Rh5BG264500

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000264
Physical Location & Seq
Forward (+)
33118579 .. 33121044
2466 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG264500.1

Sequence Viewer

Length: 2061 bp
ATGCAGGACAGAATCACAGACACCATGATTGAAGCGCAAGAAAATGAGGCCATGGTTTCACCAACTGGAGGAGACCCATTTCGGAAAAGAGCCTACTTTCTCAAACCCATTGTTGCTTCCTCCATTGATGAACCTCCTCCTGAGCTTTCCCAGTGTTTTAGCTCCCTCCCATCAGGTTTTGAGCCCAAGAAATTGGTTCTTGAAATCCGTGGATGGCGTTTGGACCACAAAGATTTGAAGACTTGGGTGGAGCACTTGGCTTTAACTCACCAAGGTACATGGAGGAGAGCTGGAATCTATGATGCCATCTTCAATTCCATGTGCGAAATCCGGAGGAAGAATGATTTGGTTCGTGGGCTTGGCGAGAAATGGTGCTGTGACACCAACACGTTCATTTTTGATTGGGGTGAAGCAACTATTTCTTTGGAAGATGTGATGGTGTTGGGAGGGTTTTCTGTTTTGGGAGACTCTGTTTTCAGTCCTCTTGAAAGCAGAGAACTAAGAGAAGTGGAGGATAGACTTGAGGAAGCGCGGAAGGGATTTCAAAATAAAAGAGGTGATCAAGGCTGGGGAGTTGCCTACACTGATTTGTGGATGAAGGAATTCATGAAAGGTGGGAGTGATTTGGAGCATGAGGCATTTCTTGTGTTCTGGTTGTCTAGGTATGTTTTTCATGGTGCTCGTAATTCAGTGAACAAGGCTGTGTTTTCCATTGCAATTCGTTTAGCTAGAGGGACTCGGATTGCGCTTGCGCCTGCTGTTCTTGCAAACATTTATAGAGATTTGGGTATGTTGAAGAGGAGTATTGCAGCTTCGAATGAGTTGAAAGTGACGATCAAGTCGCCATTCCATTTGGTTCAGGTTTGGGCTTGGGAGAGATTTCTGGAACTTCGGCCAAGGCCAAATGGTATCAGAAATGCTGAGCCGAGATTGGCTCGATGGGATAAAGTACTTGGTCTAAATATTGTTGGAAACTTGAGGAGAGTTTTGGATTCGGCGGGAGAAGGTTTCTTGTGGCGCCCTTATGCCATTGCCATTGAGAACTGGAAACTTCCCAAGTATTTTGTGGAGAAGGAGAAGTGGGTAGTGGTTGGTCCCAGTTTGAATGAAGATGAATTGCTGTCATTTTCGATATGCCTGAGGGTGAATGAGTTGGTTGGATTTGGTACTAAACAGCAGTACCTTCCGCACCGAGTGGCTATGCAATTTGGTTACGATCAGGACATCCCAGGTTTTGTTGCTCCATTGATTCAGAATACTAATATGACCTGGAAGCAGTACTTGAAAGAACTTGAGTATGTAATATTGTATATACCATCGAGGCTTTCTGAGGCGGATGCTAGCACAAGATACTTAAAGTGGTGGAAGGAATCCATGACAGGCCTCAAACACAGAAGTATGTCACCAGAAAAGAAAGCAAGGGAAGCTGTCAATGAGATATATGATGTCAGCATTCCTTGTATCCGTTCTCCAAAGAAGGCAGAAGTACTCGTGCAGGTTTCTGCAGGAAGGAATGTATACGAAGGTAATGATTCCCGTGTGCCTCCCGGATTCCCTCCAAAAAGGTATAGGCTGGAAGTTGGAGATCCTATGGATGATGATGACCTACCTATATCAGAGGCTTTGAAAATTAGGAAGAAGCATAAAACTGTTGAAACTAGAAAAGGTAGCGACGGTGAGAAGTTATCAGCTGATCATGATCAAATCTTGGCATCTTCAATTGCAGATGAATATTCTGTTAATACTATGACATCAGAAATATTTGAGAATGACATTACATTGGGTAAAGTTGTGACTTGGGGTGATAAGGGTAAGAGGAAGCTGAGAAAGGTAAGCATCATTATTGGCAATGAATGTCCTAGTAGCACCTCTCCAGTTGAGGAACAGGAATGTGCTAGCCTCAGCTCTTCATTTGAGAGACCGGAATACGCTTGCAGCAGGTCTGTATTTGAGAAACCAGAATATGCTAGCAGCAGTTCATTTGAAAAACGGGTGTCACAACTTAAATCTAAGGTTACAATGCTTGAAAAGATAGTTGAGGTGTTAAAATCTAGGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

