Rh5AG261900

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000264
Physical Location & Seq
Forward (+)
34261575 .. 34264349
2775 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG261900.1

Sequence Viewer

Length: 1896 bp
ATGGACCGTCCACCGGACACCATGGTTGAAGAGAAAGAAGAGCTCATGGTTTCACCAACTGGTGGAGACCCATTTCACAAAATAGCCCATTTTCTGAAACCGATAGTGCCTTCCTCTGTTTTTAAGTTCCCTAATGAATCTTTCTCCTCCCTCCCTTCACATTTTGGGCCAAGAGAATGCCCTTTAGAGGTAGAATTCCCTGGGTGGAGAATTCAGCTTCAAGAAGATTGGACTGCTTGGGTTGACCGATTGGCTTCACTTCACCAATCCACATGGAAGAAAGCTGGTATATATGAAGCAATCTTCAACTCGACGTACCAAATTAGAAGAAACACCGAGTTGATATATGGGTTGGCAGAGAAATGGTGTTCTGAAACTAATAGTTTCATTTTTGCATGGGGTGAAGCAACAATTACATTAGAGGATTTGATGGTGATGGGTGGCTATTCCGTTCTTGGAGAGTCGATTTTCAACCTTCTTGAAAACAGAGTGCTCAAGGAAATAGAAGAGAAACTTAATGAAGTGATAACAGAAATAAACAGGGGTGCGTCGCGCAGACCTTCCGCTAGCTTATGGTTGAAGAAGTTCAAAAACAATGGCAGTGAATTGGAGCATGAAGCATTTCTTGTGATGTGGTTGTGCAGGTATGTTTTTCCGGGTACTTATAATACAATACAAAAGGGTGTCTTTTCCATTGCAATTCATTTAGCTAGGGGCACCCGAATTGCACTTGCACCCGCTGTTCTTGCTAGTATTTATAAAGACTTGAGTTTATTGAATTCAGCAATTGTGGATTCAAGAAAGTTAGAGACAGGTTGTGATGGTGCTATGAAAGTCAGCATCAAGTCACCATTTCAATTTATTCAGCTTTGGGCGTGGGAAAGATTTGTAGAGCTAAGTCCTATCCCCGGAGGGATCAATCTTGGGCAGCCAAGATTGGCTCGATGGGACAAAGTAAATGGTGTGGAATTTGAAAACTTGAGGAGGGTTTTAGACTCCGCCGGAGATGGTTTCAAGTGGCGTCCTTATGCCTTGACCATTGAAAACGGGCAGTTGCCTAAATACTATCCTGAAGAGGAAATGCATGTGTCAGATTGTTCAGGTTTGGATGATGAGTTGCATTCATTTTTCAGATGCTTGAGGGCCAGTGAGCTGTCTGGATTTGGTACTATTGAGCAGTACCTTCCGCATAGAGTAGCAATGCAGTTTGGATTTGATCAAGACATTCCATGTGTTGTCGCTCGATCCAATCAGAGTTCTGATATAGCTTGGAATCATTACATCAAGAAATTTGGGAATGCAAGTTTATATGTTCCATCCAGGTTTTTGAAGGCATATATAAGCACAAGATACTTGAAGTGGTGGAAGGAATCAATGTTGGGTCTCAAAAAGACTATCACTCCAAAATTAAAGAAATCAAAGTGTATAGGAGGATCACAAATGAGGGCTAAACCAGCCCCTGTACATCCTGGTTCTGCCCCCAAGAAAGCTGTAGAAGGATCTAAGAAACGGAAGAAGAATCACGATTTCATCCTTCCTTCTGTTTCTTATCCAAAGTATTCCGAAAAATTGGAGCTGCTTTCAAAAGGAAGGAATGAAGGTAATGATTCCCTTGTTCCTCCAGGATTTCCTTGCAAATGTAGTAGAATGGAAGCTGAAGGTTCAATGGATGAAGATGGACTAACTTTATCAGAACTTATGAAATATTGCAATAAATTCAAAAATGTTAATACAAGAACATGTGGTGACAATGAAAATTTTCCATGTCAAGTTCAAAATCTGGCACCTTCAAGTTCTGTTCATACTATGAAGTCAGAAAGCAAATTATTCTGGGAACAAGCTAGAGCAAAAGCTTATGAAACAAGCCCCGCTCTGATATGGGAAAATGGAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

