Rw0G001950

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00061
OG0000264
Physical Location & Seq
Forward (+)
764 .. 9667
8904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G001950.1

Sequence Viewer

Length: 1545 bp
ATGCAGGACAGAATCACAGACACCATGATTGAAGTGCAAGAAGATGTGGCCATGGTTTCACCAACTGGAGGAGACCCATTTCGGAAAAGAGCCTACTTTCTCAAACCCATTGTTGCTTCCTCCATTGATGAACCTCCTCCTGAGCTTTCCCAAATTAACTCCTCCCTCCCATCAGGTTTTGAGCCCAAGAAATTGAAGCTTGAAATCCGTGGATGGCGTCTGGACCACAAAGACTTGAAGACTTGGGTGGAGCACTTGGCTTTAACTCACCAAGGTACCTGGAAGAGAGCTGGAATCTATGATGCCATCTTTAATTCCATGTACGAAATCCGAAAGAAGAATGATTTGGTTCGTGGGCTTGGCGAGAAATGGTGCTGTGACACCAACACGTTCATTTTTGATTGGGTTGAAGCAACTATTTCTTTGGAAGATGTGATGGTGTTGGGAGGGTTTTCTGTTTTGGGAGACTCTGTTTTCAGTCCTCTTGAGAGCAGAGAACTGAGAGAAGTGGAGAACAGACTTGAGAAAGTGAGAAGGGGATTTCAAAATAATGGAGGTCAGGGCTGGGGAGTTGCTTACACTGATTTGTGGATGAAGGAATTCATGAACAGTGGGAGTGATTTGGAGCATGAGGCATTTCTCGTGTTCTGGTTGTCTAGGTATGTTTTTCATGATGCTCGTAACTCAGTGAACAAGGCTGTGTTTTCCATTGCAATTCGTTTAGCTAGAGGGATTCGCATTGCGCTTGCGCCTGCTGTTCTTGCAAACATTTATAGAGATTTGGGTATGTTGAAGAGGAGTATTGCAGCTTCGAATGAGTTGAAGGTGACGATCAAGTCGCCATTCCATTTGGTTCAGGTTTGGGCTTGGGAGAGATTTCTGGAACTTCGGCCAAGGCCAAATGGTATCAGAAATGCTGAGCCGAGATTGGCTCGATGGGATAAAGTACTTGGTCTAAATGTTGGAAACTTGAGGAGCGTTTTGGATTCGGCGGGAGAAGGTTTCTTGTGGCGCCCTTATGCCATTGCCATTGAGAATTGGAAACTTGCCAAGTATTTTGTGGAGAAGGAGAAGTGGGTGGTGGTTGGTCCCAGTTTGAATGATGATGAATTGCTGTCATTTACGGTATGCCTGAGGGTGAATGAGTTGGTTGGATTTGGTACTAAACAGCAGTACGTTCCACACCGAGTGGCTATGCAATTTGGTTACGATCAGGACGTCCCAGTATGTGATAATGTGATATTGTATATACCATCGAGGCTTTCTGAGGCGGATGCTAGCACAAGATACTTAAAGTGGAGGAAGGAATCCATGGCAGGCCTCAAACACAAAAGTATGTCACCACAAAAGAAAGCAAAGGAAGCTGTCAATGAAATTTATGATGTCACCATTATTCCTTGTATCCATTCTCCAAAGAAGGCAGAAGAAGTGGTGCAGGTTTCTGCAGGAAGGAATGTATACGAAGGTAATGATTCCCTTGTGCCTCCCGGATTCCCTCCCAAAAGGTATAGGCTGGAAGTTGGAGATCCCAGATTAGTTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

514

Amino Acids

58.65

Weight (kDa)

8.67

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 98 - 411 1.8e-97 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 835
AatII GACGTC 1 cut(s) 1221
Acc36I ACCTGC 1 cut(s) 1426
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 2 cut(s) 275, 1011
AccI GTMKAC 1 cut(s) 1458
AciI CCGC 2 cut(s) 992, 1271
AclWI GGATC 1 cut(s) 1520
AcoI YGGCCR 2 cut(s) 48, 890