686

Amino Acids

78.26

Weight (kDa)

8.34

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 98 - 456 6.2e-106 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48145 AT1G50745
fragaria_vesca FvH4_3g22280 FvH4_3g22281 FvH4_3g22290 FvH4_3g22300 FvH4_3g22321 FvH4_3g22330 FvH4_3g22330 FvH4_3g22331
rosa_chinensis RchiOBHm_Chr5g0038351 RchiOBHm_Chr5g0038361 RchiOBHm_Chr5g0038371 RchiOBHm_Chr5g0038381 RchiOBHm_Chr5g0038421 RchiOBHm_Chr5g0038451 RchiOBHm_Chr5g0038471 RchiOBHm_Chr5g0038491 RchiOBHm_Chr5g0038561 RchiOBHm_Chr5g0038731 RchiOBHm_Chr5g0038741 RchiOBHm_Chr5g0038771 RchiOBHm_Chr5g0038781 RchiOBHm_Chr5g0038791 RchiOBHm_Chr5g0038801 RchiOBHm_Chr5g0038831
rosa_laevigata RLG00000008815 RLG00000020213 RLG00000033850 RLG00000033864 RLG00000033875
rosa_multiflora Rmu_co8006804.1_g000001 Rmu_co8168012.1_g000001 Rmu_co8236409.1_g000001 Rmu_co8247247.1_g000001 Rmu_co8440391.1_g000001 Rmu_sc0000533.1_g000088 Rmu_sc0003198.1_g000005 Rmu_sc0003198.1_g000006 Rmu_sc0003198.1_g000007 Rmu_sc0003198.1_g000008 Rmu_sc0003198.1_g000013 Rmu_sc0005722.1_g000005 Rmu_sc0005722.1_g000007 Rmu_sc0005722.1_g000012 Rmu_sc0005722.1_g000013 Rmu_sc0005836.1_g000001 Rmu_sc0009149.1_g000006 Rmu_sc0009149.1_g000018 Rmu_sc0009149.1_g000020 Rmu_sc0017397.1_g000004 Rmu_sc0025071.1_g000001 Rmu_sc0032545.1_g000001 Rmu_sc0038346.1_g000001
rosa_roxburghii Rroxscaffold_1G00042150 Rroxscaffold_1G00042180 Rroxscaffold_1G00042230 Rroxscaffold_1G00042240 Rroxscaffold_1G00042260 Rroxscaffold_1G00042320 Rroxscaffold_1G00042330 Rroxscaffold_1G00042350 Rroxscaffold_1G00042360 Rroxscaffold_1G00042370 Rroxscaffold_1G00042400 Rroxscaffold_1G00042430 Rroxscaffold_1G00042440 Rroxscaffold_1G00042510 Rroxscaffold_1G00042580 Rroxscaffold_1G00042620
rosa_rugosa Rorug05G0172200 Rorug05G0172300 Rorug05G0172500 Rorug05G0173100 Rorug05G0173200.1 Rorug05G0173600 Rorug05G0173800 Rorug05G0174000 Rorug05G0174100 Rorug05G0174200 Rorug05G0174200 Rorug05G0174400 Rorug05G0174500 Rorug05G0174600 Rorug05G0174700 Rorug05G0174800
rosa_samantha Rh5AG259600 Rh5AG260200 Rh5AG260600 Rh5AG260800 Rh5AG261300 Rh5AG261400 Rh5AG261500 Rh5AG261700 Rh5AG261900 Rh5BG263600 Rh5BG264200 Rh5BG264500 Rh5BG264800 Rh5BG265100 Rh5BG265200 Rh5BG265500 Rh5BG265600 Rh5BG266000 Rh5CG295900 Rh5CG296700 Rh5CG296800 Rh5CG296900 Rh5CG297200 Rh5CG297700 Rh5CG297900 Rh5CG298100 Rh5CG298200 Rh5CG298300 Rh5CG298400 Rh5CG298500 Rh5CG298900 Rh5CG299200 Rh6DG125700