631

Amino Acids

71.58

Weight (kDa)

8.49

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 96 - 456 3.4e-107 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 666, 759
Acc36I ACCTGC 1 cut(s) 633
AccB1I GGYRCC 2 cut(s) 716, 1783
AccB7I CCANNNNNTGG 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 1871
AccII CGCG 1 cut(s) 553
AciI CCGC 5 cut(s) 564, 738, 999, 1187, 1869
AclWI GGATC 4 cut(s) 923, 1239, 1441, 1507
AcsI RAATTY 7 cut(s) 194, 210, 778, 968, 1289, 1715, 1756
AcuI CTGAAG 2 cut(s) 1092, 1677
AcyI GRCGYC 1 cut(s) 1021
AfaI GTAC 5 cut(s) 317, 661, 1168, 1181, 1464
AfiI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
AflIII ACRYGT 1 cut(s) 1739
AjnI CCWGG 4 cut(s) 199, 1319, 1468, 1621
Alw21I GWGCWC 2 cut(s) 45, 495
Alw26I GTCTC 3 cut(s) 60, 803, 1388
AlwI GGATC 4 cut(s) 923, 1239, 1441, 1507
AlwNI CAGNNNCTG 1 cut(s) 1460
AoxI GGCC 2 cut(s) 167, 1143
ApeKI GCWGC 2 cut(s) 928, 1576
ApoI RAATTY 7 cut(s) 194, 210, 778, 968, 1289, 1715, 1756
Asp700I GAANNNNTTC 3 cut(s) 584, 621, 1758
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 3 cut(s) 4, 167, 1143
AsuC2I CCSGG 2 cut(s) 657, 909
AsuHPI GGTGA 6 cut(s) 45, 254, 413, 445, 840, 1757
AsuNHI GCTAGC 1 cut(s) 566
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 1 cut(s) 719
BanI GGYRCC 2 cut(s) 716, 1783
BanII GRGCYC 1 cut(s) 45
Bbv12I GWGCWC 2 cut(s) 45, 495
BbvI GCAGC 2 cut(s) 940, 1563
BccI CCATC 7 cut(s) 424, 430, 815, 939, 1001, 1324, 1670
BciT130I CCWGG 4 cut(s) 201, 1321, 1470, 1623
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 2 cut(s) 657, 909
BcoDI GTCTC 3 cut(s) 60, 803, 1388
BfaI CTAG 4 cut(s) 567, 711, 750, 1842
BfmI CTRYAG 1 cut(s) 1491
BfuAI ACCTGC 1 cut(s) 633
BisI GCNGC 2 cut(s) 929, 1577
BlsI GCNGC 2 cut(s) 930, 1578
Bme1390I CCNGG 6 cut(s) 201, 657, 909, 1321, 1470, 1623
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 3 cut(s) 4, 167, 1143
BmiI GGNNCC 2 cut(s) 718, 1785
BmrFI CCNGG 6 cut(s) 201, 657, 909, 1321, 1470, 1623
BmsI GCATC 2 cut(s) 849, 1124
BmtI GCTAGC 1 cut(s) 570
BpmI CTGGAG 1 cut(s) 1605
BpuEI CTTGAG 4 cut(s) 479, 787, 1000, 1159
BpuMI CCSGG 2 cut(s) 657, 909
BsaHI GRCGYC 1 cut(s) 1021
BsaI GGTCTC 2 cut(s) 60, 1388
BsaJI CCNNGG 4 cut(s) 21, 199, 200, 907
BsaWI WCCGGW 1 cut(s) 13
BsaXI ACNNNNNCTCC 2 cut(s) 1384, 1414
Bsc4I CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
Bse1I ACTGG 2 cut(s) 64, 1146
Bse3DI GCAATG 2 cut(s) 693, 1206
BseBI CCWGG 4 cut(s) 201, 1321, 1470, 1623
BseDI CCNNGG 4 cut(s) 21, 199, 200, 907
BseGI GGATG 5 cut(s) 1114, 1316, 1465, 1530, 1675
BseLI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
BseMI GCAATG 2 cut(s) 693, 1206
BseNI ACTGG 2 cut(s) 64, 1146
BseRI GAGGAG 2 cut(s) 136, 997