AcsI RAATTY 2 cut(s) 599, 1374
AcyI GRCGYC 3 cut(s) 217, 1012, 1218
AdeI CACNNNGTG 1 cut(s) 1189
AfaI GTAC 5 cut(s) 277, 323, 948, 1162, 1175
AfiI CCNNNNNNNGG 1 cut(s) 68
AflIII ACRYGT 1 cut(s) 387
AgsI TTSAA 9 cut(s) 32, 196, 203, 238, 410, 545, 793, 823, 1099
AjnI CCWGG 1 cut(s) 278
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 6 cut(s) 145, 199, 290, 725, 809, 1364
AluI AGCT 6 cut(s) 145, 199, 290, 725, 809, 1364
Alw21I GWGCWC 1 cut(s) 255
Alw26I GTCTC 2 cut(s) 66, 459
AlwI GGATC 1 cut(s) 1520
AoxI GGCC 4 cut(s) 48, 890, 896, 1318
ApeKI GCWGC 1 cut(s) 806
ApoI RAATTY 2 cut(s) 599, 1374
Asp700I GAANNNNTTC 1 cut(s) 599
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 3 cut(s) 745, 751, 1014
AspS9I GGNCC 2 cut(s) 223, 1088
AsuC2I CCSGG 1 cut(s) 1488
AsuHPI GGTGA 6 cut(s) 51, 260, 838, 1150, 1332, 1378
AsuII TTCGAA 1 cut(s) 812
AsuNHI GCTAGC 1 cut(s) 1277
AvaII GGWCC 2 cut(s) 223, 1088
AxyI CCTNAGG 1 cut(s) 1133
BaeI ACNNNNGTAYC 2 cut(s) 259, 292
BalI TGGCCA 1 cut(s) 50
BanI GGYRCC 2 cut(s) 275, 1011
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 793, 825
BauI CACGAG 1 cut(s) 641
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 1 cut(s) 255
BbvI GCAGC 1 cut(s) 818
BccI CCATC 6 cut(s) 178, 207, 314, 430, 930, 1261
BciT130I CCWGG 1 cut(s) 280
BciVI GTATCC 1 cut(s) 1412
BcnI CCSGG 1 cut(s) 1488
BcoDI GTCTC 2 cut(s) 66, 459
BfaI CTAG 3 cut(s) 657, 726, 1278
BfmI CTRYAG 1 cut(s) 1443
BfoI RGCGCY 1 cut(s) 1015
BfuAI ACCTGC 1 cut(s) 1426
BfuI GTATCC 1 cut(s) 1412
BisI GCNGC 1 cut(s) 807
BlpI GCTNAGC 1 cut(s) 918
BlsI GCNGC 1 cut(s) 808
BmcAI AGTACT 1 cut(s) 948
Bme1390I CCNGG 2 cut(s) 280, 1488
Bme18I GGWCC 2 cut(s) 223, 1088
BmgT120I GGNCC 2 cut(s) 223, 1088
BmiI GGNNCC 3 cut(s) 277, 1013, 1090
BmrFI CCNGG 2 cut(s) 280, 1488
BmrI ACTGGG 2 cut(s) 1086, 1217
BmsI GCATC 3 cut(s) 292, 664, 1264
BmtI GCTAGC 1 cut(s) 1281
BmuI ACTGGG 2 cut(s) 1086, 1217
BpiI GAAGAC 1 cut(s) 245
BplI GAGNNNNNCTC 2 cut(s) 916, 948
BpmI CTGGAG 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 141
Bpu1102I GCTNAGC 1 cut(s) 918
Bpu14I TTCGAA 1 cut(s) 812
BpuEI CTTGAG 3 cut(s) 506, 542, 991
BpuMI CCSGG 1 cut(s) 1488
BsaHI GRCGYC 3 cut(s) 217, 1012, 1218
BsaI GGTCTC 1 cut(s) 66
BsaJI CCNNGG 5 cut(s) 51, 208, 271, 893, 1311