rosa_wichuraiana Rw0G001950 Rw0G001960 Rw0G013290 Rw5G024020 Rw5G024310 Rw5G024340 Rw5G024350 Rw5G024370 Rw5G024380 Rw5G024390 Rw5G024400 Rw5G024420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 838
Acc36I ACCTGC 2 cut(s) 1486, 1929
AccB1I GGYRCC 1 cut(s) 1017
AccI GTMKAC 1 cut(s) 1518
AccII CGCG 1 cut(s) 532
AccIII TCCGGA 1 cut(s) 330
AciI CCGC 4 cut(s) 532, 998, 1187, 1334
AclWI GGATC 1 cut(s) 1580
AcoI YGGCCR 1 cut(s) 893
AcsI RAATTY 1 cut(s) 602
AcyI GRCGYC 1 cut(s) 1018
AdeI CACNNNGTG 1 cut(s) 1195
AfaI GTAC 6 cut(s) 277, 951, 1168, 1181, 1280, 1488
AfiI CCNNNNNNNGG 1 cut(s) 68
AflIII ACRYGT 1 cut(s) 387
AjnI CCWGG 2 cut(s) 1228, 1268
AjuI GAANNNNNNNTTGG 2 cut(s) 329, 361
AluBI AGCT 9 cut(s) 145, 162, 290, 728, 812, 1427, 1691, 1822, 1905
AluI AGCT 9 cut(s) 145, 162, 290, 728, 812, 1427, 1691, 1822, 1905
Alw21I GWGCWC 2 cut(s) 255, 682
Alw26I GTCTC 3 cut(s) 66, 459, 1912
AlwI GGATC 1 cut(s) 1580
Aor13HI TCCGGA 1 cut(s) 330
AoxI GGCC 4 cut(s) 48, 893, 899, 1381
ApeKI GCWGC 3 cut(s) 809, 1935, 1971
ApoI RAATTY 1 cut(s) 602
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 5 cut(s) 37, 532, 748, 754, 1020
AspS9I GGNCC 2 cut(s) 223, 1094
AsuC2I CCSGG 1 cut(s) 1548
AsuHPI GGTGA 8 cut(s) 51, 260, 419, 569, 1156, 1395, 1688, 1814
AsuII TTCGAA 1 cut(s) 815
AsuNHI GCTAGC 3 cut(s) 1340, 1895, 1967
AvaII GGWCC 2 cut(s) 223, 1094
AxyI CCTNAGG 1 cut(s) 1139
BaeI ACNNNNGTAYC 2 cut(s) 1163, 1196
BanI GGYRCC 1 cut(s) 1017
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 796, 828
BauI CACGAG 1 cut(s) 1490
BbsI GAAGAC 1 cut(s) 245
Bbv12I GWGCWC 2 cut(s) 255, 682
BbvCI CCTCAGC 1 cut(s) 1901
BbvI GCAGC 3 cut(s) 821, 1947, 1983
BccI CCATC 6 cut(s) 178, 207, 314, 430, 933, 1324
BciT130I CCWGG 2 cut(s) 1230, 1270
BciVI GTATCC 1 cut(s) 1472
BclI TGATCA 3 cut(s) 559, 1693, 1699
BcnI CCSGG 1 cut(s) 1548
BcoDI GTCTC 3 cut(s) 66, 459, 1912
BfaI CTAG 8 cut(s) 660, 729, 1341, 1659, 1860, 1896, 1968, 2052
BfmI CTRYAG 1 cut(s) 1503
BfoI RGCGCY 1 cut(s) 1021
BfuAI ACCTGC 2 cut(s) 1486, 1929
BfuI GTATCC 1 cut(s) 1472
BisI GCNGC 3 cut(s) 810, 1936, 1972