BseSI GKGCMC 1 cut(s) 719
BseXI GCAGC 2 cut(s) 940, 1563
BsgI GTGCAG 1 cut(s) 661
Bsh1236I CGCG 1 cut(s) 553
BshFI GGCC 2 cut(s) 169, 1145
BshNI GGYRCC 2 cut(s) 716, 1783
BsiHKAI GWGCWC 2 cut(s) 45, 495
BsiSI CCGG 4 cut(s) 14, 656, 909, 1002
BslFI GGGAC 1 cut(s) 962
BslI CCNNNNNNNGG 4 cut(s) 13, 62, 187, 908
BsmAI GTCTC 3 cut(s) 60, 803, 1388
BsmFI GGGAC 1 cut(s) 962
BsmI GAATGC 3 cut(s) 182, 1120, 1303
BsnI GGCC 2 cut(s) 169, 1145
Bso31I GGTCTC 2 cut(s) 60, 1388
Bsp1286I GDGCHC 3 cut(s) 45, 495, 719
Bsp1407I TGTACA 1 cut(s) 1462
Bsp143I GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 5 cut(s) 564, 738, 999, 1187, 1869
BspANI GGCC 2 cut(s) 169, 1145
BspFNI CGCG 1 cut(s) 553
BspLI GGNNCC 2 cut(s) 718, 1785
BspMI ACCTGC 1 cut(s) 633
BspOI GCTAGC 1 cut(s) 570
BspPI GGATC 4 cut(s) 923, 1239, 1441, 1507
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 2 cut(s) 716, 1783
BspTNI GGTCTC 2 cut(s) 60, 1388
BsrBI CCGCTC 1 cut(s) 1871
BsrDI GCAATG 2 cut(s) 693, 1206
BsrGI TGTACA 1 cut(s) 1462
BsrI ACTGG 2 cut(s) 64, 1146
BssECI CCNNGG 4 cut(s) 21, 199, 200, 907
BssMI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
BssNI GRCGYC 1 cut(s) 1021
BssT1I CCWWGG 1 cut(s) 21
Bst2UI CCWGG 4 cut(s) 201, 1321, 1470, 1623
Bst4CI ACNGT 1 cut(s) 8
Bst6I CTCTTC 4 cut(s) 24, 33, 501, 1068
BstACI GRCGYC 1 cut(s) 1021
BstAUI TGTACA 1 cut(s) 1462
BstC8I GCNNGC 1 cut(s) 568
BstDEI CTNAG 2 cut(s) 896, 1503
BstDSI CCRYGG 1 cut(s) 21
BstF5I GGATG 5 cut(s) 1114, 1316, 1465, 1530, 1675
BstFNI CGCG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 555
BstKTI GATC 5 cut(s) 918, 1219, 1247, 1436, 1502
BstMAI GTCTC 3 cut(s) 60, 803, 1388
BstMBI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
BstMWI GCNNNNNNNGC 2 cut(s) 746, 1454
BstNI CCWGG 4 cut(s) 201, 1321, 1470, 1623
BstNSI RCATGY 2 cut(s) 1088, 1743
BstSCI CCNGG 6 cut(s) 199, 655, 907, 1319, 1468, 1621
BstSFI CTRYAG 1 cut(s) 1491
BstSLI GKGCMC 1 cut(s) 719
BstUI CGCG 1 cut(s) 553
BstV1I GCAGC 2 cut(s) 940, 1563
BstX2I RGATCY 1 cut(s) 1499
BstYI RGATCY 1 cut(s) 1499
BsuRI GGCC 2 cut(s) 169, 1145
BtgI CCRYGG 1 cut(s) 21
BtsCI GGATG 5 cut(s) 1114, 1316, 1465, 1530, 1675
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 2 cut(s) 607, 1153
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 1 cut(s) 568
CaiI CAGNNNCTG 1 cut(s) 1460
CfoI GCGC 1 cut(s) 555
Cfr13I GGNCC 3 cut(s) 4, 167, 1143
CseI GACGC 2 cut(s) 537, 1010
Csp6I GTAC 5 cut(s) 316, 660, 1167, 1180, 1463
CviAII CATG 9 cut(s) 22, 46, 273, 396, 614, 1085, 1230, 1740, 1764
CviQI GTAC 5 cut(s) 316, 660, 1167, 1180, 1463
DdeI CTNAG 2 cut(s) 896, 1503
DpnI GATC 5 cut(s) 917, 1218, 1246, 1435, 1501
DpnII GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