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 3 cut(s) 70, 1092, 1223
Bse21I CCTNAGG 1 cut(s) 1133
Bse3DI GCAATG 3 cut(s) 708, 738, 1023
BseBI CCWGG 1 cut(s) 280
BseDI CCNNGG 5 cut(s) 51, 208, 271, 893, 1311
BseGI GGATG 3 cut(s) 218, 597, 1279
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMI GCAATG 3 cut(s) 708, 738, 1023
BseMII CTCAG 6 cut(s) 132, 491, 699, 909, 1124, 1257
BseNI ACTGG 3 cut(s) 70, 1092, 1223
BseRI GAGGAG 5 cut(s) 84, 126, 151, 811, 988
BseXI GCAGC 1 cut(s) 818
BseYI CCCAGC 1 cut(s) 564
BsgI GTGCAG 1 cut(s) 1454
BshFI GGCC 4 cut(s) 50, 892, 898, 1320
BshNI GGYRCC 2 cut(s) 275, 1011
BsiHKAI GWGCWC 1 cut(s) 255
BsiSI CCGG 1 cut(s) 1488
BslFI GGGAC 2 cut(s) 1074, 1205
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 2 cut(s) 66, 459
BsmFI GGGAC 2 cut(s) 1074, 1205
BsnI GGCC 4 cut(s) 50, 892, 898, 1320
Bso31I GGTCTC 1 cut(s) 66
Bsp119I TTCGAA 1 cut(s) 812
Bsp1286I GDGCHC 2 cut(s) 186, 255
Bsp143I GATC 3 cut(s) 831, 1210, 1525
Bsp1720I GCTNAGC 1 cut(s) 918
Bsp19I CCATGG 2 cut(s) 51, 1311
BspACI CCGC 2 cut(s) 992, 1271
BspANI GGCC 4 cut(s) 50, 892, 898, 1320
BspCNI CTCAG 6 cut(s) 133, 492, 698, 910, 1125, 1258
BspHI TCATGA 2 cut(s) 603, 670
BspLI GGNNCC 3 cut(s) 277, 1013, 1090
BspMAI CTGCAG 1 cut(s) 1447
BspMI ACCTGC 1 cut(s) 1426
BspOI GCTAGC 1 cut(s) 1281
BspPI GGATC 1 cut(s) 1520
BspT104I TTCGAA 1 cut(s) 812
BspT107I GGYRCC 2 cut(s) 275, 1011
BspTNI GGTCTC 1 cut(s) 66
BsrDI GCAATG 3 cut(s) 708, 738, 1023
BsrI ACTGG 3 cut(s) 70, 1092, 1223
BssECI CCNNGG 5 cut(s) 51, 208, 271, 893, 1311
BssMI GATC 3 cut(s) 831, 1210, 1525
BssNAI GTATAC 1 cut(s) 1459
BssNI GRCGYC 3 cut(s) 217, 1012, 1218
BssSI CACGAG 1 cut(s) 641
BssT1I CCWWGG 4 cut(s) 51, 271, 893, 1311
Bst1107I GTATAC 1 cut(s) 1459
Bst2BI CACGAG 1 cut(s) 641
Bst2UI CCWGG 1 cut(s) 280
Bst4CI ACNGT 2 cut(s) 611, 1126
Bst6I CTCTTC 2 cut(s) 278, 788
BstACI GRCGYC 3 cut(s) 217, 1012, 1218
BstBI TTCGAA 1 cut(s) 812
BstC8I GCNNGC 4 cut(s) 747, 753, 1279, 1318
BstDEI CTNAG 6 cut(s) 141, 500, 685, 918, 1133, 1266
BstDSI CCRYGG 3 cut(s) 51, 208, 1311
BstF5I GGATG 3 cut(s) 218, 597, 1279
BstH2I RGCGCY 1 cut(s) 1015
BstHHI GCGC 3 cut(s) 745, 751, 1014
BstKTI GATC 3 cut(s) 834, 1213, 1528
BstMAI GTCTC 2 cut(s) 66, 459