BlpI GCTNAGC 1 cut(s) 921
BlsI GCNGC 3 cut(s) 811, 1937, 1973
BmcAI AGTACT 3 cut(s) 951, 1280, 1488
Bme1390I CCNGG 3 cut(s) 1230, 1270, 1548
Bme18I GGWCC 2 cut(s) 223, 1094
BmgT120I GGNCC 2 cut(s) 223, 1094
BmiI GGNNCC 2 cut(s) 1019, 1096
BmrFI CCNGG 3 cut(s) 1230, 1270, 1548
BmrI ACTGGG 2 cut(s) 145, 1092
BmsI GCATC 4 cut(s) 292, 1327, 1721, 1845
BmtI GCTAGC 3 cut(s) 1344, 1899, 1971
BmuI ACTGGG 2 cut(s) 145, 1092
BpiI GAAGAC 1 cut(s) 245
BplI GAGNNNNNCTC 2 cut(s) 919, 951
BpmI CTGGAG 2 cut(s) 87, 1857
Bpu10I CCTNAGC 2 cut(s) 141, 1901
Bpu1102I GCTNAGC 1 cut(s) 921
Bpu14I TTCGAA 1 cut(s) 815
BpuEI CTTGAG 3 cut(s) 542, 997, 1313
BpuMI CCSGG 1 cut(s) 1548
BsaBI GATNNNNATC 1 cut(s) 1698
BsaHI GRCGYC 1 cut(s) 1018
BsaI GGTCTC 2 cut(s) 66, 1912
BsaJI CCNNGG 5 cut(s) 51, 208, 271, 896, 1228
BsaWI WCCGGW 2 cut(s) 330, 1921
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 5 cut(s) 70, 151, 1049, 1098, 1874
Bse21I CCTNAGG 1 cut(s) 1139
Bse3DI GCAATG 3 cut(s) 711, 1029, 1855
Bse8I GATNNNNATC 1 cut(s) 1698
BseAI TCCGGA 1 cut(s) 330
BseBI CCWGG 2 cut(s) 1230, 1270
BseDI CCNNGG 5 cut(s) 51, 208, 271, 896, 1228
BseGI GGATG 5 cut(s) 218, 600, 1224, 1342, 1600
BseJI GATNNNNATC 1 cut(s) 1698
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMI GCAATG 3 cut(s) 711, 1029, 1855
BseMII CTCAG 6 cut(s) 132, 912, 1130, 1320, 1814, 1915
BseNI ACTGG 5 cut(s) 70, 151, 1049, 1098, 1874
BseRI GAGGAG 5 cut(s) 84, 126, 298, 814, 994
BseXI GCAGC 3 cut(s) 821, 1947, 1983
BseYI CCCAGC 1 cut(s) 567
BsgI GTGCAG 1 cut(s) 1514
Bsh1236I CGCG 1 cut(s) 532
BshFI GGCC 4 cut(s) 50, 895, 901, 1383
BshNI GGYRCC 1 cut(s) 1017
BsiHKAI GWGCWC 2 cut(s) 255, 682
BsiSI CCGG 3 cut(s) 331, 1548, 1922
BslFI GGGAC 2 cut(s) 748, 1080
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 3 cut(s) 66, 459, 1912
BsmFI GGGAC 2 cut(s) 748, 1080
BsmI GAATGC 1 cut(s) 1452
BsnI GGCC 4 cut(s) 50, 895, 901, 1383
Bso31I GGTCTC 2 cut(s) 66, 1912
Bsp119I TTCGAA 1 cut(s) 815
Bsp1286I GDGCHC 3 cut(s) 186, 255, 682
Bsp13I TCCGGA 1 cut(s) 330
Bsp143I GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
Bsp1720I GCTNAGC 1 cut(s) 921
Bsp19I CCATGG 1 cut(s) 51
BspACI CCGC 4 cut(s) 532, 998, 1187, 1334
BspANI GGCC 4 cut(s) 50, 895, 901, 1383
BspCNI CTCAG 6 cut(s) 133, 913, 1131, 1321, 1815, 1914
BspEI TCCGGA 1 cut(s) 330
