770
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XmaJI CCTAGG 1 cut(s) 1457
XmnI GAANNNNTTC 1 cut(s) 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.