BstMBI GATC 3 cut(s) 831, 1210, 1525
BstMWI GCNNNNNNNGC 2 cut(s) 761, 1361
BstNI CCWGG 1 cut(s) 280
BstSCI CCNGG 2 cut(s) 278, 1486
BstSFI CTRYAG 1 cut(s) 1443
BstV1I GCAGC 1 cut(s) 818
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 1 cut(s) 1525
BstYI RGATCY 1 cut(s) 1525
BstZ17I GTATAC 1 cut(s) 1459
Bsu36I CCTNAGG 1 cut(s) 1133
BsuI GTATCC 1 cut(s) 1412
BsuRI GGCC 4 cut(s) 50, 892, 898, 1320
BtgI CCRYGG 3 cut(s) 51, 208, 1311
BtsCI GGATG 3 cut(s) 218, 597, 1279
BtsIMutI CAGTG 3 cut(s) 579, 616, 693
BveI ACCTGC 1 cut(s) 1426
Cac8I GCNNGC 4 cut(s) 747, 753, 1279, 1318
CciI TCATGA 2 cut(s) 603, 670
CfoI GCGC 3 cut(s) 745, 751, 1014
Cfr13I GGNCC 2 cut(s) 223, 1088
CseI GACGC 1 cut(s) 206
Csp6I GTAC 5 cut(s) 276, 322, 947, 1161, 1174
CviAII CATG 7 cut(s) 25, 52, 319, 604, 629, 671, 1312
CviQI GTAC 5 cut(s) 276, 322, 947, 1161, 1174
DdeI CTNAG 6 cut(s) 141, 500, 685, 918, 1133, 1266
DinI GGCGCC 1 cut(s) 1013
DpnI GATC 3 cut(s) 833, 1212, 1527
DpnII GATC 3 cut(s) 831, 1210, 1525
DraIII CACNNNGTG 1 cut(s) 1189
DrdI GACNNNNNNGTC 1 cut(s) 835
DseDI GACNNNNNNGTC 1 cut(s) 835
EaeI YGGCCR 2 cut(s) 48, 890
Eam1104I CTCTTC 2 cut(s) 278, 788
EarI CTCTTC 2 cut(s) 278, 788
EciI GGCGGA 1 cut(s) 1286
Eco130I CCWWGG 4 cut(s) 51, 271, 893, 1311
Eco147I AGGCCT 1 cut(s) 1320
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 66
Eco47I GGWCC 2 cut(s) 223, 1088
Eco81I CCTNAGG 1 cut(s) 1133
EcoRI GAATTC 1 cut(s) 599
EcoRII CCWGG 1 cut(s) 278
EcoT14I CCWWGG 4 cut(s) 51, 271, 893, 1311
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 1013
EheI GGCGCC 1 cut(s) 1013
ErhI CCWWGG 4 cut(s) 51, 271, 893, 1311
FaeI CATG 7 cut(s) 28, 55, 322, 607, 632, 674, 1315
FaqI GGGAC 2 cut(s) 1074, 1205
FatI CATG 7 cut(s) 24, 51, 318, 603, 628, 670, 1311
FauI CCCGC 1 cut(s) 985
FblI GTMKAC 1 cut(s) 1458
Fnu4HI GCNGC 1 cut(s) 807
FokI GGATG 3 cut(s) 225, 604, 1286
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 1 cut(s) 807
FspBI CTAG 3 cut(s) 657, 726, 1278
GlaI GCGC 3 cut(s) 744, 750, 1013
GluI GCNGC 1 cut(s) 807
GsaI CCCAGC 1 cut(s) 568
GsuI CTGGAG 1 cut(s) 87
HaeII RGCGCY 1 cut(s) 1015
HaeIII GGCC 4 cut(s) 50, 892, 898, 1320
HapII CCGG 1 cut(s) 1488
HgaI GACGC 1 cut(s) 206
HhaI GCGC 3 cut(s) 745, 751, 1014