BspFNI CGCG 1 cut(s) 532
BspHI TCATGA 2 cut(s) 606, 1696
BspLI GGNNCC 2 cut(s) 1019, 1096
BspMAI CTGCAG 1 cut(s) 1507
BspMI ACCTGC 2 cut(s) 1486, 1929
BspOI GCTAGC 3 cut(s) 1344, 1899, 1971
BspPI GGATC 1 cut(s) 1580
BspQI GCTCTTC 1 cut(s) 1912
BspT104I TTCGAA 1 cut(s) 815
BspT107I GGYRCC 1 cut(s) 1017
BspTNI GGTCTC 2 cut(s) 66, 1912
BsrDI GCAATG 3 cut(s) 711, 1029, 1855
BsrI ACTGG 5 cut(s) 70, 151, 1049, 1098, 1874
BssECI CCNNGG 5 cut(s) 51, 208, 271, 896, 1228
BssMI GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
BssNAI GTATAC 1 cut(s) 1519
BssNI GRCGYC 1 cut(s) 1018
BssSI CACGAG 1 cut(s) 1490
BssT1I CCWWGG 3 cut(s) 51, 271, 896
Bst1107I GTATAC 1 cut(s) 1519
Bst2BI CACGAG 1 cut(s) 1490
Bst2UI CCWGG 2 cut(s) 1230, 1270
Bst4CI ACNGT 2 cut(s) 1651, 1676
Bst6I CTCTTC 2 cut(s) 791, 1912
BstACI GRCGYC 1 cut(s) 1018
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 6 cut(s) 750, 756, 1342, 1897, 1933, 1969
BstDEI CTNAG 8 cut(s) 141, 500, 921, 1139, 1329, 1823, 1901, 2010
BstDSI CCRYGG 2 cut(s) 51, 208
BstF5I GGATG 5 cut(s) 218, 600, 1224, 1342, 1600
BstFNI CGCG 1 cut(s) 532
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 5 cut(s) 37, 532, 748, 754, 1020
BstKTI GATC 6 cut(s) 562, 837, 1219, 1588, 1696, 1702
BstMAI GTCTC 3 cut(s) 66, 459, 1912
BstMBI GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
BstMWI GCNNNNNNNGC 2 cut(s) 764, 1424
BstNI CCWGG 2 cut(s) 1230, 1270
BstSCI CCNGG 3 cut(s) 1228, 1268, 1546
BstSFI CTRYAG 1 cut(s) 1503
BstUI CGCG 1 cut(s) 532
BstV1I GCAGC 3 cut(s) 821, 1947, 1983
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 1 cut(s) 1585
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 1 cut(s) 1585
BstZ17I GTATAC 1 cut(s) 1519
Bsu36I CCTNAGG 1 cut(s) 1139
BsuI GTATCC 1 cut(s) 1472
BsuRI GGCC 4 cut(s) 50, 895, 901, 1383
BtgI CCRYGG 2 cut(s) 51, 208
BtsCI GGATG 5 cut(s) 218, 600, 1224, 1342, 1600
BtsIMutI CAGTG 3 cut(s) 158, 582, 696
BveI ACCTGC 2 cut(s) 1486, 1929
Cac8I GCNNGC 6 cut(s) 750, 756, 1342, 1897, 1933, 1969
CciI TCATGA 2 cut(s) 606, 1696
CfoI GCGC 5 cut(s) 37, 532, 748, 754, 1020
Cfr13I GGNCC 2 cut(s) 223, 1094
Csp6I GTAC 6 cut(s) 276, 950, 1167, 1180, 1279, 1487
CviAII CATG 9 cut(s) 25, 52, 279, 319, 607, 632, 674, 1375, 1697
CviQI GTAC 6 cut(s) 276, 950, 1167, 1180, 1279, 1487