Eam1104I CTCTTC 4 cut(s) 24, 33, 501, 1068
EarI CTCTTC 4 cut(s) 24, 33, 501, 1068
EciI GGCGGA 1 cut(s) 988
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 45
Eco31I GGTCTC 2 cut(s) 60, 1388
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 43
Eco57I CTGAAG 2 cut(s) 1092, 1677
EcoICRI GAGCTC 1 cut(s) 43
EcoRI GAATTC 3 cut(s) 194, 210, 778
EcoRII CCWGG 4 cut(s) 199, 1319, 1468, 1621
EcoT14I CCWWGG 1 cut(s) 21
EcoT22I ATGCAT 1 cut(s) 1086
EcoT38I GRGCYC 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 21
FaeI CATG 9 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1743, 1767
FalI AAGNNNNNCTT 6 cut(s) 498, 530, 609, 641, 671, 703
FaqI GGGAC 1 cut(s) 962
FatI CATG 9 cut(s) 21, 45, 272, 395, 613, 1084, 1229, 1739, 1763
FauI CCCGC 2 cut(s) 745, 1876
FbaI TGATCA 1 cut(s) 1216
Fnu4HI GCNGC 2 cut(s) 929, 1577
FokI GGATG 5 cut(s) 1121, 1303, 1452, 1517, 1682
FriOI GRGCYC 1 cut(s) 45
Fsp4HI GCNGC 2 cut(s) 929, 1577
FspBI CTAG 4 cut(s) 567, 711, 750, 1842
GlaI GCGC 1 cut(s) 554
GluI GCNGC 2 cut(s) 929, 1577
GsuI CTGGAG 1 cut(s) 1605
HaeIII GGCC 2 cut(s) 169, 1145
HapII CCGG 4 cut(s) 14, 656, 909, 1002
HgaI GACGC 2 cut(s) 537, 1010
HhaI GCGC 1 cut(s) 555
Hin1I GRCGYC 1 cut(s) 1021
Hin1II CATG 9 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1743, 1767
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 1851
HinfI GANTC 8 cut(s) 137, 461, 794, 995, 1273, 1370, 1519, 1607
HpaII CCGG 4 cut(s) 14, 656, 909, 1002
HphI GGTGA 6 cut(s) 45, 254, 413, 445, 840, 1757
Hpy166II GTNNAC 2 cut(s) 11, 244
Hpy188III TCNNGA 8 cut(s) 221, 479, 798, 1070, 1158, 1220, 1285, 1523
Hpy8I GTNNAC 2 cut(s) 11, 244
Hpy99I CGWCG 2 cut(s) 316, 553
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4IV ACGT 1 cut(s) 314
HpyF10VI GCNNNNNNNGC 2 cut(s) 746, 1454
HpyF3I CTNAG 2 cut(s) 896, 1503
HpySE526I ACGT 1 cut(s) 314
Hsp92I GRCGYC 1 cut(s) 1021
Hsp92II CATG 9 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1743, 1767
HspAI GCGC 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 2 cut(s) 610, 1573
Lsp1109I GCAGC 2 cut(s) 940, 1563
LweI GCATC 2 cut(s) 849, 1124
MaeI CTAG 4 cut(s) 567, 711, 750, 1842
MaeII ACGT 1 cut(s) 314
MaeIII GTNAC 2 cut(s) 846, 1745
MalI GATC 5 cut(s) 917, 1218, 1246, 1435, 1501
MbiI CCGCTC 1 cut(s) 1871
MboI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 1 cut(s) 1499
MhlI GDGCHC 3 cut(s) 45, 495, 719
MlyI GAGTC 2 cut(s) 470, 989
Mph1103I ATGCAT 1 cut(s) 1086
MroXI GAANNNNTTC 3 cut(s) 584, 621, 1758
MseI TTAA 4 cut(s) 123, 516, 1409, 1728
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 4 cut(s) 14, 656, 909, 1002
MspR9I CCNGG 6 cut(s) 201, 657, 909, 1321, 1470, 1623
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 3 cut(s) 182, 1120, 1303