Hin1I GRCGYC 3 cut(s) 217, 1012, 1218
Hin1II CATG 7 cut(s) 28, 55, 322, 607, 632, 674, 1315
Hin6I GCGC 3 cut(s) 743, 749, 1012
HinP1I GCGC 3 cut(s) 743, 749, 1012
HindIII AAGCTT 1 cut(s) 197
HinfI GANTC 8 cut(s) 12, 294, 467, 733, 986, 1307, 1472, 1491
HpaII CCGG 1 cut(s) 1488
HphI GGTGA 6 cut(s) 51, 260, 838, 1150, 1332, 1378
Hpy166II GTNNAC 2 cut(s) 691, 1459
Hpy188I TCNGA 4 cut(s) 84, 332, 911, 1267
Hpy188III TCNNGA 7 cut(s) 140, 221, 485, 604, 671, 881, 1214
Hpy8I GTNNAC 2 cut(s) 691, 1459
HpyAV CCTTC 9 cut(s) 528, 589, 817, 992, 1060, 1297, 1411, 1443, 1457
HpyCH4III ACNGT 2 cut(s) 611, 1126
HpyCH4IV ACGT 3 cut(s) 389, 1176, 1218
HpyCH4V TGCA 8 cut(s) 4, 37, 713, 764, 806, 1198, 1435, 1445
HpyF10VI GCNNNNNNNGC 2 cut(s) 761, 1361
HpyF3I CTNAG 6 cut(s) 141, 500, 685, 918, 1133, 1266
HpySE526I ACGT 3 cut(s) 389, 1176, 1218
Hsp92I GRCGYC 3 cut(s) 217, 1012, 1218
Hsp92II CATG 7 cut(s) 28, 55, 322, 607, 632, 674, 1315
HspAI GCGC 3 cut(s) 743, 749, 1012
KasI GGCGCC 1 cut(s) 1011
KpnI GGTACC 1 cut(s) 279
Kzo9I GATC 3 cut(s) 831, 1210, 1525
LmnI GCTCC 3 cut(s) 250, 625, 975
Lsp1109I GCAGC 1 cut(s) 818
LweI GCATC 3 cut(s) 292, 664, 1264
MaeI CTAG 3 cut(s) 657, 726, 1278
MaeII ACGT 3 cut(s) 389, 1176, 1218
MaeIII GTNAC 6 cut(s) 377, 680, 826, 1205, 1338, 1384
MalI GATC 3 cut(s) 833, 1212, 1527
MboI GATC 3 cut(s) 831, 1210, 1525
MboII GAAGA 7 cut(s) 53, 250, 295, 349, 440, 805, 1436
MflI RGATCY 1 cut(s) 1525
MhlI GDGCHC 2 cut(s) 186, 255
MlsI TGGCCA 1 cut(s) 50
MluCI AATT 9 cut(s) 153, 191, 313, 599, 714, 1036, 1109, 1199, 1374
MluNI TGGCCA 1 cut(s) 50
Mly113I GGCGCC 1 cut(s) 1012
MlyI GAGTC 1 cut(s) 461
MmeI TCCRAC 3 cut(s) 943, 1132, 1501
Mox20I TGGCCA 1 cut(s) 50
MroXI GAANNNNTTC 1 cut(s) 599
MscI TGGCCA 1 cut(s) 50
MseI TTAA 5 cut(s) 156, 263, 312, 1292, 1543
Msp20I TGGCCA 1 cut(s) 50
MspI CCGG 1 cut(s) 1488
MspR9I CCNGG 2 cut(s) 280, 1488
MvaI CCWGG 1 cut(s) 280
MwoI GCNNNNNNNGC 2 cut(s) 761, 1361
NarI GGCGCC 1 cut(s) 1012
NciI CCSGG 1 cut(s) 1488
NcoI CCATGG 2 cut(s) 51, 1311
NdeII GATC 3 cut(s) 831, 1210, 1525
NheI GCTAGC 1 cut(s) 1277
NlaIII CATG 7 cut(s) 28, 55, 322, 607, 632, 674, 1315
NlaIV GGNNCC 3 cut(s) 277, 1013, 1090
NmeAIII GCCGAG 1 cut(s) 948
NmuCI GTSAC 4 cut(s) 377, 826, 1338, 1384
NspV TTCGAA 1 cut(s) 812