DdeI CTNAG 8 cut(s) 141, 500, 921, 1139, 1329, 1823, 1901, 2010
DinI GGCGCC 1 cut(s) 1019
DpnI GATC 6 cut(s) 561, 836, 1218, 1587, 1695, 1701
DpnII GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
DraIII CACNNNGTG 1 cut(s) 1195
DrdI GACNNNNNNGTC 1 cut(s) 838
DseDI GACNNNNNNGTC 1 cut(s) 838
EaeI YGGCCR 1 cut(s) 893
Eam1104I CTCTTC 2 cut(s) 791, 1912
EarI CTCTTC 2 cut(s) 791, 1912
EciI GGCGGA 1 cut(s) 1349
Eco130I CCWWGG 3 cut(s) 51, 271, 896
Eco147I AGGCCT 1 cut(s) 1383
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 2 cut(s) 66, 1912
Eco47I GGWCC 2 cut(s) 223, 1094
Eco81I CCTNAGG 1 cut(s) 1139
EcoRI GAATTC 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 1228, 1268
EcoT14I CCWWGG 3 cut(s) 51, 271, 896
EcoT38I GRGCYC 1 cut(s) 186
EgeI GGCGCC 1 cut(s) 1019
EheI GGCGCC 1 cut(s) 1019
ErhI CCWWGG 3 cut(s) 51, 271, 896
FaeI CATG 9 cut(s) 28, 55, 282, 322, 610, 635, 677, 1378, 1700
FalI AAGNNNNNCTT 2 cut(s) 1265, 1297
FaqI GGGAC 2 cut(s) 748, 1080
FatI CATG 9 cut(s) 24, 51, 278, 318, 606, 631, 673, 1374, 1696
FauI CCCGC 1 cut(s) 991
FbaI TGATCA 3 cut(s) 559, 1693, 1699
FblI GTMKAC 1 cut(s) 1518
Fnu4HI GCNGC 3 cut(s) 810, 1936, 1972
FokI GGATG 5 cut(s) 225, 607, 1211, 1349, 1607
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 3 cut(s) 810, 1936, 1972
FspBI CTAG 8 cut(s) 660, 729, 1341, 1659, 1860, 1896, 1968, 2052
GlaI GCGC 5 cut(s) 36, 531, 747, 753, 1019
GluI GCNGC 3 cut(s) 810, 1936, 1972
GsaI CCCAGC 1 cut(s) 571
GsuI CTGGAG 2 cut(s) 87, 1857
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 4 cut(s) 50, 895, 901, 1383
HapII CCGG 3 cut(s) 331, 1548, 1922
HhaI GCGC 5 cut(s) 37, 532, 748, 754, 1020
Hin1I GRCGYC 1 cut(s) 1018
Hin1II CATG 9 cut(s) 28, 55, 282, 322, 610, 635, 677, 1378, 1700
Hin6I GCGC 5 cut(s) 35, 530, 746, 752, 1018
HinP1I GCGC 5 cut(s) 35, 530, 746, 752, 1018
HinfI GANTC 9 cut(s) 12, 294, 467, 736, 992, 1249, 1370, 1532, 1551
HpaII CCGG 3 cut(s) 331, 1548, 1922
HphI GGTGA 8 cut(s) 51, 260, 419, 569, 1156, 1395, 1688, 1814
Hpy166II GTNNAC 2 cut(s) 694, 1519
Hpy188I TCNGA 7 cut(s) 84, 741, 914, 1254, 1330, 1618, 1756
Hpy188III TCNNGA 8 cut(s) 140, 200, 331, 485, 607, 884, 1220, 1697
Hpy8I GTNNAC 2 cut(s) 694, 1519
Hpy99I CGWCG 1 cut(s) 1676
HpyAV CCTTC 9 cut(s) 529, 592, 998, 1066, 1193, 1360, 1471, 1503, 1517