MvaI CCWGG 4 cut(s) 201, 1321, 1470, 1623
MvnI CGCG 1 cut(s) 553
MwoI GCNNNNNNNGC 2 cut(s) 746, 1454
NciI CCSGG 2 cut(s) 657, 909
NcoI CCATGG 1 cut(s) 21
NdeII GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
NheI GCTAGC 1 cut(s) 566
NlaIII CATG 9 cut(s) 25, 49, 276, 399, 617, 1088, 1233, 1743, 1767
NlaIV GGNNCC 2 cut(s) 718, 1785
NmuCI GTSAC 2 cut(s) 846, 1745
NsiI ATGCAT 1 cut(s) 1086
NspI RCATGY 2 cut(s) 1088, 1743
PasI CCCWGGG 1 cut(s) 200
PciI ACATGT 1 cut(s) 1739
PciSI GCTCTTC 1 cut(s) 33
PctI GAATGC 3 cut(s) 182, 1120, 1303
PdmI GAANNNNTTC 3 cut(s) 584, 621, 1758
PfeI GAWTC 6 cut(s) 137, 794, 1273, 1370, 1519, 1607
PflMI CCANNNNNTGG 1 cut(s) 62
PfoI TCCNGGA 1 cut(s) 1621
PkrI GCNGC 2 cut(s) 930, 1578
PleI GAGTC 2 cut(s) 469, 989
PpsI GAGTC 2 cut(s) 469, 989
PscI ACATGT 1 cut(s) 1739
PsiI TTATAA 2 cut(s) 666, 759
Psp124BI GAGCTC 1 cut(s) 45
Psp6I CCWGG 4 cut(s) 199, 1319, 1468, 1621
PspGI CCWGG 4 cut(s) 199, 1319, 1468, 1621
PspN4I GGNNCC 2 cut(s) 718, 1785
PspPI GGNCC 3 cut(s) 4, 167, 1143
PstNI CAGNNNCTG 1 cut(s) 1460
PsuI RGATCY 1 cut(s) 1499
RsaI GTAC 5 cut(s) 317, 661, 1168, 1181, 1464
RsaNI GTAC 5 cut(s) 316, 660, 1167, 1180, 1463
SacI GAGCTC 1 cut(s) 45
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 4 cut(s) 123, 516, 1409, 1728
SatI GCNGC 2 cut(s) 929, 1577
Sau3AI GATC 5 cut(s) 915, 1216, 1244, 1433, 1499
Sau96I GGNCC 3 cut(s) 4, 167, 1143
SchI GAGTC 2 cut(s) 470, 989
ScrFI CCNGG 6 cut(s) 201, 657, 909, 1321, 1470, 1623
SduI GDGCHC 3 cut(s) 45, 495, 719
SfaNI GCATC 2 cut(s) 849, 1124
SfcI CTRYAG 1 cut(s) 1491
SinI GGWCC 1 cut(s) 4
SmlI CTYRAG 4 cut(s) 494, 766, 979, 1138
SmoI CTYRAG 4 cut(s) 494, 766, 979, 1138
SsiI CCGC 5 cut(s) 564, 738, 999, 1187, 1869
SspI AATATT 1 cut(s) 1706
SspMI CTAG 4 cut(s) 567, 711, 750, 1842
SstI GAGCTC 1 cut(s) 45
StyD4I CCNGG 6 cut(s) 199, 655, 907, 1319, 1468, 1621
StyI CCWWGG 1 cut(s) 21
TaaI ACNGT 1 cut(s) 8
TaiI ACGT 1 cut(s) 317
TaqI TCGA 4 cut(s) 311, 464, 943, 1243
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 1 cut(s) 1462
TfiI GAWTC 6 cut(s) 137, 794, 1273, 1370, 1519, 1607
Tru1I TTAA 4 cut(s) 123, 516, 1409, 1728
Tru9I TTAA 4 cut(s) 123, 516, 1409, 1728
TscAI CASTG 2 cut(s) 607, 1153
TseFI GTSAC 2 cut(s) 846, 1745
TseI GCWGC 2 cut(s) 928, 1576
Tsp45I GTSAC 2 cut(s) 846, 1745
TspGWI ACGGA 2 cut(s) 439, 1525
TspRI CASTG 2 cut(s) 607, 1153
Van91I CCANNNNNTGG 1 cut(s) 62
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 7 cut(s) 194, 210, 778, 968, 1289, 1715, 1756
XceI RCATGY 2 cut(s) 1088, 1743
XmnI GAANNNNTTC 3 cut(s) 584, 621, 1758
XspI CTAG 4 cut(s) 567, 711, 750, 1842
Zsp2I ATGCAT 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.