PagI TCATGA 2 cut(s) 603, 670
PceI AGGCCT 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 1215
PdmI GAANNNNTTC 1 cut(s) 599
PfeI GAWTC 7 cut(s) 12, 294, 733, 986, 1307, 1472, 1491
PfoI TCCNGGA 1 cut(s) 1486
PkrI GCNGC 1 cut(s) 808
PleI GAGTC 1 cut(s) 461
PluTI GGCGCC 1 cut(s) 1015
PpsI GAGTC 1 cut(s) 461
Psp6I CCWGG 1 cut(s) 278
PspFI CCCAGC 1 cut(s) 564
PspGI CCWGG 1 cut(s) 278
PspN4I GGNNCC 3 cut(s) 277, 1013, 1090
PspPI GGNCC 2 cut(s) 223, 1088
PstI CTGCAG 1 cut(s) 1447
PsuI RGATCY 1 cut(s) 1525
RsaI GTAC 5 cut(s) 277, 323, 948, 1162, 1175
RsaNI GTAC 5 cut(s) 276, 322, 947, 1161, 1174
SaqAI TTAA 5 cut(s) 156, 263, 312, 1292, 1543
SatI GCNGC 1 cut(s) 807
Sau3AI GATC 3 cut(s) 831, 1210, 1525
Sau96I GGNCC 2 cut(s) 223, 1088
ScaI AGTACT 1 cut(s) 948
SchI GAGTC 1 cut(s) 461
ScrFI CCNGG 2 cut(s) 280, 1488
SduI GDGCHC 2 cut(s) 186, 255
SfaNI GCATC 3 cut(s) 292, 664, 1264
SfcI CTRYAG 1 cut(s) 1443
SfoI GGCGCC 1 cut(s) 1013
SfuI TTCGAA 1 cut(s) 812
SinI GGWCC 2 cut(s) 223, 1088
SmlI CTYRAG 3 cut(s) 485, 521, 970
SmoI CTYRAG 3 cut(s) 485, 521, 970
Sse9I AATT 9 cut(s) 153, 191, 313, 599, 714, 1036, 1109, 1199, 1374
SseBI AGGCCT 1 cut(s) 1320
SsiI CCGC 2 cut(s) 992, 1271
SspDI GGCGCC 1 cut(s) 1011
SspMI CTAG 3 cut(s) 657, 726, 1278
StuI AGGCCT 1 cut(s) 1320
StyD4I CCNGG 2 cut(s) 278, 1486
StyI CCWWGG 4 cut(s) 51, 271, 893, 1311
TaaI ACNGT 2 cut(s) 611, 1126
TaiI ACGT 3 cut(s) 392, 1179, 1221
TaqI TCGA 3 cut(s) 812, 934, 1256
TasI AATT 9 cut(s) 153, 191, 313, 599, 714, 1036, 1109, 1199, 1374
TatI WGTACW 1 cut(s) 946
TfiI GAWTC 7 cut(s) 12, 294, 733, 986, 1307, 1472, 1491
Tru1I TTAA 5 cut(s) 156, 263, 312, 1292, 1543
Tru9I TTAA 5 cut(s) 156, 263, 312, 1292, 1543
TscAI CASTG 3 cut(s) 586, 616, 693
TseFI GTSAC 4 cut(s) 377, 826, 1338, 1384
TseI GCWGC 1 cut(s) 806
Tsp45I GTSAC 4 cut(s) 377, 826, 1338, 1384
TspDTI ATGAA 8 cut(s) 144, 382, 592, 608, 620, 659, 1122, 1386
TspGWI ACGGA 1 cut(s) 197
TspRI CASTG 3 cut(s) 586, 616, 693
VpaK11BI GGWCC 2 cut(s) 223, 1088
XapI RAATTY 2 cut(s) 599, 1374
XcmI CCANNNNNNNNNTGG 1 cut(s) 1057
XmiI GTMKAC 1 cut(s) 1458
XmnI GAANNNNTTC 1 cut(s) 599
XspI CTAG 3 cut(s) 657, 726, 1278
ZraI GACGTC 1 cut(s) 1219
ZrmI AGTACT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.