HpyCH4III ACNGT 2 cut(s) 1651, 1676
HpyCH4IV ACGT 1 cut(s) 389
HpyCH4V TGCA 9 cut(s) 4, 716, 767, 809, 1204, 1495, 1505, 1724, 1935
HpyF10VI GCNNNNNNNGC 2 cut(s) 764, 1424
HpyF3I CTNAG 8 cut(s) 141, 500, 921, 1139, 1329, 1823, 1901, 2010
HpySE526I ACGT 1 cut(s) 389
Hsp92I GRCGYC 1 cut(s) 1018
Hsp92II CATG 9 cut(s) 28, 55, 282, 322, 610, 635, 677, 1378, 1700
HspAI GCGC 5 cut(s) 35, 530, 746, 752, 1018
KasI GGCGCC 1 cut(s) 1017
Kpn2I TCCGGA 1 cut(s) 330
Ksp22I TGATCA 3 cut(s) 559, 1693, 1699
Kzo9I GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
LguI GCTCTTC 1 cut(s) 1912
LmnI GCTCC 4 cut(s) 167, 250, 628, 1246
Lsp1109I GCAGC 3 cut(s) 821, 1947, 1983
LweI GCATC 4 cut(s) 292, 1327, 1721, 1845
MaeI CTAG 8 cut(s) 660, 729, 1341, 1659, 1860, 1896, 1968, 2052
MaeII ACGT 1 cut(s) 389
MaeIII GTNAC 7 cut(s) 377, 829, 1211, 1401, 1792, 1995, 2014
MalI GATC 6 cut(s) 561, 836, 1218, 1587, 1695, 1701
MboI GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
MboII GAAGA 9 cut(s) 250, 301, 349, 440, 808, 1121, 1648, 1707, 1899
MfeI CAATTG 1 cut(s) 1719
MflI RGATCY 1 cut(s) 1585
MhlI GDGCHC 3 cut(s) 186, 255, 682
MluCI AATT 9 cut(s) 191, 313, 602, 685, 717, 1115, 1205, 1629, 1719
Mly113I GGCGCC 1 cut(s) 1018
MlyI GAGTC 2 cut(s) 461, 730
MmeI TCCRAC 3 cut(s) 949, 1138, 1561
MroI TCCGGA 1 cut(s) 330
MroXI GAANNNNTTC 1 cut(s) 602
MseI TTAA 5 cut(s) 263, 1355, 1740, 2004, 2045
MspA1I CMGCKG 1 cut(s) 1691
MspI CCGG 3 cut(s) 331, 1548, 1922
MspR9I CCNGG 3 cut(s) 1230, 1270, 1548
MunI CAATTG 1 cut(s) 1719
Mva1269I GAATGC 1 cut(s) 1452
MvaI CCWGG 2 cut(s) 1230, 1270
MvnI CGCG 1 cut(s) 532
MwoI GCNNNNNNNGC 2 cut(s) 764, 1424
NarI GGCGCC 1 cut(s) 1018
NciI CCSGG 1 cut(s) 1548
NcoI CCATGG 1 cut(s) 51
NdeII GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
NheI GCTAGC 3 cut(s) 1340, 1895, 1967
NlaIII CATG 9 cut(s) 28, 55, 282, 322, 610, 635, 677, 1378, 1700
NlaIV GGNNCC 2 cut(s) 1019, 1096
NmeAIII GCCGAG 1 cut(s) 951
NmuCI GTSAC 5 cut(s) 377, 829, 1401, 1792, 1995
NspV TTCGAA 1 cut(s) 815
PagI TCATGA 2 cut(s) 606, 1696
PceI AGGCCT 1 cut(s) 1383
PciSI GCTCTTC 1 cut(s) 1912
PctI GAATGC 1 cut(s) 1452
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 7 cut(s) 12, 294, 992, 1249, 1370, 1532, 1551
PfoI TCCNGGA 1 cut(s) 1546
PkrI GCNGC 3 cut(s) 811, 1937, 1973
PleI GAGTC 2 cut(s) 461, 730
PluTI GGCGCC 1 cut(s) 1021
PpsI GAGTC 2 cut(s) 461, 730
Psp6I CCWGG 2 cut(s) 1228, 1268
PspFI CCCAGC 1 cut(s) 567
PspGI CCWGG 2 cut(s) 1228, 1268
PspN4I GGNNCC 2 cut(s) 1019, 1096
PspPI GGNCC 2 cut(s) 223, 1094
PstI CTGCAG 1 cut(s) 1507
PsuI RGATCY 1 cut(s) 1585
PvuII CAGCTG 1 cut(s) 1691
RsaI GTAC 6 cut(s) 277, 951, 1168, 1181, 1280, 1488
RsaNI GTAC 6 cut(s) 276, 950, 1167, 1180, 1279, 1487
SapI GCTCTTC 1 cut(s) 1912
SaqAI TTAA 5 cut(s) 263, 1355, 1740, 2004, 2045
SatI GCNGC 3 cut(s) 810, 1936, 1972
Sau3AI GATC 6 cut(s) 559, 834, 1216, 1585, 1693, 1699
Sau96I GGNCC 2 cut(s) 223, 1094
ScaI AGTACT 3 cut(s) 951, 1280, 1488
SchI GAGTC 2 cut(s) 461, 730
ScrFI CCNGG 3 cut(s) 1230, 1270, 1548
SduI GDGCHC 3 cut(s) 186, 255, 682
SfaNI GCATC 4 cut(s) 292, 1327, 1721, 1845
SfcI CTRYAG 1 cut(s) 1503
SfoI GGCGCC 1 cut(s) 1019
SfuI TTCGAA 1 cut(s) 815
SinI GGWCC 2 cut(s) 223, 1094
SmlI CTYRAG 3 cut(s) 521, 976, 1292
SmoI CTYRAG 3 cut(s) 521, 976, 1292
Sse9I AATT 9 cut(s) 191, 313, 602, 685, 717, 1115, 1205, 1629, 1719
SseBI AGGCCT 1 cut(s) 1383
SsiI CCGC 4 cut(s) 532, 998, 1187, 1334
SspDI GGCGCC 1 cut(s) 1017
SspI AATATT 4 cut(s) 964, 1305, 1733, 1761
SspMI CTAG 8 cut(s) 660, 729, 1341, 1659, 1860, 1896, 1968, 2052
StuI AGGCCT 1 cut(s) 1383
StyD4I CCNGG 3 cut(s) 1228, 1268, 1546
StyI CCWWGG 3 cut(s) 51, 271, 896
TaaI ACNGT 2 cut(s) 1651, 1676
TaiI ACGT 1 cut(s) 392
TaqI TCGA 4 cut(s) 815, 937, 1130, 1319
TasI AATT 9 cut(s) 191, 313, 602, 685, 717, 1115, 1205, 1629, 1719
TatI WGTACW 3 cut(s) 949, 1278, 1486
TfiI GAWTC 7 cut(s) 12, 294, 992, 1249, 1370, 1532, 1551
Tru1I TTAA 5 cut(s) 263, 1355, 1740, 2004, 2045
Tru9I TTAA 5 cut(s) 263, 1355, 1740, 2004, 2045
TscAI CASTG 3 cut(s) 158, 589, 696
TseFI GTSAC 5 cut(s) 377, 829, 1401, 1792, 1995
TseI GCWGC 3 cut(s) 809, 1935, 1971
Tsp45I GTSAC 5 cut(s) 377, 829, 1401, 1792, 1995
TspGWI ACGGA 2 cut(s) 197, 1454
TspRI CASTG 3 cut(s) 158, 589, 696
VpaK11BI GGWCC 2 cut(s) 223, 1094
XapI RAATTY 1 cut(s) 602
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XmiI GTMKAC 1 cut(s) 1518
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 8 cut(s) 660, 729, 1341, 1659, 1860, 1896, 1968, 2052
ZrmI AGTACT 3 cut(s) 951, 1280, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.